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hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/longt5/configuration_longt5.py | # coding=utf-8
# Copyright 2022, The LongT5 Authors and HuggingFace Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" LongT5 model configuration"""
from typing import Mapping
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxSeq2SeqConfigWithPast
from ...utils import logging
logger = logging.get_logger(__name__)
LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/long-t5-local-base": "https://huggingface.co/google/long-t5-local-base/blob/main/config.json",
"google/long-t5-local-large": "https://huggingface.co/google/long-t5-local-large/blob/main/config.json",
"google/long-t5-tglobal-base": "https://huggingface.co/google/long-t5-tglobal-base/blob/main/config.json",
"google/long-t5-tglobal-large": "https://huggingface.co/google/long-t5-tglobal-large/blob/main/config.json",
}
class LongT5Config(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`LongT5Model`] or a [`FlaxLongT5Model`]. It is
used to instantiate a LongT5 model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the LongT5
[google/long-t5-local-base](https://huggingface.co/google/long-t5-local-base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Arguments:
vocab_size (`int`, *optional*, defaults to 32128):
Vocabulary size of the LongT5 model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`LongT5Model`].
d_model (`int`, *optional*, defaults to 512):
Size of the encoder layers and the pooler layer.
d_kv (`int`, *optional*, defaults to 64):
Size of the key, query, value projections per attention head. `d_kv` has to be equal to `d_model //
num_heads`.
d_ff (`int`, *optional*, defaults to 2048):
Size of the intermediate feed forward layer in each `LongT5Block`.
num_layers (`int`, *optional*, defaults to 6):
Number of hidden layers in the Transformer encoder.
num_decoder_layers (`int`, *optional*):
Number of hidden layers in the Transformer decoder. Will use the same value as `num_layers` if not set.
num_heads (`int`, *optional*, defaults to 8):
Number of attention heads for each attention layer in the Transformer encoder.
local_radius (`int`, *optional*, defaults to 127)
Number of tokens to the left/right for each token to locally self-attend in a local attention mechanism.
global_block_size (`int`, *optional*, defaults to 16)
Lenght of blocks an input sequence is divided into for a global token representation. Used only for
`encoder_attention_type = "transient-global"`.
relative_attention_num_buckets (`int`, *optional*, defaults to 32):
The number of buckets to use for each attention layer.
relative_attention_max_distance (`int`, *optional*, defaults to 128):
The maximum distance of the longer sequences for the bucket separation.
dropout_rate (`float`, *optional*, defaults to 0.1):
The ratio for all dropout layers.
layer_norm_eps (`float`, *optional*, defaults to 1e-6):
The epsilon used by the layer normalization layers.
initializer_factor (`float`, *optional*, defaults to 1):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
feed_forward_proj (`string`, *optional*, defaults to `"relu"`):
Type of feed forward layer to be used. Should be one of `"relu"` or `"gated-gelu"`. LongT5v1.1 uses the
`"gated-gelu"` feed forward projection. Original LongT5 implementation uses `"gated-gelu"`.
encoder_attention_type (`string`, *optional*, defaults to `"local"`):
Type of encoder attention to be used. Should be one of `"local"` or `"transient-global"`, which are
supported by LongT5 implementation.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
"""
model_type = "longt5"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {"hidden_size": "d_model", "num_attention_heads": "num_heads", "num_hidden_layers": "num_layers"}
def __init__(
self,
vocab_size=32128,
d_model=512,
d_kv=64,
d_ff=2048,
num_layers=6,
num_decoder_layers=None,
num_heads=8,
local_radius=127,
global_block_size=16,
relative_attention_num_buckets=32,
relative_attention_max_distance=128,
dropout_rate=0.1,
layer_norm_epsilon=1e-6,
initializer_factor=1.0,
feed_forward_proj="relu",
is_encoder_decoder=True,
encoder_attention_type="local",
use_cache=True,
pad_token_id=0,
eos_token_id=1,
**kwargs,
):
self.vocab_size = vocab_size
self.d_model = d_model
self.d_kv = d_kv
self.d_ff = d_ff
self.num_layers = num_layers
# default = symmetry
self.num_decoder_layers = num_decoder_layers if num_decoder_layers is not None else self.num_layers
self.num_heads = num_heads
self.local_radius = local_radius
self.global_block_size = global_block_size
self.relative_attention_num_buckets = relative_attention_num_buckets
self.relative_attention_max_distance = relative_attention_max_distance
self.dropout_rate = dropout_rate
self.layer_norm_epsilon = layer_norm_epsilon
self.initializer_factor = initializer_factor
self.feed_forward_proj = feed_forward_proj
self.encoder_attention_type = encoder_attention_type
self.use_cache = use_cache
act_info = self.feed_forward_proj.split("-")
self.dense_act_fn = act_info[-1]
self.is_gated_act = act_info[0] == "gated"
if len(act_info) > 1 and act_info[0] != "gated" or len(act_info) > 2:
raise ValueError(
f"`feed_forward_proj`: {feed_forward_proj} is not a valid activation function of the dense layer. "
"Please make sure `feed_forward_proj` is of the format `gated-{ACT_FN}` or `{ACT_FN}`, e.g. "
"'gated-gelu' or 'relu'"
)
# for backwards compatibility
if feed_forward_proj == "gated-gelu":
self.dense_act_fn = "gelu_new"
super().__init__(
pad_token_id=pad_token_id,
eos_token_id=eos_token_id,
is_encoder_decoder=is_encoder_decoder,
**kwargs,
)
class LongT5OnnxConfig(OnnxSeq2SeqConfigWithPast):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
common_inputs = {
"input_ids": {0: "batch", 1: "encoder_sequence"},
"attention_mask": {0: "batch", 1: "encoder_sequence"},
}
if self.use_past:
common_inputs["attention_mask"][1] = "past_encoder_sequence + sequence"
common_inputs["decoder_input_ids"] = {0: "batch"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "past_decoder_sequence + sequence"}
else:
common_inputs["decoder_input_ids"] = {0: "batch", 1: "decoder_sequence"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "decoder_sequence"}
if self.use_past:
self.fill_with_past_key_values_(common_inputs, direction="inputs")
return common_inputs
@property
def default_onnx_opset(self) -> int:
return 13
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/longt5/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_flax_available, is_torch_available
_import_structure = {
"configuration_longt5": ["LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP", "LongT5Config", "LongT5OnnxConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_longt5"] = [
"LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST",
"LongT5EncoderModel",
"LongT5ForConditionalGeneration",
"LongT5Model",
"LongT5PreTrainedModel",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_longt5"] = [
"FlaxLongT5ForConditionalGeneration",
"FlaxLongT5Model",
"FlaxLongT5PreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_longt5 import LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP, LongT5Config, LongT5OnnxConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_longt5 import (
LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST,
LongT5EncoderModel,
LongT5ForConditionalGeneration,
LongT5Model,
LongT5PreTrainedModel,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_longt5 import (
FlaxLongT5ForConditionalGeneration,
FlaxLongT5Model,
FlaxLongT5PreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/longt5/modeling_longt5.py | # coding=utf-8
# Copyright 2022 Google LLC., LongT5 Authors and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch LongT5 model."""
import copy
import math
import warnings
from typing import Any, List, Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import ALL_LAYERNORM_LAYERS, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
DUMMY_INPUTS,
DUMMY_MASK,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_torch_fx_proxy,
logging,
replace_return_docstrings,
)
from .configuration_longt5 import LongT5Config
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "LongT5Config"
_CHECKPOINT_FOR_DOC = "google/long-t5-local-base"
# TODO: Update before the merge
LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/long-t5-local-base",
"google/long-t5-local-large",
"google/long-t5-tglobal-base",
"google/long-t5-tglobal-large",
]
def _pad_to_multiple(x: torch.Tensor, block_len: int, dim: int, pad_value: int = 0) -> torch.Tensor:
"""Pad a tensor so that a sequence length will be a multiple of `block_len`"""
pad_len = -x.shape[dim] % block_len
# Handle cases when an empty input sequence is given
if not all(x.shape):
new_shape = list(x.shape)
new_shape[dim] += pad_len
return torch.zeros(new_shape, dtype=x.dtype)
pad = [(0, 0)] * x.ndim
pad[dim] = (0, pad_len)
pad = sum(pad[::-1], ())
x = nn.functional.pad(x, pad=pad, mode="constant", value=pad_value)
return x
def _split_into_blocks(x: torch.Tensor, block_len: int, dim: int) -> torch.Tensor:
"""Split an input tensor into blocks of a given `block_len` along the given `dim`. If the dimension length
is not a multiple of `block_len`, it will be padded first with selected `pad_value`.
"""
# pad tensor to multiple of block_len
if x.shape[dim] % block_len != 0:
x = _pad_to_multiple(x, block_len, dim, pad_value=0)
num_blocks = x.shape[dim] // block_len
output_shape = x.shape[:dim] + (num_blocks, block_len) + x.shape[(dim + 1) :]
# If 0 is in output_shape, we cannot apply reshape because of incompatibility with ONNX conversion
if 0 in output_shape:
return torch.empty(output_shape, dtype=x.dtype, device=x.device)
return x.reshape(output_shape)
def _concatenate_3_blocks(x: torch.Tensor, block_dim: int, sequence_dim: int, pad_value: int = 0) -> torch.Tensor:
"""Concatenate three consecutive blocks for each input block for local attentiont.
For more information, see: https://arxiv.org/pdf/2112.07916.pdf.
"""
num_blocks = x.shape[block_dim]
pad = [(0, 0)] * x.ndim
pad[block_dim] = (1, 1)
pad = sum(pad[::-1], ())
# [batch_size, num_blocks, block_len] -> [batch_size, num_blocks + 2, block_len]
x = nn.functional.pad(x, pad=pad, mode="constant", value=pad_value)
blocks_list: List[torch.Tensor] = []
for i in range(3):
# We use indexing approach here:
# https://numpy.org/doc/stable/user/basics.indexing.html#dealing-with-variable-numbers-of-indices-within-programs
indices = [slice(0, None)] * x.ndim
indices[block_dim] = slice(i, i + num_blocks)
indices = tuple(indices)
blocks_list.append(x[indices])
# [batch_size, num_blocks, 3 * block_len, ...]
return torch.cat(blocks_list, dim=sequence_dim)
def _make_3block_relative_position_ids(block_len: int) -> torch.Tensor:
"""Makes 3-blocked relative position ids for local attention."""
position_ids = torch.arange(3 * block_len, dtype=torch.int32)
center_position_ids = position_ids[block_len:-block_len]
# [block_len, 3 * block_len]
relative_position_ids = position_ids.unsqueeze(0) - center_position_ids.unsqueeze(1)
return relative_position_ids
def _mask_local_attention_mask(local_attention_mask: torch.Tensor, block_len: int) -> torch.Tensor:
"""Mask local attention mask to enforce that tokens are not allowed to attend tokens farther than ``local_radius."""
relative_position_ids = _make_3block_relative_position_ids(block_len)
locality_mask = torch.abs(relative_position_ids) < block_len
locality_mask = locality_mask[None, None, :, :]
locality_mask = locality_mask.to(local_attention_mask.device)
return torch.logical_and(local_attention_mask, locality_mask)
def _get_local_attention_mask(attention_mask: torch.Tensor, block_len: int, device: torch.device) -> torch.Tensor:
"""Prepare attention mask to be applied for a local attention."""
# [batch_size, num_blocks, block_len]
_blocked_attention_mask = _split_into_blocks(attention_mask, block_len, dim=1)
# [batch_size, num_block, 3 * block_len]
_3blocked_attention_mask = _concatenate_3_blocks(_blocked_attention_mask, block_dim=1, sequence_dim=2)
_blocked_attention_mask = _blocked_attention_mask.unsqueeze(-1)
_3blocked_attention_mask = _3blocked_attention_mask.unsqueeze(-2)
# [batch_size, num_block, block_len, 3 * block_len]
local_attention_mask = torch.logical_and(_blocked_attention_mask, _3blocked_attention_mask)
local_attention_mask = _mask_local_attention_mask(local_attention_mask, block_len)
# [batch_size, 1, num_block, block_len, 3 * block_len]
return local_attention_mask.unsqueeze(1).to(device)
def _make_global_fixed_block_ids(
attention_mask: torch.Tensor, global_block_size: int
) -> Tuple[torch.Tensor, torch.Tensor]:
"""Obtain the "fixed block" global id corresponding to each input token.
This implementation is a simlified version of the original Flaxformr implementation adopted from:
https://github.com/google/flaxformer/blob/main/flaxformer/architectures/longt5/long_attention.py.
In our scenario, as we use this strategy only for a decoder, orphan tokens, i.e. those tokens which do not make for
the whole fixed block, are assigned to the preceding block.
Padding tokens from the original sequence are represented by -1.
"""
batch_size, seq_len = attention_mask.shape[:2]
def handle_orphan_tokens(block_ids: torch.Tensor) -> torch.Tensor:
block_ends = (torch.arange(seq_len) % global_block_size) == global_block_size - 1
block_ends = block_ends.to(block_ids.device)
true_block_ends = torch.logical_and(block_ends, block_ids >= 0)
full_blocks = true_block_ends.sum(-1).unsqueeze(-1).type(block_ids.dtype) - 1
block_ids = torch.where(block_ids < full_blocks, block_ids, full_blocks)
return block_ids
fixed_block_mask = torch.ones_like(attention_mask, device=attention_mask.device) / global_block_size
fixed_block_mask = torch.cumsum(fixed_block_mask, axis=1) - fixed_block_mask
mask = torch.where(attention_mask != 0.0, 1.0, -1000.0).type(attention_mask.dtype)
global_block_ids = torch.floor(mask + fixed_block_mask - 1.0).type(attention_mask.dtype)
_global_block_ids_lower_bound = torch.tensor(-1, dtype=global_block_ids.dtype, device=global_block_ids.device)
global_block_ids = torch.where(
global_block_ids > _global_block_ids_lower_bound, global_block_ids, _global_block_ids_lower_bound
)
# set padding tokens to -1
global_block_ids = (global_block_ids * attention_mask) + (attention_mask - 1)
# [batch_size, seq_len]
global_block_ids = handle_orphan_tokens(global_block_ids)
num_globals = seq_len // global_block_size
# [batch_size, seq_len // global_block_size]
if num_globals > 0:
_sequence_block_ids_max = torch.max(global_block_ids, dim=-1).values.repeat(num_globals, 1).transpose(0, 1)
else:
_sequence_block_ids_max = torch.zeros(
batch_size, 0, dtype=global_block_ids.dtype, device=global_block_ids.device
)
global_segment_ids = torch.cumsum(torch.ones(batch_size, num_globals), dim=-1) - 1
global_segment_ids = global_segment_ids.to(attention_mask.device)
global_segment_ids = torch.where(global_segment_ids <= _sequence_block_ids_max, 1, 0)
return global_block_ids.type(torch.int), global_segment_ids.type(torch.int)
def _make_side_relative_position_ids(attention_mask: torch.Tensor, global_block_size: int) -> torch.Tensor:
"""Create the relative position tensor for local -> global attention."""
block_ids, global_segment_ids = _make_global_fixed_block_ids(attention_mask, global_block_size)
global_seq_len = global_segment_ids.shape[-1]
global_positions = torch.arange(global_seq_len, device=block_ids.device)
side_relative_position = global_positions - block_ids[..., None]
return side_relative_position.type(torch.int64)
def _create_global_aggregates(
hidden_states: torch.Tensor, block_ids: torch.Tensor, global_seq_len: int
) -> torch.Tensor:
"""Compute individual block aggregates by summing over individual blocks."""
# (batch..., seq_len, global_seq_len))
block_ids = block_ids.where(
block_ids >= 0, torch.tensor(global_seq_len, dtype=block_ids.dtype, device=block_ids.device)
)
one_hot_block_ids = nn.functional.one_hot(block_ids.type(torch.int64), global_seq_len + 1)[:, :, :-1]
return torch.einsum("...nd,...ng->...gd", hidden_states, one_hot_block_ids.type(hidden_states.dtype))
# Copied from transformers.models.t5.modeling_t5.T5LayerNorm with T5->LongT5
class LongT5LayerNorm(nn.Module):
def __init__(self, hidden_size, eps=1e-6):
"""
Construct a layernorm module in the LongT5 style. No bias and no subtraction of mean.
"""
super().__init__()
self.weight = nn.Parameter(torch.ones(hidden_size))
self.variance_epsilon = eps
def forward(self, hidden_states):
# LongT5 uses a layer_norm which only scales and doesn't shift, which is also known as Root Mean
# Square Layer Normalization https://arxiv.org/abs/1910.07467 thus varience is calculated
# w/o mean and there is no bias. Additionally we want to make sure that the accumulation for
# half-precision inputs is done in fp32
variance = hidden_states.to(torch.float32).pow(2).mean(-1, keepdim=True)
hidden_states = hidden_states * torch.rsqrt(variance + self.variance_epsilon)
# convert into half-precision if necessary
if self.weight.dtype in [torch.float16, torch.bfloat16]:
hidden_states = hidden_states.to(self.weight.dtype)
return self.weight * hidden_states
try:
from apex.normalization import FusedRMSNorm
LongT5LayerNorm = FusedRMSNorm # noqa
logger.info("Discovered apex.normalization.FusedRMSNorm - will use it instead of LongT5LayerNorm")
except ImportError:
# using the normal LongT5LayerNorm
pass
except Exception:
logger.warning("discovered apex but it failed to load, falling back to LongT5LayerNorm")
pass
ALL_LAYERNORM_LAYERS.append(LongT5LayerNorm)
# Copied from transformers.models.t5.modeling_t5.T5DenseActDense with T5->LongT5
class LongT5DenseActDense(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
self.wi = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_states = self.wi(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.dropout(hidden_states)
if (
isinstance(self.wo.weight, torch.Tensor)
and hidden_states.dtype != self.wo.weight.dtype
and self.wo.weight.dtype != torch.int8
):
hidden_states = hidden_states.to(self.wo.weight.dtype)
hidden_states = self.wo(hidden_states)
return hidden_states
class LongT5DenseGatedActDense(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
self.wi_0 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wi_1 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_gelu = self.act(self.wi_0(hidden_states))
hidden_linear = self.wi_1(hidden_states)
hidden_states = hidden_gelu * hidden_linear
hidden_states = self.dropout(hidden_states)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5LayerFF with T5->LongT5
class LongT5LayerFF(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
if config.is_gated_act:
self.DenseReluDense = LongT5DenseGatedActDense(config)
else:
self.DenseReluDense = LongT5DenseActDense(config)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(self, hidden_states):
forwarded_states = self.layer_norm(hidden_states)
forwarded_states = self.DenseReluDense(forwarded_states)
hidden_states = hidden_states + self.dropout(forwarded_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5Attention with T5->LongT5
class LongT5Attention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias=False):
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
self.gradient_checkpointing = False
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, query_length, key_length, device=None):
"""Compute binned relative position bias"""
if device is None:
device = self.relative_attention_bias.weight.device
context_position = torch.arange(query_length, dtype=torch.long, device=device)[:, None]
memory_position = torch.arange(key_length, dtype=torch.long, device=device)[None, :]
relative_position = memory_position - context_position # shape (query_length, key_length)
relative_position_bucket = self._relative_position_bucket(
relative_position, # shape (query_length, key_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket) # shape (query_length, key_length, num_heads)
values = values.permute([2, 0, 1]).unsqueeze(0) # shape (1, num_heads, query_length, key_length)
return values
def forward(
self,
hidden_states,
mask=None,
key_value_states=None,
position_bias=None,
past_key_value=None,
layer_head_mask=None,
query_length=None,
use_cache=False,
output_attentions=False,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
# Input is (batch_size, seq_length, dim)
# Mask is (batch_size, key_length) (non-causal) or (batch_size, key_length, key_length)
# past_key_value[0] is (batch_size, n_heads, q_len - 1, dim_per_head)
batch_size, seq_length = hidden_states.shape[:2]
real_seq_length = seq_length
if past_key_value is not None:
if len(past_key_value) != 2:
raise ValueError(
f"past_key_value should have 2 past states: keys and values. Got { len(past_key_value)} past states"
)
real_seq_length += past_key_value[0].shape[2] if query_length is None else query_length
key_length = real_seq_length if key_value_states is None else key_value_states.shape[1]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim).transpose(1, 2)
def unshape(states):
"""reshape"""
return states.transpose(1, 2).contiguous().view(batch_size, -1, self.inner_dim)
def project(hidden_states, proj_layer, key_value_states, past_key_value):
"""projects hidden states correctly to key/query states"""
if key_value_states is None:
# self-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(hidden_states))
elif past_key_value is None:
# cross-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(key_value_states))
if past_key_value is not None:
if key_value_states is None:
# self-attn
# (batch_size, n_heads, key_length, dim_per_head)
hidden_states = torch.cat([past_key_value, hidden_states], dim=2)
elif past_key_value.shape[2] != key_value_states.shape[1]:
# checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
# cross-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(key_value_states))
else:
# cross-attn
hidden_states = past_key_value
return hidden_states
# get query states
query_states = shape(self.q(hidden_states)) # (batch_size, n_heads, seq_length, dim_per_head)
# get key/value states
key_states = project(
hidden_states, self.k, key_value_states, past_key_value[0] if past_key_value is not None else None
)
value_states = project(
hidden_states, self.v, key_value_states, past_key_value[1] if past_key_value is not None else None
)
# compute scores
scores = torch.matmul(
query_states, key_states.transpose(3, 2)
) # equivalent of torch.einsum("bnqd,bnkd->bnqk", query_states, key_states), compatible with onnx op>9
if position_bias is None:
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, self.n_heads, real_seq_length, key_length), device=scores.device, dtype=scores.dtype
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(real_seq_length, key_length, device=scores.device)
# if key and values are already calculated
# we want only the last query position bias
if past_key_value is not None:
position_bias = position_bias[:, :, -hidden_states.size(1) :, :]
if mask is not None:
position_bias = position_bias + mask # (batch_size, n_heads, seq_length, key_length)
if self.pruned_heads:
mask = torch.ones(position_bias.shape[1])
mask[list(self.pruned_heads)] = 0
position_bias_masked = position_bias[:, mask.bool()]
else:
position_bias_masked = position_bias
scores += position_bias_masked
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(
scores
) # (batch_size, n_heads, seq_length, key_length)
attn_weights = nn.functional.dropout(
attn_weights, p=self.dropout, training=self.training
) # (batch_size, n_heads, seq_length, key_length)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_output = unshape(torch.matmul(attn_weights, value_states)) # (batch_size, seq_length, dim)
attn_output = self.o(attn_output)
present_key_value_state = (key_states, value_states) if (self.is_decoder and use_cache) else None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class LongT5LocalAttention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias: bool = False) -> None:
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
self.gradient_checkpointing = False
# Copied from transformers.models.t5.modeling_t5.T5Attention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
# Copied from transformers.models.t5.modeling_t5.T5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
target_device = (
self.relative_attention_bias.weight.device
if self.relative_attention_bias.weight.device.type != "meta"
else None
)
memory_position = torch.arange(3 * block_length, dtype=torch.long, device=target_device)
context_position = memory_position[block_length:-block_length]
# (block_length, 3 * block_length)
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position, # (block_length, 3 * block_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (block_length, 3 * block_length, num_heads)
values = self.relative_attention_bias(relative_position_bucket)
# (1, 1, num_heads, block_length, 3 * block_length)
values = values.permute([2, 0, 1]).unsqueeze(0).unsqueeze(0)
return values
def forward(
self,
hidden_states,
mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
):
batch_size, seq_length = hidden_states.shape[:2]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim)
def unshape(states):
"""reshape"""
return states.contiguous().view(batch_size, -1, self.inner_dim)
# get query/key/value states -> (batch_size, seq_length, n_heads, dim_per_head)
query_states = shape(self.q(hidden_states))
key_states = shape(self.k(hidden_states))
value_states = shape(self.v(hidden_states))
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, dim_per_head)
query_states = _split_into_blocks(query_states, self.block_len, dim=1)
key_states = _split_into_blocks(key_states, self.block_len, dim=1)
value_states = _split_into_blocks(value_states, self.block_len, dim=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_dim=1, sequence_dim=2)
value_states = _concatenate_3_blocks(value_states, block_dim=1, sequence_dim=2)
# Compute scores
scores = torch.einsum(
"...qhd,...khd->...hqk", query_states, key_states
) # (batch_size, num_block, n_heads, block_len, 3 * block_len)
if position_bias is None:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, 1, self.n_heads, self.block_len, 3 * self.block_len), device=scores.device, dtype=scores.dtype
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(self.block_len)
if mask is not None:
# Replace masked positions with -1e10 (according to the original implementation)
mask = torch.where(mask > 0, 0.0, -1e10)
# We need to adjust position bias shape to be sum with mask
position_bias = position_bias + mask.transpose(1, 2)
scores += position_bias
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len)
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(scores)
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len)
attn_weights = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_weights = attn_weights.type(value_states.dtype)
attn_output = unshape(torch.einsum("...hqk,...khd->...qhd", attn_weights, value_states))
attn_output = attn_output[:, :seq_length, :]
attn_output = self.o(attn_output)
present_key_value_state = None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class LongT5TransientGlobalAttention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias: bool = False) -> None:
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.global_block_size = config.global_block_size
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
# Relativen attention bias & Layer norm for global attention
if self.has_relative_attention_bias:
self.global_relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.global_input_layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
# Copied from transformers.models.t5.modeling_t5.T5Attention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
# Copied from transformers.models.t5.modeling_t5.T5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
target_device = (
self.relative_attention_bias.weight.device
if self.relative_attention_bias.weight.device.type != "meta"
else None
)
memory_position = torch.arange(3 * block_length, dtype=torch.long, device=target_device)
context_position = memory_position[block_length:-block_length]
# (block_length, 3 * block_length)
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position, # (block_length, 3 * block_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (block_length, 3 * block_length, num_heads)
values = self.relative_attention_bias(relative_position_bucket)
# (1, 1, num_heads, block_length, 3 * block_length)
values = values.permute([2, 0, 1]).unsqueeze(0).unsqueeze(0)
return values
def compute_side_bias(self, mask: torch.Tensor, global_segment_ids: torch.Tensor) -> torch.Tensor:
# (batch_size, 1, seq_len, global_seq_len)
side_attention_mask = torch.eq(mask[..., None], global_segment_ids[:, None, :])[:, None, ...]
attention_side_bias = torch.where(side_attention_mask > 0, 0.0, -1e10)
# (batch_size, seq_len, global_seq_len)
side_relative_position = _make_side_relative_position_ids(mask, self.global_block_size)
side_relative_position_bucket = self._relative_position_bucket(
side_relative_position,
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (batch_size, seq_len, global_seq_len, num_heads)
side_bias = self.global_relative_attention_bias(side_relative_position_bucket)
# (batch_size, num_heads, seq_len, global_seq_len)
side_bias = side_bias.permute([0, 3, 1, 2])
# (batch_size, num_heads, seq_len, global_seq_len)
attention_side_bias = attention_side_bias + side_bias
return attention_side_bias
def forward(
self,
hidden_states,
mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
):
batch_size, seq_length = hidden_states.shape[:2]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim)
def unshape(states):
"""reshape"""
return states.contiguous().view(batch_size, -1, self.inner_dim)
# Prepare components for transient-global attention
# Obtain block_ids and global_segment_ids
# global_seq_len := seq_len // self.global_block_size
# shapes: (batch_size, seq_len) & (batch_size, global_seq_len)
block_ids, global_segment_ids = _make_global_fixed_block_ids(
mask if mask is not None else torch.ones(hidden_states.shape[:-1]),
self.global_block_size,
)
# Create global inputs
_global_seq_len = global_segment_ids.shape[-1]
global_inputs = _create_global_aggregates(hidden_states, block_ids, _global_seq_len)
global_inputs = self.global_input_layer_norm(global_inputs)
# get query states -> (batch_size, seq_length, n_heads, dim_per_head)
query_states = shape(self.q(hidden_states))
key_states = shape(self.k(hidden_states))
value_states = shape(self.v(hidden_states))
# Get global/side key/value states shape: (batch_size, global_seq_len, n_heads, dim_per_head)
side_key_states = shape(self.k(global_inputs))
side_value_states = shape(self.v(global_inputs))
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, dim_per_head)
query_states = _split_into_blocks(query_states, self.block_len, dim=1)
key_states = _split_into_blocks(key_states, self.block_len, dim=1)
value_states = _split_into_blocks(value_states, self.block_len, dim=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_dim=1, sequence_dim=2)
value_states = _concatenate_3_blocks(value_states, block_dim=1, sequence_dim=2)
# Tile side inputs across local key/value blocks
# New shape: (batch_size, num_blocks, global_seq_len, n_heads, dim_per_head)
reps = [1] * (side_key_states.ndim + 1)
reps[1] = key_states.shape[1]
side_key_states = side_key_states.unsqueeze(1).repeat(reps)
side_value_states = side_value_states.unsqueeze(1).repeat(reps)
# Concatenate "local" and "side"/"global" key/value states to allow each token to attend global aggregated ones
# New shape: (batch_size, num_blocks, 3 * block_len + global_seq_len, n_heads, dim_per_head)
key_states = torch.cat([key_states, side_key_states], dim=2)
value_states = torch.cat([value_states, side_value_states], dim=2)
# Compute scores -> (batch_size, num_block, n_heads, block_len, 3 * block_len + global_seq_len)
scores = torch.einsum("...qhd,...khd->...hqk", query_states, key_states)
if mask is not None:
# We need to adjust position bias shape to be sum with mask
local_attention_mask = _get_local_attention_mask(mask, self.block_len, hidden_states.device)
# Replace masked positions with -10_000 (according to the original implementation)
local_attention_mask = torch.where(local_attention_mask > 0, 0.0, -1e10)
else:
local_attention_mask = None
if position_bias is None:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, 1, self.n_heads, self.block_len, 3 * self.block_len),
device=scores.device,
dtype=scores.dtype,
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(self.block_len)
if local_attention_mask is not None:
# (batch_size, 1, n_heads, block_len, 3 * block_len)
position_bias = position_bias + local_attention_mask.transpose(1, 2)
position_bias = position_bias.type(scores.dtype)
# Calculate global/side bias - shape: # (batch_size, num_heads, seq_len, global_seq_len)
if mask is None:
mask = torch.ones(batch_size, seq_length)
# (batch_size, num_heads, seq_len, global_seq_len)
side_position_bias = self.compute_side_bias(mask, global_segment_ids)
# (batch_size, num_blocks, num_heads, block_len, global_seq_len)
side_position_bias = _split_into_blocks(side_position_bias, self.block_len, dim=-2).transpose(1, 2)
side_position_bias = side_position_bias.type(scores.dtype).to(scores.device)
# (batch_size, num_blocks, num_heads, block_len, 3 * block_len + global_seq_len)
position_bias = torch.cat([position_bias, side_position_bias], dim=-1)
scores += position_bias
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len + global_seq_len)
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(scores)
attn_weights = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_weights = attn_weights.type(value_states.dtype)
attn_output = unshape(torch.einsum("...hqk,...khd->...qhd", attn_weights, value_states))
attn_output = attn_output[:, :seq_length, :]
attn_output = self.o(attn_output)
present_key_value_state = None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
# Copied from transformers.models.t5.modeling_t5.T5LayerSelfAttention with T5->LongT5
class LongT5LayerSelfAttention(nn.Module):
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.SelfAttention = LongT5Attention(config, has_relative_attention_bias=has_relative_attention_bias)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
past_key_value=None,
use_cache=False,
output_attentions=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.SelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5LayerLocalSelfAttention(nn.Module):
"""Local self attention used in encoder"""
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.LocalSelfAttention = LongT5LocalAttention(config, has_relative_attention_bias=has_relative_attention_bias)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
**kwargs: Any, # to accept past_key_value and use_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.LocalSelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5LayerTransientGlobalSelfAttention(nn.Module):
"""Transient-Global self attention used in encoder"""
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.TransientGlobalSelfAttention = LongT5TransientGlobalAttention(
config, has_relative_attention_bias=has_relative_attention_bias
)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
**kwargs: Any, # to accept past_key_value and use_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.TransientGlobalSelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_t5.T5LayerCrossAttention with T5->LongT5
class LongT5LayerCrossAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.EncDecAttention = LongT5Attention(config, has_relative_attention_bias=False)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
key_value_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
past_key_value=None,
use_cache=False,
query_length=None,
output_attentions=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.EncDecAttention(
normed_hidden_states,
mask=attention_mask,
key_value_states=key_value_states,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
query_length=query_length,
output_attentions=output_attentions,
)
layer_output = hidden_states + self.dropout(attention_output[0])
outputs = (layer_output,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5Block(nn.Module):
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.is_decoder = config.is_decoder
if config.is_decoder:
attention_layer = LongT5LayerSelfAttention
elif config.encoder_attention_type == "local":
attention_layer = LongT5LayerLocalSelfAttention
elif config.encoder_attention_type == "transient-global":
attention_layer = LongT5LayerTransientGlobalSelfAttention
else:
raise ValueError(
"For encoder attention mechanism, either `local` or `transient-global` attention type is expected, "
f"but got {config.encoder_attention_type}."
