| | """This section describes unitxt loaders. |
| | |
| | Loaders: Generators of Unitxt Multistreams from existing date sources |
| | ============================================================== |
| | |
| | Unitxt is all about readily preparing of any given data source for feeding into any given language model, and then, |
| | postprocessing the model's output, preparing it for any given evaluator. |
| | |
| | Through that journey, the data advances in the form of Unitxt Multistream, undergoing a sequential application |
| | of various off the shelf operators (i.e, picked from Unitxt catalog), or operators easily implemented by inheriting. |
| | The journey starts by a Unitxt Loeader bearing a Multistream from the given datasource. |
| | A loader, therefore, is the first item on any Unitxt Recipe. |
| | |
| | Unitxt catalog contains several loaders for the most popular datasource formats. |
| | All these loaders inherit from Loader, and hence, implementing a loader to expand over a new type of datasource, is |
| | straight forward. |
| | |
| | Operators in Unitxt catalog: |
| | LoadHF : loads from Huggingface dataset. |
| | LoadCSV: loads from csv (comma separated value) files |
| | LoadFromKaggle: loads datasets from the kaggle.com community site |
| | LoadFromIBMCloud: loads a dataset from the IBM cloud. |
| | ------------------------ |
| | """ |
| | import importlib |
| | import itertools |
| | import os |
| | import tempfile |
| | from pathlib import Path |
| | from tempfile import TemporaryDirectory |
| | from typing import Dict, Mapping, Optional, Sequence, Union |
| |
|
| | import pandas as pd |
| | from datasets import load_dataset as hf_load_dataset |
| | from tqdm import tqdm |
| |
|
| | from .dataclass import InternalField |
| | from .logging_utils import get_logger |
| | from .operator import SourceOperator |
| | from .settings_utils import get_settings |
| | from .stream import MultiStream, Stream |
| |
|
| | logger = get_logger() |
| | settings = get_settings() |
| |
|
| | try: |
| | import ibm_boto3 |
| |
|
| | ibm_boto3_available = True |
| | except ImportError: |
| | ibm_boto3_available = False |
| |
|
| |
|
| | class Loader(SourceOperator): |
| | |
| | |
| | |
| | |
| | |
| | |
| | loader_limit: int = None |
| | streaming: bool = False |
| |
|
| | def get_limit(self): |
| | if settings.global_loader_limit is not None and self.loader_limit is not None: |
| | return min(int(settings.global_loader_limit), self.loader_limit) |
| | if settings.global_loader_limit is not None: |
| | return int(settings.global_loader_limit) |
| | return self.loader_limit |
| |
|
| | def get_limiter(self): |
| | if settings.global_loader_limit is not None and self.loader_limit is not None: |
| | if int(settings.global_loader_limit) > self.loader_limit: |
| | return f"{self.__class__.__name__}.loader_limit" |
| | return "unitxt.settings.global_loader_limit" |
| | if settings.global_loader_limit is not None: |
| | return "unitxt.settings.global_loader_limit" |
| | return f"{self.__class__.__name__}.loader_limit" |
| |
|
| | def log_limited_loading(self): |
| | logger.info( |
| | f"\nLoading limited to {self.get_limit()} instances by setting {self.get_limiter()};" |
| | ) |
| |
|
| |
|
| | class LoadHF(Loader): |
| | path: str |
| | name: Optional[str] = None |
| | data_dir: Optional[str] = None |
| | split: Optional[str] = None |
| | data_files: Optional[ |
| | Union[str, Sequence[str], Mapping[str, Union[str, Sequence[str]]]] |
| | ] = None |
| | streaming: bool = True |
| | _cache: dict = InternalField(default=None) |
| |
|
| | def stream_dataset(self): |
| | if self._cache is None: |
| | with tempfile.TemporaryDirectory() as dir_to_be_deleted: |
| | try: |
| | dataset = hf_load_dataset( |
| | self.path, |
| | name=self.name, |
| | data_dir=self.data_dir, |
| | data_files=self.data_files, |
| | streaming=self.streaming, |
| | cache_dir=None if self.streaming else dir_to_be_deleted, |
| | split=self.split, |
| | trust_remote_code=settings.allow_unverified_code, |
| | ) |
| | except ValueError as e: |
| | if "trust_remote_code" in str(e): |
| | raise ValueError( |
| | f"{self.__class__.__name__} cannot run remote code from huggingface without setting unitxt.settings.allow_unverified_code=True or by setting environment vairable: UNITXT_ALLOW_UNVERIFIED_CODE." |
| | ) from e |
| |
|
| | if self.split is not None: |
| | dataset = {self.split: dataset} |
| |
|
