diff --git a/params/D00611.001.txt b/params/D00611.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..575e0bac118acffdd6606af8f5b467d0ba16c7b4 --- /dev/null +++ b/params/D00611.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.997667253e-01,-1.878944188e-01,-4.257878959e-01,-7.499724030e-01,-3.190732896e-01,-5.992897153e-01,-3.776545525e-01,-1.714971215e-01,-5.141003728e-01,-5.155781507e-01,-2.107462138e-01,-1.858316064e-01,-3.813276589e-01,-7.845205069e-01,-3.246046603e-01,-5.796521902e-01 +weights1 = 3.500906825e-01,4.492471218e-01,6.220597029e-01,1.119536161e+00,4.604600072e-01,7.498424649e-01,6.219470501e-01,4.215303361e-01,7.054842114e-01,7.255554795e-01,3.999420404e-01,4.389185011e-01,5.981925726e-01,1.111759663e+00,5.550811291e-01,8.451825380e-01 +biases1 = -1.062125206e+00 +weights2 = +biases2 = diff --git a/params/D00612.001.txt b/params/D00612.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..fa7dcff0c91efec19848d4aa2d84aa9eb05d3ef6 --- /dev/null +++ b/params/D00612.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -2.413176447e-01,1.914251223e-02,-4.793341085e-02,-1.583866589e-02,-5.830027461e-01,-3.003226593e-03,-2.586969733e-02,-8.023820072e-02,-4.496116191e-03,3.851011768e-02,-1.072461437e-02,-5.252488772e-04,-3.185419738e-02,4.207755625e-02,-5.741787329e-02,-9.290457517e-02,-1.308867931e-01,-2.127595711e-03,9.479813278e-03,8.121210158e-06,8.667851985e-02,-2.995786816e-02,-5.464703008e-06,-6.321119610e-03,0.000000000e+00,-9.489130229e-03,-5.150459707e-02,0.000000000e+00,-3.926863968e-01,6.771738082e-02,0.000000000e+00,-3.897652030e-03 +weights2 = -4.953166544e-01,2.322697639e-01,-9.192772955e-02,-5.670498312e-02,-6.923288107e-01,4.240767360e-01,-1.951755024e-02,-1.513423473e-01,-1.509409770e-02,-8.211399615e-02,4.777866602e-02,6.403713487e-03,-2.599899843e-02,-3.728614748e-01,-3.821190000e-01,-1.730229557e-01,9.867550135e-01,2.350583300e-02,7.703870535e-01,1.275834716e-10,-1.502515376e-01,-5.572513491e-02,4.930661619e-02,-1.071073487e-02,-6.853347644e-03,-1.574268565e-02,-3.989833593e-01,2.743793651e-03,-5.437370539e-01,-3.440011144e-01,-4.910309985e-02,5.513007194e-02 +biases2 = 2.397226542e-01 diff --git a/params/D00613.002.txt b/params/D00613.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..8dc14c74843c1358cdcdbd59c0ec14d2f6391f47 --- /dev/null +++ b/params/D00613.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -9.397250414e-02,-1.878832281e-01,-1.095819175e-01,-3.172043478e-03,-1.010067463e-01,-1.293376088e-01,-2.322062850e-01,-6.351931095e-01,-8.123161933e-06,-3.250469717e-06,-7.256960869e-02,-3.851284683e-01,-4.969267249e-01,-8.214836271e-06,-3.828625083e-01,-1.055425400e-05 +weights1 = 2.321397066e-01,3.349272907e-01,3.097850680e-01,1.497332454e-01,2.753988504e-01,3.102765679e-01,4.294064641e-01,7.784780264e-01,-4.856870461e-10,-4.584015945e-10,1.906063855e-01,5.084626079e-01,6.389872432e-01,5.314126361e-10,4.982143342e-01,-1.386315396e-09 +biases1 = -3.096613288e-01 +weights2 = +biases2 = diff --git a/params/D00614.001.txt b/params/D00614.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..9f8012efde988746fe50be38379dd54659f4100d --- /dev/null +++ b/params/D00614.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.391796152e-04,-8.872185946e-01,-1.189491086e-04,-3.736283183e-01,-3.891217639e-04,-1.277883712e-04,-1.058384369e-04,-4.932195246e-01,-1.060540795e+00,-9.792194366e-01,-1.317200222e-04,-3.892065287e-01,-8.748930693e-01,-1.169605384e-04,-9.565055966e-01,-1.483108063e-04 +weights1 = -8.390605217e-04,8.755941391e-01,-7.567703869e-05,2.667080462e-01,-5.836107885e-04,-2.150590299e-04,-5.655428395e-04,3.099154234e-01,1.029961467e+00,1.010906458e+00,-3.144656876e-05,2.765578926e-01,8.983654976e-01,-2.971277572e-04,1.016877770e+00,-1.854960865e-04 +biases1 = -9.274870902e-02 +weights2 = +biases2 = diff --git a/params/D00615.001.txt b/params/D00615.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..494d35522b1d5c99d43af24e599199b7c1dd5d50 --- /dev/null +++ b/params/D00615.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -8.754499722e-04,-1.091213431e-03,-5.737622976e-01,-9.633125155e-04,-3.031931352e-03,-2.306356764e-04,-7.638810785e-04,-3.928356767e-01,-7.920462638e-02,-2.864968479e-01,-4.377678931e-01,-1.228504698e-03,-2.620975077e-01,-7.384056449e-01,1.152877696e-02,-5.317969918e-01 +weights1 = -1.187110357e-07,-1.551805440e-07,5.094435811e-01,-1.856547982e-07,-1.330117385e-07,1.440246393e-07,-1.271764294e-08,3.449437022e-01,1.271531880e-01,2.568348944e-01,3.807239234e-01,2.088532227e-07,2.969731987e-01,6.916017532e-01,-7.337237912e-05,5.256597400e-01 +biases1 = -1.116954163e-01 +weights2 = +biases2 = diff --git a/params/D00616.002.txt b/params/D00616.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..fe51ccf3e22d56d4aa0b43f287fbf59fa5430533 --- /dev/null +++ b/params/D00616.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -4.743806645e-02,-1.541870236e-01,-6.766049773e-04,-1.610707790e-01,-3.788771108e-02,-2.959636748e-01,-1.362016499e-01,-1.172970086e-01,-4.022996426e-01,8.148674387e-04,-1.442694545e+00,-7.166046184e-03,-8.967756480e-02,-5.172851309e-02,-3.140344918e-01,-7.359549869e-03,-8.230173588e-02,-1.126289517e-01,2.982138249e-04,-2.769196332e-01,-2.229485065e-01,-3.514054464e-03,-1.478987932e-02,-1.064356118e-01,-1.205285043e-01,-2.960819006e-02,-6.135499105e-03,5.660672905e-04,-1.897456199e-01,-4.098083377e-01,-2.569540218e-02,-6.617802661e-03 +weights2 = 1.372493953e-01,4.950321615e-01,-2.774224430e-02,4.588774741e-01,1.285820007e-01,8.938962817e-01,4.128115773e-01,3.798391223e-01,1.220927358e+00,-4.116618657e-04,-1.991556883e+00,-1.276322901e-01,2.699611783e-01,1.584117711e-01,9.721296430e-01,-5.145628005e-02,2.991120219e-01,3.433545828e-01,5.070648622e-04,8.746966720e-01,7.138561606e-01,-5.598988384e-02,5.841821432e-02,3.380702734e-01,3.573856652e-01,-2.166958898e-01,-2.407780588e-01,-3.715654137e-03,5.593180656e-01,1.226646543e+00,9.234669805e-02,-1.065877005e-01 +biases2 = 3.126572119e-04 diff --git a/params/D00617.002.txt b/params/D00617.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..dcbbc2f0118c83137b89ca4835701dbfcc7697d5 --- /dev/null +++ b/params/D00617.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.910325170e+00,-1.786368012e+00,-1.550527573e+00,-1.213007141e-03,-5.031210021e-04,-1.242492080e+00,-2.719590962e-01,-1.374116517e-03,-2.742309570e-01,-1.938943897e-04,-1.406877160e+00,-1.100348473e+00,-1.851046109e-03,-4.104588032e-01,-5.680721370e-04,-6.529768705e-01 +weights1 = 2.428912640e+00,1.989566445e+00,1.843927145e+00,-5.175727885e-03,-2.214669948e-03,1.167751908e+00,5.137558579e-01,-5.865840241e-03,5.222620368e-01,-5.706671509e-04,1.357242584e+00,9.794141650e-01,-7.915837690e-03,5.284759402e-01,-1.144995680e-03,6.177946925e-01 +biases1 = -1.519275308e+00 +weights2 = +biases2 = diff --git a/params/D00618.003.txt b/params/D00618.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..5f3710c7efe7e4175f73221dbc24180ffc494065 --- /dev/null +++ b/params/D00618.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -3.075324893e-01,-9.355062991e-02,6.917291903e-04,-3.183268200e-05,1.458534449e-01,-1.492203400e-02,9.343986399e-03,6.651046686e-03,9.203535318e-02,-1.439683046e-02,-6.711373106e-03,1.107420474e-01,1.399278608e-05,-1.012543440e-01,1.003658995e-01,5.921866745e-02,7.563637197e-02,-2.012002766e-01,-2.826776505e-01,1.250605419e-04,2.162714303e-02,6.553690881e-02,-3.177207410e-01,-3.462219536e-01,7.227978110e-02,9.542853385e-02,-1.855626106e-01,9.547298402e-02,-3.787052119e-03,-7.027652860e-02,-2.044761032e-01,1.648583066e-07 +weights2 = 4.476721883e-01,4.337633252e-01,-1.466800924e-02,8.065683651e-04,-5.913170576e-01,4.169362783e-01,4.279259741e-01,-1.343531720e-02,-4.459958375e-01,3.238573670e-01,5.826255074e-04,-5.080171227e-01,-1.526046777e-03,4.401915371e-01,-3.327926397e-01,-6.068435907e-01,-2.156967223e-01,5.044885278e-01,5.649378300e-01,1.820382779e-03,3.968685865e-01,4.304141998e-01,5.052985549e-01,5.426338315e-01,-4.114708006e-01,-5.156324506e-01,4.738261104e-01,-4.918358326e-01,3.179033399e-01,5.113166571e-01,4.799144268e-01,-4.324374604e-04 +biases2 = -3.230042458e+00 diff --git a/params/D00619.003.txt b/params/D00619.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..b06d9b426485ffc810d21f60dbfe7941dd5a9948 --- /dev/null +++ b/params/D00619.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.294085669e-04,-1.374176645e-04,-6.576840678e-05,-7.177784443e-01,-2.875988483e+00,-2.330744028e+00,-9.043340106e-05,-9.452604055e-01,-1.965865612e+00,-2.067058231e-04,-1.172244156e-04,-8.560214043e-01,-1.071167499e-04,-1.102693204e-04,-1.681963477e-04,-1.566495048e-04 +weights1 = -4.641174556e-08,-3.908051838e-08,6.277431908e-08,9.806759953e-01,2.113034487e+00,2.462455750e+00,2.551818667e-08,1.020507574e+00,2.004076958e+00,-3.804212767e-08,3.000864224e-09,1.074538112e+00,-4.175484491e-08,-3.920264291e-08,1.817039741e-09,-4.581171709e-08 +biases1 = -6.434265137e+00 +weights2 = +biases2 = diff --git a/params/D00619.007.txt b/params/D00619.007.txt new file mode 100644 index 0000000000000000000000000000000000000000..9a606f4cfe587e814ac551b29c08c26e93de93d7 --- /dev/null +++ b/params/D00619.007.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.939055860e-01,-8.652003016e-04,-4.907467961e-01,-1.315070549e-03,-8.448565006e-01,-7.582213879e-01,-8.879652619e-02,-4.989420772e-01,-4.321295917e-01,-1.338566542e+00,-7.938776612e-01,-5.133414865e-01,-4.882467911e-03,-7.403979897e-01,-1.075411681e-03,-7.054356337e-01 +weights1 = 4.626936913e-01,4.584474955e-03,7.318085432e-01,1.101120934e-02,1.112143874e+00,1.044831157e+00,1.242274046e-01,7.180508971e-01,6.210941076e-01,1.667528272e+00,1.144534826e+00,7.483060360e-01,2.566862851e-02,1.006178141e+00,8.701892570e-03,9.782353640e-01 +biases1 = -2.134991646e+00 +weights2 = +biases2 = diff --git a/params/D00620.003.txt b/params/D00620.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..9b68ec7d4185a76b2a077c67ec801ae438ea852e --- /dev/null +++ b/params/D00620.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -8.447855711e-02,-8.330361452e-04,-6.844138843e-04,-9.465269744e-02,-5.595918745e-02,1.727268472e-02,-1.259172132e-04,-8.004532428e-04,-2.016714425e-04,-1.076961518e-03,-1.017258614e-01,-8.570448309e-02,-6.871733814e-02,-9.655522299e-04,-9.609888494e-02,-2.737950906e-02,1.384412795e-01,-2.991910151e-04,-2.252782322e-02,-3.728290903e-05,-6.980042672e-04,-1.100740483e-04,-4.495287139e-04,-2.869255375e-03,-9.770727158e-02,-1.156912258e-04,-1.117195934e-02,-1.019258634e-04,-2.823494724e-04,-5.837359349e-04,-1.942246163e-04,-6.156816613e-03 +weights2 = 6.050901413e-01,6.656569988e-02,-4.683625698e-02,5.951458812e-01,4.559547901e-01,-5.156496912e-02,-1.480685198e-03,-6.561173499e-02,-6.952905655e-02,-8.409832418e-02,5.894386172e-01,6.134552956e-01,5.574331880e-01,-6.896314025e-02,6.211391091e-01,2.953082323e-01,-1.748369932e-01,-1.388568431e-02,2.909237742e-01,-9.328793734e-03,-5.200757086e-02,7.956966013e-02,-4.357047752e-02,9.082050622e-02,6.251748800e-01,-7.187101245e-02,1.778492182e-01,7.377737761e-02,-1.148399562e-01,-1.432951689e-01,-2.116042003e-02,1.260358542e-01 +biases2 = -7.372258902e-01 diff --git a/params/D00621.003.txt b/params/D00621.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..601fa46575035386c7d8925c483caf1e8ab7f126 --- /dev/null +++ b/params/D00621.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -6.089737415e-01,-1.179770589e+00,-1.309793115e+00,-1.529351771e-01,-7.654380519e-03,-1.295828462e+00,-2.495554835e-01,-6.650137901e-01,-7.829754800e-02,-2.412415855e-02,-4.741347432e-01,-3.447454888e-03,-1.343187178e-03,-5.304886103e-01,-4.817493856e-01,-9.857420921e-01 +weights1 = 1.020798683e+00,1.650221944e+00,1.709050894e+00,3.680381775e-01,1.029855385e-01,1.713850856e+00,4.358276725e-01,1.189370632e+00,2.376048714e-01,1.123653427e-01,8.113467693e-01,8.521473408e-02,4.459103197e-02,1.016241312e+00,9.967767596e-01,1.403271556e+00 +biases1 = -2.324129343e+00 +weights2 = +biases2 = diff --git a/params/D00622.003.txt b/params/D00622.