)
self.layer = nn.ModuleList()
self.layer.append(attention_layer(config, has_relative_attention_bias=has_relative_attention_bias))
if self.is_decoder:
self.layer.append(LongT5LayerCrossAttention(config))
self.layer.append(LongT5LayerFF(config))
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
past_key_value=None,
use_cache=False,
output_attentions=False,
return_dict=True,
):
if past_key_value is not None:
if not self.is_decoder:
logger.warning("`past_key_values` is passed to the encoder. Please make sure this is intended.")
expected_num_past_key_values = 2 if encoder_hidden_states is None else 4
if len(past_key_value) != expected_num_past_key_values:
raise ValueError(
f"There should be {expected_num_past_key_values} past states. "
f"{'2 (past / key) for cross attention. ' if expected_num_past_key_values == 4 else ''}"
f"Got {len(past_key_value)} past key / value states"
)
self_attn_past_key_value = past_key_value[:2]
cross_attn_past_key_value = past_key_value[2:]
else:
self_attn_past_key_value, cross_attn_past_key_value = None, None
self_attention_outputs = self.layer[0](
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=self_attn_past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states, present_key_value_state = self_attention_outputs[:2]
attention_outputs = self_attention_outputs[2:] # Keep self-attention outputs and relative position weights
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
do_cross_attention = self.is_decoder and encoder_hidden_states is not None
if do_cross_attention:
# the actual query length is unknown for cross attention
# if using past key value states. Need to inject it here
if present_key_value_state is not None:
query_length = present_key_value_state[0].shape[2]
else:
query_length = None
cross_attention_outputs = self.layer[1](
hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
position_bias=encoder_decoder_position_bias,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
query_length=query_length,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = cross_attention_outputs[0]
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
# Combine self attn and cross attn key value states
if present_key_value_state is not None:
present_key_value_state = present_key_value_state + cross_attention_outputs[1]
# Keep cross-attention outputs and relative position weights
attention_outputs = attention_outputs + cross_attention_outputs[2:]
# Apply Feed Forward layer
hidden_states = self.layer[-1](hidden_states)
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if use_cache:
outputs = outputs + (present_key_value_state,) + attention_outputs
else:
outputs = outputs + attention_outputs
return outputs # hidden-states, present_key_value_states, (self-attention position bias), (self-attention weights), (cross-attention position bias), (cross-attention weights)
class LongT5PreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LongT5Config
base_model_prefix = "transformer"
supports_gradient_checkpointing = True
_no_split_modules = ["LongT5Block"]
@property
# Copied from transformers.models.t5.modeling_t5.T5PreTrainedModel.dummy_inputs
def dummy_inputs(self):
input_ids = torch.tensor(DUMMY_INPUTS)
input_mask = torch.tensor(DUMMY_MASK)
dummy_inputs = {
"decoder_input_ids": input_ids,
"input_ids": input_ids,
"decoder_attention_mask": input_mask,
}
return dummy_inputs
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor # Used for testing weights initialization
if isinstance(module, LongT5LayerNorm):
module.weight.data.fill_(factor * 1.0)
elif isinstance(module, (LongT5Model, LongT5ForConditionalGeneration, LongT5EncoderModel)):
# Mesh TensorFlow embeddings initialization
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L1624
module.shared.weight.data.normal_(mean=0.0, std=factor * 1.0)
elif isinstance(module, LongT5DenseActDense):
# Mesh TensorFlow FF initialization
# See https://github.com/tensorflow/mesh/blob/master/mesh_tensorflow/transformer/transformer_layers.py#L56
# and https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L89
module.wi.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi, "bias") and module.wi.bias is not None:
module.wi.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, LongT5DenseGatedActDense):
module.wi_0.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_0, "bias") and module.wi_0.bias is not None:
module.wi_0.bias.data.zero_()
module.wi_1.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_1, "bias") and module.wi_1.bias is not None:
module.wi_1.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, (LongT5Attention, LongT5LocalAttention, LongT5TransientGlobalAttention)):
# Mesh TensorFlow attention initialization to avoid scaling before softmax
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/attention.py#L136
d_model = self.config.d_model
key_value_proj_dim = self.config.d_kv
n_heads = self.config.num_heads
module.q.weight.data.normal_(mean=0.0, std=factor * ((d_model * key_value_proj_dim) ** -0.5))
module.k.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.v.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.o.weight.data.normal_(mean=0.0, std=factor * ((n_heads * key_value_proj_dim) ** -0.5))
if module.has_relative_attention_bias:
module.relative_attention_bias.weight.data.normal_(mean=0.0, std=factor * ((d_model) ** -0.5))
if isinstance(module, LongT5TransientGlobalAttention):
module.global_relative_attention_bias.weight.data.normal_(
mean=0.0, std=factor * ((d_model) ** -0.5)
)
# Copied from transformers.models.t5.modeling_t5.T5PreTrainedModel._shift_right with T5->LongT5
def _shift_right(self, input_ids):
decoder_start_token_id = self.config.decoder_start_token_id
pad_token_id = self.config.pad_token_id
if decoder_start_token_id is None:
raise ValueError(
"self.model.config.decoder_start_token_id has to be defined. In LongT5 it is usually set to the pad_token_id. "
"See LongT5 docs for more information."
)
# shift inputs to the right
if is_torch_fx_proxy(input_ids):
# Item assignment is not supported natively for proxies.
shifted_input_ids = torch.full(input_ids.shape[:-1] + (1,), decoder_start_token_id)
shifted_input_ids = torch.cat([shifted_input_ids, input_ids[..., :-1]], dim=-1)
else:
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = decoder_start_token_id
if pad_token_id is None:
raise ValueError("self.model.config.pad_token_id has to be defined.")
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
class LongT5Stack(LongT5PreTrainedModel):
def __init__(self, config, embed_tokens=None):
super().__init__(config)
self.embed_tokens = nn.Embedding(config.vocab_size, config.d_model)
if embed_tokens is not None:
self.embed_tokens.weight = embed_tokens.weight
self.is_decoder = config.is_decoder
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.block = nn.ModuleList(
[LongT5Block(config, has_relative_attention_bias=bool(i == 0)) for i in range(config.num_layers)]
)
self.final_layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.t5.modeling_t5.T5Stack.get_input_embeddings
def get_input_embeddings(self):
return self.embed_tokens
# Copied from transformers.models.t5.modeling_t5.T5Stack.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.embed_tokens = new_embeddings
def forward(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
inputs_embeds=None,
head_mask=None,
cross_attn_head_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(
f"You cannot specify both {err_msg_prefix}input_ids and {err_msg_prefix}inputs_embeds at the same time"
)
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(f"You have to specify either {err_msg_prefix}input_ids or {err_msg_prefix}inputs_embeds")
if inputs_embeds is None:
assert self.embed_tokens is not None, "You have to initialize the model with valid token embeddings"
inputs_embeds = self.embed_tokens(input_ids)
batch_size, seq_length = input_shape
# required mask seq length can be calculated via length of past
mask_seq_length = past_key_values[0][0].shape[2] + seq_length if past_key_values is not None else seq_length
if use_cache is True:
assert self.is_decoder, f"`use_cache` can only be set to `True` if {self} is used as a decoder"
if attention_mask is None:
attention_mask = torch.ones(batch_size, mask_seq_length, device=inputs_embeds.device)
# initialize past_key_values with `None` if past does not exist
if past_key_values is None:
past_key_values = [None] * len(self.block)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
# We use local attention in encoder self-attention, otherwise standard self & cross attentions are used
if self.is_decoder:
extended_attention_mask = self.get_extended_attention_mask(
attention_mask, input_shape, inputs_embeds.device
)
elif self.config.encoder_attention_type == "local":
extended_attention_mask = _get_local_attention_mask(attention_mask, self.block_len, inputs_embeds.device)
else: # we need to use both local attention mask and standard extended mask for transient-global attention
extended_attention_mask = attention_mask
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=inputs_embeds.device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.num_layers)
cross_attn_head_mask = self.get_head_mask(cross_attn_head_mask, self.config.num_layers)
present_key_value_states = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if (output_attentions and self.is_decoder) else None
position_bias = None
encoder_decoder_position_bias = None
hidden_states = self.dropout(inputs_embeds)
for i, (layer_module, past_key_value) in enumerate(zip(self.block, past_key_values)):
layer_head_mask = head_mask[i]
cross_attn_layer_head_mask = cross_attn_head_mask[i]
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.forward,
hidden_states,
extended_attention_mask,
position_bias,
encoder_hidden_states,
encoder_extended_attention_mask,
encoder_decoder_position_bias,
layer_head_mask,
cross_attn_layer_head_mask,
None, # past_key_value is always None with gradient checkpointing
use_cache,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask=extended_attention_mask,
position_bias=position_bias,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
encoder_decoder_position_bias=encoder_decoder_position_bias,
layer_head_mask=layer_head_mask,
cross_attn_layer_head_mask=cross_attn_layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
# layer_outputs is a tuple with:
# hidden-states, key-value-states, (self-attention position bias), (self-attention weights), (cross-attention position bias), (cross-attention weights)
if use_cache is False:
layer_outputs = layer_outputs[:1] + (None,) + layer_outputs[1:]
hidden_states, present_key_value_state = layer_outputs[:2]
# We share the position biases between the layers - the first layer store them
# layer_outputs = hidden-states, key-value-states (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
position_bias = layer_outputs[2]
if self.is_decoder and encoder_hidden_states is not None:
encoder_decoder_position_bias = layer_outputs[4 if output_attentions else 3]
# append next layer key value states
if use_cache:
present_key_value_states = present_key_value_states + (present_key_value_state,)
if output_attentions:
all_attentions = all_attentions + (layer_outputs[3],)
if self.is_decoder:
all_cross_attentions = all_cross_attentions + (layer_outputs[5],)
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
present_key_value_states,
all_hidden_states,
all_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=present_key_value_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
LONGT5_START_DOCSTRING = r"""
The LongT5 model was proposed in [LongT5: Efficient Text-To-Text Transformer for Long
Sequences](https://arxiv.org/abs/2112.07916) by Mandy Guo, Joshua Ainslie, David Uthus, Santiago Ontanon, Jianmo
Ni, Yun-Hsuan Sung and Yinfei Yang. It's an encoder-decoder transformer pre-trained in a text-to-text denoising
generative setting. LongT5 model is an extension of T5 model, and it enables using one of the two different
efficient attention mechanisms - (1) Local attention, or (2) Transient-Global attention.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`LongT5Config`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
LONGT5_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
[What are input IDs?](../glossary#input-ids)
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
LONGT5 uses the `pad_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
To know more on how to prepare `decoder_input_ids` for pretraining take a look at [LONGT5
Training](./longt5#training).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the encoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in
`[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, `optional`: *hidden_states*, `optional`: *attentions*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_ENCODER_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Warning message for FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
__HEAD_MASK_WARNING_MSG = """
The input argument `head_mask` was split into two arguments `head_mask` and `decoder_head_mask`. Currently,
`decoder_head_mask` is set to copy `head_mask`, but this feature is deprecated and will be removed in future versions.
If you do not want to use any `decoder_head_mask` now, please set `decoder_head_mask = torch.ones(num_layers,
num_heads)`.
"""
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting raw hidden-states without any specific head on top.",
LONGT5_START_DOCSTRING,
)
class LongT5Model(LongT5PreTrainedModel):
_keys_to_ignore_on_load_unexpected = [
r"decoder.block.0.layer.1.EncDecAttention.relative_attention_bias.weight",
]
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight"]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = LongT5Stack(decoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
def _tie_weights(self):
if self.config.tie_word_embeddings:
self._tie_or_clone_weights(self.encoder.embed_tokens, self.shared)
self._tie_or_clone_weights(self.decoder.embed_tokens, self.shared)
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, LongT5Model
>>> tokenizer = AutoTokenizer.from_pretrained("google/long-t5-local-base")
>>> model = LongT5Model.from_pretrained("google/long-t5-local-base")
>>> # Let's try a very long encoder input.
>>> input_ids = tokenizer(
... 100 * "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> # forward pass
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
if head_mask is not None and decoder_head_mask is None:
if self.config.num_layers == self.config.num_decoder_layers:
warnings.warn(__HEAD_MASK_WARNING_MSG, FutureWarning)
decoder_head_mask = head_mask
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings("""LONGT5 Model with a `language modeling` head on top.""", LONGT5_START_DOCSTRING)
class LongT5ForConditionalGeneration(LongT5PreTrainedModel):
_keys_to_ignore_on_load_unexpected = [
r"decoder.block.0.layer.1.EncDecAttention.relative_attention_bias.weight",
]
_tied_weights_keys = ["encoder.embed_tokens.weight", "decoder.embed_tokens.weight", "lm_head.weight"]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.model_dim = config.d_model
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = LongT5Stack(decoder_config, self.shared)
self.lm_head = nn.Linear(config.d_model, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
def _tie_weights(self):
if self.config.tie_word_embeddings:
self._tie_or_clone_weights(self.encoder.embed_tokens, self.shared)
self._tie_or_clone_weights(self.decoder.embed_tokens, self.shared)
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def get_output_embeddings(self):
return self.lm_head
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.Tensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[-100, 0, ...,
config.vocab_size - 1]`. All labels set to `-100` are ignored (masked), the loss is only computed for
labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, LongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("Stancld/longt5-tglobal-large-16384-pubmed-3k_steps")
>>> model = LongT5ForConditionalGeneration.from_pretrained(
... "Stancld/longt5-tglobal-large-16384-pubmed-3k_steps"
... )
>>> # Let's try a very long input.
>>> inputs = tokenizer(100 * "studies have shown that owning a dog is good for you ", return_tensors="pt")
>>> input_ids = inputs.input_ids
>>> outputs = model.generate(input_ids)
>>> print(tokenizer.decode(outputs[0], skip_special_tokens=True))
abstractthe aim of this article is to provide an overview of the literature on the role of dog
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
if head_mask is not None and decoder_head_mask is None:
if self.config.num_layers == self.config.num_decoder_layers:
warnings.warn(__HEAD_MASK_WARNING_MSG, FutureWarning)
decoder_head_mask = head_mask
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
# Convert encoder inputs in embeddings if needed
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
if labels is not None and decoder_input_ids is None and decoder_inputs_embeds is None:
# get decoder inputs from shifting lm labels to the right
decoder_input_ids = self._shift_right(labels)
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.model_dim**-0.5)
lm_logits = self.lm_head(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss(ignore_index=-100)
labels = labels.to(lm_logits.device)
loss = loss_fct(lm_logits.view(-1, lm_logits.size(-1)), labels.view(-1))
# TODO(thom): Add z_loss https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L666
if not return_dict:
output = (lm_logits,) + decoder_outputs[1:] + encoder_outputs
return ((loss,) + output) if loss is not None else output
return Seq2SeqLMOutput(
loss=loss,
logits=lm_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
def prepare_inputs_for_generation(
self,
input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
past_length = past_key_values[0][0].shape[2]
# Some generation methods already pass only the last input ID
if input_ids.shape[1] > past_length:
remove_prefix_length = past_length
else:
# Default to old behavior: keep only final ID
remove_prefix_length = input_ids.shape[1] - 1
input_ids = input_ids[:, remove_prefix_length:]
return {
"decoder_input_ids": input_ids,
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache,
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return self._shift_right(labels)
def _reorder_cache(self, past_key_values, beam_idx):
# if decoder past is not included in output
# speedy decoding is disabled and no need to reorder
if past_key_values is None:
logger.warning("You might want to consider setting `use_cache=True` to speed up decoding")
return past_key_values
reordered_decoder_past = ()
for layer_past_states in past_key_values:
# get the correct batch idx from layer past batch dim
# batch dim of `past` is at 2nd position
reordered_layer_past_states = ()
for layer_past_state in layer_past_states:
# need to set correct `past` for each of the four key / value states
reordered_layer_past_states = reordered_layer_past_states + (
layer_past_state.index_select(0, beam_idx.to(layer_past_state.device)),
)
assert reordered_layer_past_states[0].shape == layer_past_states[0].shape
assert len(reordered_layer_past_states) == len(layer_past_states)
reordered_decoder_past = reordered_decoder_past + (reordered_layer_past_states,)
return reordered_decoder_past
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting encoder's raw hidden-states without any specific head on top.",
LONGT5_START_DOCSTRING,
)
class LongT5EncoderModel(LongT5PreTrainedModel):
_tied_weights_keys = ["encoder.embed_tokens.weight"]
_keys_to_ignore_on_load_unexpected = [r"decoder"]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
def _tie_weights(self):
if self.config.tie_word_embeddings:
self._tie_or_clone_weights(self.encoder.embed_tokens, self.shared)
def get_encoder(self):
return self.encoder
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(LONGT5_ENCODER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], BaseModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, LongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("google/long-t5-local-base")
>>> model = LongT5EncoderModel.from_pretrained("google/long-t5-local-base")
>>> input_ids = tokenizer(
... 100 * "Studies have been shown that owning a dog is good for you ", return_tensors="pt"
... ).input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return encoder_outputs
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/longt5/modeling_flax_longt5.py | # coding=utf-8
# Copyright 2022 LongT5 Authors and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Flax LongT5 model."""
import copy
from typing import Any, Callable, List, Optional, Tuple
import flax.linen as nn
import jax
import jax.numpy as jnp
import numpy as np
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen import partitioning as nn_partitioning
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax.random import PRNGKey
from ...modeling_flax_outputs import (
FlaxBaseModelOutput,
FlaxBaseModelOutputWithPastAndCrossAttentions,
FlaxCausalLMOutputWithCrossAttentions,
FlaxSeq2SeqLMOutput,
FlaxSeq2SeqModelOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_call_sample_docstring,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_longt5 import LongT5Config
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/long-t5-local-base"
_CONFIG_FOR_DOC = "LongT5Config"
remat = nn_partitioning.remat
# Copied from transformers.models.bart.modeling_flax_bart.shift_tokens_right
def shift_tokens_right(input_ids: jnp.ndarray, pad_token_id: int, decoder_start_token_id: int) -> jnp.ndarray:
"""
Shift input ids one token to the right.
"""
shifted_input_ids = jnp.zeros_like(input_ids)
shifted_input_ids = shifted_input_ids.at[:, 1:].set(input_ids[:, :-1])
shifted_input_ids = shifted_input_ids.at[:, 0].set(decoder_start_token_id)
shifted_input_ids = jnp.where(shifted_input_ids == -100, pad_token_id, shifted_input_ids)
return shifted_input_ids
def _pad_to_multiple(x: jnp.ndarray, block_len: int, axis: int, pad_value: int = 0) -> jnp.ndarray:
"""Pad an array so that a sequence length will be a multiple of `block_len`"""
pad_len = -x.shape[axis] % block_len
pad = [(0, 0)] * x.ndim
pad[axis] = (0, pad_len)
x = jnp.pad(x, pad_width=pad, mode="constant", constant_values=pad_value)
return x
def _split_into_blocks(x: jnp.ndarray, block_len: int, axis: int) -> jnp.ndarray:
"""Split an input array into blocks of a given `block_len` along the given `axis`. If the dimension length
is not a multiple of `block_len`, it will be padded first with selected `pad_value`.
"""
# pad tensor to multiple of block_len
if x.shape[axis] % block_len != 0:
x = _pad_to_multiple(x, block_len, axis, pad_value=0)
num_blocks = x.shape[axis] // block_len
output_shape = x.shape[:axis] + (num_blocks, block_len) + x.shape[(axis + 1) :]
return x.reshape(output_shape)
def _concatenate_3_blocks(x: jnp.ndarray, block_axis: int, sequence_axis: int, pad_value: int = 0) -> jnp.ndarray:
"""Concatenate three consecutive blocks for each input block for local attentiont.
For more information, see: https://arxiv.org/pdf/2112.07916.pdf.
"""
num_blocks = x.shape[block_axis]
pad = [(0, 0)] * x.ndim
pad[block_axis] = (1, 1)
# [batch_size, num_blocks, block_len] -> [batch_size, num_blocks + 2, block_len]
x = jnp.pad(x, pad_width=pad, mode="constant", constant_values=pad_value)
blocks_list: List[np.array] = []
for i in range(3):
# We use indexing approach here:
# https://numpy.org/doc/stable/user/basics.indexing.html#dealing-with-variable-numbers-of-indices-within-programs
indices = [slice(0, None)] * x.ndim
indices[block_axis] = slice(i, i + num_blocks)
indices = tuple(indices)
blocks_list.append(x[indices])
return jnp.concatenate(blocks_list, axis=sequence_axis) # [batch_size, num_blocks, 3 * block_len, ...]
def _make_3block_relative_position_ids(block_len: int) -> jnp.ndarray:
"""Makes 3-blocked relative position ids for local attention."""
position_ids = jnp.arange(3 * block_len, dtype=jnp.int32)
center_position_ids = position_ids[block_len:-block_len]
relative_position_ids = position_ids[None, :] - center_position_ids[:, None] # [block_len, 3 * block_len]
return relative_position_ids
def _mask_local_attention_mask(local_attention_mask: np.ndarray, block_len: int) -> jnp.ndarray:
"""Mask local attention mask to enforce that tokens are not allowed to attend tokens farther than ``local_radius."""
relative_position_ids = _make_3block_relative_position_ids(block_len)
locality_mask = jnp.abs(relative_position_ids) < block_len
locality_mask = locality_mask[None, None, :, :]
return jnp.logical_and(local_attention_mask, locality_mask)
def _get_local_attention_mask(attention_mask: np.ndarray, block_len: int) -> jnp.ndarray:
"""Prepare attention mask to be applied for a local attention."""
# [batch_size, num_blocks, block_len]
_blocked_attention_mask = _split_into_blocks(attention_mask, block_len, axis=1)
# [batch_size, num_block, 3 * block_len]
_3blocked_attention_mask = _concatenate_3_blocks(_blocked_attention_mask, block_axis=1, sequence_axis=2)
_blocked_attention_mask = _blocked_attention_mask[..., None]
_3blocked_attention_mask = _3blocked_attention_mask[..., None, :]
# [batch_size, num_block, block_len, 3 * block_len]
local_attention_mask = jnp.logical_and(_blocked_attention_mask, _3blocked_attention_mask)
local_attention_mask = _mask_local_attention_mask(local_attention_mask, block_len)
# [batch_size, 1, num_block, block_len, 3 * block_len]
return local_attention_mask[:, None, ...]
def _make_global_fixed_block_ids(attention_mask: np.ndarray, global_block_size: int) -> Tuple[jnp.ndarray, np.ndarray]:
"""Obtain the "fixed block" global id corresponding to each input token.
This implementation is a simlified version of the original Flaxformr implementation adopted from:
https://github.com/google/flaxformer/blob/main/flaxformer/architectures/longt5/long_attention.py.
In our scenario, as we use this strategy only for a decoder, orphan tokens, i.e. those tokens which do not make for
the whole fixed block, are assigned to the preceding block.
Padding tokens from the original sequence are represented by -1.
"""
batch_size, seq_len = attention_mask.shape[:2]
def handle_orphan_tokens(block_ids: np.ndarray) -> jnp.ndarray:
block_ends = (jnp.arange(seq_len) % global_block_size) == global_block_size - 1
true_block_ends = jnp.logical_and(block_ends, block_ids >= 0)
full_blocks = true_block_ends.sum(-1)[..., None]
block_ids = jnp.minimum(block_ids, full_blocks - 1)
return block_ids
fixed_block_mask = jnp.ones_like(attention_mask) / global_block_size
fixed_block_mask = jnp.cumsum(fixed_block_mask, axis=1) - fixed_block_mask
mask = jnp.where(attention_mask != 0.0, 1.0, -1000.0)
global_block_ids = jnp.maximum(
jnp.floor(mask + fixed_block_mask - 1.0), jnp.array(-1.0, dtype=attention_mask.dtype)
)
# set padding tokens to -1
global_block_ids = (global_block_ids * attention_mask) + (attention_mask - 1)
# [batch_size, seq_len]
global_block_ids = handle_orphan_tokens(global_block_ids)
num_globals = seq_len // global_block_size
# [batch_size, seq_len // global_block_size]
if num_globals > 0:
_sequence_block_ids_max = jnp.repeat(global_block_ids.max(axis=-1)[:, None], repeats=num_globals, axis=1)
else:
_sequence_block_ids_max = jnp.zeros((batch_size, 0), dtype=global_block_ids.dtype)
global_segment_ids = jnp.cumsum(jnp.ones((batch_size, num_globals)), axis=-1) - 1
global_segment_ids = jnp.where(global_segment_ids <= _sequence_block_ids_max, 1, 0)
return global_block_ids, global_segment_ids
def _make_side_relative_position_ids(attention_mask: np.ndarray, global_block_size: int) -> np.ndarray:
"""Create the relative position tensor for local -> global attention."""
block_ids, global_segment_ids = _make_global_fixed_block_ids(attention_mask, global_block_size)
global_seq_len = global_segment_ids.shape[-1]
global_positions = jnp.arange(global_seq_len)
side_relative_position = global_positions - block_ids[..., None]
return side_relative_position
def _create_global_aggregates(hidden_states: np.ndarray, block_ids: np.ndarray, global_seq_len: int) -> np.ndarray:
"""Compute individual block aggregates by summing over individual blocks."""
# (batch..., seq_len, global_seq_len))
one_hot_block_ids = jax.nn.one_hot(block_ids, global_seq_len)
return jnp.einsum("...nd,...ng->...gd", hidden_states, one_hot_block_ids)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerNorm with T5->LongT5
class FlaxLongT5LayerNorm(nn.Module):
hidden_size: int
dtype: jnp.dtype = jnp.float32
eps: float = 1e-6
weight_init: Callable[..., np.ndarray] = jax.nn.initializers.ones
def setup(self):
self.weight = self.param("weight", self.weight_init, (self.hidden_size,))
def __call__(self, hidden_states):
"""
Construct a layernorm module in the LongT5 style; No bias and no subtraction of mean.
"""
# layer norm should always be calculated in float32
variance = jnp.power(hidden_states.astype("f4"), 2).mean(axis=-1, keepdims=True)
hidden_states = hidden_states / jnp.sqrt(variance + self.eps)
return self.weight * hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5DenseActDense with T5->LongT5
class FlaxLongT5DenseActDense(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32
def setup(self):
wi_init_std = self.config.initializer_factor * (self.config.d_model**-0.5)
wo_init_std = self.config.initializer_factor * (self.config.d_ff**-0.5)
self.wi = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wo = nn.Dense(
self.config.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wo_init_std),
dtype=self.dtype,
)
self.dropout = nn.Dropout(self.config.dropout_rate)
self.act = ACT2FN[self.config.dense_act_fn]
def __call__(self, hidden_states, deterministic=True):
hidden_states = self.wi(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5DenseGatedActDense with T5->LongT5
class FlaxLongT5DenseGatedActDense(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
wi_init_std = self.config.initializer_factor * (self.config.d_model**-0.5)
wo_init_std = self.config.initializer_factor * (self.config.d_ff**-0.5)
self.wi_0 = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wi_1 = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wo = nn.Dense(
self.config.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wo_init_std),
dtype=self.dtype,
)
self.dropout = nn.Dropout(self.config.dropout_rate)
self.act = ACT2FN[self.config.dense_act_fn]
def __call__(self, hidden_states, deterministic):
hidden_gelu = self.act(self.wi_0(hidden_states))
hidden_linear = self.wi_1(hidden_states)
hidden_states = hidden_gelu * hidden_linear
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerFF with T5->LongT5
class FlaxLongT5LayerFF(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
if self.config.is_gated_act:
self.DenseReluDense = FlaxLongT5DenseGatedActDense(self.config, dtype=self.dtype)
else:
self.DenseReluDense = FlaxLongT5DenseActDense(self.config, dtype=self.dtype)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(self, hidden_states, deterministic=True):
forwarded_states = self.layer_norm(hidden_states)
forwarded_states = self.DenseReluDense(forwarded_states, deterministic=deterministic)
hidden_states = hidden_states + self.dropout(forwarded_states, deterministic=deterministic)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention with T5->LongT5
class FlaxLongT5Attention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
causal: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
@staticmethod
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, query_length, key_length):
"""Compute binned relative position bias"""
context_position = jnp.arange(query_length, dtype="i4")[:, None]
memory_position = jnp.arange(key_length, dtype="i4")[None, :]
relative_position = memory_position - context_position
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=(not self.causal),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, :, :, :]
return values
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.inner_dim,))
@nn.compact
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = jax.lax.dynamic_update_slice(cached_key.value, key, indices)
value = jax.lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions
# that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def _create_position_bias(
self, key_states, query_states, attention_mask, init_cache, seq_length, causal_attention_mask_shift
):
cache_is_filled = self.causal and self.has_variable("cache", "cached_key") and (not init_cache)
key_length = key_states.shape[1]
query_length = key_length if cache_is_filled else query_states.shape[1]
if self.has_relative_attention_bias:
position_bias = self.compute_bias(query_length, key_length)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, self.n_heads, query_length, key_length), dtype=self.dtype)
# if key and values are already calculated, only the last query position bias should be taken
if cache_is_filled:
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
position_bias = jax.lax.dynamic_slice(
position_bias,
(0, 0, causal_attention_mask_shift, 0),
(1, self.n_heads, seq_length, max_decoder_length),
)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
use_cache=False,
output_attentions=False,
deterministic=True,
init_cache=False,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
# for fast decoding causal attention mask should be shifted
causal_attention_mask_shift = (
self.variables["cache"]["cache_index"] if (self.has_variable("cache", "cached_key") and self.causal) else 0
)
# create causal attention_mask; attention_mask has to be defined when model is causal
if self.causal:
causal_attention_mask = make_causal_mask(attention_mask, dtype="bool")
# fast decoding for generate requires special attention_mask
if self.has_variable("cache", "cached_key"):
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_attention_mask = jax.lax.dynamic_slice(
causal_attention_mask,
(0, 0, causal_attention_mask_shift, 0),
(1, 1, seq_length, max_decoder_length),
)
# broadcast causal attention mask & attention mask to fit for merge
causal_attention_mask = jnp.broadcast_to(
causal_attention_mask, (batch_size,) + causal_attention_mask.shape[1:]
)
attention_mask = jnp.broadcast_to(
jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_attention_mask.shape
)
attention_mask = combine_masks(attention_mask, causal_attention_mask)
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# replace masked positions with -10_000
if attention_mask is not None:
mask_value = jnp.finfo(self.dtype).min
attention_mask = jax.lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, mask_value).astype(self.dtype),
)
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(
key_states, query_states, attention_mask, init_cache, seq_length, causal_attention_mask_shift
)
if attention_mask is not None:
position_bias = position_bias + attention_mask
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5LocalAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.local_radius = self.config.local_radius
self.block_len = self.local_radius + 1
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
@staticmethod
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
memory_position = jnp.arange(3 * block_length, dtype="i4")
context_position = memory_position[block_length:-block_length]
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, None, :, :, :]
return values
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[0], -1, self.inner_dim)
def _create_position_bias(self, block_len: int, attention_mask: Optional[np.ndarray]) -> np.ndarray:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if self.has_relative_attention_bias:
position_bias = self.compute_bias(block_len)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, 1, self.n_heads, block_len, 3 * block_len), dtype=self.dtype)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, head_dim)
query_states = _split_into_blocks(query_states, self.block_len, axis=1)
key_states = _split_into_blocks(key_states, self.block_len, axis=1)
value_states = _split_into_blocks(value_states, self.block_len, axis=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_axis=1, sequence_axis=2)
value_states = _concatenate_3_blocks(value_states, block_axis=1, sequence_axis=2)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
if attention_mask is not None:
attention_mask = _get_local_attention_mask(attention_mask, self.block_len)
# replace masked positions with -10_000
attention_mask = jax.lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, -1e10).astype(self.dtype),
)
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(self.block_len, attention_mask)
if attention_mask is not None:
position_bias = position_bias + attention_mask.swapaxes(1, 2)
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
attn_output = attn_output[:, :seq_length, :]
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5TransientGlobalAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.local_radius = self.config.local_radius
self.block_len = self.local_radius + 1
self.global_block_size = self.config.global_block_size
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
# Relativen attention bias & Layer norm for global attention
if self.has_relative_attention_bias:
self.global_relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
self.global_input_layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
@staticmethod
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
memory_position = jnp.arange(3 * block_length, dtype="i4")
context_position = memory_position[block_length:-block_length]
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, None, :, :, :]
return values
def compute_side_bias(self, attention_mask: np.ndarray, global_segment_ids: np.ndarray) -> np.ndarray:
# (batch_size, 1, 1, seq_len, global_seq_len)
side_attention_mask = jnp.equal(attention_mask[..., None], global_segment_ids[:, None, :])[:, None, ...]