| | self._cache = dataset |
| | else: |
| | dataset = self._cache |
| |
|
| | return dataset |
| |
|
| | def load_dataset(self): |
| | if self._cache is None: |
| | with tempfile.TemporaryDirectory() as dir_to_be_deleted: |
| | try: |
| | dataset = hf_load_dataset( |
| | self.path, |
| | name=self.name, |
| | data_dir=self.data_dir, |
| | data_files=self.data_files, |
| | streaming=False, |
| | keep_in_memory=True, |
| | cache_dir=dir_to_be_deleted, |
| | split=self.split, |
| | trust_remote_code=settings.allow_unverified_code, |
| | ) |
| | except ValueError as e: |
| | if "trust_remote_code" in str(e): |
| | raise ValueError( |
| | f"{self.__class__.__name__} cannot run remote code from huggingface without setting unitxt.settings.allow_unverified_code=True or by setting environment vairable: UNITXT_ALLOW_UNVERIFIED_CODE." |
| | ) from e |
| | if self.split is None: |
| | for split in dataset.keys(): |
| | dataset[split] = dataset[split].to_iterable_dataset() |
| | else: |
| | dataset = {self.split: dataset} |
| |
|
| | self._cache = dataset |
| | else: |
| | dataset = self._cache |
| |
|
| | return dataset |
| |
|
| | def split_limited_load(self, split_name): |
| | yield from itertools.islice(self._cache[split_name], self.get_limit()) |
| |
|
| | def limited_load(self): |
| | self.log_limited_loading() |
| | return MultiStream( |
| | { |
| | name: Stream( |
| | generator=self.split_limited_load, gen_kwargs={"split_name": name} |
| | ) |
| | for name in self._cache.keys() |
| | } |
| | ) |
| |
|
| | def process(self): |
| | try: |
| | dataset = self.stream_dataset() |
| | except ( |
| | NotImplementedError |
| | ): |
| | dataset = self.load_dataset() |
| |
|
| | if self.get_limit() is not None: |
| | return self.limited_load() |
| |
|
| | return MultiStream.from_iterables(dataset) |
| |
|
| |
|
| | class LoadCSV(Loader): |
| | files: Dict[str, str] |
| | chunksize: int = 1000 |
| | _cache = InternalField(default_factory=dict) |
| | loader_limit: int = None |
| | streaming: bool = True |
| |
|
| | def stream_csv(self, file): |
| | if self.get_limit() is not None: |
| | self.log_limited_loading() |
| | chunksize = min(self.get_limit(), self.chunksize) |
| | else: |
| | chunksize = self.chunksize |
| |
|
| | row_count = 0 |
| | for chunk in pd.read_csv(file, chunksize=chunksize): |
| | for _, row in chunk.iterrows(): |
| | if self.get_limit() is not None and row_count >= self.get_limit(): |
| | return |
| | yield row.to_dict() |
| | row_count += 1 |
| |
|
| | def load_csv(self, file): |
| | if file not in self._cache: |
| | if self.get_limit() is not None: |
| | self.log_limited_loading() |
| | self._cache[file] = pd.read_csv(file, nrows=self.get_limit()).to_dict( |
| | "records" |
| | ) |
| | else: |
| | self._cache[file] = pd.read_csv(file).to_dict("records") |
| |
|
| | yield from self._cache[file] |
| |
|
| | def process(self): |
| | if self.streaming: |
| | return MultiStream( |
| | { |
| | name: Stream(generator=self.stream_csv, gen_kwargs={"file": file}) |
| | for name, file in self.files.items() |
| | } |
| | ) |
| |
|
| | return MultiStream( |
| | { |
| | name: Stream(generator=self.load_csv, gen_kwargs={"file": file}) |
| | for name, file in self.files.items() |
| | } |
| | ) |
| |
|
| |
|
| | class MissingKaggleCredentialsError(ValueError): |
| | pass |
| |
|
| |
|
| | |
| | class LoadFromKaggle(Loader): |
| | url: str |
| |
|
| | def verify(self): |
| | super().verify() |
| | if importlib.util.find_spec("opendatasets") is None: |
| | raise ImportError( |
| | "Please install opendatasets in order to use the LoadFromKaggle loader (using `pip install opendatasets`) " |
| | ) |
| | if not os.path.isfile("kaggle.json"): |
| | raise MissingKaggleCredentialsError( |
| | "Please obtain kaggle credentials https://christianjmills.com/posts/kaggle-obtain-api-key-tutorial/ and save them to local ./kaggle.json file" |
| | ) |
| |
|
| | if self.streaming: |
| | raise NotImplementedError("LoadFromKaggle cannot load with streaming.") |
| |
|
| | def prepare(self): |
| | super().prepare() |
| | from opendatasets import download |
| |
|
| | self.downloader = download |
| |
|
| | def process(self): |
| | with TemporaryDirectory() as temp_directory: |
| | self.downloader(self.url, temp_directory) |
| | dataset = hf_load_dataset(temp_directory, streaming=False) |
| |
|
| | return MultiStream.from_iterables(dataset) |
| |
|
| |
|
| | class LoadFromIBMCloud(Loader): |