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..859caa44f319c7ba0037a6c5062ea01429796ae3 --- /dev/null +++ b/params/D00622.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -7.469033822e-03,-7.669240981e-02,2.213446889e-03,-5.480088294e-02,2.656602068e-03,7.950411178e-03,-2.549177036e-02,-1.955582388e-02,4.630752839e-03,-6.494391710e-03,-9.304717928e-02,-6.639168411e-02,1.115372870e-02,-1.262768507e-01,2.104055323e-02,-8.053789847e-03,2.184268087e-02,2.130265348e-02,-5.878410302e-03,1.209286321e-02,2.123754704e-03,-3.604592755e-02,-3.257630160e-03,-8.954043151e-04,1.232284307e-02,1.077735238e-02,6.387333386e-03,6.449581590e-03,7.054135948e-02,-9.901003912e-03,-3.536009416e-02,-8.518885006e-04 +weights2 = 1.356356125e-02,7.142418623e-01,-4.368536174e-02,3.760524690e-01,1.372084208e-02,-5.219744146e-02,1.839901209e-01,4.623476267e-01,-5.942208692e-02,-4.848157614e-02,1.281697989e+00,7.777223587e-01,1.913979948e-01,1.002498627e+00,-8.788745105e-02,-6.219496019e-03,-7.754136622e-02,-4.233761877e-02,-2.031964622e-02,-3.444029391e-02,-1.063330099e-03,2.586566806e-01,6.432111859e-01,-3.870603628e-03,-3.223183006e-02,-1.770973392e-02,4.541288316e-02,-1.495161280e-02,-1.543597430e-01,-9.031432867e-02,1.115417123e+00,2.295854315e-02 +biases2 = -1.019804597e+00 diff --git a/params/D00623.003.txt b/params/D00623.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..642cb4ab9a758752643cc9c4bbcd8293b1209b13 --- /dev/null +++ b/params/D00623.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -6.138920188e-01,-1.558918357e-01,-3.347063065e-01,-4.668942094e-01,-3.232472837e-01,-2.579076886e-01,-6.006509066e-01,-1.964590251e-01,-1.094567537e+00,-2.284334004e-01,-5.517784357e-01,-1.065041065e+00,-1.323365867e-01,-2.707382441e-01,-4.621507227e-01,-9.249082804e-01 +weights1 = 7.369704247e-01,3.200586438e-01,4.110510945e-01,5.166630149e-01,3.770532906e-01,3.726758957e-01,7.421317101e-01,3.461128175e-01,1.441397309e+00,3.528176546e-01,7.479212284e-01,1.448817730e+00,3.745317459e-01,3.530735075e-01,5.881248713e-01,1.156251669e+00 +biases1 = -1.460764170e+00 +weights2 = +biases2 = diff --git a/params/D00624.007.txt b/params/D00624.007.txt new file mode 100644 index 0000000000000000000000000000000000000000..3b9d5afdbdfeca54d19e3341e4f36924b72dfcaf --- /dev/null +++ b/params/D00624.007.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -5.820312072e-05,-7.607277803e-05,-4.260139763e-01,-6.475043893e-01,-1.121723253e-04,-1.051800605e-02,-2.348622307e-02,-1.044718665e-04,-1.840549260e-01,-1.544496864e-01,-1.390921026e-01,-5.901634268e-06,-3.396758437e-01,-1.051000727e-04,-5.925526057e-05,-1.841806173e-01 +weights1 = -1.417455405e-05,-1.801817234e-05,6.826836467e-01,1.042596817e+00,-5.709669858e-05,4.097625241e-02,7.773917913e-02,-1.835971943e-06,5.511022210e-01,4.257365763e-01,2.136342525e-01,1.959570363e-04,5.724664330e-01,-5.026284634e-05,-2.261716145e-05,4.940662086e-01 +biases1 = -3.919086158e-01 +weights2 = +biases2 = diff --git a/params/D00624.009.txt b/params/D00624.009.txt new file mode 100644 index 0000000000000000000000000000000000000000..d8f0a94093aa6703394679683c9549220ce79fd4 --- /dev/null +++ b/params/D00624.009.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -2.630071901e-02,9.000157937e-03,-4.233730584e-02,2.227845639e-01,4.135706276e-02,-2.644927800e-02,8.137092664e-06,9.874728508e-03,-3.089210764e-02,-1.553117931e-01,-5.187845230e-02,6.857033074e-02,9.140119702e-02,1.551737636e-02,1.734958403e-02,4.945068061e-02,4.465671256e-02,-1.980989772e-08,-2.238365710e-01,1.576503925e-02,-6.049913168e-02,-7.866119593e-02,3.235225379e-02,-1.194887459e-01,4.181047643e-06,-3.213070706e-02,5.025864084e-05,1.693094522e-01,1.773587614e-02,-1.988453567e-01,2.301777480e-03,-1.326815225e-02 +weights2 = 3.963902295e-01,3.000458144e-02,4.332998097e-01,-5.217009783e-01,-1.540662497e-01,3.273404539e-01,-5.027432780e-05,6.531529874e-02,9.353799224e-01,1.257044554e+00,4.802044332e-01,3.920311928e-01,-3.142996132e-01,-2.689963765e-02,3.098431528e-01,-9.873034805e-02,4.849227667e-01,4.224861883e-08,9.642971754e-01,3.802099228e-01,5.136797428e-01,5.820770264e-01,4.834888577e-01,7.402338386e-01,-9.610505913e-06,5.172448158e-01,1.495714532e-03,-4.155792892e-01,4.058859646e-01,1.065287232e+00,8.578019142e-01,3.338613808e-01 +biases2 = -1.782904625e+00 diff --git a/params/D00625.001.txt b/params/D00625.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..d3feb333328b7f30f6c029847faee0e0962d2d86 --- /dev/null +++ b/params/D00625.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 14 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.959438205e-01,-1.963134259e-01,-4.591539204e-01,-1.326671839e-01,-2.337019891e-01,-4.883357286e-01,-4.423505366e-01,-2.246781439e-01,-5.290621519e-01,-5.098919868e-01,-1.770794690e-01,-5.820523500e-01,-2.639067173e-01,-1.686067134e-01,-5.058010817e-01,-2.144881934e-01 +weights1 = 3.572474122e-01,2.326380908e-01,4.107384682e-01,1.800637841e-01,2.718980610e-01,4.677122533e-01,4.004212618e-01,2.921558022e-01,4.699799418e-01,4.656915069e-01,2.520981729e-01,5.704457760e-01,2.552700341e-01,2.252780795e-01,4.995009303e-01,2.664267421e-01 +biases1 = -2.130385637e-01 +weights2 = +biases2 = diff --git a/params/D00626.005.txt b/params/D00626.005.txt new file mode 100644 index 0000000000000000000000000000000000000000..b4c01fac98f0886e92967402961edc24ea5006fe --- /dev/null +++ b/params/D00626.005.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.214251995e+00,-9.404915545e-06,-1.995187283e+00,-4.835239947e-01,-3.410894573e-01,-2.005371094e+00,-1.039215803e+00,-1.362522744e-05,-8.044872629e-06,-4.913203716e-01,-5.519248843e-01,-7.748907592e-06,-1.287609666e-05,-9.164342373e-06,-7.061174983e-06,-5.775088668e-01 +weights1 = 1.736232162e+00,-3.240179285e-05,2.954725981e+00,6.193943024e-01,5.024781227e-01,2.718382597e+00,1.514036775e+00,-5.385679833e-05,-2.774227323e-05,7.283909321e-01,6.946038008e-01,-2.753331501e-05,-5.046970909e-05,-3.390929123e-05,-8.853088730e-06,6.039462686e-01 +biases1 = -3.574633360e+00 +weights2 = +biases2 = diff --git a/params/D00626.009.txt b/params/D00626.009.txt new file mode 100644 index 0000000000000000000000000000000000000000..ce570b2814fbc7bf8fd35f9a46be63850533c797 --- /dev/null +++ b/params/D00626.009.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.608980425e-02,-2.668058733e-03,-3.756435513e-01,-4.603792429e-01,-6.395411491e-01,6.452973001e-03,-3.876293302e-01,-8.540889621e-02,9.131176397e-03,-4.708985090e-01,2.542560175e-02,-5.236423016e-01,-6.230073571e-01,-6.901213527e-01,-5.732547641e-01,-6.116415858e-01 +weights1 = 1.643825024e-01,-3.945615026e-04,4.999564290e-01,7.110902071e-01,1.016471505e+00,3.286471963e-02,5.448524952e-01,2.244829237e-01,8.254535496e-03,6.711182594e-01,2.886086330e-02,8.761786222e-01,8.845121861e-01,1.079376817e+00,1.025237560e+00,1.079282880e+00 +biases1 = -1.342595816e+00 +weights2 = +biases2 = diff --git a/params/D00627.002.txt b/params/D00627.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..c764fea92ad9dc02301930c87d23471d260e62e9 --- /dev/null +++ b/params/D00627.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 14 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.204703924e-04,-6.603222340e-02,-4.801202158e-04,-2.280141925e-04,-7.610117644e-02,-1.026030034e-01,-1.888449333e-04,-4.516929761e-02,-6.580523401e-02,-9.815924615e-02,-3.832956718e-04,-1.085434109e-01,-1.026485115e-01,-1.780541241e-01,-9.536921978e-02,-2.890017058e-04 +weights1 = -9.989339014e-05,1.411163062e-01,-3.047926293e-04,-4.264403469e-05,2.086550891e-01,2.448930144e-01,-4.612540215e-05,1.330721378e-01,2.054671645e-01,2.847175300e-01,-2.564444731e-04,2.867338657e-01,2.902227044e-01,3.734522462e-01,2.893094122e-01,-1.851468987e-04 +biases1 = -3.151378930e-01 +weights2 = +biases2 = diff --git a/params/D00628.002.txt b/params/D00628.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..9b51a844ab65cf639705447074eace09be251269 --- /dev/null +++ b/params/D00628.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -6.250483566e-04,-5.702878535e-02,-9.407164529e-03,-2.391292341e-02,-3.474464640e-02,2.800381556e-02,6.880922243e-03,-2.464370569e-03,-9.230359574e-04,-2.933360171e-03,-4.542668816e-03,-1.402359009e-01,-8.058601990e-03,3.167256713e-02,-7.743994892e-02,-2.570682438e-03,-2.848993987e-02,-5.535043404e-02,-1.000238000e-03,-6.535699591e-03,3.983641043e-02,-1.715698987e-01,-6.150926929e-04,-2.233917266e-02,-5.571914837e-03,-2.554961946e-03,-8.438493125e-03,-5.274508893e-02,-5.149883404e-02,-6.387198716e-02,-7.999895606e-04,-7.720448193e-04 +weights2 = -4.971672967e-02,5.631201267e-01,-1.888242178e-02,-4.355482012e-02,3.321121931e-01,-4.511202872e-02,-1.162139792e-02,-2.972533554e-02,9.983234107e-03,-1.077773608e-02,4.224184901e-02,1.383036017e+00,8.036883175e-02,-5.112809688e-02,7.588602304e-01,-8.386327885e-03,2.886911333e-01,5.490939021e-01,-4.667938128e-02,-5.884717032e-02,-6.843525171e-02,1.712224960e+00,3.814675380e-03,2.193583846e-01,7.251243293e-02,-7.932451554e-03,7.928714156e-02,5.269251466e-01,5.118614435e-01,6.291528940e-01,1.850373112e-02,-2.788650244e-02 +biases2 = -1.601002574e+00 diff --git a/params/D00629.006.txt b/params/D00629.006.txt new file mode 100644 index 0000000000000000000000000000000000000000..3809cb30b28e6b2d7d958f61c49f4b48b4b9eeb3 --- /dev/null +++ b/params/D00629.006.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -9.226937890e-01,-2.862558663e-01,-2.899091840e-01,-7.379842401e-01,-3.564645648e-01,-2.791171372e-01,-2.053825855e+00,-8.892440796e-01,-2.468251288e-01,-2.696090639e-01,-2.565621138e-01,-1.197969425e-03,-2.296303660e-01,-2.991044223e-01,-3.927367330e-01,-1.035977006e+00 +weights1 = 1.282246113e+00,9.162177444e-01,8.129841089e-01,1.157610536e+00,9.190512896e-01,7.519831657e-01,2.612912893e+00,1.475272059e+00,7.177999616e-01,6.887795329e-01,7.372406721e-01,2.164671168e-04,7.153096199e-01,8.156969547e-01,8.940873146e-01,1.435875058e+00 +biases1 = -3.474534750e+00 +weights2 = +biases2 = diff --git a/params/D00630.003.txt b/params/D00630.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..4058351819239ee7400f947804592b30e5e963a1 --- /dev/null +++ b/params/D00630.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -5.887957013e-05,-4.477022886e-01,-4.243131280e-01,-1.144713242e-04,-3.483460844e-01,-1.111705422e+00,-1.251812209e-04,-6.814307570e-01,-7.681450370e-05,-3.987242877e-01,-1.235835195e+00,-1.092908263e+00,-3.552737236e-01,-1.089389843e-04,-1.512076378e+00,-4.135685595e-05 +weights1 = -3.733230697e-04,6.808703542e-01,6.716157794e-01,-1.164112473e-03,5.717267990e-01,1.198548675e+00,-1.569713233e-03,8.492878675e-01,-7.031723508e-04,6.218131781e-01,1.327875614e+00,1.180894971e+00,6.386480331e-01,-7.285039173e-04,1.567962527e+00,-3.047761566e-04 +biases1 = -9.339419603e-01 +weights2 = +biases2 = diff --git a/params/D00631.002.txt b/params/D00631.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..0d8f52e8273796c82a82881461f17386eb86105f --- /dev/null +++ b/params/D00631.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.290097229e-03,-2.024973277e-03,-4.694300238e-03,-2.046531154e-05,-1.479178071e-01,-9.437640198e-03,-2.804036856e+00,-2.140325867e-02,-2.987143351e-03,-7.202364504e-03,-1.303813653e-03,-7.158240303e-03,-1.867393614e-03,-1.047242340e-02,-4.836970766e-04,-9.939290583e-03 +weights1 = -6.973724812e-03,-4.292102996e-03,9.508233517e-02,7.218690735e-05,3.149897456e-01,1.094167586e-02,5.139365673e+00,4.092606157e-02,4.478794988e-03,-1.526675839e-02,-2.763535362e-03,1.164202914e-01,1.206075400e-02,5.050225183e-03,-1.407261007e-02,1.536786929e-02 +biases1 = -1.151085421e-01 +weights2 = +biases2 = diff --git a/params/D00632.001.txt b/params/D00632.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..c830ac9859055714fbee2d833d046b73675254f0 --- /dev/null +++ b/params/D00632.