attention_side_bias = jax.lax.select(
side_attention_mask > 0,
jnp.full(side_attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(side_attention_mask.shape, -1e10).astype(self.dtype),
)
# (batch_size, seq_len, global_seq_len)
side_relative_position = _make_side_relative_position_ids(attention_mask, self.global_block_size)
side_relative_position_bucket = self._relative_position_bucket(
side_relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (batch_size, seq_len, global_seq_len, num_heads)
side_bias = self.global_relative_attention_bias(side_relative_position_bucket)
# (batch_size, 1, num_heads, seq_len, global_seq_len)
side_bias = jnp.transpose(side_bias, (0, 3, 1, 2))
# (batch_size, num_heads, seq_len, global_seq_len)
attention_side_bias = attention_side_bias + side_bias
return attention_side_bias
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[0], -1, self.inner_dim)
def _create_position_bias(self, block_len: int, attention_mask: Optional[np.ndarray]) -> np.ndarray:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if self.has_relative_attention_bias:
position_bias = self.compute_bias(block_len)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, 1, self.n_heads, block_len, 3 * block_len), dtype=self.dtype)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# Prepare components for transient-global attention
# Obtain block_ids and global_segment_ids
# global_seq_len := seq_len // self.global_block_size
# shapes: (batch_size, seq_len) & (batch_size, global_seq_len)
block_ids, global_segment_ids = _make_global_fixed_block_ids(
attention_mask if attention_mask is not None else jnp.ones((batch_size, seq_length)),
self.global_block_size,
)
# Create global inputs
_global_seq_len = global_segment_ids.shape[-1]
global_inputs = _create_global_aggregates(hidden_states, block_ids, _global_seq_len)
global_inputs = self.global_input_layer_norm(global_inputs)
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# Get global/side key/value_states
side_key_states = self.k(global_inputs)
side_value_states = self.v(global_inputs)
# reshape to (batch_size, global_seq_len, n_heads, head_dim)
side_key_states = self._split_heads(side_key_states)
side_value_states = self._split_heads(side_value_states)
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, head_dim)
query_states = _split_into_blocks(query_states, self.block_len, axis=1)
key_states = _split_into_blocks(key_states, self.block_len, axis=1)
value_states = _split_into_blocks(value_states, self.block_len, axis=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_axis=1, sequence_axis=2)
value_states = _concatenate_3_blocks(value_states, block_axis=1, sequence_axis=2)
# Tile side inputs across local key/value blocks
# New shape: (batch_size, num_blocks, global_seq_len, n_heads, dim_per_head)
reps = [1] * (side_key_states.ndim + 1)
reps[1] = key_states.shape[1]
side_key_states = jnp.tile(side_key_states[:, None, ...], reps)
side_value_states = jnp.tile(side_value_states[:, None, ...], reps)
# Concatenate "local" and "side"/"global" key/value states to allow each token to attend global aggregated ones
# New shape: (batch_size, num_blocks, 3 * block_len + global_seq_len, n_heads, dim_per_head)
key_states = jnp.concatenate((key_states, side_key_states), axis=2)
value_states = jnp.concatenate((value_states, side_value_states), axis=2)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
if attention_mask is not None:
local_attention_mask = _get_local_attention_mask(attention_mask, self.block_len)
local_attention_mask = jax.lax.select(
local_attention_mask > 0,
jnp.full(local_attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(local_attention_mask.shape, -1e10).astype(self.dtype),
)
else:
local_attention_mask = None
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(self.block_len, attention_mask)
if local_attention_mask is not None:
position_bias = position_bias + local_attention_mask.swapaxes(1, 2)
# Calculate global/side bias - shape: # (batch_size, num_heads, seq_len, global_seq_len)
if attention_mask is None:
attention_mask = jnp.ones((batch_size, seq_length))
side_position_bias = self.compute_side_bias(attention_mask, global_segment_ids)
side_position_bias = _split_into_blocks(side_position_bias, self.block_len, axis=-2)
side_position_bias = jnp.swapaxes(side_position_bias, 1, 2)
position_bias = jnp.concatenate((position_bias, side_position_bias), axis=-1)
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
attn_output = attn_output[:, :seq_length, :]
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5LayerLocalSelfAttention(nn.Module):
"""Local self attention used in encoder"""
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.LocalSelfAttention = FlaxLongT5LocalAttention(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
**kwargs: Any, # to accept init_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.LocalSelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class FlaxLongT5LayerTransientGlobalSelfAttention(nn.Module):
"""Transient-Global self attention used in encoder"""
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.TransientGlobalSelfAttention = FlaxLongT5TransientGlobalAttention(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
**kwargs: Any, # to accept init_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.TransientGlobalSelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerSelfAttention with T5->LongT5
class FlaxLongT5LayerSelfAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.SelfAttention = FlaxLongT5Attention(
self.config,
has_relative_attention_bias=self.has_relative_attention_bias,
causal=self.config.causal,
dtype=self.dtype,
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
init_cache=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.SelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerCrossAttention with T5->LongT5
class FlaxLongT5LayerCrossAttention(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.EncDecAttention = FlaxLongT5Attention(
self.config, has_relative_attention_bias=False, causal=False, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
key_value_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.EncDecAttention(
normed_hidden_states,
attention_mask=attention_mask,
key_value_states=key_value_states,
position_bias=position_bias,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class FlaxLongT5Block(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.causal = self.config.causal
if self.causal:
attention_layer = FlaxLongT5LayerSelfAttention
elif self.config.encoder_attention_type == "local":
attention_layer = FlaxLongT5LayerLocalSelfAttention
elif self.config.encoder_attention_type == "transient-global":
attention_layer = FlaxLongT5LayerTransientGlobalSelfAttention
else:
raise ValueError(
"For encoder attention mechanism, either `local` or `transient-global` attention type is expected, "
f"but got {self.config.encoder_attention_type}."
)
self.layer = (
attention_layer(
self.config,
has_relative_attention_bias=self.has_relative_attention_bias,
name=str(0),
dtype=self.dtype,
),
)
feed_forward_index = 1
if self.causal:
self.layer += (FlaxLongT5LayerCrossAttention(self.config, name=str(1), dtype=self.dtype),)
feed_forward_index += 1
self.layer += (FlaxLongT5LayerFF(self.config, name=str(feed_forward_index), dtype=self.dtype),)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Block.__call__ with T5->LongT5
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
output_attentions=False,
return_dict=True,
deterministic=True,
init_cache=False,
):
self_attention_outputs = self.layer[0](
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = self_attention_outputs[0]
attention_outputs = self_attention_outputs[1:] # Keep self-attention outputs and relative position weights
do_cross_attention = self.causal and encoder_hidden_states is not None
if do_cross_attention:
cross_attention_outputs = self.layer[1](
hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
position_bias=encoder_decoder_position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = cross_attention_outputs[0]
# Keep cross-attention outputs and relative position weights
attention_outputs = attention_outputs + cross_attention_outputs[1:]
# Apply Feed Forward layer
hidden_states = self.layer[-1](hidden_states, deterministic=deterministic)
outputs = (hidden_states,)
outputs = outputs + attention_outputs
# returns hidden-states, present_key_value_states, (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerCollection with T5->LongT5
class FlaxLongT5LayerCollection(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layer = FlaxLongT5Block(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
output_attentions=False,
deterministic=True,
init_cache=False,
):
return self.layer(
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
encoder_decoder_position_bias=encoder_decoder_position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5BlockCollection with T5->LongT5
class FlaxLongT5BlockCollection(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.causal = self.config.causal
if self.gradient_checkpointing:
FlaxLongT5CheckpointLayer = remat(FlaxLongT5LayerCollection, static_argnums=(6, 7, 8))
self.blocks = [
FlaxLongT5CheckpointLayer(
self.config,
has_relative_attention_bias=(i == 0),
dtype=self.dtype,
name=str(i),
)
for i in range(self.config.num_layers)
]
else:
self.blocks = [
FlaxLongT5LayerCollection(
self.config,
has_relative_attention_bias=(i == 0),
dtype=self.dtype,
name=str(i),
)
for i in range(self.config.num_layers)
]
def __call__(
self,
hidden_states=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
output_attentions: bool = False,
output_hidden_states: bool = False,
deterministic: bool = True,
init_cache: bool = False,
):
# Prepare head mask if needed
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if (output_attentions and self.causal) else None
position_bias = None
encoder_decoder_position_bias = None
for i, layer_module in enumerate(self.blocks):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
position_bias,
encoder_hidden_states,
encoder_attention_mask,
encoder_decoder_position_bias,
output_attentions,
deterministic,
init_cache,
)
hidden_states = layer_outputs[0]
# We share the position biases between the layers - the first layer store them
# layer_outputs = hidden-states, key-value-states (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
position_bias = layer_outputs[1]
if self.causal and encoder_hidden_states is not None:
encoder_decoder_position_bias = layer_outputs[3 if output_attentions else 2]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[2],)
if self.causal:
all_cross_attentions = all_cross_attentions + (layer_outputs[4],)
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Stack with T5->LongT5
class FlaxLongT5Stack(nn.Module):
config: LongT5Config
embed_tokens: nn.Embed
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.causal = self.config.causal
self.block = FlaxLongT5BlockCollection(
self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.final_layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
init_cache: bool = False,
):
hidden_states = self.embed_tokens(input_ids)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
outputs = self.block(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = outputs[0]
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
# Add last layer
all_hidden_states = None
if output_hidden_states:
all_hidden_states = outputs.hidden_states
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
if output_hidden_states:
return (
hidden_states,
all_hidden_states,
) + outputs[2:]
return (hidden_states,) + outputs[1:]
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
LONGT5_ENCODE_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_DECODE_INPUTS_DOCSTRING = r"""
Args:
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
For training, `decoder_input_ids` should be provided.
encoder_outputs (`tuple(tuple(jnp.ndarray)`):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
encoder_attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should modify to your needs. See diagram 1 in [the
paper](https://arxiv.org/abs/1910.13461) for more information on the default strategy.
past_key_values (`Dict[str, np.ndarray]`, *optional*, returned by `init_cache` or when passing previous `past_key_values`):
Dictionary of pre-computed hidden-states (key and values in the attention blocks) that can be used for fast
auto-regressive decoding. Pre-computed key and value hidden-states are of shape *[batch_size, max_length]*.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
[What are input IDs?](../glossary#input-ids)
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
LONGT5 uses the `pad_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
To know more on how to prepare `decoder_input_ids` for pretraining take a look at [LONGT5
Training](./longt5#training).
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
encoder_outputs (`tuple(tuple(jnp.ndarray)`, *optional*):
Tuple consists of (`last_hidden_state`, `optional`: *hidden_states*, `optional`: *attentions*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(jnp.ndarray))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class FlaxLongT5PreTrainedModel(FlaxPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LongT5Config
base_model_prefix = "transformer"
module_class: nn.Module = None
def __init__(
self,
config: LongT5Config,
input_shape: Tuple[int] = (1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def enable_gradient_checkpointing(self):
self._module = self.module_class(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=True,
)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
attention_mask = jnp.ones_like(input_ids)
decoder_input_ids = jnp.ones_like(input_ids)
decoder_attention_mask = jnp.ones_like(input_ids)
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(
rngs,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
def __call__(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
decoder_input_ids: jnp.ndarray = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if decoder_input_ids is None:
raise ValueError(
"Make sure to provide both `input_ids` and `decoder_input_ids`. `decoder_input_ids` is not passed"
" here."
)
# prepare encoder inputs
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# prepare decoder inputs
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
# Handle any PRNG if needed
rngs = {"dropout": dropout_rng} if dropout_rng is not None else {}
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
)
def init_cache(self, batch_size, max_length, encoder_outputs):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
encoder_outputs (`Union[FlaxBaseModelOutput, tuple(tuple(jnp.ndarray)]`):
`encoder_outputs` consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*:
`attentions`). `last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*)
is a sequence of hidden-states at the output of the last layer of the encoder. Used in the
cross-attention of the decoder.
"""
# init input variables to retrieve cache
decoder_input_ids = jnp.ones((batch_size, max_length), dtype="i4")
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
init_variables = self.module.init(
jax.random.PRNGKey(0),
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
init_cache=True,
method=_decoder_forward, # we only need to call the decoder to init the cache
)
return unfreeze(init_variables["cache"])
@add_start_docstrings(LONGT5_ENCODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutput, config_class=LongT5Config)
def encode(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
def _encoder_forward(module, input_ids, attention_mask, **kwargs):
encode_module = module._get_encoder_module()
return encode_module(input_ids, attention_mask, **kwargs)
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
method=_encoder_forward,
)
@add_start_docstrings(LONGT5_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutputWithPastAndCrossAttentions, config_class=LongT5Config)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> import jax.numpy as jnp
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> logits = outputs.logits
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxLongT5Attention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past = outputs
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past = outputs
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
LONGT5_START_DOCSTRING = r"""
The LongT5 model was proposed in [LongT5: Efficient Text-To-Text Transformer for Long
Sequences](https://arxiv.org/abs/2112.07916) by Mandy Guo, Joshua Ainslie, David Uthus, Santiago Ontanon, Jianmo
Ni, Yun-Hsuan Sung and Yinfei Yang. It's an encoder-decoder transformer pre-trained in a text-to-text denoising
generative setting. LongT5 model is an extension of T5 model, and it enables using one of the two different
efficient attention mechanisms - (1) Local attention, or (2) Transient-Global attention.
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Flax Linen
[flax.nn.Module](https://flax.readthedocs.io/en/latest/_autosummary/flax.nn.module.html) subclass. Use it as a
regular Flax Module and refer to the Flax documentation for all matter related to general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`LongT5Config`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting raw hidden-stateswithout any specific head on top.",
LONGT5_START_DOCSTRING,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Module with T5->LongT5
class FlaxLongT5Module(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def _get_encoder_module(self):
return self.encoder
def _get_decoder_module(self):
return self.decoder
def setup(self):
self.shared = nn.Embed(
self.config.vocab_size,
self.config.d_model,
embedding_init=jax.nn.initializers.normal(self.config.initializer_factor * 1.0),
dtype=self.dtype,
)
encoder_config = copy.deepcopy(self.config)
encoder_config.causal = False
self.encoder = FlaxLongT5Stack(
encoder_config,
embed_tokens=self.shared,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
decoder_config = copy.deepcopy(self.config)
decoder_config.causal = True
decoder_config.num_layers = self.config.num_decoder_layers
self.decoder = FlaxLongT5Stack(
decoder_config,
embed_tokens=self.shared,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
def __call__(
self,
input_ids=None,
attention_mask=None,
decoder_input_ids=None,
decoder_attention_mask=None,
encoder_outputs=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
deterministic: bool = True,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return FlaxSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Model with T5->LongT5
class FlaxLongT5Model(FlaxLongT5PreTrainedModel):
module_class = FlaxLongT5Module
append_call_sample_docstring(FlaxLongT5Model, _CHECKPOINT_FOR_DOC, FlaxSeq2SeqModelOutput, _CONFIG_FOR_DOC)
FLAX_LONGT5_MODEL_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5Model
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5Model.from_pretrained("google/long-t5-local-base")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="np"
... ).input_ids
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="np").input_ids
>>> # forward pass
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```
"""
overwrite_call_docstring(FlaxLongT5Model, LONGT5_INPUTS_DOCSTRING + FLAX_LONGT5_MODEL_DOCSTRING)
append_replace_return_docstrings(FlaxLongT5Model, output_type=FlaxSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_start_docstrings("""LONGT5 Model with a `language modeling` head on top.""", LONGT5_START_DOCSTRING)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5ForConditionalGenerationModule with T5->LongT5
class FlaxLongT5ForConditionalGenerationModule(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def _get_encoder_module(self):
return self.encoder
def _get_decoder_module(self):
return self.decoder
def setup(self):
self.model_dim = self.config.d_model
self.shared = nn.Embed(
self.config.vocab_size,
self.config.d_model,
embedding_init=jax.nn.initializers.normal(self.config.initializer_factor),
dtype=self.dtype,
)
encoder_config = copy.deepcopy(self.config)
encoder_config.causal = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = FlaxLongT5Stack(
encoder_config, self.shared, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
decoder_config = copy.deepcopy(self.config)
decoder_config.causal = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = self.config.num_decoder_layers
self.decoder = FlaxLongT5Stack(
decoder_config, self.shared, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.lm_head = nn.Dense(
self.config.vocab_size,
use_bias=False,
kernel_init=jax.nn.initializers.normal(self.config.initializer_factor),
dtype=self.dtype,
)
def __call__(
self,
input_ids=None,
attention_mask=None,
decoder_input_ids=None,
decoder_attention_mask=None,
encoder_outputs=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
deterministic: bool = True,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.model_dim**-0.5)
if self.config.tie_word_embeddings:
shared_embedding = self.shared.variables["params"]["embedding"]
lm_logits = self.lm_head.apply({"params": {"kernel": shared_embedding.T}}, sequence_output)
else:
lm_logits = self.lm_head(sequence_output)
if not return_dict:
return (lm_logits,) + decoder_outputs[1:] + encoder_outputs
return FlaxSeq2SeqLMOutput(
logits=lm_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
class FlaxLongT5ForConditionalGeneration(FlaxLongT5PreTrainedModel):
module_class = FlaxLongT5ForConditionalGenerationModule
@add_start_docstrings(LONGT5_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxCausalLMOutputWithCrossAttentions, config_class=LongT5Config)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> import jax.numpy as jnp
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "summarize: My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> logits = outputs.logits
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxLongT5Attention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
decoder_outputs = decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.config.d_model**-0.5)
if self.config.tie_word_embeddings:
shared_embedding = module.shared.variables["params"]["embedding"]
lm_logits = module.lm_head.apply({"params": {"kernel": shared_embedding.T}}, sequence_output)
else:
lm_logits = module.lm_head(sequence_output)
return lm_logits, decoder_outputs
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
if past_key_values is None:
lm_logits, decoder_outputs = outputs
else:
(lm_logits, decoder_outputs), past = outputs
if return_dict:
outputs = FlaxCausalLMOutputWithCrossAttentions(
logits=lm_logits,
hidden_states=decoder_outputs.hidden_states,
attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
)
else:
outputs = (lm_logits,) + decoder_outputs[1:]
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
def prepare_inputs_for_generation(
self,
decoder_input_ids,
max_length,
attention_mask: Optional[jax.Array] = None,
decoder_attention_mask: Optional[jax.Array] = None,
encoder_outputs=None,
**kwargs,
):
# initializing the cache
batch_size, seq_length = decoder_input_ids.shape
past_key_values = self.init_cache(batch_size, max_length, encoder_outputs)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyways.
# Thus we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if decoder_attention_mask is not None:
extended_attention_mask = jax.lax.dynamic_update_slice(
extended_attention_mask, decoder_attention_mask, (0, 0)
)
return {
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"encoder_attention_mask": attention_mask,
"decoder_attention_mask": extended_attention_mask,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
return model_kwargs
FLAX_LONGT5_CONDITIONAL_GENERATION_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> ARTICLE_TO_SUMMARIZE = "summarize: My friends are cool but they eat too many carbs."
>>> inputs = tokenizer([ARTICLE_TO_SUMMARIZE], return_tensors="np")
>>> # Generate Summary
>>> summary_ids = model.generate(inputs["input_ids"]).sequences
>>> print(tokenizer.decode(summary_ids[0], skip_special_tokens=True, clean_up_tokenization_spaces=False))
```
"""
overwrite_call_docstring(
FlaxLongT5ForConditionalGeneration, LONGT5_INPUTS_DOCSTRING + FLAX_LONGT5_CONDITIONAL_GENERATION_DOCSTRING
)
append_replace_return_docstrings(
FlaxLongT5ForConditionalGeneration, output_type=FlaxSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/modeling_tf_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
from __future__ import annotations
import os
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from tensorflow.keras.activations import gelu
from tensorflow.keras.layers import Dense, Dropout, Embedding, Layer, LayerNormalization
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_tf_outputs import (
TFBaseModelOutputWithPastAndCrossAttentions,
TFBaseModelOutputWithPoolingAndCrossAttentions,
TFMaskedLMOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
shape_list,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, stable_softmax
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = tf.split(x, 2, axis=-1)
return tf.concat((-x2, x1), axis=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : tf.shape(x)[-2], :]
sin = sin[:, :, : tf.shape(x)[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + tf.linalg.matrix_transpose(x) # Transposes last two dimensions only
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = tf.reduce_sum(x, -1, keepdims=True)
a2 = tf.reduce_sum(x, -2, keepdims=True)
a12 = tf.reduce_sum(x, (-1, -2), keepdims=True)
avg = a1 * a2
avg = avg / a12
normalized = x - avg
return normalized
class TFRotaryEmbedding(Layer):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int, name=None):
super().__init__(name=name)
# Matt: The PyTorch version of this layer does a lot of work to cache values, but we just rely on TF compilation
# and/or XLA to sort out constants like that. It actually may not seem like this layer needs to be stateful at
# all when we benefit from TF compilation, but it does. The reason is that self.inv_freq is a buffer in the
# original implementation, but all the shared ESM checkpoints were trained with fp16 params. This means that
# the inv_freq tensor was stored as a float16, and we need to replicate those lower-precision values or our
# models give different outputs from the original.
self.dim = dim
def build(self, input_shape):
super().build(input_shape)
self.inv_freq = self.add_weight(
"inv_freq", shape=(self.dim // 2,), dtype=tf.float32, initializer=get_initializer(1.0), trainable=False
)
self.inv_freq.assign(
1.0 / (10000 ** (tf.range(start=0, limit=self.dim, delta=2, dtype=tf.float32) / self.dim))
)
def _compute_cos_sin(self, x, seq_dimension=2):
seq_len = tf.shape(x)[seq_dimension]
t = tf.range(seq_len, dtype=self.inv_freq.dtype)
freqs = tf.einsum("i, j -> ij", t, self.inv_freq) # Outer multiplication
emb = tf.concat((freqs, freqs), axis=-1)[None, None, :, :]
return tf.cos(emb), tf.sin(emb)
def call(self, q: tf.Tensor, k: tf.Tensor) -> Tuple[tf.Tensor, tf.Tensor]:
cos_emb, sin_emb = self._compute_cos_sin(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, cos_emb, sin_emb),
apply_rotary_pos_emb(k, cos_emb, sin_emb),
)
class TFEsmContactPredictionHead(Layer):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
name=None,
):
super().__init__(name=name)
self.eos_idx = eos_idx
self.in_features = in_features
self.regression = Dense(1, use_bias=bias, activation="sigmoid", name="regression")
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("regression"):
self.regression.build((None, self.in_features))
def call(self, tokens, attentions):
# remove eos token attentions
eos_mask = tf.cast(tokens != self.eos_idx, attentions.dtype)
eos_mask = tf.expand_dims(eos_mask, 1) * tf.expand_dims(eos_mask, 2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = shape_list(attentions)
attentions = tf.reshape(attentions, (batch_size, layers * heads, seqlen, seqlen))
# features: batch x channels x tokens x tokens (symmetric)
attentions = average_product_correct(symmetrize(attentions))
attentions = tf.transpose(attentions, perm=(0, 2, 3, 1))
return tf.squeeze(self.regression(attentions), 3)
class TFEsmEmbeddings(Layer):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config, name=None):
super().__init__(name=name)
self.word_embeddings = Embedding(
config.vocab_size,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="word_embeddings",
)
self.position_embeddings = Embedding(
config.max_position_embeddings,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="position_embeddings",
)
if config.emb_layer_norm_before:
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
else:
self.layer_norm = None
# Matt: I think this line was copied incorrectly from BERT, disabling for now
# self.dropout = Dropout(config.hidden_dropout_prob)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.position_ids = tf.range(config.max_position_embeddings)[None, :]
self.padding_idx = config.pad_token_id
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
self.config = config
def call(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings = tf.where((input_ids == self.mask_token_id)[:, :, None], 0.0, embeddings)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = tf.cast(tf.reduce_sum(attention_mask, axis=-1), tf.float32)
masked_tokens = input_ids == self.mask_token_id
mask_ratio_observed = tf.math.count_nonzero(masked_tokens, dtype=tf.float32, axis=-1) / src_lengths
embeddings = embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = embeddings * tf.cast(tf.expand_dims(attention_mask, -1), embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: tf.Tensor
Returns: tf.Tensor
"""
input_shape = shape_list(inputs_embeds)[:-1]
sequence_length = input_shape[1]
position_ids = tf.range(
start=self.padding_idx + 1, limit=sequence_length + self.padding_idx + 1, dtype=tf.int64
)
return tf.broadcast_to(tf.expand_dims(position_ids, 0), input_shape)
class TFEsmSelfAttention(Layer):
def __init__(self, config, position_embedding_type=None, name=None):
super().__init__(name=name)
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = Dense(self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key")
self.value = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = Embedding(
2 * config.max_position_embeddings - 1,
self.attention_head_size,
embeddings_initializer=get_initializer(config.initializer_range),
)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = TFRotaryEmbedding(dim=self.attention_head_size, name="rotary_embeddings")
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: tf.Tensor) -> tf.Tensor:
new_x_shape = shape_list(x)[:-1] + [self.num_attention_heads, self.attention_head_size]
x = tf.reshape(x, new_x_shape)
return tf.transpose(x, perm=(0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
encoder_hidden_states: tf.Tensor | None = None,
encoder_attention_mask: tf.Tensor | None = None,
past_key_value: Tuple[Tuple[tf.Tensor]] | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = tf.concat([past_key_value[0], key_layer], axis=2)
value_layer = tf.concat([past_key_value[1], value_layer], axis=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = shape_list(hidden_states)[1]
position_ids_l = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), -1)
position_ids_r = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), 0)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = tf.cast(positional_embedding, query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = tf.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = attention_probs @ value_layer
context_layer = tf.transpose(context_layer, perm=(0, 2, 1, 3))
new_context_layer_shape = shape_list(context_layer)[:-2] + [self.all_head_size]
context_layer = tf.reshape(context_layer, new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class TFEsmSelfOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmAttention(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.self = TFEsmSelfAttention(config, name="self")
self.output_layer = TFEsmSelfOutput(config, name="output")
self.pruned_heads = set()
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
attention_output = self.output_layer(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class TFEsmIntermediate(tf.keras.layers.Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = tf.nn.gelu(hidden_states)
return hidden_states
class TFEsmOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmLayer(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = TFEsmAttention(config, name="attention")
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TFEsmAttention(config)
self.intermediate = TFEsmIntermediate(config, name="intermediate")
self.output_layer = TFEsmOutput(config, name="output")
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
training=training,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
training=training,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layernorm_output = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(hidden_states=layernorm_output)
layer_output = self.output_layer(
hidden_states=intermediate_output, input_tensor=attention_output, training=training
)
outputs = (layer_output,) + outputs # add attentions if we output them
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
class TFEsmEncoder(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.config = config
self.layer = [TFEsmLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
self.emb_layer_norm_after = LayerNormalization(epsilon=config.layer_norm_eps, name="emb_layer_norm_after")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
training=False,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPooler with Bert->Esm
class TFEsmPooler(tf.keras.layers.Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
class TFEsmPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
ESM_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Keras [Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it as a
regular Keras model and refer to the TF/Keras documentation for all matters related to general usage and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmMainLayer(Layer):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config, add_pooling_layer=True, name=None, **kwargs):
super().__init__(name=name, **kwargs)
self.config = config
self.is_decoder = config.is_decoder
self.embeddings = TFEsmEmbeddings(config, name="embeddings")
self.encoder = TFEsmEncoder(config, name="encoder")
self.pooler = TFEsmPooler(config, name="pooler") if add_pooling_layer else None
self.contact_head = TFEsmContactPredictionHead(
in_features=self.config.num_hidden_layers * self.config.num_attention_heads, bias=True, name="contact_head"
)
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("contact_head"):
self.contact_head.build(input_shape)
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.word_embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
if not self.config.is_decoder:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
if past_key_values is None:
past_key_values_length = 0
past_key_values = [None] * len(self.encoder.layer)
else:
past_key_values_length = shape_list(past_key_values[0][0])[-2]
if attention_mask is None:
attention_mask = tf.fill(dims=(batch_size, seq_length + past_key_values_length), value=1)
embedding_output = self.embeddings(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask_shape = shape_list(attention_mask)
mask_seq_length = seq_length + past_key_values_length
# Copied from `modeling_tf_t5.py`
# Provided a padding mask of dimensions [batch_size, mask_seq_length]
# - if the model is a decoder, apply a causal mask in addition to the padding mask
# - if the model is an encoder, make the mask broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
if self.is_decoder:
seq_ids = tf.range(mask_seq_length)
causal_mask = tf.less_equal(
tf.tile(seq_ids[None, None, :], (batch_size, mask_seq_length, 1)),
seq_ids[None, :, None],
)
causal_mask = tf.cast(causal_mask, dtype=attention_mask.dtype)
extended_attention_mask = causal_mask * attention_mask[:, None, :]
attention_mask_shape = shape_list(extended_attention_mask)
extended_attention_mask = tf.reshape(
extended_attention_mask, (attention_mask_shape[0], 1, attention_mask_shape[1], attention_mask_shape[2])
)
if past_key_values[0] is not None:
# attention_mask needs to be sliced to the shape `[batch_size, 1, from_seq_length - cached_seq_length, to_seq_length]
extended_attention_mask = extended_attention_mask[:, :, -seq_length:, :]
else:
extended_attention_mask = tf.reshape(
attention_mask, (attention_mask_shape[0], 1, 1, attention_mask_shape[1])
)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Copied from `modeling_tf_t5.py` with -1e9 -> -10000
if self.is_decoder and encoder_attention_mask is not None:
# If a 2D ou 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
encoder_attention_mask = tf.cast(encoder_attention_mask, dtype=extended_attention_mask.dtype)
num_dims_encoder_attention_mask = len(shape_list(encoder_attention_mask))
if num_dims_encoder_attention_mask == 3:
encoder_extended_attention_mask = encoder_attention_mask[:, None, :, :]
if num_dims_encoder_attention_mask == 2:
encoder_extended_attention_mask = encoder_attention_mask[:, None, None, :]
# T5 has a mask that can compare sequence ids, we can simulate this here with this transposition
# Cf. https://github.com/tensorflow/mesh/blob/8d2465e9bc93129b913b5ccc6a59aa97abd96ec6/mesh_tensorflow/transformer/transformer_layers.py#L270
# encoder_extended_attention_mask = tf.math.equal(encoder_extended_attention_mask,
# tf.transpose(encoder_extended_attention_mask, perm=(-1, -2)))
encoder_extended_attention_mask = (1.0 - encoder_extended_attention_mask) * -10000.0
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(hidden_states=sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = tf.stack(attns, axis=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attention_mask = tf.cast(attention_mask, attns.dtype)
attns *= attention_mask[:, None, None, None]
attns *= attention_mask[:, None, None, :, None]
return self.contact_head(tokens, attns)
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmModel(TFEsmPreTrainedModel):
def __init__(self, config: EsmConfig, add_pooling_layer=True, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.esm = TFEsmMainLayer(config, add_pooling_layer=add_pooling_layer, name="esm")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
r"""
encoder_hidden_states (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers`)
contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`). Set to `False` during training, `True` during generation
"""
outputs = self.esm(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class TFEsmForMaskedLM(TFEsmPreTrainedModel, TFMaskedLanguageModelingLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.lm_head = TFEsmLMHead(config, name="lm_head")
if config.tie_word_embeddings:
# Ensure word embeddings are built so that we actually have something to tie
with tf.name_scope(os.path.join(self._name_scope(), "esm", "embeddings", "word_embeddings")):
self.esm.embeddings.word_embeddings.build((None, None))
self.lm_head.decoder = self.esm.embeddings.word_embeddings.weights[0]
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
def get_lm_head(self):
return self.lm_head
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
encoder_hidden_states: np.ndarray | tf.Tensor | None = None,
encoder_attention_mask: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
masked_lm_loss = self.hf_compute_loss(labels=labels, logits=prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return TFMaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
class TFEsmLMHead(Layer):
"""ESM Head for masked language modeling."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
if config.tie_word_embeddings:
self.decoder = None
else:
self.decoder = Dense(
config.vocab_size,
kernel_initializer=get_initializer(config.initializer_range),
name="decoder",
use_bias=False,
)
self.config = config
def build(self, input_shape):
super().build(input_shape)
# Separate bias to match the PT model and allow weight cross-loading to work
# Put it in the build so it gets the right name when adding it as a weight
self.bias = self.add_weight("bias", shape=(self.config.vocab_size,), initializer="zeros", trainable=True)
def get_bias(self):
return {"bias": self.bias}
def call(self, features):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
if self.config.tie_word_embeddings:
x = tf.matmul(x, self.decoder, transpose_b=True) + self.bias
else:
x = self.decoder(x) + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForSequenceClassification(TFEsmPreTrainedModel, TFSequenceClassificationLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.classifier = TFEsmClassificationHead(config, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForTokenClassification(TFEsmPreTrainedModel, TFTokenClassificationLoss):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.dropout = Dropout(config.hidden_dropout_prob)
self.classifier = Dense(config.num_labels, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
labels: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFTokenClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class TFEsmClassificationHead(Layer):
"""Head for sentence-level classification tasks."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
self.dropout = Dropout(config.hidden_dropout_prob)
self.out_proj = Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
activation="linear",
name="out_proj",
)
def call(self, features, training=False):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, training=training)
x = self.dense(x)
x = self.dropout(x, training=training)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: tf.Tensor x:
Returns: tf.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = tf.cast(input_ids != padding_idx, tf.int64)
incremental_indices = (tf.cumsum(mask, axis=1) + past_key_values_length) * mask
return incremental_indices + padding_idx
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/configuration_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" ESM model configuration"""
from dataclasses import asdict, dataclass
from typing import Optional
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
# TODO Update this
ESM_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/esm-1b": "https://huggingface.co/facebook/esm-1b/resolve/main/config.json",
# See all ESM models at https://huggingface.co/models?filter=esm
}
class EsmConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`ESMModel`]. It is used to instantiate a ESM model
according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the ESM
[facebook/esm-1b](https://huggingface.co/facebook/esm-1b) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*):
Vocabulary size of the ESM model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`ESMModel`].
mask_token_id (`int`, *optional*):
The index of the mask token in the vocabulary. This must be included in the config because of the
"mask-dropout" scaling trick, which will scale the inputs depending on the number of masked tokens.
pad_token_id (`int`, *optional*):
The index of the padding token in the vocabulary. This must be included in the config because certain parts
of the ESM code use this instead of the attention mask.
