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Upload embpy static embedding package (12 prefixes)
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{
"embpy_static_embedding": {
"description": "STRING node2vec PPI embedding for human proteins, species 9606, 128d.",
"entity_type": "protein",
"id_harmonization": {
"alias_columns": [
"ensembl_protein_id"
],
"enabled": false,
"n_duplicate_canonical_ids": 0,
"n_unresolved_ids": 0,
"organism": "human",
"source_id_type": "string_protein_id",
"target_id_type": "source",
"unresolved_id_policy": "drop"
},
"id_key": "entity_id",
"id_type": "string_protein_id",
"index_columns": [
"entity_id",
"ensembl_protein_id"
],
"matrix_key": "matrix",
"model_key": "string_node2vec_9606",
"n_dims": 128,
"n_entities": 19622,
"organism": "human",
"schema_version": "embpy.static_embedding_package.v1",
"source": {
"name": "9606.h5",
"path": "/Users/grpinto/Documents/embpy/data/static_embeddings/precomputed_embeddings_string/node2vec/node2vec/9606.h5",
"size_bytes": 5486002,
"suffix": ".h5"
},
"source_id_type": "string_protein_id",
"storage": "zarr",
"target_id_type": "source",
"values_path": "values.zarr"
}
}