Update deepbindweight.py

deepbindweight.py

@@ -7,6 +7,7 @@ logger = datasets.logging.get_logger(__name__)
 ID_POOL = ()
 URL = "https://huggingface.co/datasets/thewall/DeepBindWeight/resolve/main"
 
+
 class DeepBindWeightConfig(datasets.BuilderConfig):
     pass
 
@@ -35,8 +36,9 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
         param_url = f"{URL}/params.tar.gz"
         selex_url = f"{URL}/ERP001824-deepbind.xlsx"
         tf_url = f"{URL}/ERP001824-UniprotKB.xlsx"
-
-        downloaded_files = [os.path.join(f"{dl_manager.download_and_extract(param_url)}", "params")]
+        aptani2_url = f"{URL}/aptani2_config.tar.gz"
+        downloaded_files = [os.path.join(f"{dl_manager.download_and_extract(param_url)}", "params"),
+                            f"{dl_manager.download_and_extract(aptani2_url)}"]
         downloaded_files.extend(dl_manager.download([selex_url, tf_url]))
         return [
             datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": downloaded_files}),
@@ -46,7 +48,8 @@ class DeepBindWeight(datasets.GeneratorBasedBuilder):
         """This function returns the examples in the raw (text) form."""
         logger.info("generating examples from = %s", filepath)
         yield 0, {"config": filepath[0],
-                  "existed": os.path.exists(filepath[0]) and os.path.exists(filepath[1]) and os.path.exists(filepath[2]),
+                  "existed": os.path.exists(filepath[0]) and os.path.exists(filepath[1])
+                             and os.path.exists(filepath[2]) and os.path.exists(filepath[4]),
                   "selex": filepath[1],
                   'tf': filepath[2]}
 
@@ -55,4 +58,3 @@ if __name__=="__main__":
     from datasets import load_dataset
     dataset = load_dataset("thewall/deepbindweight", split="all")
     # dataset.push_to_hub("thewall/DeepBindWeight")
-