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.172905937e-01,-7.996392846e-01,-4.751000702e-01,-1.764725000e-01,-4.293914139e-02,-1.189622208e-01,-1.243665144e-01,-7.586030960e-01,-6.339766979e-01,-1.427062303e-01,-1.301928461e-01,-3.542462587e-01,-1.149861962e-01,-1.011464834e+00,-5.698351264e-01,-1.485912949e-01 +weights1 = 5.549363494e-01,1.176745534e+00,7.022817135e-01,3.768882751e-01,7.815596461e-02,5.004553199e-01,4.647181034e-01,1.100757718e+00,9.331860542e-01,6.147488356e-01,4.804885387e-01,5.487493873e-01,5.131594539e-01,1.445676446e+00,8.570332527e-01,5.877687335e-01 +biases1 = -1.629988790e+00 +weights2 = +biases2 = diff --git a/params/D00633.001.txt b/params/D00633.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..c1ae02f05f68a0df56850aeb41f7ed91a5cfb67c --- /dev/null +++ b/params/D00633.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 1.730943285e-02,-1.247213106e-07,8.552526683e-02,-1.494468842e-02,7.026879489e-02,8.446687832e-03,-4.355264082e-06,3.603709862e-02,-6.496915221e-02,1.244127401e-03,-7.916381719e-07,7.699145377e-02,-1.387508512e-01,-2.574610151e-02,2.619738807e-04,6.124246283e-04,-1.920158863e-01,-3.756850362e-01,1.103735194e-01,-6.475903094e-02,-3.049730659e-01,2.693745046e-05,8.455743641e-02,-1.827318370e-01,1.745100832e-03,-2.672478557e-01,9.832725860e-03,3.136845407e-05,-1.979584247e-01,-3.928051889e-02,-3.995822072e-01,4.220275581e-02 +weights2 = 3.206748143e-02,-2.896421065e-04,4.109207988e-01,-4.887098372e-01,4.438311458e-01,2.468400821e-02,-4.989156732e-04,-6.035569906e-01,-7.953754663e-01,7.371136453e-03,2.064380242e-04,4.206151664e-01,-9.351888895e-01,-4.688456059e-01,-1.693978673e-03,8.000269532e-03,5.462321043e-01,6.370581985e-01,1.610370874e-01,4.351273477e-01,6.526546478e-01,8.773386944e-04,2.940833867e-01,5.003983974e-01,1.111454144e-02,5.472554564e-01,4.334965944e-01,4.727672786e-03,5.433062315e-01,4.756152928e-01,8.640681505e-01,-7.393954992e-01 +biases2 = -8.177157640e-01 diff --git a/params/D00634.001.txt b/params/D00634.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..eca3c73e4c0ae7fd4966b91cba05d8dbd7612750 --- /dev/null +++ b/params/D00634.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 1.871992461e-02,5.132036167e-04,-9.683433920e-02,-3.545154631e-01,-4.363078624e-02,-4.005891085e-01,3.756169975e-02,-3.444516063e-01,-5.966484547e-01,1.735361665e-02,-3.068820536e-01,-2.148807794e-02,-2.018633485e-02,-1.114586815e-01,1.894882768e-01,1.164563298e-01,1.592958122e-01,-1.318959594e-01,-3.495298326e-02,-1.670144051e-01,4.380781204e-02,2.930129468e-01,-1.576848179e-01,-2.612811327e-01,-1.305326354e-02,-2.712695003e-01,-1.945277210e-03,-2.175365537e-01,1.866545063e-03,-1.575184613e-01,-1.319940016e-02,-1.393711716e-01 +weights2 = 5.066268146e-02,7.589553017e-03,3.788246512e-01,6.183791161e-01,-1.408614069e-01,5.473887324e-01,1.984927654e-01,-6.912249327e-01,8.367581964e-01,2.437590957e-01,6.243130565e-01,-3.124557137e-01,-1.242685691e-01,1.779556572e-01,1.564444751e-01,1.513349563e-01,8.520280570e-02,-4.197388887e-01,2.275854051e-01,-5.474798679e-01,-1.695814878e-01,1.470358074e-01,2.053454518e-01,3.130710721e-01,1.370078605e-02,3.908213079e-01,1.484881341e-01,3.207333982e-01,3.658216819e-02,4.390244484e-01,2.672193348e-01,1.695906967e-01 +biases2 = -1.685338914e-01 diff --git a/params/D00635.001.txt b/params/D00635.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..32aae0299b7c3211be949f667e8a8e8cceb2ddbe --- /dev/null +++ b/params/D00635.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -4.889139235e-01,-2.967514738e-04,-7.272500396e-01,-6.275952458e-01,-3.070612252e-01,-2.019657550e-04,-2.815423068e-04,-2.845542133e-01,-2.406384200e-01,-4.289036393e-01,-3.186346730e-04,-2.101907303e-04,-1.290758997e-01,-3.202351034e-01,-1.279650460e-04,-8.059775084e-02 +weights1 = 5.541818738e-01,-7.248719402e-10,7.527592182e-01,6.074168682e-01,3.117833436e-01,-5.295236472e-10,1.906673569e-10,3.373888731e-01,2.397354394e-01,4.686470032e-01,1.588853354e-11,1.810007560e-10,2.747600675e-01,3.398997188e-01,1.265466204e-10,1.464634538e-01 +biases1 = -2.190840691e-01 +weights2 = +biases2 = diff --git a/params/D00636.003.txt b/params/D00636.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..c635ec7d8594ae86762e8298b371c4e1c73ed1ea --- /dev/null +++ b/params/D00636.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -2.606889047e-02,-1.430970151e-02,-1.560786366e-01,-1.157799084e-02,-4.004446673e-04,-6.468655920e-05,-1.043779850e-01,-7.826406509e-03,-1.944803444e-05,4.884212837e-02,-5.935522541e-02,4.810776561e-03,1.468508597e-02,2.048507705e-02,-2.628959774e-04,7.517059892e-02,-2.811765298e-03,6.086202711e-02,3.307813022e-04,-2.316147648e-02,-6.456837803e-02,-2.491740696e-02,-2.066092752e-02,2.468138700e-04,-8.168398403e-03,9.168116230e-05,8.886983618e-03,-2.979224548e-02,-9.826344904e-04,-6.128118373e-03,1.437970437e-02,2.116842754e-02 +weights2 = 1.798234582e-01,3.700545728e-01,2.669118643e-01,3.886605427e-02,3.376005217e-03,-2.547185170e-03,2.211903930e-01,7.889327407e-02,2.966580912e-03,4.294154644e-01,4.043816626e-01,-2.322404087e-02,1.112731025e-01,3.913194314e-02,-1.225082902e-03,-3.691364080e-02,1.111043245e-02,5.079701915e-02,1.933370158e-02,6.992076337e-02,3.905064464e-01,6.497091800e-02,2.960620224e-01,7.249590009e-03,3.294645548e-01,3.568992252e-03,-1.644064486e-02,2.778209448e-01,-1.299211290e-02,-9.135751985e-03,1.478982717e-01,6.822632998e-02 +biases2 = -8.050895929e-01 diff --git a/params/D00637.003.txt b/params/D00637.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..7fc1a5edbc8328396a87f72b475dcec08ff216fd --- /dev/null +++ b/params/D00637.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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4.588592649e-01,-9.623363614e-01,-7.553846389e-02,1.166226268e-01,-4.107491300e-02,8.698979765e-02,2.525287628e+00,-9.919995070e-02,-2.215082571e-02,-1.705351919e-01,-3.059117496e-02,1.585520387e+00,-3.722900152e-02,3.229152411e-02,-6.048635021e-02,6.878961921e-01,2.551200986e-02,-5.342098698e-02,-1.529809553e-02,3.625497818e-01,6.009636819e-02,3.085807860e-01,6.852489114e-01,-1.538045406e-01,1.077998161e+00,1.471494794e+00,1.427755784e-02,5.642004311e-02,-7.025831938e-02,1.544587135e+00,6.752676517e-02,-2.626265585e-02 +biases2 = -2.007495165e+00 diff --git a/params/D00638.003.txt b/params/D00638.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..d02586ebd08811b39a0408838901588b5744d831 --- /dev/null +++ b/params/D00638.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 1.035956368e-01,3.288535774e-02,-1.965939999e-01,-8.678802848e-02,-2.460198998e-01,-6.939844694e-03,-4.372364581e-01,-2.872316539e-01,-2.879045606e-01,-3.682369133e-03,-1.571022905e-02,-1.399218589e-01,2.283677459e-02,6.195486337e-02,-1.052759617e-04,-7.698838133e-03,3.307061642e-02,4.320066050e-02,-4.542911351e-01,4.340658896e-03,-2.457913011e-02,6.868587434e-02,-2.938412726e-01,-7.535946369e-02,-2.874955162e-02,7.831527852e-03,-2.582398951e-01,5.551145971e-02,1.178121753e-02,-3.777211010e-01,-1.143738395e-03,-1.334874630e-01 +weights2 = -9.243780375e-01,1.820272058e-01,6.246200800e-01,2.371980250e-01,5.566385388e-01,1.900155842e-01,7.871584892e-01,6.457887888e-01,6.759711504e-01,-2.913871035e-02,-2.111592740e-01,8.669505119e-01,-6.244643331e-01,-9.095689058e-01,-1.115758321e-03,-3.211338073e-02,1.450143754e-01,-8.250004649e-01,8.646361828e-01,-2.607392669e-01,8.737051487e-02,-6.132678986e-01,7.372759581e-01,3.778822422e-01,1.273954567e-02,-1.029347181e+00,5.943685770e-01,1.213013530e-01,2.887056768e-02,8.559734821e-01,-8.548460901e-02,2.832210362e-01 +biases2 = -3.368032575e-01 diff --git a/params/D00639.003.txt b/params/D00639.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..41f095dc12f35e53666e9c6b368d9743fc45c06a --- /dev/null +++ b/params/D00639.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.048458606e-01,-9.855582903e-05,-2.835115010e-04,-9.206919931e-04,-1.069330275e-01,-7.641570410e-04,-4.505628049e-01,-5.445358157e-01,-2.120517641e-01,-2.525350153e-01,-2.653181553e-01,-8.758043987e-04,-1.088631079e-01,-1.459288001e-01,-1.589754820e-01,-6.004093885e-01 +weights1 = 5.186696053e-01,2.080495702e-03,-2.628104528e-03,-8.535239846e-03,5.389363766e-01,-7.084025070e-03,6.594872475e-01,8.237316608e-01,5.620045662e-01,5.429024696e-01,5.371755958e-01,-8.119075559e-03,3.221154809e-01,5.178593397e-01,4.869129658e-01,8.296784163e-01 +biases1 = -1.618126273e+00 +weights2 = +biases2 = diff --git a/params/D00640.003.txt b/params/D00640.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..0f6121dd415add80e7b3ecc83a279a5ccb74fde2 --- /dev/null +++ b/params/D00640.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.019664481e-01,1.580015756e-02,5.001499131e-02,-1.082435474e-01,-2.818386201e-05,-5.045749640e-05,-6.826465484e-03,-2.943607979e-04,-1.623046264e-04,-1.153119956e-04,5.286339298e-02,-2.987235530e-05,-1.977325010e-04,-1.357855363e-04,3.759102523e-02,-1.795446442e-04 +weights1 = 4.965853989e-01,9.761090496e-07,2.400755733e-01,5.432484150e-01,1.266903610e-06,6.528479730e-07,3.657366037e-01,-8.950746064e-07,-8.473362527e-07,9.143253692e-07,1.588798910e-01,-3.098051593e-07,1.085254326e-06,-1.187021212e-06,1.938310415e-01,-9.374454635e-07 +biases1 = -1.309124112e+00 +weights2 = +biases2 = diff --git a/params/D00641.002.txt b/params/D00641.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..f291ac4e20b2be1fe1bed403c7c1fe4257b8817e --- /dev/null +++ b/params/D00641.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 1.463795174e-02,6.834676117e-02,8.103005588e-02,3.444359079e-02,1.566082686e-01,0.000000000e+00,3.358229995e-03,-1.813211106e-02,-1.841879566e-03,3.660882264e-02,-5.317105446e-03,9.676628560e-02,-2.865693904e-02,-2.779435515e-01,-7.003866485e-04,2.624714188e-02,-2.891683206e-02,0.000000000e+00,4.936724156e-02,1.289364100e-01,-1.006553136e-02,-3.411252284e-03,4.590168595e-03,9.532935172e-02,-1.271183044e-01,5.007779226e-02,-3.416322637e-03,1.820331253e-02,-8.611361496e-03,-1.590192690e-02,4.614787176e-02,4.037551582e-02 +weights2 = -2.456592396e-02,3.711088002e-01,3.334838152e-01,5.757516623e-01,1.111829057e-01,-1.014951500e-03,-7.452999055e-02,-2.497842535e-02,3.882986493e-03,1.359076649e-01,-1.455530152e-02,9.783395380e-02,4.178437293e-01,8.879706860e-01,3.586344048e-02,6.635851413e-02,4.803671241e-01,-7.043495774e-02,4.549801946e-01,1.190242544e-01,-1.130411625e-01,-4.489865527e-02,3.724457622e-01,2.209932804e-01,5.844874382e-01,-9.464111924e-02,-7.504189387e-03,-4.598166421e-02,-1.472481620e-02,-2.435068134e-03,1.141272113e-01,1.749039292e-01 +biases2 = -2.524069250e-01 diff --git a/params/D00642.003.txt b/params/D00642.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..a3c1de01202bf40ea7ead891db9e8794ffe85177 --- /dev/null +++ b/params/D00642.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.636396796e-01,-4.277503192e-01,-3.265121579e-01,-2.310572267e-01,-2.928923666e-01,-2.159329504e-01,-4.093197882e-01,-1.920735836e-01,-2.660707831e-01,-1.841916740e-01,-2.894000411e-01,-3.539429605e-01,-2.205355912e-01,-2.666286230e-01,-2.520839572e-01,-1.852966547e-01 +weights1 = 5.495408773e-01,9.507240057e-01,7.953525782e-01,8.272218704e-01,8.364291787e-01,7.375593781e-01,8.824412823e-01,4.711118340e-01,7.972865105e-01,6.194126010e-01,8.032587171e-01,8.038587570e-01,7.880010605e-01,7.552514076e-01,7.551565170e-01,6.398214102e-01 +biases1 = -1.968175173e+00 +weights2 = +biases2 = diff --git a/params/D00643.002.txt b/params/D00643.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..443c5f490c337249abbd0cf85c6aacd21f61f0bc --- /dev/null +++ b/params/D00643.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.394736697e-03,-1.031941036e-03,-1.788754016e-03,-1.017632365e+00,-1.451839805e-01,-2.770482898e-01,-2.374295611e-03,-1.353771687e-01,-4.477711022e-01,-2.045529783e-01,-3.485525846e-01,-1.430776715e-01,-1.450829208e-03,-9.315027273e-04,-8.565005846e-04,-2.368167639e-01 +weights1 = -2.088153968e-03,-8.183704340e-04,-7.769463584e-03,1.315219164e+00,2.705218792e-01,3.524438739e-01,-5.732244346e-03,3.153543472e-01,3.766034245e-01,3.400120735e-01,3.621022999e-01,2.695327997e-01,-2.655912889e-03,-1.336237532e-03,-6.186109968e-04,3.329218626e-01 +biases1 = -7.866029739e-01 +weights2 = +biases2 = diff --git a/params/D00644.003.txt b/params/D00644.