Update deepbindweight.py
Browse files- deepbindweight.py +9 -6
deepbindweight.py
CHANGED
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@@ -8,7 +8,7 @@ import datasets
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logger = datasets.logging.get_logger(__name__)
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ID_POOL = ()
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URL = "https://huggingface.co/datasets/thewall/DeepBindWeight/resolve/main/
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class DeepBindWeightConfig(datasets.BuilderConfig):
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pass
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@@ -26,16 +26,17 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
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features=datasets.Features(
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{
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"config": datasets.Value("string"),
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"existed": datasets.Value("bool")
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}
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),
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homepage="http://tools.genes.toronto.edu/deepbind",
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)
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def _split_generators(self, dl_manager):
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downloaded_files = dl_manager.download_and_extract(
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return [
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datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files}),
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]
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@@ -43,7 +44,9 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
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def _generate_examples(self, filepath):
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"""This function returns the examples in the raw (text) form."""
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logger.info("generating examples from = %s", filepath)
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yield 0, {"config": filepath,
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if __name__=="__main__":
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logger = datasets.logging.get_logger(__name__)
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ID_POOL = ()
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URL = "https://huggingface.co/datasets/thewall/DeepBindWeight/resolve/main/"
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class DeepBindWeightConfig(datasets.BuilderConfig):
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pass
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features=datasets.Features(
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{
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"config": datasets.Value("string"),
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"existed": datasets.Value("bool"),
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"table": datasets.Value("string")
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}
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),
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homepage="http://tools.genes.toronto.edu/deepbind",
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)
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def _split_generators(self, dl_manager):
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param_url = f"{URL}/params/{self.config.name}.txt"
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table_url = f"{URL}/ERP001824-deepbind.xlsx"
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downloaded_files = dl_manager.download_and_extract([param_url, table_url])
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return [
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datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files}),
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]
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def _generate_examples(self, filepath):
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"""This function returns the examples in the raw (text) form."""
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logger.info("generating examples from = %s", filepath)
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yield 0, {"config": filepath[0],
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"existed": os.path.exists(filepath[0]) and os.path.exists(filepath[1]),
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"table": filepath[1]}
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if __name__=="__main__":
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