thewall commited on
Commit
1f225f3
·
1 Parent(s): 6cb2adb

Update deepbindweight.py

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Files changed (1) hide show
  1. deepbindweight.py +5 -3
deepbindweight.py CHANGED
@@ -16,7 +16,7 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
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  DeepBindWeightConfig(name=key) for key in ID_POOL
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  ]
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- DEFAULT_CONFIG_NAME = "D00328.003"
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  def _info(self):
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  return datasets.DatasetInfo(
@@ -32,10 +32,12 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
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  )
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  def _split_generators(self, dl_manager):
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- param_url = f"{URL}/params/{self.config.name}.txt"
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  selex_url = f"{URL}/ERP001824-deepbind.xlsx"
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  tf_url = f"{URL}/ERP001824-UniprotKB.xlsx"
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- downloaded_files = dl_manager.download([param_url, selex_url, tf_url])
 
 
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  return [
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  datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files}),
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  ]
 
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  DeepBindWeightConfig(name=key) for key in ID_POOL
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  ]
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+ DEFAULT_CONFIG_NAME = "params"
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  def _info(self):
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  return datasets.DatasetInfo(
 
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  )
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  def _split_generators(self, dl_manager):
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+ param_url = f"{URL}/params.tar.gz"
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  selex_url = f"{URL}/ERP001824-deepbind.xlsx"
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  tf_url = f"{URL}/ERP001824-UniprotKB.xlsx"
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+
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+ downloaded_files = [dl_manager.download_and_extract(param_url)]
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+ downloaded_files.extend(dl_manager.download([selex_url, tf_url]))
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  return [
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  datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files}),
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  ]