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..0dfb8373bdb21acaa0a875d7e51d7ff048d3db22 --- /dev/null +++ b/params/D00644.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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-1.617771517e-08,3.486249149e-01,3.687538538e-06,7.766128778e-01,1.409058809e+00,8.857414722e-01,-1.510653419e-06,-6.670764647e-03,2.625651658e-01,1.591317528e-06,4.308771167e-05,-6.475310307e-03,7.932519168e-02,-9.187051120e-10,-4.839843314e-06,-1.270140365e-05,1.329390239e-02,1.156658120e-02,7.821806706e-03,8.586777449e-01,-1.592570101e-03,-3.875810216e-05,6.501236558e-02,2.509690821e-01,-1.859029988e-03,1.645707369e+00,3.803216293e-02,1.964159310e-02,3.466460330e-04,1.125488058e-01,-3.947993173e-05,4.426464102e-07 +biases2 = -1.578056693e+00 diff --git a/params/D00645.006.txt b/params/D00645.006.txt new file mode 100644 index 0000000000000000000000000000000000000000..1c03bfa877d4dcfdd190695c44fd884b6e7175ed --- /dev/null +++ b/params/D00645.006.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.129523754e-01,-3.097960353e-01,-9.321796298e-01,-3.004421890e-01,-9.282642603e-01,-9.153755307e-01,-7.285254076e-03,-2.338706553e-01,-1.820721775e-01,-8.283966035e-02,-7.108685970e-01,-3.555502892e-01,-1.448669195e+00,-2.545883954e-01,-2.493540645e-01,-3.391868668e-03 +weights1 = 5.612827539e-01,5.799758434e-01,1.419910312e+00,4.074195027e-01,1.270694733e+00,1.236997724e+00,-1.563985134e-03,5.599833131e-01,5.169151425e-01,3.395312428e-01,9.953974485e-01,4.926598072e-01,1.988326073e+00,5.080278516e-01,5.482401252e-01,-1.187842223e-03 +biases1 = -1.471782923e+00 +weights2 = +biases2 = diff --git a/params/D00646.002.txt b/params/D00646.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..8f9f6538e66388a6d9c94abe5c695b58a1c2e44e --- /dev/null +++ b/params/D00646.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -7.543718675e-04,-2.265151124e-03,-1.209014282e-01,-1.856543822e-03,-3.447549243e-04,-1.023058780e-03,1.485249121e-02,-9.017577395e-04,-6.601570547e-02,3.779350966e-02,-7.654832602e-01,-1.527623460e-02,-9.100630996e-04,-1.702597179e-02,-1.118323088e+00,-4.412937560e-04 +weights1 = -1.128405702e-09,-4.149636254e-03,1.394506097e-01,-3.460363951e-03,3.807440585e-09,-3.779666731e-04,5.399255082e-03,-5.707153832e-06,1.011003852e-01,1.530737616e-02,3.549676836e-01,4.507651925e-02,-4.616288352e-04,6.983710825e-02,4.988122582e-01,1.068497624e-09 +biases1 = -8.078759909e-02 +weights2 = +biases2 = diff --git a/params/D00647.002.txt b/params/D00647.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..7c9aa2c072acda99aaf16d366a81cb9a50d67ceb --- /dev/null +++ b/params/D00647.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 5.016146600e-02,3.209537268e-01,-1.726092398e-02,-6.095847487e-02,3.493516520e-02,0.000000000e+00,0.000000000e+00,-3.172608837e-02,-7.823901251e-03,-1.785457321e-02,7.407429069e-02,-2.078596130e-02,1.724176705e-01,-1.495717615e-01,-4.765079916e-02,5.821309239e-02,3.473019600e-02,-1.533599664e-02,4.956906661e-03,2.245382406e-02,1.462923735e-01,-1.151795033e-02,-5.565955862e-02,-8.908092231e-02,2.334075398e-04,3.265710175e-01,4.228353500e-01,2.034971956e-03,1.575853117e-02,-4.030000046e-02,0.000000000e+00,-9.892991930e-02 +weights2 = 2.216901332e-01,-7.930392623e-01,-7.981136441e-03,-4.031365365e-02,-1.734206080e-01,-2.317972854e-02,1.721313410e-02,-1.277354825e-02,-2.838670462e-02,1.580113918e-01,-3.055274487e-01,-9.641596116e-03,4.989992976e-01,1.420271635e+00,2.635450959e-01,-1.885242462e-01,-1.555292588e-02,-1.210494041e-01,1.218407601e-02,-1.789465360e-02,1.880292594e-01,3.141206689e-03,5.101141930e-01,6.092314720e-01,9.688462131e-03,7.156682611e-01,9.846046567e-01,5.196365062e-03,-8.748726547e-02,6.878606677e-01,-1.325998176e-02,3.728624284e-01 +biases2 = -2.391977608e-01 diff --git a/params/D00648.004.txt b/params/D00648.004.txt new file mode 100644 index 0000000000000000000000000000000000000000..c159af245a6603ade43ea7ce8c5df39058ef87ac --- /dev/null +++ b/params/D00648.004.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -4.238462150e-01,-7.358002067e-01,-8.837620616e-01,-2.457790971e-01,-2.931224704e-01,-1.401002526e+00,-7.935110927e-01,-2.567539215e-01,-1.295812368e+00,-2.923330665e-01,-3.525463939e-01,-8.706116676e-01,-7.595477700e-01,-1.210046172e+00,-8.004115820e-01,-5.016564727e-01 +weights1 = 6.126019359e-01,1.202483773e+00,1.352829337e+00,5.446044207e-01,5.514954925e-01,2.148803473e+00,1.291854978e+00,5.632047653e-01,2.000308752e+00,6.221843362e-01,6.753391027e-01,1.394344807e+00,1.142814875e+00,1.817028880e+00,1.223690152e+00,7.606160045e-01 +biases1 = -2.605393648e+00 +weights2 = +biases2 = diff --git a/params/D00649.002.txt b/params/D00649.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..271230fa970e89618b48118b47112133adfc0f14 --- /dev/null +++ b/params/D00649.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -5.914760232e-01,-1.049018741e+00,-6.466355324e-01,-3.845590651e-01,-2.297555357e-01,-2.811537087e-01,-2.510009110e-01,-2.208074182e-01,-4.338048398e-01,-1.247889847e-01,-7.681671977e-01,-2.174657732e-01,-2.051778138e-01,-9.093004465e-01,-4.840757251e-01,-4.351585507e-01 +weights1 = 6.487753391e-01,9.034769535e-01,6.075654030e-01,4.730110466e-01,3.642876446e-01,3.557781875e-01,3.780111372e-01,3.481291831e-01,4.688570201e-01,2.687602341e-01,6.807398200e-01,3.463442922e-01,3.040213585e-01,8.227149248e-01,5.164353848e-01,5.561451912e-01 +biases1 = -8.187306523e-01 +weights2 = +biases2 = diff --git a/params/D00650.005.txt b/params/D00650.005.txt new file mode 100644 index 0000000000000000000000000000000000000000..65556eca5be4781c044ead4554fc86f0c5dc6707 --- /dev/null +++ b/params/D00650.005.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 1 +num_hidden = 0 +detectors = 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+thresholds = -2.449778840e-03,-2.723257065e+00,-4.050504565e-01,-1.985692885e-03,-1.749882579e+00,-2.587544203e+00,-1.027636647e+00,-3.174252575e-03,-1.325064600e-01,-1.179320039e-03,-3.384553827e-03,-5.385187268e-01,-3.401201684e-03,-1.881971478e+00,-1.672809869e-01,-1.168772355e-01 +weights1 = -2.686137334e-03,-1.129238092e-10,1.821670294e+00,-1.935580075e-01,8.916278481e-01,5.011297762e-02,1.670950933e-09,-7.341585122e-03,1.936472893e+00,-5.930880085e-02,1.761256576e+00,-2.571942508e-01,1.147001982e+00,-3.545999900e-02,-4.287479911e-03,5.389393773e-04,1.200292945e+00,2.807452530e-02,-8.134281379e-04,1.367552627e-09,-4.025864881e-03,-5.818631034e-04,6.140792742e-03,-3.279510438e-01,-2.978355624e-03,1.776986057e-03,1.832938790e+00,1.490120683e-02,-4.719364271e-02,-8.143447340e-02,-1.753641665e-02,-6.331013888e-02 +biases1 = -7.666357994e+00 +weights2 = +biases2 = diff --git a/params/D00650.007.txt b/params/D00650.007.txt new file mode 100644 index 0000000000000000000000000000000000000000..f5bde278b0031b239a78ffcfd956781248141b6f --- /dev/null +++ b/params/D00650.007.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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1.168385744e+00,1.213086322e-01,1.123887021e-03,5.923178196e-01,-1.314401510e-03,-1.401811466e-02,1.525036693e+00,2.447155304e-03,-1.669726800e-03,6.530233077e-05,5.403475370e-03,9.157663211e-03,-1.189112384e-02,-2.734276932e-03,5.647969842e-01,1.602901029e-03,4.380487800e-01,7.047538529e-04,4.017573316e-03,4.933766127e-01,8.555981517e-01,1.506762862e+00,5.884929746e-02,1.738053747e-03,2.535732687e-01,3.383392759e-04,9.846123457e-01,-1.061212923e-02,-5.418755114e-03,7.789467573e-01,2.142849989e-04,-3.248480149e-03 +biases2 = -2.481995344e+00 diff --git a/params/D00651.003.txt b/params/D00651.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..414af0b92700da1b71f608ca5c32bb953968dc82 --- /dev/null +++ b/params/D00651.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.452473849e-01,-3.597867191e-01,-2.729821205e-01,-1.390346736e-01,-3.068911135e-01,-5.158285052e-02,-2.097969651e-01,-2.105678022e-01,-5.789904594e-01,-3.820452690e-01,-3.895101547e-01,-1.279855818e-01,-4.314497411e-01,-2.558966577e-01,-1.859839559e-01,-2.662323415e-01 +weights1 = 3.203579783e-01,4.480165243e-01,4.235133529e-01,2.911040187e-01,4.274748564e-01,2.397926450e-01,3.561154008e-01,3.668906391e-01,6.586406231e-01,5.317742825e-01,5.075381994e-01,3.777296543e-01,5.663546324e-01,3.713154793e-01,3.261252642e-01,4.174562097e-01 +biases1 = -5.612778068e-01 +weights2 = +biases2 = diff --git a/params/D00652.003.txt b/params/D00652.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..dd2ebc6329e0db658bd02c242975a0d173cde25e --- /dev/null +++ b/params/D00652.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.157473713e-01,-2.420760095e-01,-1.528676301e-01,-1.558522308e-05,-2.078064426e-05,-4.997444194e-05,-2.272756100e-01,-1.914532004e-05,-2.652262265e-05,-1.742061675e-01,-3.152434147e-05,-1.717737466e-01,-8.737615347e-01,-1.655803919e+00,-3.161429777e-05,-2.306010356e-05 +weights1 = 5.120322108e-01,4.891151190e-01,5.196341276e-01,4.402834347e-11,-2.920992115e-09,-5.307023709e-10,4.641723335e-01,-2.404643151e-10,1.007545380e-09,5.100865960e-01,-9.398237050e-11,4.858929217e-01,1.214135051e+00,2.409135818e+00,-4.291711431e-09,2.147178213e-09 +biases1 = -1.083766818e+00 +weights2 = +biases2 = diff --git a/params/D00652.004.txt b/params/D00652.004.txt new file mode 100644 index 0000000000000000000000000000000000000000..d094a1ad2be4bd2458349bff79201233bfc500d0 --- /dev/null +++ b/params/D00652.004.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.340879798e+00,-8.066860437e-01,-9.609625936e-01,-1.367120028e+00,-7.648917437e-01,-6.673309207e-01,-7.710061073e-01,-7.227534056e-01,-1.074576259e+00,-7.180693746e-01,-4.941195250e-01,-9.576650262e-01,-1.528740287e+00,-6.014346480e-01,-7.666045427e-01,-1.076078892e+00 +weights1 = 1.432348728e+00,9.201998711e-01,1.020679474e+00,1.527289152e+00,8.548856974e-01,8.543924689e-01,8.330907226e-01,8.862948418e-01,1.151252985e+00,8.180408478e-01,7.786243558e-01,1.048625827e+00,1.613208294e+00,8.803206682e-01,8.314911127e-01,1.121201396e+00 +biases1 = -2.405282259e+00 +weights2 = +biases2 = diff --git a/params/D00653.003.txt b/params/D00653.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..1c150cc01413bb180165e3c1285352a361671a65 --- /dev/null +++ b/params/D00653.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.161773202e-04,-1.791941613e-04,-1.560166565e-04,-3.212729061e-04,-1.023291625e-04,-8.092714124e-04,-1.028197221e-04,-1.735653786e-04,-1.880717464e-04,-3.242722014e-04,1.394671272e-03,-1.971336314e-04,-3.352401257e-01,-2.359965444e-01,-1.042398042e-03,-4.913104475e-01 +weights1 = -2.531408332e-03,-1.151824603e-03,3.857671283e-03,7.079682313e-03,-3.802622668e-04,2.003236115e-02,-3.851988586e-04,-1.095302054e-03,-1.240929472e-03,-2.612674842e-03,-2.391290036e-05,4.731445573e-03,1.031937838e+00,1.068829536e+00,2.852115594e-02,1.362456322e+00 +biases1 = -9.344494343e-01 +weights2 = +biases2 = diff --git a/params/D00654.003.txt b/params/D00654.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..61e3418dea882279c25540e971be59b18998e432 --- /dev/null +++ b/params/D00654.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -4.263319715e-04,-2.757658958e-01,-1.823673368e+00,2.290084772e-02,-2.797821362e-04,-3.471000791e-01,-1.850516915e+00,-2.632414689e-04,-5.797134363e-04,-2.021847991e-03,-2.945438027e-01,-9.697055793e-04,-2.770044506e-01,-1.130190911e-03,-1.638431400e-01,-3.053978086e-01 +weights1 = 6.620327326e-07,5.426796079e-01,2.231490612e+00,-4.732004163e-05,-9.485150372e-07,5.379687548e-01,2.418429136e+00,9.747539025e-07,3.127160539e-07,-5.472659836e-07,4.454906285e-01,5.215673013e-07,5.781837106e-01,7.353650631e-07,4.884845018e-01,5.595648885e-01 +biases1 = -1.873504758e+00 +weights2 = +biases2 = diff --git a/params/D00655.002.txt b/params/D00655.