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 1026):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query", "rotary"`.
For positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
[Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
emb_layer_norm_before (`bool`, *optional*):
Whether to apply layer normalization after embeddings but before the main stem of the network.
token_dropout (`bool`, defaults to `False`):
When this is enabled, masked tokens are treated as if they had been dropped out by input dropout.
Examples:
```python
>>> from transformers import EsmModel, EsmConfig
>>> # Initializing a ESM facebook/esm-1b style configuration >>> configuration = EsmConfig()
>>> # Initializing a model from the configuration >>> model = ESMModel(configuration)
>>> # Accessing the model configuration >>> configuration = model.config
```"""
model_type = "esm"
def __init__(
self,
vocab_size=None,
mask_token_id=None,
pad_token_id=None,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=1026,
initializer_range=0.02,
layer_norm_eps=1e-12,
position_embedding_type="absolute",
use_cache=True,
emb_layer_norm_before=None,
token_dropout=False,
is_folding_model=False,
esmfold_config=None,
vocab_list=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, mask_token_id=mask_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
self.emb_layer_norm_before = emb_layer_norm_before
self.token_dropout = token_dropout
self.is_folding_model = is_folding_model
if is_folding_model:
if esmfold_config is None:
logger.info("No esmfold_config supplied for folding model, using default values.")
esmfold_config = EsmFoldConfig()
elif isinstance(esmfold_config, dict):
esmfold_config = EsmFoldConfig(**esmfold_config)
self.esmfold_config = esmfold_config
if vocab_list is None:
logger.warning("No vocab_list supplied for folding model, assuming the ESM-2 vocabulary!")
self.vocab_list = get_default_vocab_list()
else:
self.vocab_list = vocab_list
else:
self.esmfold_config = None
self.vocab_list = None
if self.esmfold_config is not None and getattr(self.esmfold_config, "use_esm_attn_map", False):
raise ValueError("The HuggingFace port of ESMFold does not support use_esm_attn_map at this time!")
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = super().to_dict()
if isinstance(self.esmfold_config, EsmFoldConfig):
output["esmfold_config"] = self.esmfold_config.to_dict()
return output
@dataclass
class EsmFoldConfig:
esm_type: str = None
fp16_esm: bool = True
use_esm_attn_map: bool = False
esm_ablate_pairwise: bool = False
esm_ablate_sequence: bool = False
esm_input_dropout: float = 0
embed_aa: bool = True
bypass_lm: bool = False
lddt_head_hid_dim: int = 128
trunk: "TrunkConfig" = None
def __post_init__(self):
if self.trunk is None:
self.trunk = TrunkConfig()
elif isinstance(self.trunk, dict):
self.trunk = TrunkConfig(**self.trunk)
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = asdict(self)
output["trunk"] = self.trunk.to_dict()
return output
@dataclass
class TrunkConfig:
num_blocks: int = 48
sequence_state_dim: int = 1024
pairwise_state_dim: int = 128
sequence_head_width: int = 32
pairwise_head_width: int = 32
position_bins: int = 32
dropout: float = 0
layer_drop: float = 0
cpu_grad_checkpoint: bool = False
max_recycles: int = 4
chunk_size: Optional[int] = 128
structure_module: "StructureModuleConfig" = None
def __post_init__(self):
if self.structure_module is None:
self.structure_module = StructureModuleConfig()
elif isinstance(self.structure_module, dict):
self.structure_module = StructureModuleConfig(**self.structure_module)
if self.max_recycles <= 0:
raise ValueError(f"`max_recycles` should be positive, got {self.max_recycles}.")
if self.sequence_state_dim % self.sequence_state_dim != 0:
raise ValueError(
"`sequence_state_dim` should be a round multiple of `sequence_state_dim`, got"
f" {self.sequence_state_dim} and {self.sequence_state_dim}."
)
if self.pairwise_state_dim % self.pairwise_state_dim != 0:
raise ValueError(
"`pairwise_state_dim` should be a round multiple of `pairwise_state_dim`, got"
f" {self.pairwise_state_dim} and {self.pairwise_state_dim}."
)
sequence_num_heads = self.sequence_state_dim // self.sequence_head_width
pairwise_num_heads = self.pairwise_state_dim // self.pairwise_head_width
if self.sequence_state_dim != sequence_num_heads * self.sequence_head_width:
raise ValueError(
"`sequence_state_dim` should be equal to `sequence_num_heads * sequence_head_width, got"
f" {self.sequence_state_dim} != {sequence_num_heads} * {self.sequence_head_width}."
)
if self.pairwise_state_dim != pairwise_num_heads * self.pairwise_head_width:
raise ValueError(
"`pairwise_state_dim` should be equal to `pairwise_num_heads * pairwise_head_width, got"
f" {self.pairwise_state_dim} != {pairwise_num_heads} * {self.pairwise_head_width}."
)
if self.pairwise_state_dim % 2 != 0:
raise ValueError(f"`pairwise_state_dim` should be even, got {self.pairwise_state_dim}.")
if self.dropout >= 0.4:
raise ValueError(f"`dropout` should not be greater than 0.4, got {self.dropout}.")
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = asdict(self)
output["structure_module"] = self.structure_module.to_dict()
return output
@dataclass
class StructureModuleConfig:
"""
Args:
sequence_dim:
Single representation channel dimension
pairwise_dim:
Pair representation channel dimension
ipa_dim:
IPA hidden channel dimension
resnet_dim:
Angle resnet (Alg. 23 lines 11-14) hidden channel dimension
num_heads_ipa:
Number of IPA heads
num_qk_points:
Number of query/key points to generate during IPA
num_v_points:
Number of value points to generate during IPA
dropout_rate:
Dropout rate used throughout the layer
num_blocks:
Number of structure module blocks
num_transition_layers:
Number of layers in the single representation transition (Alg. 23 lines 8-9)
num_resnet_blocks:
Number of blocks in the angle resnet
num_angles:
Number of angles to generate in the angle resnet
trans_scale_factor:
Scale of single representation transition hidden dimension
epsilon:
Small number used in angle resnet normalization
inf:
Large number used for attention masking
"""
sequence_dim: int = 384
pairwise_dim: int = 128
ipa_dim: int = 16
resnet_dim: int = 128
num_heads_ipa: int = 12
num_qk_points: int = 4
num_v_points: int = 8
dropout_rate: float = 0.1
num_blocks: int = 8
num_transition_layers: int = 1
num_resnet_blocks: int = 2
num_angles: int = 7
trans_scale_factor: int = 10
epsilon: float = 1e-8
inf: float = 1e5
def to_dict(self):
return asdict(self)
def get_default_vocab_list():
return (
"<cls>",
"<pad>",
"<eos>",
"<unk>",
"L",
"A",
"G",
"V",
"S",
"E",
"R",
"T",
"I",
"D",
"P",
"K",
"Q",
"N",
"F",
"Y",
"M",
"H",
"W",
"C",
"X",
"B",
"U",
"Z",
"O",
".",
"-",
"<null_1>",
"<mask>",
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/convert_esm.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert ESM checkpoint."""
import argparse
import pathlib
from pathlib import Path
from tempfile import TemporaryDirectory
import esm as esm_module
import torch
from esm.esmfold.v1.misc import batch_encode_sequences as esmfold_encode_sequences
from esm.esmfold.v1.pretrained import esmfold_v1
from transformers.models.esm.configuration_esm import EsmConfig, EsmFoldConfig
from transformers.models.esm.modeling_esm import (
EsmForMaskedLM,
EsmForSequenceClassification,
EsmIntermediate,
EsmLayer,
EsmOutput,
EsmSelfAttention,
EsmSelfOutput,
)
from transformers.models.esm.modeling_esmfold import EsmForProteinFolding
from transformers.models.esm.tokenization_esm import EsmTokenizer
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_DATA = [
(
"protein1",
"MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA",
),
("protein2", "MKTVRQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLA"),
("protein3", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLAGG"),
("protein4", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLA"),
]
MODEL_MAPPING = {
"esm1b_t33_650M_UR50S": esm_module.pretrained.esm1b_t33_650M_UR50S,
"esm1v_t33_650M_UR90S_1": esm_module.pretrained.esm1v_t33_650M_UR90S_1,
"esm1v_t33_650M_UR90S_2": esm_module.pretrained.esm1v_t33_650M_UR90S_2,
"esm1v_t33_650M_UR90S_3": esm_module.pretrained.esm1v_t33_650M_UR90S_3,
"esm1v_t33_650M_UR90S_4": esm_module.pretrained.esm1v_t33_650M_UR90S_4,
"esm1v_t33_650M_UR90S_5": esm_module.pretrained.esm1v_t33_650M_UR90S_5,
"esm2_t48_15B_UR50D": esm_module.pretrained.esm2_t48_15B_UR50D,
"esm2_t36_3B_UR50D": esm_module.pretrained.esm2_t36_3B_UR50D,
"esm2_t33_650M_UR50D": esm_module.pretrained.esm2_t33_650M_UR50D,
"esm2_t30_150M_UR50D": esm_module.pretrained.esm2_t30_150M_UR50D,
"esm2_t12_35M_UR50D": esm_module.pretrained.esm2_t12_35M_UR50D,
"esm2_t6_8M_UR50D": esm_module.pretrained.esm2_t6_8M_UR50D,
"esmfold_v1": esmfold_v1,
}
restypes = list("ARNDCQEGHILKMFPSTWYV")
restypes_with_x = restypes + ["X"]
restypes_with_extras = restypes_with_x + ["<pad>", "<mask>", "<cls>", "<sep>", "<eos>"]
def get_esmfold_tokenizer():
with TemporaryDirectory() as tempdir:
vocab = "\n".join(restypes_with_extras)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokenizer.pad_token_id = 0 # Overlaps with 'A' but that seems to be what they want
return hf_tokenizer
def transfer_and_check_weights(original_module, our_module):
status = our_module.load_state_dict(original_module.state_dict())
if status.missing_keys:
raise ValueError(f"Missing keys: {status.missing_keys}")
if status.unexpected_keys:
raise ValueError(f"Unexpected keys: {status.unexpected_keys}")
def convert_esm_checkpoint_to_pytorch(
model: str, pytorch_dump_folder_path: str, classification_head: bool, push_to_repo: str, auth_token: str
):
"""
Copy/paste/tweak esm's weights to our BERT structure.
"""
if model.startswith("esmfold"):
esm = MODEL_MAPPING[model]()
else:
esm, alphabet = MODEL_MAPPING[model]()
esm.eval() # disable dropout
if model.startswith("esmfold"):
embed_dim = esm.esm.embed_dim
num_layers = esm.esm.num_layers
num_attention_heads = esm.esm.attention_heads
intermediate_size = 4 * embed_dim
token_dropout = esm.esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = True
esmfold_config = EsmFoldConfig()
for key, val in esm.cfg.items():
if hasattr(esmfold_config, key) and key != "trunk":
setattr(esmfold_config, key, val)
for key, val in esm.cfg.trunk.items():
if hasattr(esmfold_config.trunk, key) and key != "structure_module":
setattr(esmfold_config.trunk, key, val)
for key, val in esm.cfg.trunk.structure_module.items():
if hasattr(esmfold_config.trunk.structure_module, key):
setattr(esmfold_config.trunk.structure_module, key, val)
elif hasattr(esm, "args"):
# Indicates an ESM-1b or ESM-1v model
embed_dim = esm.args.embed_dim
num_layers = esm.args.layers
num_attention_heads = esm.args.attention_heads
intermediate_size = esm.args.ffn_embed_dim
token_dropout = esm.args.token_dropout
emb_layer_norm_before = True if esm.emb_layer_norm_before else False
position_embedding_type = "absolute"
is_folding_model = False
esmfold_config = None
else:
# Indicates an ESM-2 model
embed_dim = esm.embed_dim
num_layers = esm.num_layers
num_attention_heads = esm.attention_heads
intermediate_size = 4 * embed_dim # This is hardcoded in ESM-2
token_dropout = esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = False
esmfold_config = None
if is_folding_model:
alphabet = esm.esm.alphabet
vocab_list = tuple(alphabet.all_toks)
mask_token_id = alphabet.mask_idx
pad_token_id = alphabet.padding_idx
if is_folding_model:
original_esm_model = esm.esm
else:
original_esm_model = esm
config = EsmConfig(
vocab_size=original_esm_model.embed_tokens.num_embeddings,
mask_token_id=mask_token_id,
hidden_size=embed_dim,
num_hidden_layers=num_layers,
num_attention_heads=num_attention_heads,
intermediate_size=intermediate_size,
max_position_embeddings=1026,
layer_norm_eps=1e-5, # PyTorch default used in fairseq
attention_probs_dropout_prob=0.0,
hidden_dropout_prob=0.0,
pad_token_id=pad_token_id,
emb_layer_norm_before=emb_layer_norm_before,
token_dropout=token_dropout,
position_embedding_type=position_embedding_type,
is_folding_model=is_folding_model,
esmfold_config=esmfold_config,
vocab_list=vocab_list,
)
if classification_head:
config.num_labels = esm.classification_heads["mnli"].out_proj.weight.shape[0]
print("Our ESM config:", config)
if model.startswith("esmfold"):
model_class = EsmForProteinFolding
elif classification_head:
model_class = EsmForSequenceClassification
else:
model_class = EsmForMaskedLM
model = model_class(config)
model.eval()
# Now let's copy all the weights.
# Embeddings
model.esm.embeddings.word_embeddings.weight = original_esm_model.embed_tokens.weight
if position_embedding_type == "absolute":
model.esm.embeddings.position_embeddings.weight = original_esm_model.embed_positions.weight
if config.emb_layer_norm_before:
model.esm.embeddings.layer_norm.weight = original_esm_model.emb_layer_norm_before.weight
model.esm.embeddings.layer_norm.bias = original_esm_model.emb_layer_norm_before.bias
model.esm.encoder.emb_layer_norm_after.weight = original_esm_model.emb_layer_norm_after.weight
model.esm.encoder.emb_layer_norm_after.bias = original_esm_model.emb_layer_norm_after.bias
for i in range(config.num_hidden_layers):
# Encoder: start of layer
layer: EsmLayer = model.esm.encoder.layer[i]
# esm_layer: TransformerSentenceEncoderLayer = original_esm_model.layers[i]
esm_layer = original_esm_model.layers[i]
# self attention
self_attn: EsmSelfAttention = layer.attention.self
assert (
esm_layer.self_attn.k_proj.weight.data.shape
== esm_layer.self_attn.q_proj.weight.data.shape
== esm_layer.self_attn.v_proj.weight.data.shape
== torch.Size((config.hidden_size, config.hidden_size))
)
self_attn.query.weight.data = esm_layer.self_attn.q_proj.weight
self_attn.query.bias.data = esm_layer.self_attn.q_proj.bias
self_attn.key.weight.data = esm_layer.self_attn.k_proj.weight
self_attn.key.bias.data = esm_layer.self_attn.k_proj.bias
self_attn.value.weight.data = esm_layer.self_attn.v_proj.weight
self_attn.value.bias.data = esm_layer.self_attn.v_proj.bias
if getattr(esm_layer.self_attn, "rot_emb", None) is not None:
# Matt: Although inv_freq is not a trainable weight, it is computed at model init and cached.
# During the training of ESM-2 the model was converted to float16 precision, which also converts
# the inv_freq tensor, and the loss of precision remains even if the model is loaded later as float32.
# If we recompute inv_freq without this loss of precision then we will get subtly different rotary
# embeddings, which are enough to cause significant discrepancies in model outputs. To avoid this,
# we make sure the new model copies the data from the old inv_freq.
self_attn.rotary_embeddings.inv_freq.data = esm_layer.self_attn.rot_emb.inv_freq
# LayerNorm changes for pre-activation
layer.attention.LayerNorm.weight = esm_layer.self_attn_layer_norm.weight
layer.attention.LayerNorm.bias = esm_layer.self_attn_layer_norm.bias
layer.LayerNorm.weight = esm_layer.final_layer_norm.weight
layer.LayerNorm.bias = esm_layer.final_layer_norm.bias
# self-attention output
self_output: EsmSelfOutput = layer.attention.output
assert self_output.dense.weight.shape == esm_layer.self_attn.out_proj.weight.shape
self_output.dense.weight = esm_layer.self_attn.out_proj.weight
self_output.dense.bias = esm_layer.self_attn.out_proj.bias
# intermediate
intermediate: EsmIntermediate = layer.intermediate
assert intermediate.dense.weight.shape == esm_layer.fc1.weight.shape
intermediate.dense.weight = esm_layer.fc1.weight
intermediate.dense.bias = esm_layer.fc1.bias
# output
bert_output: EsmOutput = layer.output
assert bert_output.dense.weight.shape == esm_layer.fc2.weight.shape
bert_output.dense.weight = esm_layer.fc2.weight
bert_output.dense.bias = esm_layer.fc2.bias
# end of layer
if is_folding_model:
model.esm_s_combine.data = esm.esm_s_combine.data
model.af2_to_esm.data = esm.af2_to_esm.data
transfer_and_check_weights(esm.embedding, model.embedding)
transfer_and_check_weights(esm.esm_s_mlp, model.esm_s_mlp)
transfer_and_check_weights(esm.trunk, model.trunk)
transfer_and_check_weights(esm.distogram_head, model.distogram_head)
transfer_and_check_weights(esm.ptm_head, model.ptm_head)
transfer_and_check_weights(esm.lm_head, model.lm_head)
transfer_and_check_weights(esm.lddt_head, model.lddt_head)
elif classification_head:
model.classifier.dense.weight = esm.esm.classification_heads["mnli"].dense.weight
model.classifier.dense.bias = esm.classification_heads["mnli"].dense.bias
model.classifier.out_proj.weight = esm.classification_heads["mnli"].out_proj.weight
model.classifier.out_proj.bias = esm.classification_heads["mnli"].out_proj.bias
else:
# LM Head
model.lm_head.dense.weight = esm.lm_head.dense.weight
model.lm_head.dense.bias = esm.lm_head.dense.bias
model.lm_head.layer_norm.weight = esm.lm_head.layer_norm.weight
model.lm_head.layer_norm.bias = esm.lm_head.layer_norm.bias
model.lm_head.decoder.weight = esm.lm_head.weight
model.lm_head.bias = esm.lm_head.bias
# Contact prediction head
transfer_and_check_weights(esm.contact_head, model.esm.contact_head)
# Prepare data (first 2 sequences from ESMStructuralSplitDataset superfamily / 4)
if is_folding_model:
# Folding models aren't trained on masked inputs and don't like mask tokens.
sample_data = SAMPLE_DATA[:2]
else:
sample_data = SAMPLE_DATA
if is_folding_model:
hf_tokenizer = get_esmfold_tokenizer()
hf_tokens = hf_tokenizer(
[row[1] for row in sample_data], return_tensors="pt", padding=True, add_special_tokens=False
)
esmfold_aas, esmfold_mask, _, _, _ = esmfold_encode_sequences([row[1] for row in sample_data])
success = torch.all(hf_tokens["input_ids"] == esmfold_aas) and torch.all(
hf_tokens["attention_mask"] == esmfold_mask
)
else:
# Let's check that we get the same results.
batch_converter = alphabet.get_batch_converter()
batch_labels, batch_strs, batch_tokens = batch_converter(sample_data)
# Prepare tokenizer and make sure it matches
with TemporaryDirectory() as tempdir:
vocab = "\n".join(alphabet.all_toks)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokens = hf_tokenizer([row[1] for row in sample_data], return_tensors="pt", padding=True)
success = torch.all(hf_tokens["input_ids"] == batch_tokens)
print("Do both models tokenizers output the same tokens?", "🔥" if success else "💩")
if not success:
raise Exception("Tokenization does not match!")
with torch.no_grad():
if is_folding_model:
# Let's test the model in parts
# ESMFold always converts the ESM stem to float16, which requires float16 ops
# that don't exist on CPU. Therefore, to test it we need to run it on GPU. However,
# ESMFold is what we in the community call a "big boy" and so we desperately avoid putting both the
# original and the converted model on the GPU at the same time.
their_output = esm.cuda().infer([row[1] for row in sample_data])
our_output = model.cuda()(
input_ids=hf_tokens["input_ids"].cuda(), attention_mask=hf_tokens["attention_mask"].cuda()
)
else:
our_output = model(**hf_tokens, output_hidden_states=True)
our_output = our_output["logits"]
if classification_head:
their_output = esm.model.classification_heads["mnli"](esm.extract_features(batch_tokens))
else:
their_output = esm(hf_tokens["input_ids"], repr_layers=list(range(999)))
their_output = their_output["logits"]
if is_folding_model:
max_absolute_diff = torch.max(torch.abs(our_output["positions"] - their_output["positions"])).item()
success = torch.allclose(our_output["positions"], their_output["positions"], atol=1e-5)
else:
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
if not is_folding_model:
# Let's check contact prediction too
our_output = model.predict_contacts(hf_tokens["input_ids"], hf_tokens["attention_mask"])
their_output = esm.predict_contacts(hf_tokens["input_ids"])
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print("Contact prediction testing:")
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
pathlib.Path(pytorch_dump_folder_path).mkdir(parents=True, exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
del esm # Free up some memory before continuing
print(f"Saving tokenizer to {pytorch_dump_folder_path}")
hf_tokenizer.save_pretrained(pytorch_dump_folder_path)
if push_to_repo:
model.push_to_hub(repo_id=push_to_repo, token_token=auth_token)
hf_tokenizer.push_to_hub(repo_id=push_to_repo, token_token=auth_token)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--pytorch_dump_folder_path", type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--classification_head", action="store_true", help="Whether to convert a final classification head."
)
parser.add_argument("--model", default=None, type=str, required=True, help="Name of model to convert.")
parser.add_argument("--push_to_repo", type=str, help="Repo to upload to (including username!).")
parser.add_argument("--auth_token", type=str, help="HuggingFace auth token.")
args = parser.parse_args()
convert_esm_checkpoint_to_pytorch(
args.model, args.pytorch_dump_folder_path, args.classification_head, args.push_to_repo, args.auth_token
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/__init__.py | # Copyright 2022 Facebook and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_esm": ["ESM_PRETRAINED_CONFIG_ARCHIVE_MAP", "EsmConfig"],
"tokenization_esm": ["EsmTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_esm"] = [
"ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"EsmForMaskedLM",
"EsmForSequenceClassification",
"EsmForTokenClassification",
"EsmModel",
"EsmPreTrainedModel",
]
_import_structure["modeling_esmfold"] = ["EsmForProteinFolding", "EsmFoldPreTrainedModel"]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_esm"] = [
"TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFEsmForMaskedLM",
"TFEsmForSequenceClassification",
"TFEsmForTokenClassification",
"TFEsmModel",
"TFEsmPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_esm import ESM_PRETRAINED_CONFIG_ARCHIVE_MAP, EsmConfig
from .tokenization_esm import EsmTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_esm import (
ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
EsmForMaskedLM,
EsmForSequenceClassification,
EsmForTokenClassification,
EsmModel,
EsmPreTrainedModel,
)
from .modeling_esmfold import EsmFoldPreTrainedModel, EsmForProteinFolding
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_esm import (
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
TFEsmForMaskedLM,
TFEsmForSequenceClassification,
TFEsmForTokenClassification,
TFEsmModel,
TFEsmPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/tokenization_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for ESM."""
import os
from typing import List, Optional, Union
from ...tokenization_utils import PreTrainedTokenizer
from ...tokenization_utils_base import AddedToken
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"facebook/esm2_t6_8M_UR50D": "https://huggingface.co/facebook/esm2_t6_8M_UR50D/resolve/main/vocab.txt",
"facebook/esm2_t12_35M_UR50D": "https://huggingface.co/facebook/esm2_t12_35M_UR50D/resolve/main/vocab.txt",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"facebook/esm2_t6_8M_UR50D": 1024,
"facebook/esm2_t12_35M_UR50D": 1024,
}
def load_vocab_file(vocab_file):
with open(vocab_file, "r") as f:
lines = f.read().splitlines()
return [l.strip() for l in lines]
class EsmTokenizer(PreTrainedTokenizer):
"""
Constructs an ESM tokenizer.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
unk_token="<unk>",
cls_token="<cls>",
pad_token="<pad>",
mask_token="<mask>",
eos_token="<eos>",
**kwargs,
):
self.all_tokens = load_vocab_file(vocab_file)
self._id_to_token = dict(enumerate(self.all_tokens))
self._token_to_id = {tok: ind for ind, tok in enumerate(self.all_tokens)}
super().__init__(
unk_token=unk_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
eos_token=eos_token,
**kwargs,
)
# TODO, all the tokens are added? But they are also part of the vocab... bit strange.
# none of them are special, but they all need special splitting.
self.unique_no_split_tokens = self.all_tokens
self._update_trie(self.unique_no_split_tokens)
def _convert_id_to_token(self, index: int) -> str:
return self._id_to_token.get(index, self.unk_token)
def _convert_token_to_id(self, token: str) -> int:
return self._token_to_id.get(token, self._token_to_id.get(self.unk_token))
def _tokenize(self, text, **kwargs):
return text.split()
def get_vocab_size(self, with_added_tokens=False):
return len(self._id_to_token)
def get_vocab(self):
return {token: i for i, token in enumerate(self.all_tokens)}
def token_to_id(self, token: str) -> int:
return self._token_to_id.get(token, self._token_to_id.get(self.unk_token))
def id_to_token(self, index: int) -> str:
return self._id_to_token.get(index, self.unk_token)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
cls = [self.cls_token_id]
sep = [self.eos_token_id] # No sep token in ESM vocabulary
if token_ids_1 is None:
if self.eos_token_id is None:
return cls + token_ids_0
else:
return cls + token_ids_0 + sep
elif self.eos_token_id is None:
raise ValueError("Cannot tokenize multiple sequences when EOS token is not set!")
return cls + token_ids_0 + sep + token_ids_1 + sep # Multiple inputs always have an EOS token
def get_special_tokens_mask(
self, token_ids_0: List, token_ids_1: Optional[List] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieves sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` or `encode_plus` methods.
Args:
token_ids_0 (`List[int]`):
List of ids of the first sequence.
token_ids_1 (`List[int]`, *optional*):
List of ids of the second sequence.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
if token_ids_1 is not None:
raise ValueError(
"You should not supply a second sequence if the provided sequence of "
"ids is already formatted with special tokens for the model."
)
return [1 if token in self.all_special_ids else 0 for token in token_ids_0]
mask = [1] + ([0] * len(token_ids_0)) + [1]
if token_ids_1 is not None:
mask += [0] * len(token_ids_1) + [1]
return mask
def save_vocabulary(self, save_directory, filename_prefix):
vocab_file = os.path.join(save_directory, (filename_prefix + "-" if filename_prefix else "") + "vocab.txt")
with open(vocab_file, "w") as f:
f.write("\n".join(self.all_tokens))
return (vocab_file,)
@property
def vocab_size(self) -> int:
return self.get_vocab_size(with_added_tokens=False)
def _add_tokens(self, new_tokens: Union[List[str], List[AddedToken]], special_tokens: bool = False) -> int:
return super()._add_tokens(new_tokens, special_tokens=True)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/modeling_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
import math
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
MaskedLMOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = x.chunk(2, dim=-1)
return torch.cat((-x2, x1), dim=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : x.shape[-2], :]
sin = sin[:, :, : x.shape[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def gelu(x):
"""
This is the gelu implementation from the original ESM repo. Using F.gelu yields subtly wrong results.
"""
return x * 0.5 * (1.0 + torch.erf(x / math.sqrt(2.0)))
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + x.transpose(-1, -2)
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = x.sum(-1, keepdims=True)
a2 = x.sum(-2, keepdims=True)
a12 = x.sum((-1, -2), keepdims=True)
avg = a1 * a2
avg.div_(a12) # in-place to reduce memory
normalized = x - avg
return normalized
class RotaryEmbedding(torch.nn.Module):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int):
super().__init__()
# Generate and save the inverse frequency buffer (non trainable)
inv_freq = 1.0 / (10000 ** (torch.arange(0, dim, 2).float() / dim))
inv_freq = inv_freq
self.register_buffer("inv_freq", inv_freq)
self._seq_len_cached = None
self._cos_cached = None
self._sin_cached = None
def _update_cos_sin_tables(self, x, seq_dimension=2):
seq_len = x.shape[seq_dimension]
# Reset the tables if the sequence length has changed,
# or if we're on a new device (possibly due to tracing for instance)
if seq_len != self._seq_len_cached or self._cos_cached.device != x.device:
self._seq_len_cached = seq_len
t = torch.arange(x.shape[seq_dimension], device=x.device).type_as(self.inv_freq)
freqs = torch.outer(t, self.inv_freq)
emb = torch.cat((freqs, freqs), dim=-1).to(x.device)
self._cos_cached = emb.cos()[None, None, :, :]
self._sin_cached = emb.sin()[None, None, :, :]
return self._cos_cached, self._sin_cached
def forward(self, q: torch.Tensor, k: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
self._cos_cached, self._sin_cached = self._update_cos_sin_tables(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, self._cos_cached, self._sin_cached),
apply_rotary_pos_emb(k, self._cos_cached, self._sin_cached),
)
class EsmContactPredictionHead(nn.Module):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
):
super().__init__()
self.in_features = in_features
self.eos_idx = eos_idx
self.regression = nn.Linear(in_features, 1, bias)
self.activation = nn.Sigmoid()
def forward(self, tokens, attentions):
# remove eos token attentions
eos_mask = tokens.ne(self.eos_idx).to(attentions)
eos_mask = eos_mask.unsqueeze(1) * eos_mask.unsqueeze(2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = attentions.size()
attentions = attentions.view(batch_size, layers * heads, seqlen, seqlen)
# features: batch x channels x tokens x tokens (symmetric)
attentions = attentions.to(
self.regression.weight.device
) # attentions always float32, may need to convert to float16
attentions = average_product_correct(symmetrize(attentions))
attentions = attentions.permute(0, 2, 3, 1)
return self.activation(self.regression(attentions).squeeze(3))
class EsmEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
if config.emb_layer_norm_before:
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
else:
self.layer_norm = None
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
def forward(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings = embeddings.masked_fill((input_ids == self.mask_token_id).unsqueeze(-1), 0.0)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = attention_mask.sum(-1)
mask_ratio_observed = (input_ids == self.mask_token_id).sum(-1).float() / src_lengths
embeddings = (embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]).to(
embeddings.dtype
)
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings = embeddings + position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = (embeddings * attention_mask.unsqueeze(-1)).to(embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
class EsmSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = RotaryEmbedding(dim=self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class EsmSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
class EsmAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = EsmSelfAttention(config)
self.output = EsmSelfOutput(config)
self.pruned_heads = set()
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class EsmIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = gelu(hidden_states)
return hidden_states
class EsmOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
class EsmLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = EsmAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = EsmAttention(config)
self.intermediate = EsmIntermediate(config)
self.output = EsmOutput(config)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = self.feed_forward_chunk(attention_output)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
attention_output_ln = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(attention_output_ln)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class EsmEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([EsmLayer(config) for _ in range(config.num_hidden_layers)])
self.emb_layer_norm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with `config.gradient_checkpointing=True`. Setting "
"`use_cache=False`..."
)
use_cache = False
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache = next_decoder_cache + (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPooler
class EsmPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class EsmPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
supports_gradient_checkpointing = True
_no_split_modules = ["EsmLayer", "EsmFoldTriangularSelfAttentionBlock", "EsmEmbeddings"]
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
ESM_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class EsmModel(EsmPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = EsmEmbeddings(config)
self.encoder = EsmEncoder(config)
self.pooler = EsmPooler(config) if add_pooling_layer else None
self.contact_head = EsmContactPredictionHead(
in_features=config.num_hidden_layers * config.num_attention_heads, bias=True
)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("(batch_size, sequence_length)"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = torch.stack(attns, dim=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(3)
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(4)
return self.contact_head(tokens, attns)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class EsmForMaskedLM(EsmPreTrainedModel):
_tied_weights_keys = ["lm_head.decoder.weight"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = EsmModel(config, add_pooling_layer=False)
self.lm_head = EsmLMHead(config)
self.init_weights()
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
labels = labels.to(prediction_scores.device)
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask=attention_mask)
class EsmLMHead(nn.Module):
"""ESM Head for masked language modeling."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
def forward(self, features, **kwargs):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
x = self.decoder(x) + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForSequenceClassification(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = EsmModel(config, add_pooling_layer=False)
self.classifier = EsmClassificationHead(config)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
labels = labels.to(logits.device)
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForTokenClassification(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = EsmModel(config, add_pooling_layer=False)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
labels = labels.to(logits.device)
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class EsmClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = torch.tanh(x)
x = self.dropout(x)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/esm/modeling_esmfold.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import math
import sys
from dataclasses import dataclass
from functools import partial
from typing import Callable, Dict, List, Optional, Sequence, Tuple, Union
import numpy as np
import torch
import torch.nn as nn
from torch.nn import LayerNorm
from ...integrations.deepspeed import is_deepspeed_available
from ...modeling_outputs import ModelOutput
from ...utils import (
ContextManagers,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_scipy_available,
logging,
replace_return_docstrings,
)
from .configuration_esm import EsmConfig
from .modeling_esm import ESM_START_DOCSTRING, EsmModel, EsmPreTrainedModel
from .openfold_utils import (
OFProtein,
Rigid,
Rotation,
atom14_to_atom37,
chunk_layer,
compute_predicted_aligned_error,
compute_tm,
frames_and_literature_positions_to_atom14_pos,
make_atom14_masks,
residue_constants,
to_pdb,
torsion_angles_to_frames,
)
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esmfold_v1"
_CONFIG_FOR_DOC = "EsmConfig"
@dataclass
class EsmForProteinFoldingOutput(ModelOutput):
"""
Output type of [`EsmForProteinFoldingOutput`].
