Update deepbind.py
Browse files- deepbind.py +1 -1
deepbind.py
CHANGED
|
@@ -143,7 +143,7 @@ class DeepBind(nn.Module):
|
|
| 143 |
if file is None:
|
| 144 |
config = datasets.load_dataset(path="thewall/deepbindweight", split="all")
|
| 145 |
if ID is None:
|
| 146 |
-
data = pd.read_excel(config[0]['
|
| 147 |
ID = data.loc[sra_id]["ID"]
|
| 148 |
file = datasets.load_dataset(path="thewall/deepbindweight", name=ID, split="all")[0]['config']
|
| 149 |
keys = [("reverse_complement", lambda x:bool(eval(x))), ("num_detectors", int), ("detector_len", int),
|
|
|
|
| 143 |
if file is None:
|
| 144 |
config = datasets.load_dataset(path="thewall/deepbindweight", split="all")
|
| 145 |
if ID is None:
|
| 146 |
+
data = pd.read_excel(config[0]['selex'], index_col=0)
|
| 147 |
ID = data.loc[sra_id]["ID"]
|
| 148 |
file = datasets.load_dataset(path="thewall/deepbindweight", name=ID, split="all")[0]['config']
|
| 149 |
keys = [("reverse_complement", lambda x:bool(eval(x))), ("num_detectors", int), ("detector_len", int),
|