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..fdb8d533d75766e3a947bb1426888dd14fe5b031 --- /dev/null +++ b/params/D00655.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.241189569e-02,-6.041331887e-01,-1.847455949e-01,-2.076949924e-01,-1.566844583e-01,-2.005115300e-01,-1.653061956e-01,-1.994486898e-01,-1.082829237e+00,-1.652928442e-01,-1.014213324e+00,-5.144957900e-01,-1.934942901e-01,-3.014439046e-01,-3.480743989e-02,-1.782530546e-01 +weights1 = 1.034551933e-01,8.489894271e-01,3.535503745e-01,4.620218873e-01,3.831574023e-01,4.617224038e-01,3.995285034e-01,4.476530552e-01,1.562990069e+00,3.999502659e-01,1.524076819e+00,7.770351171e-01,3.940089345e-01,4.092325568e-01,2.396465093e-01,3.776443005e-01 +biases1 = -9.830493331e-01 +weights2 = +biases2 = diff --git a/params/D00655.006.txt b/params/D00655.006.txt new file mode 100644 index 0000000000000000000000000000000000000000..80a9a1db33b91f18b2174356d1f6a8b7dc4e28db --- /dev/null +++ b/params/D00655.006.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -5.256509781e-01,-2.520915359e-06,1.739624655e-03,-5.373187378e-05,6.055024862e-01,-2.201585174e-01,-5.261751357e-05,-5.800412509e-06,-1.068848433e-04,-2.099011681e-06,7.647615075e-01,-6.502608448e-05,-2.314054427e-06,-3.438473505e-05,-7.317778827e-09,4.766540527e-01,-6.171561836e-06,-1.130690932e+00,2.161413198e-03,7.128339410e-01,-7.093969180e-05,-6.796614616e-05,-1.165029607e-04,-6.649886817e-02,2.009799616e-08,-8.569117188e-01,6.104164124e-01,5.493067778e-09,-6.830826038e-08,1.444698494e-08,-7.928653213e-05,-4.063054348e-06 +weights2 = 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+thresholds = -3.698253036e-01,-1.372668147e-02,-8.539077044e-01,-3.648030460e-01,-3.337253034e-01,-1.924040198e+00,-1.284451485e+00,-5.683422685e-01,-3.165947646e-02,-9.978478551e-01,-3.836105466e-01,-3.418572596e-04,-2.755770832e-02,-1.867910504e+00,-3.813807666e-01,-4.181447625e-01 +weights1 = 4.929256737e-01,-7.025263272e-03,7.393904924e-01,4.466832280e-01,4.752206504e-01,1.521736622e+00,1.085919857e+00,5.592793822e-01,-4.694884177e-03,8.259456754e-01,4.415165186e-01,-2.933311094e-10,-5.739371758e-03,1.931903720e+00,4.137595594e-01,4.328817129e-01 +biases1 = -2.682560921e+00 +weights2 = +biases2 = diff --git a/params/D00657.003.txt b/params/D00657.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..2f7b48f6a4bf5d8ef75a2aec5658ecd1cfb51650 --- /dev/null +++ b/params/D00657.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.018196392e-04,-4.194804132e-01,-1.337970898e-04,-1.271644869e-04,-5.002694577e-02,-1.973526923e-05,-5.153000951e-01,-1.868589607e-05,-2.010574639e-01,-1.584985330e-05,-4.228277802e-01,5.310877413e-02,-4.179935455e-01,-5.940197706e-01,-3.926185668e-01,4.574626312e-02 +weights1 = -2.630861010e-03,5.001921058e-01,-1.529472647e-03,-1.134024467e-03,1.452003419e-01,-2.717732150e-10,6.081717014e-01,-3.740409011e-05,3.382635415e-01,-2.423843398e-05,6.270213723e-01,2.306059748e-02,5.930205584e-01,7.446732521e-01,6.027941108e-01,2.084944025e-02 +biases1 = -2.937781215e-01 +weights2 = +biases2 = diff --git a/params/D00658.003.txt b/params/D00658.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..84f155b1dbca462f8245d3576ee824d9d8b5e9f5 --- /dev/null +++ b/params/D00658.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -7.698722929e-02,-4.761975631e-02,-6.491715461e-02,-5.238998681e-02,-2.045450360e-02,-1.916373440e-04,-2.454046346e-02,-7.934841514e-02,-2.153542452e-02,-2.453840151e-02,-5.206390098e-02,-8.192918450e-02,-5.120405927e-02,-5.966219306e-02,-5.846443400e-02,-5.262159556e-02 +weights1 = 3.666300178e-01,3.183876574e-01,3.243477941e-01,2.483465672e-01,2.179093659e-01,2.425755262e-01,3.300763965e-01,4.375331700e-01,1.870022267e-01,1.665694267e-01,4.715564549e-01,4.387364984e-01,4.098194838e-01,3.141221404e-01,3.589908481e-01,3.022081256e-01 +biases1 = -1.135181904e+00 +weights2 = +biases2 = diff --git a/params/D00659.002.txt b/params/D00659.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..177f00a92265a2f124cdd598ab027e0dd99b67af --- /dev/null +++ b/params/D00659.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 7.735199295e-03,-1.497441065e-02,8.996805991e-05,2.982578473e-03,2.864930406e-02,1.582738696e-05,-4.278636724e-02,1.777555299e-04,-3.450655565e-02,-1.242340580e-01,-2.505319193e-02,-6.633352488e-03,-6.017865241e-02,-4.798246175e-02,-9.511669725e-02,-1.191718271e-03,-4.054437950e-02,-4.662488028e-02,4.080482759e-03,-4.716809466e-02,-2.266504429e-02,1.220954116e-02,2.446469618e-03,-6.756731123e-02,-4.945879802e-03,-1.688447628e-05,5.802392261e-04,-6.823543459e-02,5.961626302e-04,-2.857368672e-04,-1.247478928e-02,-3.971568774e-03 +weights2 = -2.611429617e-02,-2.130466327e-02,-1.340265735e-03,-2.714315616e-02,1.185969561e-01,-1.647452475e-03,2.822101302e-02,2.449119836e-02,5.953287482e-01,1.374595046e+00,2.713016570e-01,-1.987518556e-02,3.267201185e-01,5.481178761e-01,9.932672381e-01,-3.585999832e-02,4.698940217e-01,5.811212659e-01,-1.484473795e-02,-2.573578060e-02,-1.321355067e-02,-1.793630607e-02,-2.539146133e-02,6.797452569e-01,8.857060224e-03,9.510250762e-03,1.651249230e-01,8.597304225e-01,-6.461705081e-03,1.371509582e-02,2.032316625e-01,3.620592654e-01 +biases2 = -1.743265867e+00 diff --git a/params/D00660.005.txt b/params/D00660.005.txt new file mode 100644 index 0000000000000000000000000000000000000000..8c6b7781c5ce1747a8a5d72e4b750102684a4d8d --- /dev/null +++ b/params/D00660.005.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -8.518333733e-02,-5.293051712e-03,-1.353034228e-01,-1.270145655e+00,-2.938748803e-03,-1.076278985e-01,-6.718768179e-02,-2.160949856e-01,-3.280361742e-02,-9.335668758e-03,-1.307802796e-01,-1.296488941e-01,-2.092030346e-01,-1.606689990e-01,-1.325701624e-01,-3.313461784e-03 +weights1 = 3.652961254e-01,-4.322289193e-09,4.537405372e-01,1.840401053e+00,3.371118495e-09,3.705582321e-01,2.539566457e-01,5.538135171e-01,1.066518128e-01,-3.810374299e-03,4.385603964e-01,4.064091444e-01,4.690590799e-01,5.060696602e-01,4.420431554e-01,2.721687542e-09 +biases1 = -8.942213058e-01 +weights2 = +biases2 = diff --git a/params/D00660.007.txt b/params/D00660.007.txt new file mode 100644 index 0000000000000000000000000000000000000000..10ecea8e0595d330c10884d3544f3485aba218cd --- /dev/null +++ b/params/D00660.007.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -8.809871674e-01,-1.202727079e+00,-1.501094957e-04,-1.257841706e+00,-6.690199370e-05,-1.446274877e+00,-1.105742558e-04,-2.011826038e+00,-1.111423254e+00,-6.757421215e-05,-1.728184104e+00,-6.971015682e-05,-6.720241072e-05,-1.877188087e+00,-1.160035899e-04,-1.462253332e+00 +weights1 = 1.150159597e+00,1.528170705e+00,-7.718522684e-04,1.496776342e+00,-1.469411509e-04,1.748509645e+00,-3.128773533e-04,2.305591583e+00,1.257375360e+00,-9.818695253e-05,2.022538900e+00,-3.113338316e-04,-1.059885399e-04,2.195693731e+00,-3.558779135e-04,1.673233032e+00 +biases1 = -2.622167826e+00 +weights2 = +biases2 = diff --git a/params/D00661.003.txt b/params/D00661.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..5b7d0b870cefb67d6f9414831560fef5b8901290 --- /dev/null +++ b/params/D00661.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.306512475e+00,-5.028158426e-01,-1.129201576e-01,-2.737097144e-01,-2.122159749e-01,-1.816810250e+00,-4.465241730e-01,-7.855659127e-01,-1.959076226e-01,-3.234934509e-01,-2.024563700e-01,-3.589151800e-01,-1.654888242e-01,-4.473414272e-03,-1.242784783e-01,-2.701048851e-01 +weights1 = 1.895876646e+00,7.265959978e-01,2.788438499e-01,6.837829947e-01,5.006044507e-01,2.591588497e+00,6.674954891e-01,1.145682931e+00,5.663995147e-01,4.483481050e-01,5.330447555e-01,5.018044710e-01,4.867869318e-01,-1.854354014e-05,4.145539403e-01,6.444557905e-01 +biases1 = -2.066526175e+00 +weights2 = +biases2 = diff --git a/params/D00662.003.txt b/params/D00662.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..2824512c70d76611c9b5073bf648d297d4dcea41 --- /dev/null +++ b/params/D00662.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -5.614453554e-01,-9.290511608e-01,-1.187157512e+00,-3.451378942e-01,-4.428524375e-01,-4.915332794e-01,-8.439908028e-01,-3.468306363e-01,-9.669487476e-01,-4.716050625e-01,-4.100344777e-01,-8.583385348e-01,-1.160399079e+00,-5.044692755e-01,-1.064184070e+00,-1.690764427e+00 +weights1 = 1.118605375e+00,1.099458098e+00,1.313123107e+00,6.745377183e-01,9.104278088e-01,9.290143251e-01,1.127029777e+00,7.420080900e-01,1.212639213e+00,9.905654192e-01,9.402995706e-01,1.475168705e+00,1.406055927e+00,9.589500427e-01,1.496547937e+00,1.697700977e+00 +biases1 = -5.080065727e+00 +weights2 = +biases2 = diff --git a/params/D00663.002.txt b/params/D00663.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..0496937c7eb1807a6708ed631bd08a58fbaea1a3 --- /dev/null +++ b/params/D00663.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.056670040e-01,-2.316892892e-01,-8.346928516e-04,-2.402859827e-04,-2.858657241e-01,-2.430568933e-01,-2.761287093e-01,-4.534562468e-04,-3.156728344e-04,-5.780732608e-04,-1.999671161e-01,-1.648483276e-01,-2.430487871e-01,-1.513960597e-04,-3.881038283e-04,-2.373273522e-01 +weights1 = 3.759641051e-01,3.410481811e-01,-8.567402139e-03,-2.663662424e-03,4.554941058e-01,3.549298346e-01,3.948956728e-01,-6.068960764e-03,-3.504849970e-03,-8.617985994e-03,3.745969832e-01,3.288426995e-01,3.456437886e-01,-1.683491282e-03,-4.305732436e-03,3.816273212e-01 +biases1 = -2.932660580e-01 +weights2 = +biases2 = diff --git a/params/D00664.002.txt b/params/D00664.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..a242136156a7cabb08a9cf53a5bd34e922c6f1e2 --- /dev/null +++ b/params/D00664.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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4.187175632e-01,1.461087610e-03,2.869880199e-01,-2.276115818e-03,1.209457397e+00,7.010877132e-02,5.302971974e-02,-9.178148583e-03,1.017406210e-01,-9.961214848e-03,3.987591863e-01,4.866023064e-01,8.119323254e-01,-5.800214410e-02,6.697281599e-01,7.019793391e-01,5.300716497e-03,5.163022876e-01,9.722858667e-01,8.828277886e-02,-4.353132681e-04,4.801791627e-03,-2.452035248e-02,-1.532267034e-01,-3.482956090e-04,1.799639910e-01,-9.432216175e-03,1.532681465e+00,1.737994025e-03,-7.201565802e-02,2.306185216e-01,1.591724576e-03 +biases2 = -2.948610067e+00 diff --git a/params/D00665.002.txt b/params/D00665.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..238cf62d71200ea34c44d561244c867b23026172 --- /dev/null +++ b/params/D00665.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = 2.543945238e-02,-2.882016301e-01,2.471628226e-02,6.942769513e-03,-3.150568902e-01,3.534355015e-02,3.137356788e-02,4.399735108e-02,2.237147465e-02,3.265090659e-02,1.599832997e-02,1.983816177e-02,3.582971171e-02,1.697742753e-02,3.795343637e-02,3.825637698e-02 +weights1 = 1.444991082e-01,1.059524417e+00,1.174153611e-01,1.759040952e-01,1.003615260e+00,8.485213667e-02,1.129287556e-01,7.972247899e-02,2.237342671e-02,1.046943814e-01,1.820126623e-01,1.367681772e-01,8.023304492e-02,1.792263240e-02,8.278701454e-02,5.745175481e-02 +biases1 = -7.369117737e-01 +weights2 = +biases2 = diff --git a/params/D00666.002.txt b/params/D00666.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..6c24e2d937e73550f6a9b9f46f4bc6eba5366fcd --- /dev/null +++ b/params/D00666.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+thresholds = -1.297416538e-01,-2.131201513e-02,-1.865481585e-01,-5.828542709e-01,-1.747552603e-01,-1.759838462e-01,-3.203898966e-01,-7.239332795e-02,-7.077627629e-02,-1.702903360e-01,-9.713912755e-02,-1.022744924e-01,-9.455771744e-02,-4.217975438e-01,-6.200276613e-01,-5.016458780e-02 +weights1 = 3.664235175e-01,9.527049959e-02,5.095624328e-01,1.106400251e+00,4.644255340e-01,4.966645241e-01,6.188801527e-01,2.050683200e-01,3.888799250e-01,5.402199626e-01,3.058632314e-01,3.863868713e-01,3.299428821e-01,8.352189660e-01,1.145631552e+00,1.660814881e-01 +biases1 = -9.070822597e-01 +weights2 = +biases2 = diff --git a/params/D00668.003.txt b/params/D00668.