Args:
frames (`torch.FloatTensor`):
Output frames.
sidechain_frames (`torch.FloatTensor`):
Output sidechain frames.
unnormalized_angles (`torch.FloatTensor`):
Predicted unnormalized backbone and side chain torsion angles.
angles (`torch.FloatTensor`):
Predicted backbone and side chain torsion angles.
positions (`torch.FloatTensor`):
Predicted positions of the backbone and side chain atoms.
states (`torch.FloatTensor`):
Hidden states from the protein folding trunk.
s_s (`torch.FloatTensor`):
Per-residue embeddings derived by concatenating the hidden states of each layer of the ESM-2 LM stem.
s_z (`torch.FloatTensor`):
Pairwise residue embeddings.
distogram_logits (`torch.FloatTensor`):
Input logits to the distogram used to compute residue distances.
lm_logits (`torch.FloatTensor`):
Logits output by the ESM-2 protein language model stem.
aatype (`torch.FloatTensor`):
Input amino acids (AlphaFold2 indices).
atom14_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom14 representation.
residx_atom14_to_atom37 (`torch.FloatTensor`):
Mapping between atoms in the atom14 and atom37 representations.
residx_atom37_to_atom14 (`torch.FloatTensor`):
Mapping between atoms in the atom37 and atom14 representations.
atom37_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom37 representation.
residue_index (`torch.FloatTensor`):
The index of each residue in the protein chain. Unless internal padding tokens are used, this will just be
a sequence of integers from 0 to `sequence_length`.
lddt_head (`torch.FloatTensor`):
Raw outputs from the lddt head used to compute plddt.
plddt (`torch.FloatTensor`):
Per-residue confidence scores. Regions of low confidence may indicate areas where the model's prediction is
uncertain, or where the protein structure is disordered.
ptm_logits (`torch.FloatTensor`):
Raw logits used for computing ptm.
ptm (`torch.FloatTensor`):
TM-score output representing the model's high-level confidence in the overall structure.
aligned_confidence_probs (`torch.FloatTensor`):
Per-residue confidence scores for the aligned structure.
predicted_aligned_error (`torch.FloatTensor`):
Predicted error between the model's prediction and the ground truth.
max_predicted_aligned_error (`torch.FloatTensor`):
Per-sample maximum predicted error.
"""
frames: torch.FloatTensor = None
sidechain_frames: torch.FloatTensor = None
unnormalized_angles: torch.FloatTensor = None
angles: torch.FloatTensor = None
positions: torch.FloatTensor = None
states: torch.FloatTensor = None
s_s: torch.FloatTensor = None
s_z: torch.FloatTensor = None
distogram_logits: torch.FloatTensor = None
lm_logits: torch.FloatTensor = None
aatype: torch.FloatTensor = None
atom14_atom_exists: torch.FloatTensor = None
residx_atom14_to_atom37: torch.FloatTensor = None
residx_atom37_to_atom14: torch.FloatTensor = None
atom37_atom_exists: torch.FloatTensor = None
residue_index: torch.FloatTensor = None
lddt_head: torch.FloatTensor = None
plddt: torch.FloatTensor = None
ptm_logits: torch.FloatTensor = None
ptm: torch.FloatTensor = None
aligned_confidence_probs: torch.FloatTensor = None
predicted_aligned_error: torch.FloatTensor = None
max_predicted_aligned_error: torch.FloatTensor = None
ESMFOLD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
masking_pattern (`torch.LongTensor` of shape `({0})`, *optional*):
Locations of tokens to mask during training as a form of regularization. Mask values selected in `[0, 1]`.
num_recycles (`int`, *optional*, defaults to `None`):
Number of times to recycle the input sequence. If `None`, defaults to `config.num_recycles`. "Recycling"
consists of passing the output of the folding trunk back in as input to the trunk. During training, the
number of recycles should vary with each batch, to ensure that the model learns to output valid predictions
after each recycle. During inference, num_recycles should be set to the highest value that the model was
trained with for maximum accuracy. Accordingly, when this value is set to `None`, config.max_recycles is
used.
"""
def is_fp16_enabled():
# Autocast world
fp16_enabled = torch.get_autocast_gpu_dtype() == torch.float16
fp16_enabled = fp16_enabled and torch.is_autocast_enabled()
return fp16_enabled
def is_deepspeed_initialized():
if is_deepspeed_available():
return False
else:
try:
import deepspeed
# This is not available in all DeepSpeed versions.
return deepspeed.utils.is_initialized()
except Exception:
return False
def collate_dense_tensors(samples: List[torch.Tensor], pad_v: float = 0) -> torch.Tensor:
"""
Takes a list of tensors with the following dimensions:
[(d_11, ..., d_1K),
(d_21, ..., d_2K), ..., (d_N1, ..., d_NK)]
and stack + pads them into a single tensor of:
(N, max_i=1,N { d_i1 }, ..., max_i=1,N {diK})
"""
if len(samples) == 0:
return torch.Tensor()
if len({x.dim() for x in samples}) != 1:
raise RuntimeError(f"Samples has varying dimensions: {[x.dim() for x in samples]}")
(device,) = tuple({x.device for x in samples}) # assumes all on same device
max_shape = [max(lst) for lst in zip(*[x.shape for x in samples])]
result = torch.empty(len(samples), *max_shape, dtype=samples[0].dtype, device=device)
result.fill_(pad_v)
for i in range(len(samples)):
result_i = result[i]
t = samples[i]
result_i[tuple(slice(0, k) for k in t.shape)] = t
return result
def flatten_final_dims(t: torch.Tensor, no_dims: int):
return t.reshape(t.shape[:-no_dims] + (-1,))
def permute_final_dims(tensor: torch.Tensor, inds: List[int]):
zero_index = -1 * len(inds)
first_inds = list(range(len(tensor.shape[:zero_index])))
return tensor.permute(first_inds + [zero_index + i for i in inds])
def dict_multimap(fn, dicts):
first = dicts[0]
new_dict = {}
for k, v in first.items():
all_v = [d[k] for d in dicts]
if isinstance(v, dict):
new_dict[k] = dict_multimap(fn, all_v)
else:
new_dict[k] = fn(all_v)
return new_dict
def trunc_normal_init_(weights, scale=1.0, fan="fan_in"):
shape = weights.shape
scale = scale / max(1, shape[1])
if not is_scipy_available():
logger.warning(
"This init requires scipy, but scipy was not found, default to an approximation that might not be"
" equivalent."
)
std = math.sqrt(scale)
torch.nn.init.normal_(weights, std=std).clamp(min=0.0, max=2.0 * std)
else:
from scipy.stats import truncnorm
std = math.sqrt(scale) / truncnorm.std(a=-2, b=2, loc=0, scale=1)
samples = truncnorm.rvs(a=-2, b=2, loc=0, scale=std, size=weights.numel())
samples = np.reshape(samples, shape)
weights.copy_(torch.tensor(samples, device=weights.device))
def ipa_point_weights_init_(weights):
with torch.no_grad():
softplus_inverse_1 = 0.541324854612918
weights.fill_(softplus_inverse_1)
class EsmFoldLinear(nn.Linear):
"""
A Linear layer with built-in nonstandard initializations. Called just like torch.nn.Linear.
Implements the initializers in 1.11.4, plus some additional ones found in the code.
"""
def __init__(
self,
in_dim: int,
out_dim: int,
bias: bool = True,
init: str = "default",
init_fn: Optional[Callable[[torch.Tensor, torch.Tensor], None]] = None,
):
"""
Args:
in_dim:
The final dimension of inputs to the layer
out_dim:
The final dimension of layer outputs
bias:
Whether to learn an additive bias. True by default
init:
The initializer to use. Choose from:
"default": LeCun fan-in truncated normal initialization "relu": He initialization w/ truncated normal
distribution "glorot": Fan-average Glorot uniform initialization "gating": Weights=0, Bias=1 "normal":
Normal initialization with std=1/sqrt(fan_in) "final": Weights=0, Bias=0
Overridden by init_fn if the latter is not None.
init_fn:
A custom initializer taking weight and bias as inputs. Overrides init if not None.
"""
super().__init__(in_dim, out_dim, bias=bias)
if bias:
with torch.no_grad():
self.bias.fill_(0)
self.init = init
self.init_fn = init_fn
if init not in ["default", "relu", "glorot", "gating", "normal", "final"]:
raise ValueError("Invalid init string.")
class EsmFoldLayerNorm(nn.Module):
def __init__(self, c_in, eps=1e-5):
super().__init__()
self.c_in = (c_in,)
self.eps = eps
self.weight = nn.Parameter(torch.ones(c_in))
self.bias = nn.Parameter(torch.zeros(c_in))
def forward(self, x):
d = x.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
out = nn.functional.layer_norm(x, self.c_in, self.weight.to(dtype=d), self.bias.to(dtype=d), self.eps)
else:
out = nn.functional.layer_norm(x, self.c_in, self.weight, self.bias, self.eps)
return out
@torch.jit.ignore
def softmax_no_cast(t: torch.Tensor, dim: int = -1) -> torch.Tensor:
"""
Softmax, but without automatic casting to fp32 when the input is of type bfloat16
"""
d = t.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
s = torch.nn.functional.softmax(t, dim=dim)
else:
s = torch.nn.functional.softmax(t, dim=dim)
return s
class EsmFoldAttention(nn.Module):
"""
Standard multi-head attention using AlphaFold's default layer initialization. Allows multiple bias vectors.
"""
def __init__(
self,
c_q: int,
c_k: int,
c_v: int,
c_hidden: int,
no_heads: int,
gating: bool = True,
):
"""
Args:
c_q:
Input dimension of query data
c_k:
Input dimension of key data
c_v:
Input dimension of value data
c_hidden:
Per-head hidden dimension
no_heads:
Number of attention heads
gating:
Whether the output should be gated using query data
"""
super().__init__()
self.c_q = c_q
self.c_k = c_k
self.c_v = c_v
self.c_hidden = c_hidden
self.no_heads = no_heads
self.gating = gating
# DISCREPANCY: c_hidden is not the per-head channel dimension, as
# stated in the supplement, but the overall channel dimension.
self.linear_q = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_k = EsmFoldLinear(self.c_k, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_v = EsmFoldLinear(self.c_v, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_o = EsmFoldLinear(self.c_hidden * self.no_heads, self.c_q, init="final")
self.linear_g = None
if self.gating:
self.linear_g = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, init="gating")
self.sigmoid = nn.Sigmoid()
def _prep_qkv(self, q_x: torch.Tensor, kv_x: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
# [*, Q/K/V, H * C_hidden]
q = self.linear_q(q_x)
k = self.linear_k(kv_x)
v = self.linear_v(kv_x)
# [*, Q/K, H, C_hidden]
q = q.view(q.shape[:-1] + (self.no_heads, -1))
k = k.view(k.shape[:-1] + (self.no_heads, -1))
v = v.view(v.shape[:-1] + (self.no_heads, -1))
# [*, H, Q/K, C_hidden]
q = q.transpose(-2, -3)
k = k.transpose(-2, -3)
v = v.transpose(-2, -3)
q /= math.sqrt(self.c_hidden)
return q, k, v
def _wrap_up(self, o: torch.Tensor, q_x: torch.Tensor) -> torch.Tensor:
if self.linear_g is not None:
g = self.sigmoid(self.linear_g(q_x))
# [*, Q, H, C_hidden]
g = g.view(g.shape[:-1] + (self.no_heads, -1))
o = o * g
# [*, Q, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, Q, C_q]
o = self.linear_o(o)
return o
def forward(
self,
q_x: torch.Tensor,
kv_x: torch.Tensor,
biases: Optional[List[torch.Tensor]] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
lma_q_chunk_size: int = 1024,
lma_kv_chunk_size: int = 4096,
use_flash: bool = False,
flash_mask: Optional[torch.Tensor] = None,
) -> torch.Tensor:
"""
Args:
q_x:
[*, Q, C_q] query data
kv_x:
[*, K, C_k] key data
biases:
List of biases that broadcast to [*, H, Q, K]
use_memory_efficient_kernel:
Whether to use a custom memory-efficient attention kernel. This should be the default choice for most.
If none of the "use_<...>" flags are True, a stock PyTorch implementation is used instead
use_lma:
Whether to use low-memory attention (Staats & Rabe 2021). If none of the "use_<...>" flags are True, a
stock PyTorch implementation is used instead
lma_q_chunk_size:
Query chunk size (for LMA)
lma_kv_chunk_size:
Key/Value chunk size (for LMA)
Returns
[*, Q, C_q] attention update
"""
if use_lma and (lma_q_chunk_size is None or lma_kv_chunk_size is None):
raise ValueError("If use_lma is specified, lma_q_chunk_size and lma_kv_chunk_size must be provided")
if use_flash and biases is not None:
raise ValueError("use_flash is incompatible with the bias option. For masking, use flash_mask instead")
attn_options = [use_memory_efficient_kernel, use_lma, use_flash]
if sum(attn_options) > 1:
raise ValueError("Choose at most one alternative attention algorithm")
if biases is None:
biases = []
# [*, H, Q/K, C_hidden]
query, key, value = self._prep_qkv(q_x, kv_x)
key = permute_final_dims(key, (1, 0))
# [*, H, Q, K]
output = torch.matmul(query, key)
for b in biases:
output += b
output = softmax_no_cast(output, -1)
# [*, H, Q, C_hidden]
output = torch.matmul(output, value)
output = output.transpose(-2, -3)
output = self._wrap_up(output, q_x)
return output
class EsmFoldTriangleAttention(nn.Module):
def __init__(self, c_in, c_hidden, no_heads, starting=True, inf=1e9):
"""
Args:
c_in:
Input channel dimension
c_hidden:
Overall hidden channel dimension (not per-head)
no_heads:
Number of attention heads
"""
super().__init__()
self.c_in = c_in
self.c_hidden = c_hidden
self.no_heads = no_heads
self.starting = starting
self.inf = inf
self.layer_norm = LayerNorm(self.c_in)
self.linear = EsmFoldLinear(c_in, self.no_heads, bias=False, init="normal")
self.mha = EsmFoldAttention(self.c_in, self.c_in, self.c_in, self.c_hidden, self.no_heads)
@torch.jit.ignore
def _chunk(
self,
x: torch.Tensor,
biases: List[torch.Tensor],
chunk_size: int,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"triangle! triangle!"
mha_inputs = {
"q_x": x,
"kv_x": x,
"biases": biases,
}
return chunk_layer(
partial(self.mha, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma),
mha_inputs,
chunk_size=chunk_size,
no_batch_dims=len(x.shape[:-2]),
_out=x if inplace_safe else None,
)
def forward(
self,
x: torch.Tensor,
mask: Optional[torch.Tensor] = None,
chunk_size: Optional[int] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"""
Args:
x:
[*, I, J, C_in] input tensor (e.g. the pair representation)
Returns:
[*, I, J, C_in] output tensor
"""
if mask is None:
# [*, I, J]
mask = x.new_ones(
x.shape[:-1],
)
if not self.starting:
x = x.transpose(-2, -3)
mask = mask.transpose(-1, -2)
# [*, I, J, C_in]
x = self.layer_norm(x)
# [*, I, 1, 1, J]
mask_bias = (self.inf * (mask - 1))[..., :, None, None, :]
# [*, H, I, J]
triangle_bias = permute_final_dims(self.linear(x), (2, 0, 1))
# [*, 1, H, I, J]
triangle_bias = triangle_bias.unsqueeze(-4)
biases = [mask_bias, triangle_bias]
if chunk_size is not None:
x = self._chunk(
x,
biases,
chunk_size,
use_memory_efficient_kernel=use_memory_efficient_kernel,
use_lma=use_lma,
inplace_safe=inplace_safe,
)
else:
x = self.mha(
q_x=x, kv_x=x, biases=biases, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma
)
if not self.starting:
x = x.transpose(-2, -3)
return x
class EsmFoldTriangleMultiplicativeUpdate(nn.Module):
"""
Implements Algorithms 11 and 12.
"""
def __init__(self, config, _outgoing=True):
super().__init__()
c_hidden = config.pairwise_state_dim
self._outgoing = _outgoing
self.linear_a_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_a_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_b_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_b_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_z = EsmFoldLinear(c_hidden, c_hidden, init="final")
self.layer_norm_in = LayerNorm(c_hidden)
self.layer_norm_out = LayerNorm(c_hidden)
self.sigmoid = nn.Sigmoid()
def _combine_projections(
self, a: torch.Tensor, b: torch.Tensor, _inplace_chunk_size: Optional[int] = None
) -> torch.Tensor:
if self._outgoing:
a = permute_final_dims(a, (2, 0, 1))
b = permute_final_dims(b, (2, 1, 0))
else:
a = permute_final_dims(a, (2, 1, 0))
b = permute_final_dims(b, (2, 0, 1))
if _inplace_chunk_size is not None:
# To be replaced by torch vmap
for i in range(0, a.shape[-3], _inplace_chunk_size):
a_chunk = a[..., i : i + _inplace_chunk_size, :, :]
b_chunk = b[..., i : i + _inplace_chunk_size, :, :]
a[..., i : i + _inplace_chunk_size, :, :] = torch.matmul(
a_chunk,
b_chunk,
)
p = a
else:
p = torch.matmul(a, b)
return permute_final_dims(p, (1, 2, 0))
def _inference_forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_chunk_size: Optional[int] = None,
with_add: bool = True,
):
"""
Args:
z:
A [*, N, N, C_z] pair representation
mask:
A [*, N, N] pair mask
inplace_chunk_size:
Size of chunks used in the main computation. Increase to trade memory for speed.
with_add:
If True, z is overwritten with (z + update). Otherwise, it is overwritten with (update).
Returns:
A reference to the overwritten z
More memory-efficient, inference-only version of the forward function. Uses in-place operations, fusion of the
addition that happens after this module in the Evoformer, a smidge of recomputation, and a cache of overwritten
values to lower peak memory consumption of this module from 5x the size of the input tensor z to 2.5x its size.
Useful for inference on extremely long sequences.
It works as follows. We will make reference to variables used in the default forward implementation below.
Naively, triangle multiplication attention requires the manifestation of 5 tensors the size of z: 1) z, the
"square" input tensor, 2) a, the first projection of z, 3) b, the second projection of b, 4) g, a z-sized mask,
and 5) a z-sized tensor for intermediate computations. For large N, this is prohibitively expensive; for
N=4000, for example, z is more than 8GB alone. To avoid this problem, we compute b, g, and all intermediate
tensors in small chunks, noting that the chunks required to compute a chunk of the output depend only on the
tensor a and corresponding vertical and horizontal chunks of z. This suggests an algorithm that loops over
pairs of chunks of z: hereafter "columns" and "rows" of z, even though each "column" and "row" in fact contains
inplace_chunk_size contiguous true columns and rows of z. Writing output chunks to a new tensor would bring
total memory consumption down to 3x the size of z. However, more memory can be saved by writing output chunks
directly to z in-place. WLOG, we choose to write output chunks vertically, overwriting the ith "column" of z at
the end of the ith iteration of the main loop. Despite this overwriting, the ith column is always one column
ahead of previously overwritten columns and can be recovered directly from z. After the first iteration,
however, the ith row of z is always at least partially overwritten. For this reason, we introduce the z-cache,
a tensor one-half the size of z. The z-cache initially contains the left half (2nd and 3rd quadrants) of z. For
0 < i < N/2, the missing left part of the ith row of z is recovered from this cache at the beginning of the ith
iteration. Once i exceeds n/2, the cache is "reoriented" to encompass the 3rd and 4th quadrants of z instead.
Though the 3rd quadrant of the original z is entirely overwritten at this point, it can be recovered from the
z-cache itself. Thereafter, the ith row of z can be recovered in its entirety from the reoriented z-cache.
After the final iteration, z has been completely overwritten and contains the triangular multiplicative update.
If with_add is True, it instead contains the sum of z and the triangular multiplicative update. In either case,
peak memory consumption is just 2.5x the size of z, disregarding memory used for chunks and other small
variables.
"""
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
def compute_projection_helper(pair, mask, a=True):
if a:
linear_g = self.linear_a_g
linear_p = self.linear_a_p
else:
linear_g = self.linear_b_g
linear_p = self.linear_b_p
pair = self.layer_norm_in(pair)
p = linear_g(pair)
p.sigmoid_()
p *= linear_p(pair)
p *= mask
p = permute_final_dims(p, (2, 0, 1))
return p
def compute_projection(pair, mask, a=True, chunked=True):
need_transpose = self._outgoing ^ a
if not chunked:
p = compute_projection_helper(pair, mask, a)
if need_transpose:
p = p.transpose(-1, -2)
else:
# This computation is chunked so as not to exceed our 2.5x
# budget with a large intermediate tensor
linear_g = self.linear_a_g if a else self.linear_b_g
c = linear_g.bias.shape[-1]
out_shape = pair.shape[:-3] + (c,) + pair.shape[-3:-1]
p = pair.new_zeros(out_shape)
for i in range(0, pair.shape[-3], inplace_chunk_size):
pair_chunk = pair[..., i : i + inplace_chunk_size, :, :]
pair_chunk = compute_projection_helper(
pair[..., i : i + inplace_chunk_size, :, :],
mask[..., i : i + inplace_chunk_size, :, :],
a,
)
if need_transpose:
pair_chunk = pair_chunk.transpose(-1, -2)
p[..., i : i + inplace_chunk_size] = pair_chunk
else:
p[..., i : i + inplace_chunk_size, :] = pair_chunk
del pair_chunk
return p
# We start by fully manifesting a. In addition to the input, this
# brings total memory consumption to 2x z (disregarding size of chunks)
# [*, N, N, c]
a = compute_projection(z, mask, True, chunked=True)
if inplace_chunk_size is not None:
n = a.shape[-1]
half_n = n // 2 + n % 2
row_dim = -3
col_dim = -2
b_chunk_dim = row_dim if self._outgoing else col_dim
def empty_slicer(t):
return [slice(None) for _ in t.shape]
def slice_tensor(t, start, end, dim):
# Slices start:end from the dim dimension of t
s = empty_slicer(t)
s[dim] = slice(start, end)
return t[s]
def flip_z_cache_(z_cache, z):
# "Reorient" the z_cache (see below), filling it with quadrants
# 3---recovered from the z_cache---and 4---recovered from z---
# of the input tensor z.
quadrant_3 = slice_tensor(z_cache, half_n, None, row_dim)
z_cache = z_cache.transpose(row_dim, col_dim)
# If n is odd, we need to shrink the z_cache by one row
z_cache = z_cache[..., : (n // 2), :, :]
# Move the 3rd quadrant of z into the
first_half_slicer = empty_slicer(z_cache)
first_half_slicer[col_dim] = slice(0, half_n)
z_cache[first_half_slicer] = quadrant_3
# Get the fourth quadrant of z
quadrant_4 = slice_tensor(z, half_n, None, row_dim)
quadrant_4 = slice_tensor(quadrant_4, half_n, None, col_dim)
# Insert said quadrant into the rotated z-cache
quadrant_3_slicer = empty_slicer(z_cache)
quadrant_3_slicer[col_dim] = slice(half_n, None)
z_cache[quadrant_3_slicer] = quadrant_4
return z_cache
# Initialize the z cache to the left half of z.
z_cache_shape = list(z.shape)
z_cache_shape[col_dim] = half_n
z_cache = z.new_zeros(z_cache_shape)
z_cache_slicer = empty_slicer(z_cache)
z_cache_slicer[col_dim] = slice(0, half_n)
z_cache.copy_(z[z_cache_slicer])
z_cache_rotated = False
# We need to reorient the z-cache at the halfway point, and we
# don't want a single chunk to straddle that point. We contract one
# of the chunks in the middle to address that problem.
i_range = list(range(0, half_n, inplace_chunk_size))
initial_offsets = [i_2 - i_1 for i_1, i_2 in zip(i_range, i_range[1:] + [half_n])]
after_half = list(range(half_n, n, inplace_chunk_size))
after_half_offsets = [inplace_chunk_size for _ in after_half]
combined_range_with_offsets = zip(i_range + after_half, initial_offsets + after_half_offsets)
for i, offset in combined_range_with_offsets:
if not z_cache_rotated and i >= half_n:
z_cache = flip_z_cache_(z_cache, z)
z_cache_rotated = True
z_chunk_b = slice_tensor(z, i, i + offset, b_chunk_dim)
mask_chunk = slice_tensor(mask, i, i + offset, b_chunk_dim)
z_chunk_b = z_chunk_b.clone()
if b_chunk_dim == col_dim:
z_chunk_b = slice_tensor(z, i, i + offset, col_dim)
else: # b_chunk_dim == row_dim
# In this case, the b-dimension (b_chunk_dim) is partially
# overwritten at the end of each iteration. We need to
# restore the missing component from the z-cache.
if not z_cache_rotated:
z_chunk_slicer = empty_slicer(z_chunk_b)
z_chunk_slicer[col_dim] = slice(0, half_n)
z_chunk_b[z_chunk_slicer] = slice_tensor(z_cache, i, i + offset, row_dim)
else:
z_cache_offset = i - half_n
z_chunk_b = slice_tensor(z_cache, z_cache_offset, z_cache_offset + offset, row_dim)
b_chunk = compute_projection(z_chunk_b, mask_chunk, a=False, chunked=False)
del z_chunk_b
x_chunk = torch.matmul(a, b_chunk)
x_chunk = permute_final_dims(x_chunk, (1, 2, 0))
x_chunk = self.layer_norm_out(x_chunk)
x_chunk = self.linear_z(x_chunk)
# The g dimension (col_dim) is parallel to and ahead of the
# overwrites in z. We can extract the g chunk normally.
z_chunk_g = slice_tensor(z, i, i + offset, col_dim)
g_chunk = self.linear_g(self.layer_norm_in(z_chunk_g))
g_chunk.sigmoid_()
del z_chunk_g
x_chunk *= g_chunk
# Write the columns into z in-place
z_slicer = empty_slicer(z)
z_slicer[col_dim] = slice(i, i + offset)
if with_add:
z[z_slicer] += x_chunk
else:
z[z_slicer] = x_chunk
else:
b = compute_projection(z, mask, False, False)
x = torch.matmul(a, b)
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.linear_g(z)
g.sigmoid_()
x *= g
if with_add:
z += x
else:
z = x
return z
def forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_safe: bool = False,
_add_with_inplace: bool = False,
_inplace_chunk_size: Optional[int] = 256,
) -> torch.Tensor:
"""
Args:
x:
[*, N_res, N_res, C_z] input tensor
mask:
[*, N_res, N_res] input mask
Returns:
[*, N_res, N_res, C_z] output tensor
"""
if inplace_safe:
x = self._inference_forward(
z,
mask,
inplace_chunk_size=_inplace_chunk_size,
with_add=_add_with_inplace,
)
return x
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
z = self.layer_norm_in(z)
a = mask
a = a * self.sigmoid(self.linear_a_g(z))
a = a * self.linear_a_p(z)
b = mask
b = b * self.sigmoid(self.linear_b_g(z))
b = b * self.linear_b_p(z)
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
x = self._combine_projections(a.float(), b.float())
else:
x = self._combine_projections(a, b)
del a, b
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.sigmoid(self.linear_g(z))
x = x * g
return x
class EsmFoldPreTrainedModel(EsmPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
# Subclass `EsMPreTrainedModel` to deal with special init
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, EsmFoldLinear):
with torch.no_grad():
if module.init_fn is not None:
module.init_fn(module.weight, module.bias)
elif module.init == "default":
trunc_normal_init_(module.weight, scale=1.0)
elif module.init == "relu":
trunc_normal_init_(module.weight, scale=2.0)
elif module.init == "glorot":
nn.init.xavier_uniform_(module.weight, gain=1)
elif module.init == "gating":
module.weight.fill_(0.0)
if module.bias:
module.bias.fill_(1.0)
elif module.init == "normal":
torch.nn.init.kaiming_normal_(module.weight, nonlinearity="linear")
elif module.init == "final":
module.weight.fill_(0.0)
elif isinstance(module, EsmFoldInvariantPointAttention):
ipa_point_weights_init_(module.head_weights)
elif isinstance(module, EsmFoldTriangularSelfAttentionBlock):
torch.nn.init.zeros_(module.tri_mul_in.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_in.linear_z.bias)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.bias)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.bias)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.bias)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.weight)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.bias)
torch.nn.init.zeros_(module.pair_to_sequence.linear.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.bias)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].bias)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].bias)
else:
super()._init_weights(module)
class EsmFoldSelfAttention(nn.Module):
def __init__(self, embed_dim, num_heads, head_width, gated=False):
super().__init__()
assert embed_dim == num_heads * head_width
self.embed_dim = embed_dim
self.num_heads = num_heads
self.head_width = head_width
self.proj = nn.Linear(embed_dim, embed_dim * 3, bias=False)
self.o_proj = nn.Linear(embed_dim, embed_dim, bias=True)
self.gated = gated
if gated:
self.g_proj = nn.Linear(embed_dim, embed_dim)
torch.nn.init.zeros_(self.g_proj.weight)
torch.nn.init.ones_(self.g_proj.bias)
self.rescale_factor = self.head_width**-0.5
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, x, mask=None, bias=None, indices=None):
"""
Basic self attention with optional mask and external pairwise bias. To handle sequences of different lengths,
use mask.
Inputs:
x: batch of input sequneces (.. x L x C) mask: batch of boolean masks where 1=valid, 0=padding position (..
x L_k) bias: batch of scalar pairwise attention biases (.. x Lq x Lk x num_heads)
Outputs:
sequence projection (B x L x embed_dim), attention maps (B x L x L x num_heads)
"""
t = self.proj(x).view(*x.shape[:2], self.num_heads, -1)
t = t.permute(0, 2, 1, 3)
q, k, v = t.chunk(3, dim=-1)
q = self.rescale_factor * q
a = torch.einsum("...qc,...kc->...qk", q, k)
# Add external attention bias.
if bias is not None:
a = a + bias.permute(0, 3, 1, 2)
# Do not attend to padding tokens.
if mask is not None:
mask = mask[:, None, None]
a = a.masked_fill(mask == False, -np.inf) # noqa: E712
a = nn.functional.softmax(a, dim=-1)
y = torch.einsum("...hqk,...hkc->...qhc", a, v)
y = y.reshape(*y.shape[:2], -1)
if self.gated:
y = self.g_proj(x).sigmoid() * y
y = self.o_proj(y)
return y, a.permute(0, 3, 1, 2)
class EsmFoldDropout(nn.Module):
"""
Implementation of dropout with the ability to share the dropout mask along a particular dimension.