| | endpoint_url_env: str |
| | aws_access_key_id_env: str |
| | aws_secret_access_key_env: str |
| | bucket_name: str |
| | data_dir: str = None |
| |
|
| | |
| | |
| | |
| | |
| | data_files: Union[Sequence[str], Mapping[str, Union[str, Sequence[str]]]] |
| | caching: bool = True |
| |
|
| | def _download_from_cos(self, cos, bucket_name, item_name, local_file): |
| | logger.info(f"Downloading {item_name} from {bucket_name} COS") |
| | try: |
| | response = cos.Object(bucket_name, item_name).get() |
| | size = response["ContentLength"] |
| | body = response["Body"] |
| | except Exception as e: |
| | raise Exception( |
| | f"Unabled to access {item_name} in {bucket_name} in COS", e |
| | ) from e |
| |
|
| | if self.get_limit() is not None: |
| | if item_name.endswith(".jsonl"): |
| | first_lines = list( |
| | itertools.islice(body.iter_lines(), self.get_limit()) |
| | ) |
| | with open(local_file, "wb") as downloaded_file: |
| | for line in first_lines: |
| | downloaded_file.write(line) |
| | downloaded_file.write(b"\n") |
| | logger.info( |
| | f"\nDownload successful limited to {self.get_limit()} lines" |
| | ) |
| | return |
| |
|
| | progress_bar = tqdm(total=size, unit="iB", unit_scale=True) |
| |
|
| | def upload_progress(chunk): |
| | progress_bar.update(chunk) |
| |
|
| | try: |
| | cos.Bucket(bucket_name).download_file( |
| | item_name, local_file, Callback=upload_progress |
| | ) |
| | logger.info("\nDownload Successful") |
| | except Exception as e: |
| | raise Exception( |
| | f"Unabled to download {item_name} in {bucket_name}", e |
| | ) from e |
| |
|
| | def prepare(self): |
| | super().prepare() |
| | self.endpoint_url = os.getenv(self.endpoint_url_env) |
| | self.aws_access_key_id = os.getenv(self.aws_access_key_id_env) |
| | self.aws_secret_access_key = os.getenv(self.aws_secret_access_key_env) |
| | root_dir = os.getenv("UNITXT_IBM_COS_CACHE", None) or os.getcwd() |
| | self.cache_dir = os.path.join(root_dir, "ibmcos_datasets") |
| |
|
| | if not os.path.exists(self.cache_dir): |
| | Path(self.cache_dir).mkdir(parents=True, exist_ok=True) |
| |
|
| | def verify(self): |
| | super().verify() |
| | assert ibm_boto3_available, "Please install ibm_boto3 in order to use the LoadFromIBMCloud loader (using `pip install ibm-cos-sdk`) " |
| | assert ( |
| | self.endpoint_url is not None |
| | ), f"Please set the {self.endpoint_url_env} environmental variable" |
| | assert ( |
| | self.aws_access_key_id is not None |
| | ), f"Please set {self.aws_access_key_id_env} environmental variable" |
| | assert ( |
| | self.aws_secret_access_key is not None |
| | ), f"Please set {self.aws_secret_access_key_env} environmental variable" |
| | if self.streaming: |
| | raise NotImplementedError("LoadFromKaggle cannot load with streaming.") |
| |
|
| | def process(self): |
| | cos = ibm_boto3.resource( |
| | "s3", |
| | aws_access_key_id=self.aws_access_key_id, |
| | aws_secret_access_key=self.aws_secret_access_key, |
| | endpoint_url=self.endpoint_url, |
| | ) |
| | local_dir = os.path.join( |
| | self.cache_dir, |
| | self.bucket_name, |
| | self.data_dir, |
| | f"loader_limit_{self.get_limit()}", |
| | ) |
| | if not os.path.exists(local_dir): |
| | Path(local_dir).mkdir(parents=True, exist_ok=True) |
| | if isinstance(self.data_files, Mapping): |
| | data_files_names = list(self.data_files.values()) |
| | if not isinstance(data_files_names[0], str): |
| | data_files_names = list(itertools.chain(*data_files_names)) |
| | else: |
| | data_files_names = self.data_files |
| |
|
| | for data_file in data_files_names: |
| | local_file = os.path.join(local_dir, data_file) |
| | if not self.caching or not os.path.exists(local_file): |
| | |
| | |
| | object_key = ( |
| | self.data_dir + "/" + data_file |
| | if self.data_dir is not None |
| | else data_file |
| | ) |
| | with tempfile.NamedTemporaryFile() as temp_file: |
| | |
| | self._download_from_cos( |
| | cos, |
| | self.bucket_name, |
| | object_key, |
| | local_dir + "/" + os.path.basename(temp_file.name), |
| | ) |
| | os.rename( |
| | local_dir + "/" + os.path.basename(temp_file.name), |
| | local_dir + "/" + data_file, |
| | ) |
| |
|
| | if isinstance(self.data_files, list): |
| | dataset = hf_load_dataset(local_dir, streaming=False) |
| | else: |
| | dataset = hf_load_dataset( |
| | local_dir, streaming=False, data_files=self.data_files |
| | ) |
| |
|
| | return MultiStream.from_iterables(dataset) |
| |
|