Datasets:
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README.md
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---
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license: other
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tags:
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- gwas
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- polygenic-risk-score
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- psychiatric-genetics
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- pgc
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---
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# Bipolar Disorder GWAS Summary Statistics (PGC)
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Mirror of Psychiatric Genomics Consortium (PGC) summary statistics for
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**Bipolar Disorder** (bip2019), redistributed in a single Apache Parquet file
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for use with [OpenMed Genomics](https://huggingface.co/spaces/turmex2/openneuro-genomics).
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## Source
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- **Primary citation:** Stahl et al., Nature Genetics 2019; Mullins et al., Nature Genetics 2021
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- **Original distributor:** Psychiatric Genomics Consortium
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(<https://pgc.unc.edu/for-researchers/download-results/>)
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This mirror exists only because the upstream OpenMed mirror became
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inaccessible. No modifications have been made to the underlying data;
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per-shard parquet files were concatenated into a single file for
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convenient streaming.
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## File
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`pgc-bipolar_bip2019.parquet` -- one Apache Parquet file containing the full summary
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statistics table in the PGC's published schema (SNP, CHR, BP, A1, A2,
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FRQ, OR/BETA, SE, P, ...).
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## Usage
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```python
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import polars as pl
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df = pl.read_parquet(
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"https://huggingface.co/datasets/turmex2/pgc-bipolar/resolve/main/pgc-bipolar_bip2019.parquet"
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)
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```
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## License & terms of use
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PGC summary statistics are released for non-commercial research use only.
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Do not attempt to re-identify individuals. Results derived from these
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data are **not** a clinical diagnosis. See the original publication for
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the full data-use agreement.
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