| { | |
| "rows_total": 1688, | |
| "rows_by_split": { | |
| "train": 338, | |
| "validation": 42, | |
| "test": 42, | |
| "train_random": 338, | |
| "validation_random": 42, | |
| "test_random": 42, | |
| "train_stratified": 338, | |
| "validation_stratified": 42, | |
| "test_stratified": 42, | |
| "train_cluster": 338, | |
| "validation_cluster": 42, | |
| "test_cluster": 42 | |
| }, | |
| "columns": [ | |
| "id", | |
| "sequence", | |
| "targets", | |
| "split" | |
| ], | |
| "seqkit_stats": [ | |
| { | |
| "file": "test.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 30624, | |
| "min_len": 120, | |
| "avg_len": 729.1, | |
| "max_len": 2768, | |
| "Q1": 312.0, | |
| "Q2": 570.5, | |
| "Q3": 1119.0, | |
| "sum_gap": 0, | |
| "sum_n": 1152 | |
| }, | |
| { | |
| "file": "test_cluster.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 28285, | |
| "min_len": 147, | |
| "avg_len": 673.5, | |
| "max_len": 2136, | |
| "Q1": 374.0, | |
| "Q2": 530.5, | |
| "Q3": 761.0, | |
| "sum_gap": 0, | |
| "sum_n": 1086 | |
| }, | |
| { | |
| "file": "test_random.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 37168, | |
| "min_len": 75, | |
| "avg_len": 885.0, | |
| "max_len": 5207, | |
| "Q1": 326.0, | |
| "Q2": 688.5, | |
| "Q3": 1028.0, | |
| "sum_gap": 0, | |
| "sum_n": 1471 | |
| }, | |
| { | |
| "file": "test_stratified.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 22574, | |
| "min_len": 70, | |
| "avg_len": 537.5, | |
| "max_len": 1690, | |
| "Q1": 248.0, | |
| "Q2": 497.0, | |
| "Q3": 727.0, | |
| "sum_gap": 0, | |
| "sum_n": 883 | |
| }, | |
| { | |
| "file": "train.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 338, | |
| "sum_len": 276511, | |
| "min_len": 24, | |
| "avg_len": 818.1, | |
| "max_len": 14507, | |
| "Q1": 318.0, | |
| "Q2": 539.0, | |
| "Q3": 897.0, | |
| "sum_gap": 0, | |
| "sum_n": 10636 | |
| }, | |
| { | |
| "file": "train_cluster.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 338, | |
| "sum_len": 271287, | |
| "min_len": 24, | |
| "avg_len": 802.6, | |
| "max_len": 14507, | |
| "Q1": 312.0, | |
| "Q2": 531.5, | |
| "Q3": 898.0, | |
| "sum_gap": 0, | |
| "sum_n": 10414 | |
| }, | |
| { | |
| "file": "train_random.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 338, | |
| "sum_len": 245123, | |
| "min_len": 24, | |
| "avg_len": 725.2, | |
| "max_len": 5183, | |
| "Q1": 312.0, | |
| "Q2": 521.0, | |
| "Q3": 866.0, | |
| "sum_gap": 0, | |
| "sum_n": 9570 | |
| }, | |
| { | |
| "file": "train_stratified.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 338, | |
| "sum_len": 278478, | |
| "min_len": 24, | |
| "avg_len": 823.9, | |
| "max_len": 14507, | |
| "Q1": 326.0, | |
| "Q2": 543.0, | |
| "Q3": 968.0, | |
| "sum_gap": 0, | |
| "sum_n": 10691 | |
| }, | |
| { | |
| "file": "validation.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 24298, | |
| "min_len": 108, | |
| "avg_len": 578.5, | |
| "max_len": 3224, | |
| "Q1": 305.0, | |
| "Q2": 471.0, | |
| "Q3": 683.0, | |
| "sum_gap": 0, | |
| "sum_n": 883 | |
| }, | |
| { | |
| "file": "validation_cluster.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 31861, | |
| "min_len": 117, | |
| "avg_len": 758.6, | |
| "max_len": 5207, | |
| "Q1": 314.0, | |
| "Q2": 518.5, | |
| "Q3": 897.0, | |
| "sum_gap": 0, | |
| "sum_n": 1171 | |
| }, | |
| { | |
| "file": "validation_random.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 49142, | |
| "min_len": 76, | |
| "avg_len": 1170.0, | |
| "max_len": 14507, | |
| "Q1": 339.0, | |
| "Q2": 525.0, | |
| "Q3": 1097.0, | |
| "sum_gap": 0, | |
| "sum_n": 1630 | |
| }, | |
| { | |
| "file": "validation_stratified.fasta.gz", | |
| "type": "Protein", | |
| "num_seqs": 42, | |
| "sum_len": 30381, | |
| "min_len": 58, | |
| "avg_len": 723.4, | |
| "max_len": 4834, | |
| "Q1": 307.0, | |
| "Q2": 434.5, | |
| "Q3": 802.0, | |
| "sum_gap": 0, | |
| "sum_n": 1097 | |
| }, | |
| { | |
| "file": "overall", | |
| "type": "Protein", | |
| "num_seqs": 1688, | |
| "sum_len": 1325732, | |
| "min_len": 24, | |
| "avg_len": 785.4, | |
| "max_len": 14507, | |
| "Q1": 315.0, | |
| "Q2": 531.0, | |
| "Q3": 882.0, | |
| "sum_gap": 0, | |
| "sum_n": 50684 | |
| } | |
| ] | |
| } |