"""
def __init__(self, r: float, batch_dim: Union[int, List[int]]):
super().__init__()
self.r = r
if isinstance(batch_dim, int):
batch_dim = [batch_dim]
self.batch_dim = batch_dim
self.dropout = nn.Dropout(self.r)
def forward(self, x: torch.Tensor) -> torch.Tensor:
shape = list(x.shape)
if self.batch_dim is not None:
for bd in self.batch_dim:
shape[bd] = 1
return x * self.dropout(x.new_ones(shape))
class EsmFoldSequenceToPair(nn.Module):
def __init__(self, sequence_state_dim, inner_dim, pairwise_state_dim):
super().__init__()
self.layernorm = nn.LayerNorm(sequence_state_dim)
self.proj = nn.Linear(sequence_state_dim, inner_dim * 2, bias=True)
self.o_proj = nn.Linear(2 * inner_dim, pairwise_state_dim, bias=True)
torch.nn.init.zeros_(self.proj.bias)
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, sequence_state):
"""
Inputs:
sequence_state: B x L x sequence_state_dim
Output:
pairwise_state: B x L x L x pairwise_state_dim
Intermediate state:
B x L x L x 2*inner_dim
"""
assert len(sequence_state.shape) == 3
s = self.layernorm(sequence_state)
s = self.proj(s)
q, k = s.chunk(2, dim=-1)
prod = q[:, None, :, :] * k[:, :, None, :]
diff = q[:, None, :, :] - k[:, :, None, :]
x = torch.cat([prod, diff], dim=-1)
x = self.o_proj(x)
return x
class EsmFoldPairToSequence(nn.Module):
def __init__(self, pairwise_state_dim, num_heads):
super().__init__()
self.layernorm = nn.LayerNorm(pairwise_state_dim)
self.linear = nn.Linear(pairwise_state_dim, num_heads, bias=False)
def forward(self, pairwise_state):
"""
Inputs:
pairwise_state: B x L x L x pairwise_state_dim
Output:
pairwise_bias: B x L x L x num_heads
"""
assert len(pairwise_state.shape) == 4
z = self.layernorm(pairwise_state)
pairwise_bias = self.linear(z)
return pairwise_bias
class EsmFoldResidueMLP(nn.Module):
def __init__(self, embed_dim, inner_dim, dropout=0):
super().__init__()
self.mlp = nn.Sequential(
nn.LayerNorm(embed_dim),
nn.Linear(embed_dim, inner_dim),
nn.ReLU(),
nn.Linear(inner_dim, embed_dim),
nn.Dropout(dropout),
)
def forward(self, x):
return x + self.mlp(x)
class EsmFoldTriangularSelfAttentionBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
sequence_state_dim = config.sequence_state_dim
pairwise_state_dim = config.pairwise_state_dim
sequence_num_heads = sequence_state_dim // config.sequence_head_width
pairwise_num_heads = pairwise_state_dim // config.pairwise_head_width
self.layernorm_1 = nn.LayerNorm(sequence_state_dim)
self.sequence_to_pair = EsmFoldSequenceToPair(sequence_state_dim, pairwise_state_dim // 2, pairwise_state_dim)
self.pair_to_sequence = EsmFoldPairToSequence(pairwise_state_dim, sequence_num_heads)
self.seq_attention = EsmFoldSelfAttention(
sequence_state_dim, sequence_num_heads, config.sequence_head_width, gated=True
)
self.tri_mul_out = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=True)
self.tri_mul_in = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=False)
self.tri_att_start = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=True
)
self.tri_att_end = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=False
)
self.mlp_seq = EsmFoldResidueMLP(sequence_state_dim, 4 * sequence_state_dim, dropout=config.dropout)
self.mlp_pair = EsmFoldResidueMLP(pairwise_state_dim, 4 * pairwise_state_dim, dropout=config.dropout)
self.drop = nn.Dropout(config.dropout)
self.row_drop = EsmFoldDropout(config.dropout * 2, 2)
self.col_drop = EsmFoldDropout(config.dropout * 2, 1)
def forward(self, sequence_state, pairwise_state, mask=None, chunk_size=None, **__kwargs):
"""
Inputs:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim mask: B x L boolean
tensor of valid positions
Output:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim
"""
if len(sequence_state.shape) != 3:
raise ValueError(f"`sequence_state` should be a 3d-tensor, got {len(sequence_state.shape)} dims.")
if len(pairwise_state.shape) != 4:
raise ValueError(f"`pairwise_state` should be a 4d-tensor, got {len(pairwise_state.shape)} dims.")
if mask is not None and len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim, sequence_state_dim = sequence_state.shape
pairwise_state_dim = pairwise_state.shape[3]
if sequence_state_dim != self.config.sequence_state_dim:
raise ValueError(
"`sequence_state` last dimension should be equal to `self.sequence_state_dim`. Got "
f"{sequence_state_dim} != {self.config.sequence_state_dim}."
)
if pairwise_state_dim != self.config.pairwise_state_dim:
raise ValueError(
"`pairwise_state` last dimension should be equal to `self.pairwise_state_dim`. Got "
f"{pairwise_state_dim} != {self.config.pairwise_state_dim}."
)
if batch_dim != pairwise_state.shape[0]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent batch size: {batch_dim} != "
f"{pairwise_state.shape[0]}."
)
if seq_dim != pairwise_state.shape[1] or seq_dim != pairwise_state.shape[2]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent sequence length: {seq_dim} != "
f"{pairwise_state.shape[1]} or {pairwise_state.shape[2]}."
)
# Update sequence state
bias = self.pair_to_sequence(pairwise_state)
# Self attention with bias + mlp.
y = self.layernorm_1(sequence_state)
y, _ = self.seq_attention(y, mask=mask, bias=bias)
sequence_state = sequence_state + self.drop(y)
sequence_state = self.mlp_seq(sequence_state)
# Update pairwise state
pairwise_state = pairwise_state + self.sequence_to_pair(sequence_state)
# Axial attention with triangular bias.
tri_mask = mask.unsqueeze(2) * mask.unsqueeze(1) if mask is not None else None
pairwise_state = pairwise_state + self.row_drop(self.tri_mul_out(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.col_drop(self.tri_mul_in(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.row_drop(
self.tri_att_start(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
pairwise_state = pairwise_state + self.col_drop(
self.tri_att_end(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
# MLP over pairs.
pairwise_state = self.mlp_pair(pairwise_state)
return sequence_state, pairwise_state
class EsmCategoricalMixture:
def __init__(self, param, bins=50, start=0, end=1):
# All tensors are of shape ..., bins.
self.logits = param
bins = torch.linspace(start, end, bins + 1, device=self.logits.device, dtype=self.logits.dtype)
self.v_bins = (bins[:-1] + bins[1:]) / 2
def log_prob(self, true):
# Shapes are:
# self.probs: ... x bins
# true : ...
true_index = (true.unsqueeze(-1) - self.v_bins[[None] * true.ndim]).abs().argmin(-1)
nll = self.logits.log_softmax(-1)
return torch.take_along_dim(nll, true_index.unsqueeze(-1), dim=-1).squeeze(-1)
def mean(self):
return (self.logits.softmax(-1) @ self.v_bins.unsqueeze(1)).squeeze(-1)
def categorical_lddt(logits, bins=50):
# Logits are ..., 37, bins.
return EsmCategoricalMixture(logits, bins=bins).mean()
def get_axial_mask(mask):
"""
Helper to convert B x L mask of valid positions to axial mask used in row column attentions.
Input:
mask: B x L tensor of booleans
Output:
mask: B x L x L tensor of booleans
"""
if mask is None:
return None
if len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim = mask.shape
m = mask.unsqueeze(1).expand(batch_dim, seq_dim, seq_dim)
m = m.reshape(batch_dim * seq_dim, seq_dim)
return m
class EsmFoldRelativePosition(nn.Module):
def __init__(self, config):
super().__init__()
self.bins = config.position_bins
# Note an additional offset is used so that the 0th position
# is reserved for masked pairs.
self.embedding = torch.nn.Embedding(2 * self.bins + 2, config.pairwise_state_dim)
def forward(self, residue_index, mask=None):
"""
Input:
residue_index: B x L tensor of indices (dytpe=torch.long) mask: B x L tensor of booleans
Output:
pairwise_state: B x L x L x pairwise_state_dim tensor of embeddings
"""
if residue_index.dtype != torch.long:
raise ValueError(f"`residue_index` has dtype {residue_index.dtype}, it should be `torch.long`.")
if mask is not None and residue_index.shape != mask.shape:
raise ValueError(
f"`residue_index` and `mask` have inconsistent shapes: {residue_index.shape} != {mask.shape}."
)
diff = residue_index[:, None, :] - residue_index[:, :, None]
diff = diff.clamp(-self.bins, self.bins)
diff = diff + self.bins + 1 # Add 1 to adjust for padding index.
if mask is not None:
mask = mask[:, None, :] * mask[:, :, None]
diff[mask == False] = 0 # noqa: E712
output = self.embedding(diff)
return output
class EsmFoldAngleResnetBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="final")
self.relu = nn.ReLU()
def forward(self, a: torch.Tensor) -> torch.Tensor:
s_initial = a
a = self.relu(a)
a = self.linear_1(a)
a = self.relu(a)
a = self.linear_2(a)
return a + s_initial
class EsmFoldAngleResnet(nn.Module):
"""
Implements Algorithm 20, lines 11-14
"""
def __init__(self, config):
super().__init__()
self.config = config
self.linear_in = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.linear_initial = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.layers = nn.ModuleList()
for _ in range(config.num_resnet_blocks):
layer = EsmFoldAngleResnetBlock(config)
self.layers.append(layer)
self.linear_out = EsmFoldLinear(config.resnet_dim, config.num_angles * 2)
self.relu = nn.ReLU()
def forward(self, s: torch.Tensor, s_initial: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
s:
[*, C_hidden] single embedding
s_initial:
[*, C_hidden] single embedding as of the start of the StructureModule
Returns:
[*, no_angles, 2] predicted angles
"""
# NOTE: The ReLU's applied to the inputs are absent from the supplement
# pseudocode but present in the source. For maximal compatibility with
# the pretrained weights, I'm going with the source.
# [*, C_hidden]
s_initial = self.relu(s_initial)
s_initial = self.linear_initial(s_initial)
s = self.relu(s)
s = self.linear_in(s)
s = s + s_initial
for l in self.layers:
s = l(s)
s = self.relu(s)
# [*, no_angles * 2]
s = self.linear_out(s)
# [*, no_angles, 2]
s = s.view(s.shape[:-1] + (-1, 2))
unnormalized_s = s
norm_denom = torch.sqrt(
torch.clamp(
torch.sum(s**2, dim=-1, keepdim=True),
min=self.config.epsilon,
)
)
s = s / norm_denom
return unnormalized_s, s
class EsmFoldInvariantPointAttention(nn.Module):
"""
Implements Algorithm 22.
"""
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_dim
c_z = config.pairwise_dim
self.hidden_dim = config.ipa_dim
self.num_heads = config.num_heads_ipa
self.num_qk_points = config.num_qk_points
self.num_v_points = config.num_v_points
# These linear layers differ from their specifications in the
# supplement. There, they lack bias and use Glorot initialization.
# Here as in the official source, they have bias and use the default
# Lecun initialization.
hc = config.ipa_dim * config.num_heads_ipa
self.linear_q = EsmFoldLinear(c_s, hc)
self.linear_kv = EsmFoldLinear(c_s, 2 * hc)
hpq = config.num_heads_ipa * config.num_qk_points * 3
self.linear_q_points = EsmFoldLinear(c_s, hpq)
hpkv = config.num_heads_ipa * (config.num_qk_points + config.num_v_points) * 3
self.linear_kv_points = EsmFoldLinear(c_s, hpkv)
self.linear_b = EsmFoldLinear(c_z, config.num_heads_ipa)
self.head_weights = nn.Parameter(torch.zeros((config.num_heads_ipa)))
concat_out_dim = config.num_heads_ipa * (c_z + config.ipa_dim + config.num_v_points * 4)
self.linear_out = EsmFoldLinear(concat_out_dim, c_s, init="final")
self.softmax = nn.Softmax(dim=-1)
self.softplus = nn.Softplus()
def forward(
self,
s: torch.Tensor,
z: Optional[torch.Tensor],
r: Rigid,
mask: torch.Tensor,
_offload_inference: bool = False,
_z_reference_list: Optional[Sequence[torch.Tensor]] = None,
) -> torch.Tensor:
"""
Args:
s:
[*, N_res, C_s] single representation
z:
[*, N_res, N_res, C_z] pair representation
r:
[*, N_res] transformation object
mask:
[*, N_res] mask
Returns:
[*, N_res, C_s] single representation update
"""
z = [z]
#######################################
# Generate scalar and point activations
#######################################
# [*, N_res, H * C_hidden]
q = self.linear_q(s)
kv = self.linear_kv(s)
# [*, N_res, H, C_hidden]
q = q.view(q.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, 2 * C_hidden]
kv = kv.view(kv.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, C_hidden]
k, v = torch.split(kv, self.hidden_dim, dim=-1)
# [*, N_res, H * P_q * 3]
q_pts = self.linear_q_points(s)
# This is kind of clunky, but it's how the original does it
# [*, N_res, H * P_q, 3]
q_pts = torch.split(q_pts, q_pts.shape[-1] // 3, dim=-1)
q_pts = torch.stack(q_pts, dim=-1)
q_pts = r[..., None].apply(q_pts)
# [*, N_res, H, P_q, 3]
q_pts = q_pts.view(q_pts.shape[:-2] + (self.num_heads, self.num_qk_points, 3))
# [*, N_res, H * (P_q + P_v) * 3]
kv_pts = self.linear_kv_points(s)
# [*, N_res, H * (P_q + P_v), 3]
kv_pts = torch.split(kv_pts, kv_pts.shape[-1] // 3, dim=-1)
kv_pts = torch.stack(kv_pts, dim=-1)
kv_pts = r[..., None].apply(kv_pts)
# [*, N_res, H, (P_q + P_v), 3]
kv_pts = kv_pts.view(kv_pts.shape[:-2] + (self.num_heads, -1, 3))
# [*, N_res, H, P_q/P_v, 3]
k_pts, v_pts = torch.split(kv_pts, [self.num_qk_points, self.num_v_points], dim=-2)
##########################
# Compute attention scores
##########################
# [*, N_res, N_res, H]
b = self.linear_b(z[0])
if _offload_inference:
assert sys.getrefcount(z[0]) == 2
z[0] = z[0].cpu()
# [*, H, N_res, N_res]
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
a = torch.matmul(
permute_final_dims(q.float(), (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k.float(), (1, 2, 0)), # [*, H, C_hidden, N_res]
)
else:
a = torch.matmul(
permute_final_dims(q, (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k, (1, 2, 0)), # [*, H, C_hidden, N_res]
)
a *= math.sqrt(1.0 / (3 * self.hidden_dim))
a += math.sqrt(1.0 / 3) * permute_final_dims(b, (2, 0, 1))
# [*, N_res, N_res, H, P_q, 3]
pt_att = q_pts.unsqueeze(-4) - k_pts.unsqueeze(-5)
pt_att = pt_att**2
# [*, N_res, N_res, H, P_q]
pt_att = sum(torch.unbind(pt_att, dim=-1))
head_weights = self.softplus(self.head_weights).view(*((1,) * len(pt_att.shape[:-2]) + (-1, 1)))
head_weights = head_weights * math.sqrt(1.0 / (3 * (self.num_qk_points * 9.0 / 2)))
pt_att = pt_att * head_weights
# [*, N_res, N_res, H]
pt_att = torch.sum(pt_att, dim=-1) * (-0.5)
# [*, N_res, N_res]
square_mask = mask.unsqueeze(-1) * mask.unsqueeze(-2)
square_mask = self.config.inf * (square_mask - 1)
# [*, H, N_res, N_res]
pt_att = permute_final_dims(pt_att, (2, 0, 1))
a = a + pt_att
a = a + square_mask.unsqueeze(-3)
a = self.softmax(a)
################
# Compute output
################
# [*, N_res, H, C_hidden]
o = torch.matmul(a, v.transpose(-2, -3).to(dtype=a.dtype)).transpose(-2, -3)
# [*, N_res, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, H, 3, N_res, P_v]
o_pt = torch.sum(
(a[..., None, :, :, None] * permute_final_dims(v_pts, (1, 3, 0, 2))[..., None, :, :]),
dim=-2,
)
# [*, N_res, H, P_v, 3]
o_pt = permute_final_dims(o_pt, (2, 0, 3, 1))
o_pt = r[..., None, None].invert_apply(o_pt)
# [*, N_res, H * P_v]
o_pt_norm = flatten_final_dims(torch.sqrt(torch.sum(o_pt**2, dim=-1) + self.config.epsilon), 2)
# [*, N_res, H * P_v, 3]
o_pt = o_pt.reshape(*o_pt.shape[:-3], -1, 3)
if _offload_inference:
z[0] = z[0].to(o_pt.device)
# [*, N_res, H, C_z]
o_pair = torch.matmul(a.transpose(-2, -3), z[0].to(dtype=a.dtype))
# [*, N_res, H * C_z]
o_pair = flatten_final_dims(o_pair, 2)
# [*, N_res, C_s]
s = self.linear_out(
torch.cat((o, *torch.unbind(o_pt, dim=-1), o_pt_norm, o_pair), dim=-1).to(dtype=z[0].dtype)
)
return s
class EsmFoldBackboneUpdate(nn.Module):
"""
Implements part of Algorithm 23.
"""
def __init__(self, config):
super().__init__()
self.linear = EsmFoldLinear(config.sequence_dim, 6, init="final")
def forward(self, s: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
[*, N_res, C_s] single representation
Returns:
[*, N_res, 6] update vector
"""
# [*, 6]
update = self.linear(s)
return update
class EsmFoldStructureModuleTransitionLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_3 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="final")
self.relu = nn.ReLU()
def forward(self, s):
s_initial = s
s = self.linear_1(s)
s = self.relu(s)
s = self.linear_2(s)
s = self.relu(s)
s = self.linear_3(s)
s = s + s_initial
return s
class EsmFoldStructureModuleTransition(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layers = nn.ModuleList()
for _ in range(config.num_transition_layers):
l = EsmFoldStructureModuleTransitionLayer(config)
self.layers.append(l)
self.dropout = nn.Dropout(config.dropout_rate)
self.layer_norm = LayerNorm(config.sequence_dim)
def forward(self, s):
for l in self.layers:
s = l(s)
s = self.dropout(s)
s = self.layer_norm(s)
return s
class EsmFoldStructureModule(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
# Buffers to be lazily initialized later
# self.default_frames
# self.group_idx
# self.atom_mask
# self.lit_positions
self.layer_norm_s = LayerNorm(config.sequence_dim)
self.layer_norm_z = LayerNorm(config.pairwise_dim)
self.linear_in = EsmFoldLinear(config.sequence_dim, config.sequence_dim)
self.ipa = EsmFoldInvariantPointAttention(config)
self.ipa_dropout = nn.Dropout(config.dropout_rate)
self.layer_norm_ipa = LayerNorm(config.sequence_dim)
self.transition = EsmFoldStructureModuleTransition(config)
self.bb_update = EsmFoldBackboneUpdate(config)
self.angle_resnet = EsmFoldAngleResnet(config)
def forward(
self,
evoformer_output_dict,
aatype,
mask=None,
_offload_inference=False,
):
"""
Args:
evoformer_output_dict:
Dictionary containing:
"single":
[*, N_res, C_s] single representation
"pair":
[*, N_res, N_res, C_z] pair representation
aatype:
[*, N_res] amino acid indices
mask:
Optional [*, N_res] sequence mask
Returns:
A dictionary of outputs
"""
s = evoformer_output_dict["single"]
if mask is None:
# [*, N]
mask = s.new_ones(s.shape[:-1])
# [*, N, C_s]
s = self.layer_norm_s(s)
# [*, N, N, C_z]
z = self.layer_norm_z(evoformer_output_dict["pair"])
z_reference_list = None
if _offload_inference:
assert sys.getrefcount(evoformer_output_dict["pair"]) == 2
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].cpu()
z_reference_list = [z]
z = None
# [*, N, C_s]
s_initial = s
s = self.linear_in(s)
# [*, N]
rigids = Rigid.identity(
s.shape[:-1],
s.dtype,
s.device,
self.training,
fmt="quat",
)
outputs = []
for i in range(self.config.num_blocks):
# [*, N, C_s]
s = s + self.ipa(
s,
z,
rigids,
mask,
_offload_inference=_offload_inference,
_z_reference_list=z_reference_list,
)
s = self.ipa_dropout(s)
s = self.layer_norm_ipa(s)
s = self.transition(s)
# [*, N]
rigids = rigids.compose_q_update_vec(self.bb_update(s))
# To hew as closely as possible to AlphaFold, we convert our
# quaternion-based transformations to rotation-matrix ones
# here
backb_to_global = Rigid(
Rotation(rot_mats=rigids.get_rots().get_rot_mats(), quats=None),
rigids.get_trans(),
)
backb_to_global = backb_to_global.scale_translation(self.config.trans_scale_factor)
# [*, N, 7, 2]
unnormalized_angles, angles = self.angle_resnet(s, s_initial)
all_frames_to_global = self.torsion_angles_to_frames(backb_to_global, angles, aatype)
pred_xyz = self.frames_and_literature_positions_to_atom14_pos(all_frames_to_global, aatype)
scaled_rigids = rigids.scale_translation(self.config.trans_scale_factor)
preds = {
"frames": scaled_rigids.to_tensor_7(),
"sidechain_frames": all_frames_to_global.to_tensor_4x4(),
"unnormalized_angles": unnormalized_angles,
"angles": angles,
"positions": pred_xyz,
"states": s,
}
outputs.append(preds)
rigids = rigids.stop_rot_gradient()
del z, z_reference_list
if _offload_inference:
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].to(s.device)
outputs = dict_multimap(torch.stack, outputs)
outputs["single"] = s
return outputs
def _init_residue_constants(self, float_dtype, device):
if not hasattr(self, "default_frames"):
self.register_buffer(
"default_frames",
torch.tensor(
residue_constants.restype_rigid_group_default_frame,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "group_idx"):
self.register_buffer(
"group_idx",
torch.tensor(
residue_constants.restype_atom14_to_rigid_group,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "atom_mask"):
self.register_buffer(
"atom_mask",
torch.tensor(
residue_constants.restype_atom14_mask,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "lit_positions"):
self.register_buffer(
"lit_positions",
torch.tensor(
residue_constants.restype_atom14_rigid_group_positions,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
def torsion_angles_to_frames(self, r, alpha, f):
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(alpha.dtype, alpha.device)
# Separated purely to make testing less annoying
return torsion_angles_to_frames(r, alpha, f, self.default_frames)
def frames_and_literature_positions_to_atom14_pos(self, r, f): # [*, N, 8] # [*, N]
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(r.get_rots().dtype, r.get_rots().device)
return frames_and_literature_positions_to_atom14_pos(
r,
f,
self.default_frames,
self.group_idx,
self.atom_mask,
self.lit_positions,
)
class EsmFoldingTrunk(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_state_dim
c_z = config.pairwise_state_dim
self.pairwise_positional_embedding = EsmFoldRelativePosition(config)
self.blocks = nn.ModuleList([EsmFoldTriangularSelfAttentionBlock(config) for _ in range(config.num_blocks)])
self.recycle_bins = 15
self.recycle_s_norm = nn.LayerNorm(c_s)
self.recycle_z_norm = nn.LayerNorm(c_z)
self.recycle_disto = nn.Embedding(self.recycle_bins, c_z)
self.recycle_disto.weight[0].detach().zero_()
self.structure_module = EsmFoldStructureModule(config.structure_module)
self.trunk2sm_s = nn.Linear(c_s, config.structure_module.sequence_dim)
self.trunk2sm_z = nn.Linear(c_z, config.structure_module.pairwise_dim)
self.chunk_size = config.chunk_size
def set_chunk_size(self, chunk_size):
# This parameter means the axial attention will be computed
# in a chunked manner. This should make the memory used more or less O(L) instead of O(L^2).
# It's equivalent to running a for loop over chunks of the dimension we're iterative over,
# where the chunk_size is the size of the chunks, so 128 would mean to parse 128-lengthed chunks.
self.chunk_size = chunk_size
def forward(self, seq_feats, pair_feats, true_aa, residx, mask, no_recycles):
"""
Inputs:
seq_feats: B x L x C tensor of sequence features pair_feats: B x L x L x C tensor of pair features residx: B
x L long tensor giving the position in the sequence mask: B x L boolean tensor indicating valid residues
Output:
predicted_structure: B x L x (num_atoms_per_residue * 3) tensor wrapped in a Coordinates object
"""
device = seq_feats.device
s_s_0 = seq_feats
s_z_0 = pair_feats
if no_recycles is None:
no_recycles = self.config.max_recycles
else:
if no_recycles < 0:
raise ValueError("Number of recycles must not be negative.")
no_recycles += 1 # First 'recycle' is just the standard forward pass through the model.
def trunk_iter(s, z, residx, mask):
z = z + self.pairwise_positional_embedding(residx, mask=mask)
for block in self.blocks:
s, z = block(s, z, mask=mask, residue_index=residx, chunk_size=self.chunk_size)
return s, z
s_s = s_s_0
s_z = s_z_0
recycle_s = torch.zeros_like(s_s)
recycle_z = torch.zeros_like(s_z)
recycle_bins = torch.zeros(*s_z.shape[:-1], device=device, dtype=torch.int64)
for recycle_idx in range(no_recycles):
with ContextManagers([] if recycle_idx == no_recycles - 1 else [torch.no_grad()]):
# === Recycling ===
recycle_s = self.recycle_s_norm(recycle_s.detach()).to(device)
recycle_z = self.recycle_z_norm(recycle_z.detach()).to(device)
recycle_z += self.recycle_disto(recycle_bins.detach()).to(device)
s_s, s_z = trunk_iter(s_s_0 + recycle_s, s_z_0 + recycle_z, residx, mask)
# === Structure module ===
structure = self.structure_module(
{"single": self.trunk2sm_s(s_s), "pair": self.trunk2sm_z(s_z)},
true_aa,
mask.float(),
)
recycle_s = s_s
recycle_z = s_z
# Distogram needs the N, CA, C coordinates, and bin constants same as alphafold.
recycle_bins = EsmFoldingTrunk.distogram(
structure["positions"][-1][:, :, :3],
3.375,
21.375,
self.recycle_bins,
)
structure["s_s"] = s_s
structure["s_z"] = s_z
return structure
@staticmethod
def distogram(coords, min_bin, max_bin, num_bins):
# Coords are [... L x 3 x 3], where it's [N, CA, C] x 3 coordinates.
boundaries = torch.linspace(
min_bin,
max_bin,
num_bins - 1,
device=coords.device,
)
boundaries = boundaries**2
N, CA, C = [x.squeeze(-2) for x in coords.chunk(3, dim=-2)]
# Infer CB coordinates.
b = CA - N
c = C - CA
a = b.cross(c, dim=-1)
CB = -0.58273431 * a + 0.56802827 * b - 0.54067466 * c + CA
dists = (CB[..., None, :, :] - CB[..., :, None, :]).pow(2).sum(dim=-1, keepdims=True)
bins = torch.sum(dists > boundaries, dim=-1) # [..., L, L]
return bins
# TODO Add information to the docstring about any methods that convert to PDB format, or otherwise prepare
# the outputs for downstream use.
@add_start_docstrings(
"""
ESMForProteinFolding is the HuggingFace port of the original ESMFold model. It consists of an ESM-2 "stem" followed
by a protein folding "head", although unlike most other output heads, this "head" is similar in size and runtime to
the rest of the model combined! It outputs a dictionary containing predicted structural information about the input
protein(s).
""",
ESM_START_DOCSTRING,
)
class EsmForProteinFolding(EsmPreTrainedModel):
_no_split_modules = ["EsmFoldStructureModule", "EsmFoldTriangularSelfAttentionBlock"]
def __init__(self, config):
super().__init__(config)
self.config = config
self.distogram_bins = 64
self.esm = EsmModel(config, add_pooling_layer=False)
self.esm.requires_grad_(False)
if self.config.esmfold_config.fp16_esm:
self.esm.half()
self.esm_feats = self.config.hidden_size
self.esm_attns = self.config.num_hidden_layers * self.config.num_attention_heads
self.esm_layers = self.config.num_hidden_layers
self.register_buffer("af2_to_esm", self._af2_to_esm_from_vocab_list(config.vocab_list))
self.esm_s_combine = nn.Parameter(torch.zeros(self.esm_layers + 1))
trunk_config = self.config.esmfold_config.trunk
c_s = trunk_config.sequence_state_dim
c_z = trunk_config.pairwise_state_dim
self.esm_s_mlp = nn.Sequential(
LayerNorm(self.esm_feats),
nn.Linear(self.esm_feats, c_s),
nn.ReLU(),
nn.Linear(c_s, c_s),
)
# 0 is padding, N is unknown residues, N + 1 is mask.
self.n_tokens_embed = residue_constants.restype_num + 3
self.pad_idx = 0
self.unk_idx = self.n_tokens_embed - 2
self.mask_idx = self.n_tokens_embed - 1
self.esm_dict_cls_idx = self.config.vocab_list.index("<cls>")
self.esm_dict_mask_idx = self.config.vocab_list.index("<mask>")
self.esm_dict_eos_idx = self.config.vocab_list.index("<eos>")
self.esm_dict_padding_idx = self.config.vocab_list.index("<pad>")
if self.config.esmfold_config.embed_aa:
self.embedding = nn.Embedding(self.n_tokens_embed, c_s, padding_idx=0)
self.trunk = EsmFoldingTrunk(trunk_config)
self.distogram_head = nn.Linear(c_z, self.distogram_bins)
self.ptm_head = nn.Linear(c_z, self.distogram_bins)
self.lm_head = nn.Linear(c_s, self.n_tokens_embed)
self.lddt_bins = 50
structure_module_config = trunk_config.structure_module
self.lddt_head = nn.Sequential(
nn.LayerNorm(structure_module_config.sequence_dim),
nn.Linear(structure_module_config.sequence_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, 37 * self.lddt_bins),
)
@staticmethod
def _af2_to_esm_from_vocab_list(vocab_list: List[str]) -> torch.Tensor:
# Remember that t is shifted from residue_constants by 1 (0 is padding).
esm_reorder = [vocab_list.index("<pad>")] + [vocab_list.index(v) for v in residue_constants.restypes_with_x]
return torch.tensor(esm_reorder)
@add_start_docstrings_to_model_forward(ESMFOLD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=EsmForProteinFoldingOutput, config_class=EsmConfig)
def forward(
self,
input_ids: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
masking_pattern: Optional[torch.Tensor] = None,
num_recycles: Optional[int] = None,
) -> EsmForProteinFoldingOutput:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, EsmForProteinFolding
>>> model = EsmForProteinFolding.from_pretrained("facebook/esmfold_v1")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/esmfold_v1")
>>> inputs = tokenizer(["MLKNVQVQLV"], return_tensors="pt", add_special_tokens=False) # A tiny random peptide
>>> outputs = model(**inputs)
>>> folded_positions = outputs.positions
```
"""
cfg = self.config.esmfold_config
aa = input_ids # B x L
B = aa.shape[0]
L = aa.shape[1]
device = input_ids.device
if attention_mask is None:
attention_mask = torch.ones_like(aa, device=device)
if position_ids is None:
position_ids = torch.arange(L, device=device).expand_as(input_ids)
# === ESM ===
esmaa = self.af2_idx_to_esm_idx(aa, attention_mask)
if masking_pattern is not None:
masked_aa, esmaa, mlm_targets = self.bert_mask(aa, esmaa, attention_mask, masking_pattern)
else:
masked_aa = aa
mlm_targets = None
# We get sequence and pair representations from whatever version of ESM /
# configuration we are using. The sequence representation esm_s is always
# present. The pair embedding esm_z may be present depending on the
# configuration of the model. If esm_z is not used by the model then it
# is returned as None here.
esm_s = self.compute_language_model_representations(esmaa)
# Convert esm_s and esm_z, if present, to the precision used by the trunk and
# the structure module. These tensors may be a lower precision if, for example,
# we're running the language model in fp16 precision.
esm_s = esm_s.to(self.esm_s_combine.dtype)
if cfg.esm_ablate_sequence:
esm_s = esm_s * 0
esm_s = esm_s.detach()
# === preprocessing ===
esm_s = (self.esm_s_combine.softmax(0).unsqueeze(0) @ esm_s).squeeze(2)
s_s_0 = self.esm_s_mlp(esm_s)
s_z_0 = s_s_0.new_zeros(B, L, L, cfg.trunk.pairwise_state_dim)
if self.config.esmfold_config.embed_aa:
s_s_0 += self.embedding(masked_aa)
structure: dict = self.trunk(s_s_0, s_z_0, aa, position_ids, attention_mask, no_recycles=num_recycles)
# Documenting what we expect:
structure = {
k: v
for k, v in structure.items()
if k
in [
"s_z",
"s_s",
"frames",
"sidechain_frames",
"unnormalized_angles",
"angles",
"positions",
"states",
]
}
# Add BERT mask for the loss to use, if available.
if mlm_targets:
structure["mlm_targets"] = mlm_targets
disto_logits = self.distogram_head(structure["s_z"])
disto_logits = (disto_logits + disto_logits.transpose(1, 2)) / 2
structure["distogram_logits"] = disto_logits
lm_logits = self.lm_head(structure["s_s"])
structure["lm_logits"] = lm_logits
structure["aatype"] = aa
make_atom14_masks(structure)
# Of course, this doesn't respect the true mask because it doesn't know about it...
# We're not going to properly mask change of index tensors:
# "residx_atom14_to_atom37",
# "residx_atom37_to_atom14",
for k in [
"atom14_atom_exists",
"atom37_atom_exists",
]:
structure[k] *= attention_mask.unsqueeze(-1)
structure["residue_index"] = position_ids
lddt_head = self.lddt_head(structure["states"]).reshape(structure["states"].shape[0], B, L, -1, self.lddt_bins)
structure["lddt_head"] = lddt_head
plddt = categorical_lddt(lddt_head[-1], bins=self.lddt_bins)
structure["plddt"] = plddt
ptm_logits = self.ptm_head(structure["s_z"])
structure["ptm_logits"] = ptm_logits
structure["ptm"] = compute_tm(ptm_logits, max_bin=31, no_bins=self.distogram_bins)
structure.update(compute_predicted_aligned_error(ptm_logits, max_bin=31, no_bins=self.distogram_bins))
return EsmForProteinFoldingOutput(**structure)
def af2_idx_to_esm_idx(self, aa, mask):
# avoid indexing on different devices
if self.af2_to_esm.device != aa.device:
self.af2_to_esm = self.af2_to_esm.to(aa.device)
aa = (aa + 1).masked_fill(mask != 1, 0)
return self.af2_to_esm[aa]
def compute_language_model_representations(self, esmaa: torch.Tensor) -> torch.Tensor:
device = next(self.parameters()).device
B, L = esmaa.shape # B = batch size, L = sequence length.
if self.config.esmfold_config.bypass_lm:
esm_s = torch.zeros(B, L, self.esm_s_combine.size[0], -1, self.esm_feats, device=device)
return esm_s
bosi, eosi = self.esm_dict_cls_idx, self.esm_dict_eos_idx
bos = esmaa.new_full((B, 1), bosi)
eos = esmaa.new_full((B, 1), self.esm_dict_padding_idx)
esmaa = torch.cat([bos, esmaa, eos], dim=1)
# Use the first padding index as eos during inference.
esmaa[range(B), (esmaa != 1).sum(1)] = eosi
# _, esm_z, esm_s = self.esm(esmaa, return_pairs=self.config.esmfold_config.use_esm_attn_map)
# Because we do not support use_esm_attn_map in the HF port as it is not used in any public models,
# esm_z is always None
esm_hidden_states = self.esm(esmaa, attention_mask=esmaa != 1, output_hidden_states=True)["hidden_states"]
esm_s = torch.stack(esm_hidden_states, dim=2)
esm_s = esm_s[:, 1:-1] # B, L, nLayers, C
return esm_s
def bert_mask(self, aa, esmaa, mask, pattern):
new_aa = aa.clone()
target = aa.clone()
new_esmaa = esmaa.clone()
new_aa[pattern == 1] = self.mask_idx
target[pattern != 1] = 0
new_esmaa[pattern == 1] = self.esm_dict_mask_idx
return new_aa, new_esmaa, target
@torch.no_grad()
def infer(
self,
seqs: Union[str, List[str]],
position_ids=None,
):
if isinstance(seqs, str):
lst = [seqs]
else:
lst = seqs
# Returns the raw outputs of the model given an input sequence.
device = next(self.parameters()).device
aatype = collate_dense_tensors(
[
torch.from_numpy(
residue_constants.sequence_to_onehot(
sequence=seq,
mapping=residue_constants.restype_order_with_x,
map_unknown_to_x=True,
)
)
.to(device)
.argmax(dim=1)
for seq in lst
]
) # B=1 x L
mask = collate_dense_tensors([aatype.new_ones(len(seq)) for seq in lst])
position_ids = (
torch.arange(aatype.shape[1], device=device).expand(len(lst), -1)
if position_ids is None
else position_ids.to(device)
)
if position_ids.ndim == 1:
position_ids = position_ids.unsqueeze(0)
return self.forward(
aatype,
mask,
position_ids=position_ids,
)
@staticmethod
def output_to_pdb(output: Dict) -> List[str]:
"""Returns the pbd (file) string from the model given the model output."""
output = {k: v.to("cpu").numpy() for k, v in output.items()}
pdbs = []
final_atom_positions = atom14_to_atom37(output["positions"][-1], output)
final_atom_mask = output["atom37_atom_exists"]
for i in range(output["aatype"].shape[0]):
aa = output["aatype"][i]
pred_pos = final_atom_positions[i]
mask = final_atom_mask[i]
resid = output["residue_index"][i] + 1
pred = OFProtein(
aatype=aa,
atom_positions=pred_pos,
atom_mask=mask,
residue_index=resid,
b_factors=output["plddt"][i],
)
pdbs.append(to_pdb(pred))
return pdbs
def infer_pdb(self, seqs, *args, **kwargs) -> str:
"""Returns the pdb (file) string from the model given an input sequence."""
assert isinstance(seqs, str)
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)[0]
def infer_pdbs(self, seqs: List[str], *args, **kwargs) -> List[str]:
"""Returns the pdb (file) string from the model given an input sequence."""
