#!/usr/bin/env Rscript

file_arg <- grep("^--file=", commandArgs(FALSE), value = TRUE)
script_path <- sub("^--file=", "", file_arg[[1]])
source(file.path(dirname(normalizePath(script_path, mustWork = FALSE)), "common.R"))

root <- set_replication_root()
verify_hash <- !parse_env_flag("IMAGEDECONFOUND_SKIP_HASH", default = FALSE)
summary <- verify_bundle(verify_hash = verify_hash)

cat("\nBundle summary\n")
cat("Root: ", summary$root, "\n", sep = "")
cat("Processed result files: ", summary$results_processed_n, "\n", sep = "")
cat("Manuscript figure assets: ", summary$manuscript_fig_n, "\n", sep = "")
cat("Per-run CSV directories:\n")
for (name in names(summary$per_run_csv_counts)) {
  cat("  - ", name, ": ", summary$per_run_csv_counts[[name]], "\n", sep = "")
}