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..82965fcb44d01885dbd71a4c14ace3e4290f760d --- /dev/null +++ b/params/D00668.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 5.317219766e-04,8.438129043e-06,2.634006552e-02,1.132539511e-01,1.464860630e-03,-3.911209106e-02,1.788105667e-01,-1.291043591e-02,-1.464336856e-05,2.879801672e-03,4.940908030e-02,1.470406353e-01,4.687698092e-03,-1.172181293e-01,1.112108864e-02,-5.152062047e-03,2.136894874e-02,-2.412176691e-02,-9.060329199e-02,-1.415789034e-02,1.099798605e-01,-1.059177430e-05,0.000000000e+00,4.329584772e-04,-1.903330558e-03,6.268466241e-04,-1.204725653e-01,-1.377791017e-01,-1.944394899e-03,-2.999282815e-02,-1.005596005e-06,9.109079093e-02 +weights2 = 2.953729592e-03,8.530312916e-04,1.214068979e-01,-2.130844891e-01,-4.049556330e-03,3.953985870e-01,-4.701892436e-01,1.386499256e-01,1.041618088e-05,5.160836875e-02,5.624038577e-01,-3.827395439e-01,-3.850143403e-02,8.021736741e-01,-6.391881406e-02,1.095170528e-02,2.972486019e-01,2.334682047e-01,4.165869653e-01,5.119856913e-03,-2.400066406e-01,-4.373702686e-04,-2.036323858e-04,1.542199403e-03,-8.917752653e-03,1.066878159e-02,7.754586339e-01,9.400558472e-01,-1.645291224e-03,1.752974093e-01,-7.579207886e-05,1.171713948e+00 +biases2 = -4.387042224e-01 diff --git a/params/D00669.002.txt b/params/D00669.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..35c0780c35ffe8ef63e8b65b18cd2cbb91c1b09d --- /dev/null +++ b/params/D00669.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.278524578e-01,-2.016321719e-01,-5.723168850e-01,-9.270129204e-01,-2.554203570e-01,-3.205950260e-01,-3.702807724e-01,-1.754023731e-01,-5.527521372e-01,-2.868162394e-01,-1.482225657e-01,-4.771908224e-01,-7.579492331e-01,-2.791834772e-01,-1.653705686e-01,-7.938174605e-01 +weights1 = 6.686772704e-01,5.370597839e-01,1.050158024e+00,1.632280231e+00,5.669403672e-01,5.808930993e-01,7.113398910e-01,4.987793267e-01,1.075634837e+00,5.379086733e-01,5.411034822e-01,8.240281940e-01,1.322788358e+00,5.219141245e-01,4.473043978e-01,1.263763428e+00 +biases1 = -1.785682082e+00 +weights2 = +biases2 = diff --git a/params/D00670.002.txt b/params/D00670.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..3ca1f47a3e6135339859cacf70bb0f11519ca3fe --- /dev/null +++ b/params/D00670.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.360814571e-01,-1.587863415e-01,-1.133990288e-01,-5.429622903e-02,-1.366965920e-01,-3.451594114e-01,-1.368009448e-01,-5.959635228e-02,-2.246978693e-02,-7.488542050e-02,-8.257021010e-02,-7.514552027e-02,-1.234690025e-01,-1.171024051e-02,-1.035556123e-01,-5.065019801e-02 +weights1 = 4.430932701e-01,4.360545576e-01,3.156370521e-01,2.765678465e-01,4.648361802e-01,7.453545332e-01,4.424972534e-01,2.526501715e-01,1.252035052e-01,3.054711521e-01,3.648043871e-01,3.425497413e-01,4.696972072e-01,3.990185559e-01,5.888494253e-01,3.102707863e-01 +biases1 = -1.493800521e+00 +weights2 = +biases2 = diff --git a/params/D00671.003.txt b/params/D00671.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..896c97f83e19f130ae91271841ab8aedeb682053 --- /dev/null +++ b/params/D00671.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.321753711e-01,-1.011558548e-01,-1.939150505e-02,-9.954354027e-04,-1.411017263e-03,-3.845179453e-03,-6.348816305e-02,-1.243725768e-03,-1.904161531e-03,-3.887081891e-02,-2.382386010e-03,-2.828569710e-01,-5.540088192e-02,-1.277903169e-01,-2.063340740e-03,-1.711631892e-03 +weights1 = 4.954067171e-01,4.297349453e-01,1.554069519e-01,-2.959927369e-04,-1.770925475e-03,-8.441891521e-03,3.196968436e-01,-5.745202070e-04,-2.720626304e-03,2.566171885e-01,-5.328891799e-03,6.375761628e-01,5.779471397e-01,6.870360374e-01,-2.928455593e-03,-3.690775717e-03 +biases1 = -1.023284435e+00 +weights2 = +biases2 = diff --git a/params/D00672.001.txt b/params/D00672.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..ae56a989832eeba70d132fb6e930170ed92f49b1 --- /dev/null +++ b/params/D00672.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 5.553620867e-04,-2.976983553e-03,-1.708651632e-01,3.156565654e-04,-1.647981852e-01,1.363045275e-01,1.508324295e-01,1.732839519e-05,-8.373114280e-03,-1.026882008e-01,-4.218916061e-08,-5.714097992e-02,6.433308125e-03,-4.813349247e-02,-1.214390546e-01,7.415794090e-10,-3.606445855e-03,-1.462253481e-01,-1.593808644e-02,-4.664600226e-07,-3.838624805e-02,2.378101053e-04,-7.537928224e-02,1.133759245e-01,-6.163389981e-02,1.671145903e-03,2.222720347e-02,-4.317789674e-01,-7.086725533e-02,1.876414716e-01,8.906751781e-09,5.322961370e-04 +weights2 = -2.231738290e-05,-3.195795044e-02,4.667118192e-01,-1.114188830e-08,4.829472005e-01,2.593346238e-01,3.404566050e-01,-4.568159929e-04,-4.775266647e-01,-5.174674392e-01,-1.016822981e-08,2.861193419e-01,1.727239788e-01,3.361509442e-01,4.256826043e-01,2.967870785e-07,-2.290604264e-01,4.753304124e-01,-2.921318114e-01,1.283456275e-08,-3.065466285e-01,7.953487802e-04,1.338614821e-01,4.750311375e-01,4.122555852e-01,-4.819565191e-08,-1.425571144e-01,7.005357146e-01,4.842452109e-01,4.103666544e-01,-2.021775458e-08,7.971982996e-06 +biases2 = -3.331896067e-01 diff --git a/params/D00673.001.txt b/params/D00673.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..f52e53596defdb852f7bfdaadd3471b8f399d314 --- /dev/null +++ b/params/D00673.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 9.086810052e-02,9.824108332e-03,1.184763238e-01,-8.773830486e-04,2.760395966e-02,4.661135375e-03,4.685018212e-02,2.468720451e-02,1.741399616e-02,0.000000000e+00,5.405576758e-06,1.839484903e-04,7.559145987e-02,0.000000000e+00,1.241119662e-06,0.000000000e+00,1.353242435e-02,3.923128545e-02,-1.791924983e-02,1.929193549e-02,2.845315635e-02,-1.173756231e-10,3.081973456e-02,4.187677056e-02,3.293883428e-02,3.514282033e-02,7.951285224e-04,1.374339759e-01,-7.671432942e-02,5.271198601e-02,-1.256566122e-02,-6.734528579e-03 +weights2 = -2.396268547e-01,-2.546889894e-02,-2.480937988e-01,4.146738648e-01,1.255286634e-01,-2.218731679e-03,-7.296643406e-02,4.714930654e-01,7.837550044e-01,-1.477557454e-08,1.488313295e-08,-6.945476343e-05,-1.464750618e-01,-3.157126827e-08,-2.218054540e-08,1.098552893e-08,-3.744752705e-02,8.500984907e-01,1.013814330e+00,1.904386878e-01,3.891814947e-01,1.307953035e-08,5.480073094e-01,7.993606925e-01,5.271869302e-01,-9.113317728e-02,4.254541546e-02,-2.865418494e-01,7.048901916e-01,4.455783069e-01,2.293506712e-01,2.295804769e-01 +biases2 = -1.598271370e+00 diff --git a/params/D00674.003.txt b/params/D00674.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..848acf8efaf40f04f669aebe6bfebba45939287f --- /dev/null +++ b/params/D00674.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.274087131e-01,-1.495815963e-01,-9.852134436e-02,-7.328058127e-04,-2.169610113e-01,-7.540101558e-02,-5.940851988e-04,-1.447302699e-01,-7.802912733e-04,-1.512975083e-03,-4.725404456e-02,-2.290834635e-01,-9.844843298e-04,-9.045491461e-04,-4.863854498e-02,-1.672020406e-01 +weights1 = 4.687839746e-01,5.910515785e-01,4.712020755e-01,-1.881138654e-03,6.625152826e-01,3.031868041e-01,-3.516216995e-03,4.980058074e-01,-2.613435965e-03,5.941649433e-03,1.910125017e-01,6.921561956e-01,-5.583579652e-03,-2.533152234e-03,2.098763436e-01,6.135165095e-01 +biases1 = -1.108955383e+00 +weights2 = +biases2 = diff --git a/params/D00675.001.txt b/params/D00675.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..d0c2ceac31119480e9ed74797b93e00c0c51fca1 --- /dev/null +++ b/params/D00675.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -9.137537330e-03,0.000000000e+00,1.159168184e-01,-1.185166984e-04,1.851989143e-02,-1.280394197e-02,7.177600492e-05,-1.363589335e-02,9.842514373e-06,5.039011128e-03,-2.682120726e-02,0.000000000e+00,-1.168059558e-02,3.481619805e-02,-3.156499879e-04,0.000000000e+00,1.453587447e-05,2.276166342e-02,-1.602943614e-02,3.897606803e-05,1.629154980e-01,-1.903255098e-02,-3.226124495e-02,2.556665568e-04,1.234792173e-01,2.244434552e-03,-1.028037071e-02,0.000000000e+00,-1.402374037e-04,2.668154240e-02,-1.671029963e-06,1.429939643e-02 +weights2 = 2.601465955e-02,-1.190544385e-02,3.617795408e-01,-1.820215024e-02,8.219977468e-02,4.925515130e-02,1.041812473e-03,6.645209342e-02,6.550225662e-04,7.391526550e-02,4.842154682e-02,6.919087376e-03,6.603941787e-03,1.271918565e-01,-1.688942686e-02,2.401426202e-03,6.047058385e-03,5.957853049e-02,-9.632476605e-03,1.214202959e-02,3.436361253e-01,-2.889886312e-02,6.102421135e-02,4.542714916e-03,3.776202500e-01,2.608489245e-02,-2.839747444e-02,-1.053612307e-02,-6.736830343e-03,4.061666504e-02,-2.092168666e-03,1.865239814e-02 +biases2 = -4.990149736e-01 diff --git a/params/D00676.002.txt b/params/D00676.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..1aee8b0f02fa75df59569ce14b414cdc803e543f --- /dev/null +++ b/params/D00676.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 3.282925859e-02,-4.225528613e-02,-2.108448595e-01,-1.063526608e-03,1.956197806e-02,-5.393446772e-04,-1.083286852e-02,5.204647034e-02,-6.566318870e-02,1.354233623e-01,-1.704698312e-03,-1.802625805e-01,8.552867174e-02,-7.632464636e-03,4.255499691e-02,-5.173729733e-02,2.316871658e-02,-8.110904694e-02,-2.360615879e-02,-1.163509190e-01,7.961543649e-02,-9.285015985e-03,-6.788195670e-02,1.725301333e-02,-7.933123410e-02,-3.729161993e-02,1.074916571e-01,-8.562494814e-02,-3.383390009e-01,-1.450640857e-01,-3.900055587e-02,-2.297297716e-01 +weights2 = -4.099065065e-02,2.025240064e-01,1.043632030e+00,-4.600932822e-02,-9.290219843e-02,3.334174305e-02,5.630841106e-02,-9.559869021e-02,-9.502732754e-02,-1.630211323e-01,-2.254847437e-02,8.918583989e-01,-1.008035019e-01,3.251962736e-02,-5.052864552e-02,2.569153309e-01,-1.055218205e-01,4.066981375e-01,-3.508739546e-02,-1.661009192e-01,-1.665335149e-01,-2.023752928e-01,3.329643011e-01,-5.080739409e-02,3.953534365e-01,1.845635623e-01,-1.302293092e-01,4.247123301e-01,1.672696829e+00,7.228028774e-01,1.941148341e-01,1.138495922e+00 +biases2 = -2.771106958e+00 diff --git a/params/D00677.003.txt b/params/D00677.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..c05d5472f3e9c4aa705425d8152148d4f51a050c --- /dev/null +++ b/params/D00677.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -8.800417185e-01,-3.286691308e-01,-3.014963865e-01,-1.482456923e-01,-8.200550079e-01,-1.457680613e-01,-3.012483716e-01,-3.638511896e-01,-3.392992914e-01,-1.222221926e-01,-1.642582715e-01,-6.394705772e-01,1.599416137e-03,-1.865777373e-01,-5.409919024e-01,-7.044557333e-01 +weights1 = 1.277423382e+00,5.653380752e-01,6.357360482e-01,4.940419197e-01,1.226079345e+00,4.094266891e-01,6.170168519e-01,5.891312361e-01,5.113338232e-01,2.979623675e-01,4.444217384e-01,8.892012239e-01,-4.728059139e-06,4.735921323e-01,8.148584962e-01,1.001621246e+00 +biases1 = -9.945604801e-01 +weights2 = +biases2 = diff --git a/params/D00678.001.txt b/params/D00678.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..19e6026ecc11dcc84676e274cb1764eefbd849ed --- /dev/null +++ b/params/D00678.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -8.975886158e-05,-2.741487026e-01,-3.973273635e-01,-6.859839777e-05,-1.293841196e-04,7.478659390e-04,-1.031231165e+00,-2.588869929e-01,-2.580943406e-01,-9.871644378e-01,-4.931722879e-01,-3.745911121e-01,-4.465942766e-05,-1.064013600e+00,-2.199018151e-01,-1.016726746e-04 +weights1 = 2.909850316e-08,3.180689514e-01,3.590526581e-01,-1.772922360e-07,-1.869760382e-07,-3.341999104e-07,1.192628384e+00,3.820160329e-01,2.608341575e-01,1.286528111e+00,5.703759193e-01,4.658870995e-01,2.002730071e-07,1.379073262e+00,3.147689700e-01,1.791707547e-07 +biases1 = -1.001263618e+00 +weights2 = +biases2 = diff --git a/params/D00679.004.txt b/params/D00679.004.txt new file mode 100644 index 0000000000000000000000000000000000000000..1bf2e1cf3979fb441088aa6bee37d55bcb7b8194 --- /dev/null +++ b/params/D00679.004.