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/rigid_utils.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import annotations
from functools import lru_cache
from typing import Any, Callable, Dict, List, Optional, Sequence, Tuple
import numpy as np
import torch
def rot_matmul(a: torch.Tensor, b: torch.Tensor) -> torch.Tensor:
"""
Performs matrix multiplication of two rotation matrix tensors. Written out by hand to avoid AMP downcasting.
Args:
a: [*, 3, 3] left multiplicand
b: [*, 3, 3] right multiplicand
Returns:
The product ab
"""
def row_mul(i: int) -> torch.Tensor:
return torch.stack(
[
a[..., i, 0] * b[..., 0, 0] + a[..., i, 1] * b[..., 1, 0] + a[..., i, 2] * b[..., 2, 0],
a[..., i, 0] * b[..., 0, 1] + a[..., i, 1] * b[..., 1, 1] + a[..., i, 2] * b[..., 2, 1],
a[..., i, 0] * b[..., 0, 2] + a[..., i, 1] * b[..., 1, 2] + a[..., i, 2] * b[..., 2, 2],
],
dim=-1,
)
return torch.stack(
[
row_mul(0),
row_mul(1),
row_mul(2),
],
dim=-2,
)
def rot_vec_mul(r: torch.Tensor, t: torch.Tensor) -> torch.Tensor:
"""
Applies a rotation to a vector. Written out by hand to avoid transfer to avoid AMP downcasting.
Args:
r: [*, 3, 3] rotation matrices
t: [*, 3] coordinate tensors
Returns:
[*, 3] rotated coordinates
"""
x, y, z = torch.unbind(t, dim=-1)
return torch.stack(
[
r[..., 0, 0] * x + r[..., 0, 1] * y + r[..., 0, 2] * z,
r[..., 1, 0] * x + r[..., 1, 1] * y + r[..., 1, 2] * z,
r[..., 2, 0] * x + r[..., 2, 1] * y + r[..., 2, 2] * z,
],
dim=-1,
)
@lru_cache(maxsize=None)
def identity_rot_mats(
batch_dims: Tuple[int, ...],
dtype: Optional[torch.dtype] = None,
device: Optional[torch.device] = None,
requires_grad: bool = True,
) -> torch.Tensor:
rots = torch.eye(3, dtype=dtype, device=device, requires_grad=requires_grad)
rots = rots.view(*((1,) * len(batch_dims)), 3, 3)
rots = rots.expand(*batch_dims, -1, -1)
rots = rots.contiguous()
return rots
@lru_cache(maxsize=None)
def identity_trans(
batch_dims: Tuple[int, ...],
dtype: Optional[torch.dtype] = None,
device: Optional[torch.device] = None,
requires_grad: bool = True,
) -> torch.Tensor:
trans = torch.zeros((*batch_dims, 3), dtype=dtype, device=device, requires_grad=requires_grad)
return trans
@lru_cache(maxsize=None)
def identity_quats(
batch_dims: Tuple[int, ...],
dtype: Optional[torch.dtype] = None,
device: Optional[torch.device] = None,
requires_grad: bool = True,
) -> torch.Tensor:
quat = torch.zeros((*batch_dims, 4), dtype=dtype, device=device, requires_grad=requires_grad)
with torch.no_grad():
quat[..., 0] = 1
return quat
_quat_elements: List[str] = ["a", "b", "c", "d"]
_qtr_keys: List[str] = [l1 + l2 for l1 in _quat_elements for l2 in _quat_elements]
_qtr_ind_dict: Dict[str, int] = {key: ind for ind, key in enumerate(_qtr_keys)}
def _to_mat(pairs: List[Tuple[str, int]]) -> np.ndarray:
mat = np.zeros((4, 4))
for key, value in pairs:
ind = _qtr_ind_dict[key]
mat[ind // 4][ind % 4] = value
return mat
_QTR_MAT = np.zeros((4, 4, 3, 3))
_QTR_MAT[..., 0, 0] = _to_mat([("aa", 1), ("bb", 1), ("cc", -1), ("dd", -1)])
_QTR_MAT[..., 0, 1] = _to_mat([("bc", 2), ("ad", -2)])
_QTR_MAT[..., 0, 2] = _to_mat([("bd", 2), ("ac", 2)])
_QTR_MAT[..., 1, 0] = _to_mat([("bc", 2), ("ad", 2)])
_QTR_MAT[..., 1, 1] = _to_mat([("aa", 1), ("bb", -1), ("cc", 1), ("dd", -1)])
_QTR_MAT[..., 1, 2] = _to_mat([("cd", 2), ("ab", -2)])
_QTR_MAT[..., 2, 0] = _to_mat([("bd", 2), ("ac", -2)])
_QTR_MAT[..., 2, 1] = _to_mat([("cd", 2), ("ab", 2)])
_QTR_MAT[..., 2, 2] = _to_mat([("aa", 1), ("bb", -1), ("cc", -1), ("dd", 1)])
def quat_to_rot(quat: torch.Tensor) -> torch.Tensor:
"""
Converts a quaternion to a rotation matrix.
Args:
quat: [*, 4] quaternions
Returns:
[*, 3, 3] rotation matrices
"""
# [*, 4, 4]
quat = quat[..., None] * quat[..., None, :]
# [4, 4, 3, 3]
mat = _get_quat("_QTR_MAT", dtype=quat.dtype, device=quat.device)
# [*, 4, 4, 3, 3]
shaped_qtr_mat = mat.view((1,) * len(quat.shape[:-2]) + mat.shape)
quat = quat[..., None, None] * shaped_qtr_mat
# [*, 3, 3]
return torch.sum(quat, dim=(-3, -4))
def rot_to_quat(rot: torch.Tensor) -> torch.Tensor:
if rot.shape[-2:] != (3, 3):
raise ValueError("Input rotation is incorrectly shaped")
[[xx, xy, xz], [yx, yy, yz], [zx, zy, zz]] = [[rot[..., i, j] for j in range(3)] for i in range(3)]
k = [
[
xx + yy + zz,
zy - yz,
xz - zx,
yx - xy,
],
[
zy - yz,
xx - yy - zz,
xy + yx,
xz + zx,
],
[
xz - zx,
xy + yx,
yy - xx - zz,
yz + zy,
],
[
yx - xy,
xz + zx,
yz + zy,
zz - xx - yy,
],
]
_, vectors = torch.linalg.eigh((1.0 / 3.0) * torch.stack([torch.stack(t, dim=-1) for t in k], dim=-2))
return vectors[..., -1]
_QUAT_MULTIPLY = np.zeros((4, 4, 4))
_QUAT_MULTIPLY[:, :, 0] = [[1, 0, 0, 0], [0, -1, 0, 0], [0, 0, -1, 0], [0, 0, 0, -1]]
_QUAT_MULTIPLY[:, :, 1] = [[0, 1, 0, 0], [1, 0, 0, 0], [0, 0, 0, 1], [0, 0, -1, 0]]
_QUAT_MULTIPLY[:, :, 2] = [[0, 0, 1, 0], [0, 0, 0, -1], [1, 0, 0, 0], [0, 1, 0, 0]]
_QUAT_MULTIPLY[:, :, 3] = [[0, 0, 0, 1], [0, 0, 1, 0], [0, -1, 0, 0], [1, 0, 0, 0]]
_QUAT_MULTIPLY_BY_VEC = _QUAT_MULTIPLY[:, 1:, :]
_CACHED_QUATS: Dict[str, np.ndarray] = {
"_QTR_MAT": _QTR_MAT,
"_QUAT_MULTIPLY": _QUAT_MULTIPLY,
"_QUAT_MULTIPLY_BY_VEC": _QUAT_MULTIPLY_BY_VEC,
}
@lru_cache(maxsize=None)
def _get_quat(quat_key: str, dtype: torch.dtype, device: torch.device) -> torch.Tensor:
return torch.tensor(_CACHED_QUATS[quat_key], dtype=dtype, device=device)
def quat_multiply(quat1: torch.Tensor, quat2: torch.Tensor) -> torch.Tensor:
"""Multiply a quaternion by another quaternion."""
mat = _get_quat("_QUAT_MULTIPLY", dtype=quat1.dtype, device=quat1.device)
reshaped_mat = mat.view((1,) * len(quat1.shape[:-1]) + mat.shape)
return torch.sum(reshaped_mat * quat1[..., :, None, None] * quat2[..., None, :, None], dim=(-3, -2))
def quat_multiply_by_vec(quat: torch.Tensor, vec: torch.Tensor) -> torch.Tensor:
"""Multiply a quaternion by a pure-vector quaternion."""
mat = _get_quat("_QUAT_MULTIPLY_BY_VEC", dtype=quat.dtype, device=quat.device)
reshaped_mat = mat.view((1,) * len(quat.shape[:-1]) + mat.shape)
return torch.sum(reshaped_mat * quat[..., :, None, None] * vec[..., None, :, None], dim=(-3, -2))
def invert_rot_mat(rot_mat: torch.Tensor) -> torch.Tensor:
return rot_mat.transpose(-1, -2)
def invert_quat(quat: torch.Tensor) -> torch.Tensor:
quat_prime = quat.clone()
quat_prime[..., 1:] *= -1
inv = quat_prime / torch.sum(quat**2, dim=-1, keepdim=True)
return inv
class Rotation:
"""
A 3D rotation. Depending on how the object is initialized, the rotation is represented by either a rotation matrix
or a quaternion, though both formats are made available by helper functions. To simplify gradient computation, the
underlying format of the rotation cannot be changed in-place. Like Rigid, the class is designed to mimic the
behavior of a torch Tensor, almost as if each Rotation object were a tensor of rotations, in one format or another.
"""
def __init__(
self,
rot_mats: Optional[torch.Tensor] = None,
quats: Optional[torch.Tensor] = None,
normalize_quats: bool = True,
):
"""
Args:
rot_mats:
A [*, 3, 3] rotation matrix tensor. Mutually exclusive with quats
quats:
A [*, 4] quaternion. Mutually exclusive with rot_mats. If normalize_quats is not True, must be a unit
quaternion
normalize_quats:
If quats is specified, whether to normalize quats
"""
if (rot_mats is None and quats is None) or (rot_mats is not None and quats is not None):
raise ValueError("Exactly one input argument must be specified")
if (rot_mats is not None and rot_mats.shape[-2:] != (3, 3)) or (quats is not None and quats.shape[-1] != 4):
raise ValueError("Incorrectly shaped rotation matrix or quaternion")
# Force full-precision
if quats is not None:
quats = quats.to(dtype=torch.float32)
if rot_mats is not None:
rot_mats = rot_mats.to(dtype=torch.float32)
if quats is not None and normalize_quats:
quats = quats / torch.linalg.norm(quats, dim=-1, keepdim=True)
self._rot_mats = rot_mats
self._quats = quats
@staticmethod
def identity(
shape,
dtype: Optional[torch.dtype] = None,
device: Optional[torch.device] = None,
requires_grad: bool = True,
fmt: str = "quat",
) -> Rotation:
"""
Returns an identity Rotation.
Args:
shape:
The "shape" of the resulting Rotation object. See documentation for the shape property
dtype:
The torch dtype for the rotation
device:
The torch device for the new rotation
requires_grad:
Whether the underlying tensors in the new rotation object should require gradient computation
fmt:
One of "quat" or "rot_mat". Determines the underlying format of the new object's rotation
Returns:
A new identity rotation
"""
if fmt == "rot_mat":
rot_mats = identity_rot_mats(
shape,
dtype,
device,
requires_grad,
)
return Rotation(rot_mats=rot_mats, quats=None)
elif fmt == "quat":
quats = identity_quats(shape, dtype, device, requires_grad)
return Rotation(rot_mats=None, quats=quats, normalize_quats=False)
else:
raise ValueError(f"Invalid format: f{fmt}")
# Magic methods
def __getitem__(self, index: Any) -> Rotation:
"""
Allows torch-style indexing over the virtual shape of the rotation object. See documentation for the shape
property.
Args:
index:
A torch index. E.g. (1, 3, 2), or (slice(None,))
Returns:
The indexed rotation
"""
if type(index) != tuple:
index = (index,)
if self._rot_mats is not None:
rot_mats = self._rot_mats[index + (slice(None), slice(None))]
return Rotation(rot_mats=rot_mats)
elif self._quats is not None:
quats = self._quats[index + (slice(None),)]
return Rotation(quats=quats, normalize_quats=False)
else:
raise ValueError("Both rotations are None")
def __mul__(self, right: torch.Tensor) -> Rotation:
"""
Pointwise left multiplication of the rotation with a tensor. Can be used to e.g. mask the Rotation.
Args:
right:
The tensor multiplicand
Returns:
The product
"""
if not (isinstance(right, torch.Tensor)):
raise TypeError("The other multiplicand must be a Tensor")
if self._rot_mats is not None:
rot_mats = self._rot_mats * right[..., None, None]
return Rotation(rot_mats=rot_mats, quats=None)
elif self._quats is not None:
quats = self._quats * right[..., None]
return Rotation(rot_mats=None, quats=quats, normalize_quats=False)
else:
raise ValueError("Both rotations are None")
def __rmul__(self, left: torch.Tensor) -> Rotation:
"""
Reverse pointwise multiplication of the rotation with a tensor.
Args:
left:
The left multiplicand
Returns:
The product
"""
return self.__mul__(left)
# Properties
@property
def shape(self) -> torch.Size:
"""
Returns the virtual shape of the rotation object. This shape is defined as the batch dimensions of the
underlying rotation matrix or quaternion. If the Rotation was initialized with a [10, 3, 3] rotation matrix
tensor, for example, the resulting shape would be [10].
Returns:
The virtual shape of the rotation object
"""
if self._rot_mats is not None:
return self._rot_mats.shape[:-2]
elif self._quats is not None:
return self._quats.shape[:-1]
else:
raise ValueError("Both rotations are None")
@property
def dtype(self) -> torch.dtype:
"""
Returns the dtype of the underlying rotation.
Returns:
The dtype of the underlying rotation
"""
if self._rot_mats is not None:
return self._rot_mats.dtype
elif self._quats is not None:
return self._quats.dtype
else:
raise ValueError("Both rotations are None")
@property
def device(self) -> torch.device:
"""
The device of the underlying rotation
Returns:
The device of the underlying rotation
"""
if self._rot_mats is not None:
return self._rot_mats.device
elif self._quats is not None:
return self._quats.device
else:
raise ValueError("Both rotations are None")
@property
def requires_grad(self) -> bool:
"""
Returns the requires_grad property of the underlying rotation
Returns:
The requires_grad property of the underlying tensor
"""
if self._rot_mats is not None:
return self._rot_mats.requires_grad
elif self._quats is not None:
return self._quats.requires_grad
else:
raise ValueError("Both rotations are None")
def get_rot_mats(self) -> torch.Tensor:
"""
Returns the underlying rotation as a rotation matrix tensor.
Returns:
The rotation as a rotation matrix tensor
"""
if self._rot_mats is not None:
return self._rot_mats
elif self._quats is not None:
return quat_to_rot(self._quats)
else:
raise ValueError("Both rotations are None")
def get_quats(self) -> torch.Tensor:
"""
Returns the underlying rotation as a quaternion tensor.
Depending on whether the Rotation was initialized with a quaternion, this function may call torch.linalg.eigh.
Returns:
The rotation as a quaternion tensor.
"""
if self._rot_mats is not None:
return rot_to_quat(self._rot_mats)
elif self._quats is not None:
return self._quats
else:
raise ValueError("Both rotations are None")
def get_cur_rot(self) -> torch.Tensor:
"""
Return the underlying rotation in its current form
Returns:
The stored rotation
"""
if self._rot_mats is not None:
return self._rot_mats
elif self._quats is not None:
return self._quats
else:
raise ValueError("Both rotations are None")
# Rotation functions
def compose_q_update_vec(self, q_update_vec: torch.Tensor, normalize_quats: bool = True) -> Rotation:
"""
Returns a new quaternion Rotation after updating the current object's underlying rotation with a quaternion
update, formatted as a [*, 3] tensor whose final three columns represent x, y, z such that (1, x, y, z) is the
desired (not necessarily unit) quaternion update.
Args:
q_update_vec:
A [*, 3] quaternion update tensor
normalize_quats:
Whether to normalize the output quaternion
Returns:
An updated Rotation
"""
quats = self.get_quats()
new_quats = quats + quat_multiply_by_vec(quats, q_update_vec)
return Rotation(
rot_mats=None,
quats=new_quats,
normalize_quats=normalize_quats,
)
def compose_r(self, r: Rotation) -> Rotation:
"""
Compose the rotation matrices of the current Rotation object with those of another.
Args:
r:
An update rotation object
Returns:
An updated rotation object
"""
r1 = self.get_rot_mats()
r2 = r.get_rot_mats()
new_rot_mats = rot_matmul(r1, r2)
return Rotation(rot_mats=new_rot_mats, quats=None)
def compose_q(self, r: Rotation, normalize_quats: bool = True) -> Rotation:
"""
Compose the quaternions of the current Rotation object with those of another.
Depending on whether either Rotation was initialized with quaternions, this function may call
torch.linalg.eigh.
Args:
r:
An update rotation object
Returns:
An updated rotation object
"""
q1 = self.get_quats()
q2 = r.get_quats()
new_quats = quat_multiply(q1, q2)
return Rotation(rot_mats=None, quats=new_quats, normalize_quats=normalize_quats)
def apply(self, pts: torch.Tensor) -> torch.Tensor:
"""
Apply the current Rotation as a rotation matrix to a set of 3D coordinates.
Args:
pts:
A [*, 3] set of points
Returns:
[*, 3] rotated points
"""
rot_mats = self.get_rot_mats()
return rot_vec_mul(rot_mats, pts)
def invert_apply(self, pts: torch.Tensor) -> torch.Tensor:
"""
The inverse of the apply() method.
Args:
pts:
A [*, 3] set of points
Returns:
[*, 3] inverse-rotated points
"""
rot_mats = self.get_rot_mats()
inv_rot_mats = invert_rot_mat(rot_mats)
return rot_vec_mul(inv_rot_mats, pts)
def invert(self) -> Rotation:
"""
Returns the inverse of the current Rotation.
Returns:
The inverse of the current Rotation
"""
if self._rot_mats is not None:
return Rotation(rot_mats=invert_rot_mat(self._rot_mats), quats=None)
elif self._quats is not None:
return Rotation(
rot_mats=None,
quats=invert_quat(self._quats),
normalize_quats=False,
)
else:
raise ValueError("Both rotations are None")
# "Tensor" stuff
def unsqueeze(self, dim: int) -> Rotation:
"""
Analogous to torch.unsqueeze. The dimension is relative to the shape of the Rotation object.
Args:
dim: A positive or negative dimension index.
Returns:
The unsqueezed Rotation.
"""
if dim >= len(self.shape):
raise ValueError("Invalid dimension")
if self._rot_mats is not None:
rot_mats = self._rot_mats.unsqueeze(dim if dim >= 0 else dim - 2)
return Rotation(rot_mats=rot_mats, quats=None)
elif self._quats is not None:
quats = self._quats.unsqueeze(dim if dim >= 0 else dim - 1)
return Rotation(rot_mats=None, quats=quats, normalize_quats=False)
else:
raise ValueError("Both rotations are None")
@staticmethod
def cat(rs: Sequence[Rotation], dim: int) -> Rotation:
"""
Concatenates rotations along one of the batch dimensions. Analogous to torch.cat().
Note that the output of this operation is always a rotation matrix, regardless of the format of input
rotations.
Args:
rs:
A list of rotation objects
dim:
The dimension along which the rotations should be concatenated
Returns:
A concatenated Rotation object in rotation matrix format
"""
rot_mats = torch.cat(
[r.get_rot_mats() for r in rs],
dim=dim if dim >= 0 else dim - 2,
)
return Rotation(rot_mats=rot_mats, quats=None)
def map_tensor_fn(self, fn: Callable[[torch.Tensor], torch.Tensor]) -> Rotation:
"""
Apply a Tensor -> Tensor function to underlying rotation tensors, mapping over the rotation dimension(s). Can
be used e.g. to sum out a one-hot batch dimension.
Args:
fn:
A Tensor -> Tensor function to be mapped over the Rotation
Returns:
The transformed Rotation object
"""
if self._rot_mats is not None:
rot_mats = self._rot_mats.view(self._rot_mats.shape[:-2] + (9,))
rot_mats = torch.stack(list(map(fn, torch.unbind(rot_mats, dim=-1))), dim=-1)
rot_mats = rot_mats.view(rot_mats.shape[:-1] + (3, 3))
return Rotation(rot_mats=rot_mats, quats=None)
elif self._quats is not None:
quats = torch.stack(list(map(fn, torch.unbind(self._quats, dim=-1))), dim=-1)
return Rotation(rot_mats=None, quats=quats, normalize_quats=False)
else:
raise ValueError("Both rotations are None")
def cuda(self) -> Rotation:
"""
Analogous to the cuda() method of torch Tensors
Returns:
A copy of the Rotation in CUDA memory
"""
if self._rot_mats is not None:
return Rotation(rot_mats=self._rot_mats.cuda(), quats=None)
elif self._quats is not None:
return Rotation(rot_mats=None, quats=self._quats.cuda(), normalize_quats=False)
else:
raise ValueError("Both rotations are None")
def to(self, device: Optional[torch.device], dtype: Optional[torch.dtype]) -> Rotation:
"""
Analogous to the to() method of torch Tensors
Args:
device:
A torch device
dtype:
A torch dtype
Returns:
A copy of the Rotation using the new device and dtype
"""
if self._rot_mats is not None:
return Rotation(
rot_mats=self._rot_mats.to(device=device, dtype=dtype),
quats=None,
)
elif self._quats is not None:
return Rotation(
rot_mats=None,
quats=self._quats.to(device=device, dtype=dtype),
normalize_quats=False,
)
else:
raise ValueError("Both rotations are None")
def detach(self) -> Rotation:
"""
Returns a copy of the Rotation whose underlying Tensor has been detached from its torch graph.
Returns:
A copy of the Rotation whose underlying Tensor has been detached from its torch graph
"""
if self._rot_mats is not None:
return Rotation(rot_mats=self._rot_mats.detach(), quats=None)
elif self._quats is not None:
return Rotation(
rot_mats=None,
quats=self._quats.detach(),
normalize_quats=False,
)
else:
raise ValueError("Both rotations are None")
class Rigid:
"""
A class representing a rigid transformation. Little more than a wrapper around two objects: a Rotation object and a
[*, 3] translation Designed to behave approximately like a single torch tensor with the shape of the shared batch
dimensions of its component parts.
"""
def __init__(self, rots: Optional[Rotation], trans: Optional[torch.Tensor]):
"""
Args:
rots: A [*, 3, 3] rotation tensor
trans: A corresponding [*, 3] translation tensor
"""
# (we need device, dtype, etc. from at least one input)
batch_dims, dtype, device, requires_grad = None, None, None, None
if trans is not None:
batch_dims = trans.shape[:-1]
dtype = trans.dtype
device = trans.device
requires_grad = trans.requires_grad
elif rots is not None:
batch_dims = rots.shape
dtype = rots.dtype
device = rots.device
requires_grad = rots.requires_grad
else:
raise ValueError("At least one input argument must be specified")
if rots is None:
rots = Rotation.identity(
batch_dims,
dtype,
device,
requires_grad,
)
elif trans is None:
trans = identity_trans(
batch_dims,
dtype,
device,
requires_grad,
)
assert rots is not None
assert trans is not None
if (rots.shape != trans.shape[:-1]) or (rots.device != trans.device):
raise ValueError("Rots and trans incompatible")
# Force full precision. Happens to the rotations automatically.
trans = trans.to(dtype=torch.float32)
self._rots = rots
self._trans = trans
@staticmethod
def identity(
shape: Tuple[int, ...],
dtype: Optional[torch.dtype] = None,
device: Optional[torch.device] = None,
requires_grad: bool = True,
fmt: str = "quat",
) -> Rigid:
"""
Constructs an identity transformation.
Args:
shape:
The desired shape
dtype:
The dtype of both internal tensors
device:
The device of both internal tensors
requires_grad:
Whether grad should be enabled for the internal tensors
Returns:
The identity transformation
"""
return Rigid(
Rotation.identity(shape, dtype, device, requires_grad, fmt=fmt),
identity_trans(shape, dtype, device, requires_grad),
)
def __getitem__(self, index: Any) -> Rigid:
"""
Indexes the affine transformation with PyTorch-style indices. The index is applied to the shared dimensions of
both the rotation and the translation.
E.g.::
r = Rotation(rot_mats=torch.rand(10, 10, 3, 3), quats=None) t = Rigid(r, torch.rand(10, 10, 3)) indexed =
t[3, 4:6] assert(indexed.shape == (2,)) assert(indexed.get_rots().shape == (2,))
assert(indexed.get_trans().shape == (2, 3))
Args:
index: A standard torch tensor index. E.g. 8, (10, None, 3),
or (3, slice(0, 1, None))
Returns:
The indexed tensor
"""
if type(index) != tuple:
index = (index,)
return Rigid(
self._rots[index],
self._trans[index + (slice(None),)],
)
def __mul__(self, right: torch.Tensor) -> Rigid:
"""
Pointwise left multiplication of the transformation with a tensor. Can be used to e.g. mask the Rigid.
Args:
right:
The tensor multiplicand
Returns:
The product
"""
if not (isinstance(right, torch.Tensor)):
raise TypeError("The other multiplicand must be a Tensor")
new_rots = self._rots * right
new_trans = self._trans * right[..., None]
return Rigid(new_rots, new_trans)
def __rmul__(self, left: torch.Tensor) -> Rigid:
"""
Reverse pointwise multiplication of the transformation with a tensor.
Args:
left:
The left multiplicand
Returns:
The product
"""
return self.__mul__(left)
@property
def shape(self) -> torch.Size:
"""
Returns the shape of the shared dimensions of the rotation and the translation.
Returns:
The shape of the transformation
"""
return self._trans.shape[:-1]
@property
def device(self) -> torch.device:
"""
Returns the device on which the Rigid's tensors are located.
Returns:
The device on which the Rigid's tensors are located
"""
return self._trans.device
def get_rots(self) -> Rotation:
"""
Getter for the rotation.
Returns:
The rotation object
"""
return self._rots
def get_trans(self) -> torch.Tensor:
"""
Getter for the translation.
Returns:
The stored translation
"""
return self._trans
def compose_q_update_vec(self, q_update_vec: torch.Tensor) -> Rigid:
"""
Composes the transformation with a quaternion update vector of shape [*, 6], where the final 6 columns
represent the x, y, and z values of a quaternion of form (1, x, y, z) followed by a 3D translation.
Args:
q_vec: The quaternion update vector.
Returns:
The composed transformation.
"""
q_vec, t_vec = q_update_vec[..., :3], q_update_vec[..., 3:]
new_rots = self._rots.compose_q_update_vec(q_vec)
trans_update = self._rots.apply(t_vec)
new_translation = self._trans + trans_update
return Rigid(new_rots, new_translation)
def compose(self, r: Rigid) -> Rigid:
"""
Composes the current rigid object with another.
Args:
r:
Another Rigid object
Returns:
The composition of the two transformations
"""
new_rot = self._rots.compose_r(r._rots)
new_trans = self._rots.apply(r._trans) + self._trans
return Rigid(new_rot, new_trans)
def apply(self, pts: torch.Tensor) -> torch.Tensor:
"""
Applies the transformation to a coordinate tensor.
Args:
pts: A [*, 3] coordinate tensor.
Returns:
The transformed points.
"""
rotated = self._rots.apply(pts)
return rotated + self._trans
def invert_apply(self, pts: torch.Tensor) -> torch.Tensor:
"""
Applies the inverse of the transformation to a coordinate tensor.
Args:
pts: A [*, 3] coordinate tensor
Returns:
The transformed points.
"""
pts = pts - self._trans
return self._rots.invert_apply(pts)
def invert(self) -> Rigid:
"""
Inverts the transformation.
Returns:
The inverse transformation.
"""
rot_inv = self._rots.invert()
trn_inv = rot_inv.apply(self._trans)
return Rigid(rot_inv, -1 * trn_inv)
def map_tensor_fn(self, fn: Callable[[torch.Tensor], torch.Tensor]) -> Rigid:
"""
Apply a Tensor -> Tensor function to underlying translation and rotation tensors, mapping over the
translation/rotation dimensions respectively.
Args:
fn:
A Tensor -> Tensor function to be mapped over the Rigid
Returns:
The transformed Rigid object
"""
new_rots = self._rots.map_tensor_fn(fn)
new_trans = torch.stack(list(map(fn, torch.unbind(self._trans, dim=-1))), dim=-1)
return Rigid(new_rots, new_trans)
def to_tensor_4x4(self) -> torch.Tensor:
"""
Converts a transformation to a homogenous transformation tensor.
Returns:
A [*, 4, 4] homogenous transformation tensor
"""
tensor = self._trans.new_zeros((*self.shape, 4, 4))
tensor[..., :3, :3] = self._rots.get_rot_mats()
tensor[..., :3, 3] = self._trans
tensor[..., 3, 3] = 1
return tensor
@staticmethod
def from_tensor_4x4(t: torch.Tensor) -> Rigid:
"""
Constructs a transformation from a homogenous transformation tensor.