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 7.842249516e-09,1.394298077e-01,-1.722537726e-01,6.475771443e-06,-1.858451813e-01,-1.089781001e-01,-3.565602601e-01,-1.805194188e-05,-3.561424211e-10,1.445281953e-01,-8.727732347e-05,1.848704478e-08,2.431425905e-08,-1.251280111e-07,-1.051992360e-08,-4.293206930e-01,5.949119597e-08,-9.585654936e-09,-3.987165391e-01,-2.743208408e-01,9.232195467e-02,-1.207342721e-04,4.876204684e-08,-1.333551918e-04,2.200094151e-08,2.798612416e-02,2.135985047e-01,-1.635520130e-05,-6.270878315e-01,-5.769096606e-05,-7.482532965e-05,-6.262315583e-05 +weights2 = 1.351169203e-07,-1.018980294e-01,4.885422587e-01,-1.314360674e-07,5.291393399e-01,2.918337882e-01,1.082153916e+00,4.307380763e-08,-5.392257307e-08,-1.066979915e-01,-3.156584327e-08,2.459245962e-08,1.120644768e-07,-1.617630119e-07,-1.314368632e-07,1.315204501e+00,1.633686075e-08,-2.712384806e-08,1.216048717e+00,8.180128932e-01,-5.176757649e-02,3.126313004e-07,5.894800736e-08,-4.166329148e-08,5.879237008e-08,1.868060463e-05,-1.793089211e-01,1.482060270e-07,1.952302933e+00,1.155558721e-06,2.052517658e-07,1.316823983e-09 +biases2 = -3.669713497e+00 diff --git a/params/D00680.001.txt b/params/D00680.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..4f9cac6aa25ddc3f8c52536c39854e8dc9487605 --- /dev/null +++ b/params/D00680.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 4.724779632e-03,-3.061833559e-03,-5.069871992e-02,-6.800815463e-03,2.092534676e-02,4.088333249e-02,2.364150062e-02,-5.939488183e-04,-3.372053429e-02,7.013324648e-03,-1.608641446e-02,-2.685153112e-02,2.198018832e-03,1.083894074e-02,-1.597878523e-02,-1.448999625e-02,-2.781930380e-03,-1.272562798e-02,9.029498324e-03,8.205058984e-03,-3.633995354e-02,-5.457913131e-02,-7.175275590e-03,-1.269640028e-02,-3.369862214e-02,-1.013536192e-02,2.894064877e-03,1.223247591e-02,-3.745480254e-02,-1.308166385e-01,-6.388190202e-03,2.837578021e-02 +weights2 = -1.114417892e-02,9.254168719e-03,-2.722086385e-02,-1.039834879e-02,-2.647628263e-02,7.571600676e-01,7.187628071e-04,-2.726265229e-03,9.973973632e-01,7.783315182e-01,1.055990934e+00,-1.685058326e-02,-4.519649316e-03,3.693774343e-02,-2.461479232e-02,-1.914849319e-02,-7.196628954e-03,-3.849636391e-02,-3.109459393e-02,3.880026937e-02,-1.217456162e-02,1.335377216e+00,-5.624866858e-02,2.516892552e-01,9.892237186e-01,1.701025218e-01,-3.023790009e-02,-9.086052328e-02,-4.051547870e-02,8.620247245e-01,2.088881657e-02,-5.905536190e-02 +biases2 = -9.241362810e-01 diff --git a/params/D00681.002.txt b/params/D00681.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..ad98a74f36d159ef5de99aee594620f06d078e3f --- /dev/null +++ b/params/D00681.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -2.486273479e-05,-1.851593852e+00,-3.548517416e-04,-4.526400298e-04,-3.465688205e-04,-1.562763791e-04,-9.159978479e-02,-8.808261752e-01,-1.460553855e-01,-1.741313338e-01,-3.022846067e-04,-2.441432443e-04,-1.516045779e-01,-1.403350034e-04,-1.428417861e-01,-1.683497727e-01 +weights1 = -2.042143897e-04,2.729902267e+00,-2.947477158e-03,-3.761021653e-03,-3.065093188e-03,-1.297781477e-03,1.983345598e-01,1.373220205e+00,5.616703629e-01,5.695127249e-01,-2.510155551e-03,-2.026471775e-03,4.680206180e-01,-1.165151130e-03,5.006582737e-01,5.787854791e-01 +biases1 = -1.504416347e+00 +weights2 = +biases2 = diff --git a/params/D00681.004.txt b/params/D00681.004.txt new file mode 100644 index 0000000000000000000000000000000000000000..a2a8a71656dbb4c1aefcd3685c9104abc40e1e43 --- /dev/null +++ b/params/D00681.004.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 2.746021003e-02,-7.021307829e-04,-4.243809581e-01,-4.131528549e-03,-1.050106343e-02,-1.116539001e+00,-2.995096147e-03,6.342418055e-05,-5.384214222e-03,-4.501942312e-04,-1.944404561e-03,-2.147288295e-03,3.800388426e-02,2.736184373e-02,3.964319453e-02,-1.286011538e-03,-6.557645798e-01,-1.181124151e-01,-3.026559250e-03,-3.287189174e-03,-2.462031841e-01,-7.700434327e-01,-5.281540751e-01,-4.769960940e-01,1.353327389e-04,-4.166987128e-05,2.327216975e-02,-6.756882071e-01,1.169994567e-02,-1.805414504e-04,3.614963265e-03,-2.021814929e-03 +weights2 = -2.828658745e-02,1.804925851e-03,4.998573959e-01,-7.677898277e-03,2.942374721e-02,1.431856871e+00,2.362470608e-03,1.005071215e-03,-4.774349742e-03,1.444881898e-03,-1.091017202e-02,-5.103094038e-03,-3.745437786e-02,-2.768207341e-02,-3.818042204e-02,-6.347106770e-03,8.401896358e-01,1.519227624e-01,-6.964765489e-03,-7.555529475e-03,3.131865859e-01,9.851419330e-01,6.209779978e-01,6.208690405e-01,1.743275300e-02,4.835492000e-03,-2.470431849e-02,8.667911887e-01,-1.070048846e-02,2.227061195e-03,-5.001978017e-03,-2.015421400e-03 +biases2 = -3.082810879e+00 diff --git a/params/D00682.002.txt b/params/D00682.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..ff7fe13b80ec386814c08c006f842edef7ba6cec --- /dev/null +++ b/params/D00682.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -1.099115238e-02,-8.775371313e-01,-5.491431355e-01,-2.190705761e-02,-3.724884664e-06,-8.850482106e-02,8.462336846e-04,-4.266942415e-05,-1.287752204e-02,7.676803216e-05,-4.136824515e-03,6.583667709e-05,-6.553087151e-04,5.944581426e-05,-2.091650218e-01,6.931154057e-04,-3.256479502e-01,-4.831300080e-01,-3.240546286e-01,-1.078985095e+00,4.804799755e-05,-3.212046431e-05,-8.308018005e-05,-5.136000709e-06,-6.660138606e-04,-1.070595681e-05,-1.625414044e-01,-2.906044529e-06,-1.659949157e-05,-4.793220342e-06,-3.187338114e-01,-4.801413525e-06 +weights2 = 8.528023958e-02,-1.797226191e+00,1.052433610e+00,1.388124973e-01,-8.889859600e-05,2.331454754e-01,5.559267083e-05,-7.446674135e-05,8.307514340e-02,-3.816712124e-04,4.386216402e-02,5.640094605e-05,5.629517138e-03,2.007653820e-04,4.791808724e-01,7.401299081e-04,6.735238433e-01,9.371845722e-01,6.425884366e-01,1.927250862e+00,2.095417403e-05,-1.577676856e-03,-4.039101303e-03,-3.103907220e-04,9.577422170e-04,-5.139349378e-04,4.163764417e-01,-7.518725761e-05,-8.774602320e-04,2.969762718e-04,6.698850393e-01,-2.847624419e-04 +biases2 = -1.390104648e-02 diff --git a/params/D00683.002.txt b/params/D00683.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..8403255f537fb6201c6df5cc66dfda88f837e504 --- /dev/null +++ b/params/D00683.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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2.300988287e-01,-7.166086435e-01,4.006004747e-05,1.695569456e-01,2.028931975e-01,1.009805083e+00,4.715243354e-02,-5.376562104e-02,7.462185621e-01,6.701774964e-06,-5.895166993e-01,-7.814707160e-01,-1.256265136e-06,3.532235026e-01,-2.422210015e-02,-6.789995730e-02,-1.099028349e+00,3.045122623e-01,8.863033056e-01,-3.237675428e-01,3.845938444e-01,8.443573713e-01,-5.736016533e-07,-5.100774169e-01,1.382584810e+00,5.562648177e-01,-1.359825730e-01,-5.799493939e-02,1.425826829e-02,-4.450257123e-02,1.750907600e-01,-4.018941522e-01 +biases2 = -9.201032519e-01 diff --git a/params/D00683.007.txt b/params/D00683.007.txt new file mode 100644 index 0000000000000000000000000000000000000000..6f674d0c5610c65ba7043d2437515a5f56e9145b --- /dev/null +++ b/params/D00683.007.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.092192292e+00,-3.180657327e-01,-6.438191533e-01,-7.966291904e-01,-7.203446031e-01,-1.100778699e+00,-1.803416491e+00,-7.093878388e-01,-8.758423328e-01,-5.709239841e-01,-4.858607650e-01,-1.557012320e+00,-9.748442173e-01,-6.446450949e-01,-5.465803146e-01,-6.963353753e-01 +weights1 = 1.332295179e+00,1.030009031e+00,1.188717961e+00,1.019803643e+00,1.061949611e+00,1.442113876e+00,1.887892246e+00,9.780636430e-01,9.785867333e-01,9.497244954e-01,1.086651087e+00,2.317430496e+00,1.334765077e+00,1.004098892e+00,9.948024750e-01,1.083392978e+00 +biases1 = -5.901852131e+00 +weights2 = +biases2 = diff --git a/params/D00684.005.txt b/params/D00684.005.txt new file mode 100644 index 0000000000000000000000000000000000000000..b497f7e8cd1f415922de7b79fc1fdd359afb0e01 --- /dev/null +++ b/params/D00684.005.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 14 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 7.802560925e-02,-7.571996003e-02,1.560729146e-01,-9.720069170e-02,3.978445381e-02,-7.277064770e-02,1.695734560e-01,-8.611255325e-03,-6.195592135e-02,-6.939243525e-02,-8.291523159e-02,-5.953647997e-05,5.759600317e-04,-9.166383743e-02,-9.083169699e-02,-8.981093764e-02,-2.342611551e-03,-7.504229993e-02,5.188958645e-01,-8.184578270e-02,2.395077646e-01,1.928882301e-01,-8.298225701e-02,-3.215694334e-03,6.140207648e-01,-7.674900442e-02,-3.858382581e-03,-3.228991851e-02,-7.106407732e-02,-4.351598182e-05,6.618084311e-01,2.436513603e-01 +weights2 = -8.429982513e-02,5.072726607e-01,-1.645414829e-01,4.025855660e-01,-4.100552574e-02,5.016366243e-01,-1.838532090e-01,-1.227824949e-02,5.115317702e-01,5.050811768e-01,5.017210841e-01,-2.887232974e-02,9.413076332e-04,4.265762568e-01,3.747317493e-01,3.996154368e-01,3.334793961e-03,4.938602149e-01,-5.639686584e-01,4.880120754e-01,-2.603732347e-01,-2.172499299e-01,4.974012673e-01,-1.209463924e-01,-7.095997334e-01,4.606299400e-01,-5.187249184e-02,2.220084369e-01,5.017922521e-01,1.316011301e-03,-7.554622889e-01,-2.626388073e-01 +biases2 = -1.260968566e+00 diff --git a/params/D00685.003.txt b/params/D00685.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..4fa6c6258bdaa69aee88c9d4675afb7b2ced40ff --- /dev/null +++ b/params/D00685.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -1.040115952e-01,-2.378522791e-02,2.368314266e-01,7.220185944e-05,6.081727147e-02,1.287315099e-04,-2.178278007e-02,1.030057110e-02,8.996605175e-04,-4.399081692e-02,7.217192091e-03,1.493990654e-03,-3.160289256e-03,2.828347385e-01,-4.412433133e-03,1.082999334e-01,5.901913159e-03,2.780002542e-03,0.000000000e+00,2.539949715e-01,-5.735586584e-02,1.801242679e-01,1.193434969e-01,-1.279649674e-03,-3.121529892e-02,-1.261212770e-02,-1.313861366e-02,6.169759855e-02,-3.860382363e-02,3.451432288e-02,2.768201381e-02,-6.791450083e-02 +weights2 = 1.472511768e+00,-1.867406256e-02,-3.489474356e-01,1.119184960e-02,1.044090509e+00,1.101015508e-02,2.847611308e-01,3.056604043e-02,-5.800521001e-03,-1.655300893e-02,1.712712646e-02,1.744491756e-01,8.983568288e-03,1.161433697e+00,-2.220553756e-01,7.289302945e-01,-8.310306072e-02,-2.124200016e-02,1.794457436e-03,-5.588397980e-01,-1.436843257e-02,-4.704365432e-01,-2.090687603e-01,5.989405327e-03,2.196561247e-01,4.348904788e-01,-1.562835835e-02,5.761999488e-01,-5.135615822e-03,-8.389567584e-02,-8.418001980e-02,3.131954372e-02 +biases2 = -6.606717110e-01 diff --git a/params/D00686.002.txt b/params/D00686.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..f18a10bb60975aa0794cfa1e7a0b0967b40d9c61 --- /dev/null +++ b/params/D00686.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -3.502624333e-01,-2.150547951e-01,-4.854424298e-01,-1.398512870e-01,-2.606738508e-01,-2.089282423e-01,-2.330019474e-01,-9.480246902e-01,-2.073204070e-01,-2.920810282e-01,-1.566341072e-01,-1.523970246e+00,-6.786164641e-01,-1.777964234e-01,-1.385529488e-01,-2.081652284e-01 +weights1 = 6.541853547e-01,5.890156627e-01,7.883038521e-01,4.536232054e-01,5.941814184e-01,5.132337213e-01,5.351503491e-01,1.437553167e+00,5.894949436e-01,5.888559818e-01,5.543223619e-01,2.204628706e+00,1.126765847e+00,5.007876158e-01,5.111206174e-01,4.526955187e-01 +biases1 = -2.109682322e+00 +weights2 = +biases2 = diff --git a/params/D00687.001.txt b/params/D00687.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..0fdf0dc5dfb40f1c00beb2c5df94f28ee429310b --- /dev/null +++ b/params/D00687.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 5.291881785e-02,1.341155451e-02,1.748521609e-04,6.237175316e-03,-1.075033750e-02,2.810216509e-03,-7.836018503e-02,-1.412033010e-02,-1.167151257e-01,-3.241902292e-01,-9.679315239e-02,-9.018471465e-03,-6.210234389e-02,-1.134434491e-01,-2.504921556e-01,4.736964032e-02,-6.797507405e-02,-1.316288561e-01,1.186311804e-02,-4.610246792e-02,-1.462275162e-02,5.002288520e-02,8.348708972e-03,-1.231456921e-01,-5.224450026e-03,-6.466280902e-04,-1.611889154e-02,-2.134944648e-01,1.747896313e-04,-4.828562029e-03,-3.352657706e-02,-4.077268764e-02 +weights2 = -6.016075239e-02,-5.378274247e-02,8.060354739e-03,-3.698590025e-02,1.027092338e-02,-8.699130267e-03,-3.175436333e-02,2.009400353e-02,4.813030064e-01,1.368334651e+00,3.129501641e-01,-1.784572378e-02,2.938424051e-01,5.136435628e-01,9.441845417e-01,-6.268367916e-02,4.703406394e-01,5.751739740e-01,-3.177373111e-02,-3.664562479e-02,-1.240352262e-02,-5.361551046e-02,-3.281630576e-02,6.091232896e-01,4.196355864e-02,1.245788578e-02,1.567099690e-01,8.251143694e-01,-3.451798111e-03,1.615834981e-02,1.902962327e-01,4.013867676e-01 +biases2 = -2.470174551e+00 diff --git a/params/D00688.002.txt b/params/D00688.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..1e2f96ee1952d50566cd69f5f0eeb94ebbbab446 --- /dev/null +++ b/params/D00688.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.036149114e-01,-1.624869406e-01,-7.833847404e-02,-1.450763792e-01,-1.883498132e-01,-1.554431319e-01,-2.328779250e-01,-1.412622482e-01,-1.059650704e-01,-1.464238167e-01,-1.565661840e-02,-7.544592768e-02,-6.527568400e-02,-1.923648268e-01,-7.202254981e-02,-2.190052345e-02 +weights1 = 1.863877028e-01,2.529274225e-01,2.046840787e-01,2.926284075e-01,3.213129640e-01,2.831491530e-01,2.305802554e-01,3.306491971e-01,2.824269831e-01,2.420090437e-01,3.528694063e-02,1.527169943e-01,1.932336092e-01,2.000650465e-01,1.465160251e-01,1.058432162e-01 +biases1 = -5.859719515e-01 +weights2 = +biases2 = diff --git a/params/D00689.003.txt b/params/D00689.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..3c33a0c49eefb48af7cd8c3e485cad6209d673c8 --- /dev/null +++ b/params/D00689.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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-4.290280864e-02,1.281347394e+00,8.803604245e-01,-1.974646002e-02,-1.642523259e-01,6.865528822e-01,-2.186270803e-01,-5.802659690e-02,1.550697070e-02,2.115067095e-01,4.326125607e-03,9.171719663e-03,4.635924697e-01,5.815563798e-01,-4.112765193e-03,5.761340857e-01,2.920848131e-01,7.743870616e-01,-7.636256050e-03,8.804710233e-04,2.451301068e-01,2.940124869e-01,1.174325943e+00,-1.581824943e-02,-5.875953939e-03,4.699383378e-01,-1.686138362e-01,3.257905599e-03,2.005858812e-03,-8.499550633e-03,5.134036765e-03,-1.546215033e-03 +biases2 = -2.108036041e+00 diff --git a/params/D00690.003.txt b/params/D00690.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..9d99b7659df1cb76d8fa824e0c85babcd308423d --- /dev/null +++ b/params/D00690.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -6.992649287e-05,-3.217718750e-02,-1.698114425e-01,-1.987106949e-01,-1.706287414e-01,-1.376881003e-01,-7.544869184e-02,-1.869347394e-01,-1.109924391e-01,-1.186525300e-01,-3.987808668e-05,-7.140514255e-02,-2.560933530e-01,-2.001878056e-05,-2.696745796e-03,-3.196965205e-03 +weights1 = -8.124012966e-04,1.526979059e-01,7.297645211e-01,7.635256052e-01,8.567545414e-01,6.299572587e-01,3.857957125e-01,6.367608309e-01,5.142992735e-01,5.287436843e-01,-6.180406587e-08,3.055904210e-01,6.943178773e-01,2.631343754e-10,1.395398751e-02,1.521587558e-02 +biases1 = -1.662879586e+00 +weights2 = +biases2 = diff --git a/params/D00691.001.txt b/params/D00691.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..1cb3e157e457107fb4efaa5df93f2b56f06996cd --- /dev/null +++ b/params/D00691.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -5.186506510e-01,-5.257046819e-01,-2.448801994e-01,-3.991574943e-01,-1.592687666e-01,-3.837186098e-01,-3.709371388e-01,-2.751602232e-01,-2.351211160e-01,-2.016604543e-01,-1.798129082e-01,-2.966504395e-01,-3.236395717e-01,-8.379261009e-03,-5.192114115e-01,-1.721302867e-01 +weights1 = 4.757329822e-01,5.089257956e-01,2.578493655e-01,4.863428771e-01,2.191880941e-01,3.739818335e-01,3.875027895e-01,2.540258765e-01,2.557892799e-01,2.171781659e-01,2.298309505e-01,2.792931795e-01,3.640643656e-01,8.502283017e-04,5.399677753e-01,2.253797352e-01 +biases1 = -3.193635941e-01 +weights2 = +biases2 = diff --git a/params/D00692.002.txt b/params/D00692.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..3855b6fdc010ed9a0ed161a0312edcb05e9d9fe0 --- /dev/null +++ b/params/D00692.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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-1.046679541e-02,2.561864257e-02,2.264737338e-01,6.438645720e-01,6.767103672e-01,-1.874944717e-01,6.707695127e-01,8.814659119e-01,-4.282305390e-02,3.759063184e-01,-7.742134621e-04,-9.047205001e-02,-7.560181618e-02,5.441023037e-03,2.739802003e-01,7.832926512e-01,-2.073140442e-02,1.243611947e-01,5.839870572e-01,2.707372308e-01,2.218374902e-05,-6.900460273e-02,6.524415016e-01,-1.951902173e-03,8.056274056e-01,-4.216386378e-02,4.221152365e-01,1.181045696e-01,3.962869346e-01,8.285828233e-01,3.912410466e-04,5.642400980e-01 +biases2 = -7.325500846e-01 diff --git a/params/D00693.002.txt b/params/D00693.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..1cfbdf8acbe9801523b71f8a4b9fef7dad945275 --- /dev/null +++ b/params/D00693.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 24 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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1e-04,6.253029596e-07,-4.689960861e-06,1.263766643e-02,4.219329185e-06,4.842627794e-03,3.723730742e-06,-1.936663693e-06,2.367168918e-06,-4.115175670e-06,3.856284916e-02,-1.212531174e-06,6.203596286e-07,4.261892173e-06,-7.994563930e-06,-7.938864641e-03,-1.330810628e-04,7.717382005e-07,1.647459499e-06,1.979795285e-02,-3.623739303e-06,1.528925169e-02,-3.383630656e-07 +thresholds = 2.056917734e-02,-3.269919893e-03,-2.296194434e-03,1.762488633e-01,-2.933621407e-03,-2.953290939e-03,5.694900453e-02,2.582998574e-02,-1.595496297e+00,5.412973464e-02,-4.705697298e-03,-3.338846844e-03,1.192216426e-01,3.011310287e-02,-2.210304976e+00,-1.018698094e-03 +weights1 = 2.158406563e-02,7.993655043e-11,7.083476028e-09,6.858837605e-01,-2.709534310e-04,-4.167824227e-04,1.036162376e-01,3.232926875e-02,2.612192631e+00,1.010642126e-01,-6.459224503e-03,-1.336207381e-03,1.453757524e+00,3.991119191e-02,3.688267231e+00,7.426761872e-09 +biases1 = -1.449913621e+00 +weights2 = +biases2 = diff --git a/params/D00694.003.txt b/params/D00694.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..7cd93578e09fe95c598516000f4c02ca735cb7ec --- /dev/null +++ b/params/D00694.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = 4.955348372e-01,-2.582675777e-03,-9.002042934e-04,-8.090056479e-02,4.957101941e-01,2.512959763e-02,-3.177443985e-03,-1.512990743e-01,-3.492708784e-04,3.986632079e-02,-1.691771438e-03,1.629830920e-03,-2.750454936e-03,-1.121369302e-01,-5.108173355e-04,-1.867092848e-01,-5.746823549e-01,3.004338592e-02,-2.424708568e-03,-3.545362735e-03,-2.716488205e-03,-1.332187094e-04,-1.547338907e-03,-5.423605442e-01,1.047927290e-01,-1.741569024e-03,-9.009668720e-04,-6.463957834e-05,-1.196681410e-01,8.062335104e-02,2.139159143e-01,-1.946028671e-03 +weights2 = 7.357414961e-01,-3.278225660e-02,-9.453428909e-03,2.196768224e-01,6.783628464e-01,3.230918944e-02,-3.519624099e-02,4.187538326e-01,-2.917042002e-02,5.380069464e-02,-2.396879159e-02,-5.910293665e-03,-3.046652675e-02,-2.526737452e-01,-5.021603778e-03,5.252621174e-01,1.503509045e+00,4.153406620e-02,-2.685827576e-02,-4.497176781e-02,-3.007271886e-02,-1.472721901e-02,-1.713971980e-02,1.406163335e+00,1.444008648e-01,-2.374298871e-02,-9.715037420e-03,-3.585446253e-02,2.804542780e-01,1.115740612e-01,2.940010726e-01,-2.226472460e-02 +biases2 = -1.718499422e+00 diff --git a/params/D00695.002.txt b/params/D00695.002.txt new file mode 100644 index 0000000000000000000000000000000000000000..b53996a858aa66255c893348ed5f038261963bc5 --- /dev/null +++ b/params/D00695.002.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+biases1 = -2.153582871e-02,-2.637604997e-02,7.970243692e-03,-1.236836053e-02,8.760944009e-03,-2.050339617e-06,-8.174089342e-02,-6.208022114e-06,-1.434074044e-01,-2.040717192e-02,-6.210308149e-02,4.958815407e-05,-1.554896301e-07,-9.062907659e-03,-1.823189296e-02,-1.597663462e-01,9.726983495e-03,4.582850728e-03,-3.800611570e-02,-1.722660527e-04,-1.764004827e-01,0.000000000e+00,-3.788203597e-01,-2.700700315e-05,3.840072826e-02,8.395070583e-02,5.568663590e-03,-5.350385979e-02,1.142121837e-04,-8.542536199e-02,-1.241429970e-01,-8.425591886e-02 +weights2 = 1.067735702e-01,2.338148504e-01,-1.714796722e-01,-3.002521098e-01,1.397698075e-01,-4.988624278e-05,5.801630616e-01,-1.663556941e-05,8.553767800e-01,2.484405190e-01,-2.095621228e-01,2.124779392e-03,1.136553619e-04,2.079785168e-01,1.245478094e-01,1.266065001e+00,7.698635757e-02,1.578732394e-02,1.828558892e-01,1.650116891e-01,1.311919928e+00,-1.691502548e-04,-1.951127052e+00,3.494826087e-04,-6.649647653e-02,-7.432236075e-01,-1.675091311e-02,5.548092127e-01,1.355214864e-01,8.151112795e-01,8.575708866e-01,-3.974376619e-01 +biases2 = -6.561140064e-03 diff --git a/params/D00696.003.txt b/params/D00696.003.txt new file mode 100644 index 0000000000000000000000000000000000000000..2b8eb871535ee7d4349bb58a0051bcefe2b49f0b --- /dev/null +++ b/params/D00696.003.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 32 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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+thresholds = -4.644373655e-01,-1.545461893e+00,-1.975622028e-02,-6.376930475e-01,-1.006800056e+00,-1.419825196e+00,-1.462959528e+00,-4.166438580e-01,-4.341166615e-01,-2.832176685e-01,-4.171809852e-01,-6.396069527e-01,-1.328226686e+00,-4.149035811e-01,-1.517180681e+00,-8.651434183e-01 +weights1 = 3.853217959e-01,1.256588459e+00,-1.840764298e-06,6.864517927e-01,9.889591932e-01,1.153086185e+00,1.214609623e+00,4.129901528e-01,4.272292256e-01,4.905115962e-01,3.941487372e-01,6.679899693e-01,1.096830964e+00,4.473752975e-01,1.295626760e+00,7.439127564e-01 +biases1 = -2.168262959e+00 +weights2 = +biases2 = diff --git a/params/D00698.001.txt b/params/D00698.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..3da3aff4ed9aff6b7b164bc4018dfc7dc6598807 --- /dev/null +++ b/params/D00698.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -1.179936290e+00,-2.281904817e-01,-8.260657787e-01,-1.905183345e-01,-1.636114478e+00,-9.527986646e-01,-2.232588679e-01,-1.074567080e+00,-2.921391726e-01,-2.928840220e-01,-8.256149888e-01,-1.017673373e+00,-7.200942636e-01,-1.061742187e+00,-9.433051944e-01,-4.083756804e-01 +weights1 = 9.198346734e-01,6.435539126e-01,1.532979727e+00,5.993284583e-01,1.597475529e+00,1.752951503e+00,6.412360668e-01,1.021591306e+00,6.442068219e-01,6.030488014e-01,7.165352702e-01,8.008790016e-01,8.055898547e-01,1.110551834e+00,8.944924474e-01,6.946676373e-01 +biases1 = -4.374284267e+00 +weights2 = +biases2 = diff --git a/params/D00699.001.txt b/params/D00699.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..8eedbc53c4b23b723343cdb27bce2afdd1252e66 --- /dev/null +++ b/params/D00699.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 0 +detectors = 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+thresholds = -6.499361916e-05,-4.902920723e-01,-3.306079816e-05,-5.348664126e-05,-3.803400099e-01,-4.847241640e-01,-1.073599924e-04,-3.820965886e-01,-1.014830486e-04,-1.891643405e+00,-1.704062888e-04,-3.577688932e-01,-1.087230921e-04,-1.025512815e+00,-1.459013001e-04,-1.862122774e+00 +weights1 = 8.239470439e-09,8.277944326e-01,8.060115242e-09,-9.935333445e-09,5.929297209e-01,6.371030807e-01,2.219205653e-10,6.128363013e-01,-2.846756997e-10,2.343088150e+00,2.414262346e-09,6.656261086e-01,-5.676974002e-09,1.188607216e+00,1.007712402e-08,1.799301386e+00 +biases1 = -3.040808916e+00 +weights2 = +biases2 = diff --git a/params/D00700.001.txt b/params/D00700.001.txt new file mode 100644 index 0000000000000000000000000000000000000000..bfee5272b7ff6f09734327540c854a05bc4ce615 --- /dev/null +++ b/params/D00700.001.txt @@ -0,0 +1,12 @@ +# deepbind 0.1 +reverse_complement = 1 +num_detectors = 16 +detector_len = 20 +has_avg_pooling = 0 +num_hidden = 32 +detectors = 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