Args:
t: [*, 4, 4] homogenous transformation tensor
Returns:
T object with shape [*]
"""
if t.shape[-2:] != (4, 4):
raise ValueError("Incorrectly shaped input tensor")
rots = Rotation(rot_mats=t[..., :3, :3], quats=None)
trans = t[..., :3, 3]
return Rigid(rots, trans)
def to_tensor_7(self) -> torch.Tensor:
"""
Converts a transformation to a tensor with 7 final columns, four for the quaternion followed by three for the
translation.
Returns:
A [*, 7] tensor representation of the transformation
"""
tensor = self._trans.new_zeros((*self.shape, 7))
tensor[..., :4] = self._rots.get_quats()
tensor[..., 4:] = self._trans
return tensor
@staticmethod
def from_tensor_7(t: torch.Tensor, normalize_quats: bool = False) -> Rigid:
if t.shape[-1] != 7:
raise ValueError("Incorrectly shaped input tensor")
quats, trans = t[..., :4], t[..., 4:]
rots = Rotation(rot_mats=None, quats=quats, normalize_quats=normalize_quats)
return Rigid(rots, trans)
@staticmethod
def from_3_points(
p_neg_x_axis: torch.Tensor, origin: torch.Tensor, p_xy_plane: torch.Tensor, eps: float = 1e-8
) -> Rigid:
"""
Implements algorithm 21. Constructs transformations from sets of 3 points using the Gram-Schmidt algorithm.
Args:
p_neg_x_axis: [*, 3] coordinates
origin: [*, 3] coordinates used as frame origins
p_xy_plane: [*, 3] coordinates
eps: Small epsilon value
Returns:
A transformation object of shape [*]
"""
p_neg_x_axis_unbound = torch.unbind(p_neg_x_axis, dim=-1)
origin_unbound = torch.unbind(origin, dim=-1)
p_xy_plane_unbound = torch.unbind(p_xy_plane, dim=-1)
e0 = [c1 - c2 for c1, c2 in zip(origin_unbound, p_neg_x_axis_unbound)]
e1 = [c1 - c2 for c1, c2 in zip(p_xy_plane_unbound, origin_unbound)]
denom = torch.sqrt(sum(c * c for c in e0) + eps * torch.ones_like(e0[0]))
e0 = [c / denom for c in e0]
dot = sum((c1 * c2 for c1, c2 in zip(e0, e1)))
e1 = [c2 - c1 * dot for c1, c2 in zip(e0, e1)]
denom = torch.sqrt(sum((c * c for c in e1)) + eps * torch.ones_like(e1[0]))
e1 = [c / denom for c in e1]
e2 = [
e0[1] * e1[2] - e0[2] * e1[1],
e0[2] * e1[0] - e0[0] * e1[2],
e0[0] * e1[1] - e0[1] * e1[0],
]
rots = torch.stack([c for tup in zip(e0, e1, e2) for c in tup], dim=-1)
rots = rots.reshape(rots.shape[:-1] + (3, 3))
rot_obj = Rotation(rot_mats=rots, quats=None)
return Rigid(rot_obj, torch.stack(origin_unbound, dim=-1))
def unsqueeze(self, dim: int) -> Rigid:
"""
Analogous to torch.unsqueeze. The dimension is relative to the shared dimensions of the rotation/translation.
Args:
dim: A positive or negative dimension index.
Returns:
The unsqueezed transformation.
"""
if dim >= len(self.shape):
raise ValueError("Invalid dimension")
rots = self._rots.unsqueeze(dim)
trans = self._trans.unsqueeze(dim if dim >= 0 else dim - 1)
return Rigid(rots, trans)
@staticmethod
def cat(ts: Sequence[Rigid], dim: int) -> Rigid:
"""
Concatenates transformations along a new dimension.
Args:
ts:
A list of T objects
dim:
The dimension along which the transformations should be concatenated
Returns:
A concatenated transformation object
"""
rots = Rotation.cat([t._rots for t in ts], dim)
trans = torch.cat([t._trans for t in ts], dim=dim if dim >= 0 else dim - 1)
return Rigid(rots, trans)
def apply_rot_fn(self, fn: Callable[[Rotation], Rotation]) -> Rigid:
"""
Applies a Rotation -> Rotation function to the stored rotation object.
Args:
fn: A function of type Rotation -> Rotation
Returns:
A transformation object with a transformed rotation.
"""
return Rigid(fn(self._rots), self._trans)
def apply_trans_fn(self, fn: Callable[[torch.Tensor], torch.Tensor]) -> Rigid:
"""
Applies a Tensor -> Tensor function to the stored translation.
Args:
fn:
A function of type Tensor -> Tensor to be applied to the translation
Returns:
A transformation object with a transformed translation.
"""
return Rigid(self._rots, fn(self._trans))
def scale_translation(self, trans_scale_factor: float) -> Rigid:
"""
Scales the translation by a constant factor.
Args:
trans_scale_factor:
The constant factor
Returns:
A transformation object with a scaled translation.
"""
return self.apply_trans_fn(lambda t: t * trans_scale_factor)
def stop_rot_gradient(self) -> Rigid:
"""
Detaches the underlying rotation object
Returns:
A transformation object with detached rotations
"""
return self.apply_rot_fn(lambda r: r.detach())
@staticmethod
def make_transform_from_reference(
n_xyz: torch.Tensor, ca_xyz: torch.Tensor, c_xyz: torch.Tensor, eps: float = 1e-20
) -> Rigid:
"""
Returns a transformation object from reference coordinates.
Note that this method does not take care of symmetries. If you provide the atom positions in the non-standard
way, the N atom will end up not at [-0.527250, 1.359329, 0.0] but instead at [-0.527250, -1.359329, 0.0]. You
need to take care of such cases in your code.
Args:
n_xyz: A [*, 3] tensor of nitrogen xyz coordinates.
ca_xyz: A [*, 3] tensor of carbon alpha xyz coordinates.
c_xyz: A [*, 3] tensor of carbon xyz coordinates.
Returns:
A transformation object. After applying the translation and rotation to the reference backbone, the
coordinates will approximately equal to the input coordinates.
"""
translation = -1 * ca_xyz
n_xyz = n_xyz + translation
c_xyz = c_xyz + translation
c_x, c_y, c_z = [c_xyz[..., i] for i in range(3)]
norm = torch.sqrt(eps + c_x**2 + c_y**2)
sin_c1 = -c_y / norm
cos_c1 = c_x / norm
c1_rots = sin_c1.new_zeros((*sin_c1.shape, 3, 3))
c1_rots[..., 0, 0] = cos_c1
c1_rots[..., 0, 1] = -1 * sin_c1
c1_rots[..., 1, 0] = sin_c1
c1_rots[..., 1, 1] = cos_c1
c1_rots[..., 2, 2] = 1
norm = torch.sqrt(eps + c_x**2 + c_y**2 + c_z**2)
sin_c2 = c_z / norm
cos_c2 = torch.sqrt(c_x**2 + c_y**2) / norm
c2_rots = sin_c2.new_zeros((*sin_c2.shape, 3, 3))
c2_rots[..., 0, 0] = cos_c2
c2_rots[..., 0, 2] = sin_c2
c2_rots[..., 1, 1] = 1
c2_rots[..., 2, 0] = -1 * sin_c2
c2_rots[..., 2, 2] = cos_c2
c_rots = rot_matmul(c2_rots, c1_rots)
n_xyz = rot_vec_mul(c_rots, n_xyz)
_, n_y, n_z = [n_xyz[..., i] for i in range(3)]
norm = torch.sqrt(eps + n_y**2 + n_z**2)
sin_n = -n_z / norm
cos_n = n_y / norm
n_rots = sin_c2.new_zeros((*sin_c2.shape, 3, 3))
n_rots[..., 0, 0] = 1
n_rots[..., 1, 1] = cos_n
n_rots[..., 1, 2] = -1 * sin_n
n_rots[..., 2, 1] = sin_n
n_rots[..., 2, 2] = cos_n
rots = rot_matmul(n_rots, c_rots)
rots = rots.transpose(-1, -2)
translation = -1 * translation
rot_obj = Rotation(rot_mats=rots, quats=None)
return Rigid(rot_obj, translation)
def cuda(self) -> Rigid:
"""
Moves the transformation object to GPU memory
Returns:
A version of the transformation on GPU
"""
return Rigid(self._rots.cuda(), self._trans.cuda())
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/chunk_utils.py | # Copyright 2021 AlQuraishi Laboratory
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import logging
import math
from functools import partial
from typing import Any, Callable, Dict, Iterable, List, Optional, Sequence, Tuple, Union
import torch
from .tensor_utils import tensor_tree_map, tree_map
def _fetch_dims(tree: Union[dict, list, tuple, torch.Tensor]) -> List[Tuple[int, ...]]:
shapes = []
if isinstance(tree, dict):
for v in tree.values():
shapes.extend(_fetch_dims(v))
elif isinstance(tree, (list, tuple)):
for t in tree:
shapes.extend(_fetch_dims(t))
elif isinstance(tree, torch.Tensor):
shapes.append(tree.shape)
else:
raise ValueError("Not supported")
return shapes
@torch.jit.ignore
def _flat_idx_to_idx(flat_idx: int, dims: Tuple[int, ...]) -> Tuple[int, ...]:
idx = []
for d in reversed(dims):
idx.append(flat_idx % d)
flat_idx = flat_idx // d
return tuple(reversed(idx))
@torch.jit.ignore
def _get_minimal_slice_set(
start: Sequence[int],
end: Sequence[int],
dims: Sequence[int],
start_edges: Optional[Sequence[bool]] = None,
end_edges: Optional[Sequence[bool]] = None,
) -> List[Tuple[slice, ...]]:
"""
Produces an ordered sequence of tensor slices that, when used in sequence on a tensor with shape dims, yields
tensors that contain every leaf in the contiguous range [start, end]. Care is taken to yield a short sequence of
slices, and perhaps even the shortest possible (I'm pretty sure it's the latter).
end is INCLUSIVE.
"""
# start_edges and end_edges both indicate whether, starting from any given
# dimension, the start/end index is at the top/bottom edge of the
# corresponding tensor, modeled as a tree
def reduce_edge_list(l: List[bool]) -> None:
tally = True
for i in range(len(l)):
reversed_idx = -1 * (i + 1)
l[reversed_idx] &= tally
tally = l[reversed_idx]
if start_edges is None:
start_edges = [s == 0 for s in start]
reduce_edge_list(start_edges)
if end_edges is None:
end_edges = [e == (d - 1) for e, d in zip(end, dims)]
reduce_edge_list(end_edges)
# Base cases. Either start/end are empty and we're done, or the final,
# one-dimensional tensor can be simply sliced
if len(start) == 0:
return [()]
elif len(start) == 1:
return [(slice(start[0], end[0] + 1),)]
slices: List[Tuple[slice, ...]] = []
path_list: List[slice] = []
# Dimensions common to start and end can be selected directly
for s, e in zip(start, end):
if s == e:
path_list.append(slice(s, s + 1))
else:
break
path: Tuple[slice, ...] = tuple(path_list)
divergence_idx = len(path)
# start == end, and we're done
if divergence_idx == len(dims):
return [path]
def upper() -> Tuple[Tuple[slice, ...], ...]:
assert start_edges is not None
assert end_edges is not None
sdi = start[divergence_idx]
return tuple(
path + (slice(sdi, sdi + 1),) + s
for s in _get_minimal_slice_set(
start[divergence_idx + 1 :],
[d - 1 for d in dims[divergence_idx + 1 :]],
dims[divergence_idx + 1 :],
start_edges=start_edges[divergence_idx + 1 :],
end_edges=[True for _ in end_edges[divergence_idx + 1 :]],
)
)
def lower() -> Tuple[Tuple[slice, ...], ...]:
assert start_edges is not None
assert end_edges is not None
edi = end[divergence_idx]
return tuple(
path + (slice(edi, edi + 1),) + s
for s in _get_minimal_slice_set(
[0 for _ in start[divergence_idx + 1 :]],
end[divergence_idx + 1 :],
dims[divergence_idx + 1 :],
start_edges=[True for _ in start_edges[divergence_idx + 1 :]],
end_edges=end_edges[divergence_idx + 1 :],
)
)
# If both start and end are at the edges of the subtree rooted at
# divergence_idx, we can just select the whole subtree at once
if start_edges[divergence_idx] and end_edges[divergence_idx]:
slices.append(path + (slice(start[divergence_idx], end[divergence_idx] + 1),))
# If just start is at the edge, we can grab almost all of the subtree,
# treating only the ragged bottom edge as an edge case
elif start_edges[divergence_idx]:
slices.append(path + (slice(start[divergence_idx], end[divergence_idx]),))
slices.extend(lower())
# Analogous to the previous case, but the top is ragged this time
elif end_edges[divergence_idx]:
slices.extend(upper())
slices.append(path + (slice(start[divergence_idx] + 1, end[divergence_idx] + 1),))
# If both sides of the range are ragged, we need to handle both sides
# separately. If there's contiguous meat in between them, we can index it
# in one big chunk
else:
slices.extend(upper())
middle_ground = end[divergence_idx] - start[divergence_idx]
if middle_ground > 1:
slices.append(path + (slice(start[divergence_idx] + 1, end[divergence_idx]),))
slices.extend(lower())
return slices
@torch.jit.ignore
def _chunk_slice(t: torch.Tensor, flat_start: int, flat_end: int, no_batch_dims: int) -> torch.Tensor:
"""
Equivalent to
t.reshape((-1,) + t.shape[no_batch_dims:])[flat_start:flat_end]
but without the need for the initial reshape call, which can be memory-intensive in certain situations. The only
reshape operations in this function are performed on sub-tensors that scale with (flat_end - flat_start), the chunk
size.
"""
batch_dims = t.shape[:no_batch_dims]
start_idx = list(_flat_idx_to_idx(flat_start, batch_dims))
# _get_minimal_slice_set is inclusive
end_idx = list(_flat_idx_to_idx(flat_end - 1, batch_dims))
# Get an ordered list of slices to perform
slices = _get_minimal_slice_set(
start_idx,
end_idx,
batch_dims,
)
sliced_tensors = [t[s] for s in slices]
return torch.cat([s.view((-1,) + t.shape[no_batch_dims:]) for s in sliced_tensors])
def chunk_layer(
layer: Callable,
inputs: Dict[str, Any],
chunk_size: int,
no_batch_dims: int,
low_mem: bool = False,
_out: Any = None,
_add_into_out: bool = False,
) -> Any:
"""
Implements the "chunking" procedure described in section 1.11.8.
Layer outputs and inputs are assumed to be simple "pytrees," consisting only of (arbitrarily nested) lists, tuples,
and dicts with torch.Tensor leaves.
Args:
layer:
The layer to be applied chunk-wise
inputs:
A (non-nested) dictionary of keyworded inputs. All leaves must be tensors and must share the same batch
dimensions.
chunk_size:
The number of sub-batches per chunk. If multiple batch dimensions are specified, a "sub-batch" is defined
as a single indexing of all batch dimensions simultaneously (s.t. the number of sub-batches is the product
of the batch dimensions).
no_batch_dims:
How many of the initial dimensions of each input tensor can be considered batch dimensions.
low_mem:
Avoids flattening potentially large input tensors. Unnecessary in most cases, and is ever so slightly
slower than the default setting.
Returns:
The reassembled output of the layer on the inputs.
"""
if not (len(inputs) > 0):
raise ValueError("Must provide at least one input")
initial_dims = [shape[:no_batch_dims] for shape in _fetch_dims(inputs)]
orig_batch_dims = tuple([max(s) for s in zip(*initial_dims)])
def _prep_inputs(t: torch.Tensor) -> torch.Tensor:
if not low_mem:
if not sum(t.shape[:no_batch_dims]) == no_batch_dims:
t = t.expand(orig_batch_dims + t.shape[no_batch_dims:])
t = t.reshape(-1, *t.shape[no_batch_dims:])
else:
t = t.expand(orig_batch_dims + t.shape[no_batch_dims:])
return t
prepped_inputs: Dict[str, Any] = tensor_tree_map(_prep_inputs, inputs)
prepped_outputs = None
if _out is not None:
prepped_outputs = tensor_tree_map(lambda t: t.view([-1] + list(t.shape[no_batch_dims:])), _out)
flat_batch_dim = 1
for d in orig_batch_dims:
flat_batch_dim *= d
no_chunks = flat_batch_dim // chunk_size + (flat_batch_dim % chunk_size != 0)
def _select_chunk(t: torch.Tensor) -> torch.Tensor:
return t[i : i + chunk_size] if t.shape[0] != 1 else t
i = 0
out = prepped_outputs
for _ in range(no_chunks):
# Chunk the input
if not low_mem:
select_chunk = _select_chunk
else:
select_chunk = partial(
_chunk_slice,
flat_start=i,
flat_end=min(flat_batch_dim, i + chunk_size),
no_batch_dims=len(orig_batch_dims),
)
chunks: Dict[str, Any] = tensor_tree_map(select_chunk, prepped_inputs)
# Run the layer on the chunk
output_chunk = layer(**chunks)
# Allocate space for the output
if out is None:
out = tensor_tree_map(lambda t: t.new_zeros((flat_batch_dim,) + t.shape[1:]), output_chunk)
# Put the chunk in its pre-allocated space
if isinstance(output_chunk, dict):
def assign(d1: dict, d2: dict) -> None:
for k, v in d1.items():
if isinstance(v, dict):
assign(v, d2[k])
else:
if _add_into_out:
v[i : i + chunk_size] += d2[k]
else:
v[i : i + chunk_size] = d2[k]
assign(out, output_chunk)
elif isinstance(output_chunk, tuple):
for x1, x2 in zip(out, output_chunk):
if _add_into_out:
x1[i : i + chunk_size] += x2
else:
x1[i : i + chunk_size] = x2
elif isinstance(output_chunk, torch.Tensor):
if _add_into_out:
out[i : i + chunk_size] += output_chunk
else:
out[i : i + chunk_size] = output_chunk
else:
raise ValueError("Not supported")
i += chunk_size
out = tensor_tree_map(lambda t: t.view(orig_batch_dims + t.shape[1:]), out)
return out
class ChunkSizeTuner:
def __init__(
self,
# Heuristically, runtimes for most of the modules in the network
# plateau earlier than this on all GPUs I've run the model on.
max_chunk_size: int = 512,
):
self.max_chunk_size = max_chunk_size
self.cached_chunk_size: Optional[int] = None
self.cached_arg_data: Optional[tuple] = None
def _determine_favorable_chunk_size(self, fn: Callable, args: tuple, min_chunk_size: int) -> int:
logging.info("Tuning chunk size...")
if min_chunk_size >= self.max_chunk_size:
return min_chunk_size
candidates: List[int] = [2**l for l in range(int(math.log(self.max_chunk_size, 2)) + 1)]
candidates = [c for c in candidates if c > min_chunk_size]
candidates = [min_chunk_size] + candidates
candidates[-1] += 4
def test_chunk_size(chunk_size: int) -> bool:
try:
with torch.no_grad():
fn(*args, chunk_size=chunk_size)
return True
except RuntimeError:
return False
min_viable_chunk_size_index = 0
i = len(candidates) - 1
while i > min_viable_chunk_size_index:
viable = test_chunk_size(candidates[i])
if not viable:
i = (min_viable_chunk_size_index + i) // 2
else:
min_viable_chunk_size_index = i
i = (i + len(candidates) - 1) // 2
return candidates[min_viable_chunk_size_index]
def _compare_arg_caches(self, ac1: Iterable, ac2: Iterable) -> bool:
consistent = True
for a1, a2 in zip(ac1, ac2):
assert type(ac1) == type(ac2)
if isinstance(ac1, (list, tuple)):
consistent &= self._compare_arg_caches(a1, a2)
elif isinstance(ac1, dict):
a1_items = [v for _, v in sorted(a1.items(), key=lambda x: x[0])]
a2_items = [v for _, v in sorted(a2.items(), key=lambda x: x[0])]
consistent &= self._compare_arg_caches(a1_items, a2_items)
else:
consistent &= a1 == a2
return consistent
def tune_chunk_size(
self,
representative_fn: Callable,
args: tuple,
min_chunk_size: int,
) -> int:
consistent = True
arg_data: tuple = tree_map(lambda a: a.shape if isinstance(a, torch.Tensor) else a, args, object)
if self.cached_arg_data is not None:
# If args have changed shape/value, we need to re-tune
assert len(self.cached_arg_data) == len(arg_data)
consistent = self._compare_arg_caches(self.cached_arg_data, arg_data)
else:
# Otherwise, we can reuse the precomputed value
consistent = False
if not consistent:
self.cached_chunk_size = self._determine_favorable_chunk_size(
representative_fn,
args,
min_chunk_size,
)
self.cached_arg_data = arg_data
assert self.cached_chunk_size is not None
return self.cached_chunk_size
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/__init__.py | from .chunk_utils import chunk_layer
from .data_transforms import make_atom14_masks
from .feats import atom14_to_atom37, frames_and_literature_positions_to_atom14_pos, torsion_angles_to_frames
from .loss import compute_predicted_aligned_error, compute_tm
from .protein import Protein as OFProtein
from .protein import to_pdb
from .rigid_utils import Rigid, Rotation
from .tensor_utils import dict_multimap, flatten_final_dims, permute_final_dims
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/data_transforms.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Dict
import numpy as np
import torch
from . import residue_constants as rc
from .tensor_utils import tensor_tree_map, tree_map
def make_atom14_masks(protein: Dict[str, torch.Tensor]) -> Dict[str, torch.Tensor]:
"""Construct denser atom positions (14 dimensions instead of 37)."""
restype_atom14_to_atom37_list = []
restype_atom37_to_atom14_list = []
restype_atom14_mask_list = []
for rt in rc.restypes:
atom_names = rc.restype_name_to_atom14_names[rc.restype_1to3[rt]]
restype_atom14_to_atom37_list.append([(rc.atom_order[name] if name else 0) for name in atom_names])
atom_name_to_idx14 = {name: i for i, name in enumerate(atom_names)}
restype_atom37_to_atom14_list.append(
[(atom_name_to_idx14[name] if name in atom_name_to_idx14 else 0) for name in rc.atom_types]
)
restype_atom14_mask_list.append([(1.0 if name else 0.0) for name in atom_names])
# Add dummy mapping for restype 'UNK'
restype_atom14_to_atom37_list.append([0] * 14)
restype_atom37_to_atom14_list.append([0] * 37)
restype_atom14_mask_list.append([0.0] * 14)
restype_atom14_to_atom37 = torch.tensor(
restype_atom14_to_atom37_list,
dtype=torch.int32,
device=protein["aatype"].device,
)
restype_atom37_to_atom14 = torch.tensor(
restype_atom37_to_atom14_list,
dtype=torch.int32,
device=protein["aatype"].device,
)
restype_atom14_mask = torch.tensor(
restype_atom14_mask_list,
dtype=torch.float32,
device=protein["aatype"].device,
)
protein_aatype = protein["aatype"].to(torch.long)
# create the mapping for (residx, atom14) --> atom37, i.e. an array
# with shape (num_res, 14) containing the atom37 indices for this protein
residx_atom14_to_atom37 = restype_atom14_to_atom37[protein_aatype]
residx_atom14_mask = restype_atom14_mask[protein_aatype]
protein["atom14_atom_exists"] = residx_atom14_mask
protein["residx_atom14_to_atom37"] = residx_atom14_to_atom37.long()
# create the gather indices for mapping back
residx_atom37_to_atom14 = restype_atom37_to_atom14[protein_aatype]
protein["residx_atom37_to_atom14"] = residx_atom37_to_atom14.long()
# create the corresponding mask
restype_atom37_mask = torch.zeros([21, 37], dtype=torch.float32, device=protein["aatype"].device)
for restype, restype_letter in enumerate(rc.restypes):
restype_name = rc.restype_1to3[restype_letter]
atom_names = rc.residue_atoms[restype_name]
for atom_name in atom_names:
atom_type = rc.atom_order[atom_name]
restype_atom37_mask[restype, atom_type] = 1
residx_atom37_mask = restype_atom37_mask[protein_aatype]
protein["atom37_atom_exists"] = residx_atom37_mask
return protein
def make_atom14_masks_np(batch: Dict[str, torch.Tensor]) -> Dict[str, np.ndarray]:
batch = tree_map(lambda n: torch.tensor(n, device=batch["aatype"].device), batch, np.ndarray)
out = tensor_tree_map(lambda t: np.array(t), make_atom14_masks(batch))
return out
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/loss.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Dict, Optional, Tuple
import torch
def _calculate_bin_centers(boundaries: torch.Tensor) -> torch.Tensor:
step = boundaries[1] - boundaries[0]
bin_centers = boundaries + step / 2
bin_centers = torch.cat([bin_centers, (bin_centers[-1] + step).unsqueeze(-1)], dim=0)
return bin_centers
def _calculate_expected_aligned_error(
alignment_confidence_breaks: torch.Tensor,
aligned_distance_error_probs: torch.Tensor,
) -> Tuple[torch.Tensor, torch.Tensor]:
bin_centers = _calculate_bin_centers(alignment_confidence_breaks)
return (
torch.sum(aligned_distance_error_probs * bin_centers, dim=-1),
bin_centers[-1],
)
def compute_predicted_aligned_error(
logits: torch.Tensor,
max_bin: int = 31,
no_bins: int = 64,
**kwargs,
) -> Dict[str, torch.Tensor]:
"""Computes aligned confidence metrics from logits.
Args:
logits: [*, num_res, num_res, num_bins] the logits output from
PredictedAlignedErrorHead.
max_bin: Maximum bin value
no_bins: Number of bins
Returns:
aligned_confidence_probs: [*, num_res, num_res, num_bins] the predicted
aligned error probabilities over bins for each residue pair.
predicted_aligned_error: [*, num_res, num_res] the expected aligned distance
error for each pair of residues.
max_predicted_aligned_error: [*] the maximum predicted error possible.
"""
boundaries = torch.linspace(0, max_bin, steps=(no_bins - 1), device=logits.device)
aligned_confidence_probs = torch.nn.functional.softmax(logits, dim=-1)
predicted_aligned_error, max_predicted_aligned_error = _calculate_expected_aligned_error(
alignment_confidence_breaks=boundaries,
aligned_distance_error_probs=aligned_confidence_probs,
)
return {
"aligned_confidence_probs": aligned_confidence_probs,
"predicted_aligned_error": predicted_aligned_error,
"max_predicted_aligned_error": max_predicted_aligned_error,
}
def compute_tm(
logits: torch.Tensor,
residue_weights: Optional[torch.Tensor] = None,
max_bin: int = 31,
no_bins: int = 64,
eps: float = 1e-8,
**kwargs,
) -> torch.Tensor:
if residue_weights is None:
residue_weights = logits.new_ones(logits.shape[-2])
boundaries = torch.linspace(0, max_bin, steps=(no_bins - 1), device=logits.device)
bin_centers = _calculate_bin_centers(boundaries)
torch.sum(residue_weights)
n = logits.shape[-2]
clipped_n = max(n, 19)
d0 = 1.24 * (clipped_n - 15) ** (1.0 / 3) - 1.8
probs = torch.nn.functional.softmax(logits, dim=-1)
tm_per_bin = 1.0 / (1 + (bin_centers**2) / (d0**2))
predicted_tm_term = torch.sum(probs * tm_per_bin, dim=-1)
normed_residue_mask = residue_weights / (eps + residue_weights.sum())
per_alignment = torch.sum(predicted_tm_term * normed_residue_mask, dim=-1)
weighted = per_alignment * residue_weights
argmax = (weighted == torch.max(weighted)).nonzero()[0]
return per_alignment[tuple(argmax)]
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/tensor_utils.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from functools import partial
from typing import Any, Callable, Dict, List, Type, TypeVar, Union, overload
import torch
import torch.nn as nn
import torch.types
def add(m1: torch.Tensor, m2: torch.Tensor, inplace: bool) -> torch.Tensor:
# The first operation in a checkpoint can't be in-place, but it's
# nice to have in-place addition during inference. Thus...
if not inplace:
m1 = m1 + m2
else:
m1 += m2
return m1
def permute_final_dims(tensor: torch.Tensor, inds: List[int]) -> torch.Tensor:
zero_index = -1 * len(inds)
first_inds = list(range(len(tensor.shape[:zero_index])))
return tensor.permute(first_inds + [zero_index + i for i in inds])
def flatten_final_dims(t: torch.Tensor, no_dims: int) -> torch.Tensor:
return t.reshape(t.shape[:-no_dims] + (-1,))
def masked_mean(mask: torch.Tensor, value: torch.Tensor, dim: int, eps: float = 1e-4) -> torch.Tensor:
mask = mask.expand(*value.shape)
return torch.sum(mask * value, dim=dim) / (eps + torch.sum(mask, dim=dim))
def pts_to_distogram(
pts: torch.Tensor, min_bin: torch.types.Number = 2.3125, max_bin: torch.types.Number = 21.6875, no_bins: int = 64
) -> torch.Tensor:
boundaries = torch.linspace(min_bin, max_bin, no_bins - 1, device=pts.device)
dists = torch.sqrt(torch.sum((pts.unsqueeze(-2) - pts.unsqueeze(-3)) ** 2, dim=-1))
return torch.bucketize(dists, boundaries)
def dict_multimap(fn: Callable[[list], Any], dicts: List[dict]) -> dict:
first = dicts[0]
new_dict = {}
for k, v in first.items():
all_v = [d[k] for d in dicts]
if isinstance(v, dict):
new_dict[k] = dict_multimap(fn, all_v)
else:
new_dict[k] = fn(all_v)
return new_dict
def one_hot(x: torch.Tensor, v_bins: torch.Tensor) -> torch.Tensor:
reshaped_bins = v_bins.view(((1,) * len(x.shape)) + (len(v_bins),))
diffs = x[..., None] - reshaped_bins
am = torch.argmin(torch.abs(diffs), dim=-1)
return nn.functional.one_hot(am, num_classes=len(v_bins)).float()
def batched_gather(data: torch.Tensor, inds: torch.Tensor, dim: int = 0, no_batch_dims: int = 0) -> torch.Tensor:
ranges: List[Union[slice, torch.Tensor]] = []
for i, s in enumerate(data.shape[:no_batch_dims]):
r = torch.arange(s)
r = r.view(*(*((1,) * i), -1, *((1,) * (len(inds.shape) - i - 1))))
ranges.append(r)
remaining_dims: List[Union[slice, torch.Tensor]] = [slice(None) for _ in range(len(data.shape) - no_batch_dims)]
remaining_dims[dim - no_batch_dims if dim >= 0 else dim] = inds
ranges.extend(remaining_dims)
# Matt note: Editing this to get around the behaviour of using a list as an array index changing
# in recent Numpy versions
return data[tuple(ranges)]
T = TypeVar("T")
# With tree_map, a poor man's JAX tree_map
def dict_map(
fn: Callable[[T], Any], dic: Dict[Any, Union[dict, list, tuple, T]], leaf_type: Type[T]
) -> Dict[Any, Union[dict, list, tuple, Any]]:
new_dict: Dict[Any, Union[dict, list, tuple, Any]] = {}
for k, v in dic.items():
if isinstance(v, dict):
new_dict[k] = dict_map(fn, v, leaf_type)
else:
new_dict[k] = tree_map(fn, v, leaf_type)
return new_dict
@overload
def tree_map(fn: Callable[[T], Any], tree: T, leaf_type: Type[T]) -> Any:
...
@overload
def tree_map(fn: Callable[[T], Any], tree: dict, leaf_type: Type[T]) -> dict:
...
@overload
def tree_map(fn: Callable[[T], Any], tree: list, leaf_type: Type[T]) -> list:
...
@overload
def tree_map(fn: Callable[[T], Any], tree: tuple, leaf_type: Type[T]) -> tuple:
...
def tree_map(fn, tree, leaf_type):
if isinstance(tree, dict):
return dict_map(fn, tree, leaf_type)
elif isinstance(tree, list):
return [tree_map(fn, x, leaf_type) for x in tree]
elif isinstance(tree, tuple):
return tuple(tree_map(fn, x, leaf_type) for x in tree)
elif isinstance(tree, leaf_type):
return fn(tree)
else:
print(type(tree))
raise ValueError("Not supported")
tensor_tree_map = partial(tree_map, leaf_type=torch.Tensor)
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/protein.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Protein data type."""
import dataclasses
import re
import string
from typing import Any, Dict, Iterator, List, Mapping, Optional, Sequence, Tuple
import numpy as np
from . import residue_constants
FeatureDict = Mapping[str, np.ndarray]
ModelOutput = Mapping[str, Any] # Is a nested dict.
PICO_TO_ANGSTROM = 0.01
@dataclasses.dataclass(frozen=True)
class Protein:
"""Protein structure representation."""
# Cartesian coordinates of atoms in angstroms. The atom types correspond to
# residue_constants.atom_types, i.e. the first three are N, CA, CB.
atom_positions: np.ndarray # [num_res, num_atom_type, 3]
# Amino-acid type for each residue represented as an integer between 0 and
# 20, where 20 is 'X'.
aatype: np.ndarray # [num_res]
# Binary float mask to indicate presence of a particular atom. 1.0 if an atom
# is present and 0.0 if not. This should be used for loss masking.
atom_mask: np.ndarray # [num_res, num_atom_type]
# Residue index as used in PDB. It is not necessarily continuous or 0-indexed.
residue_index: np.ndarray # [num_res]
# B-factors, or temperature factors, of each residue (in sq. angstroms units),
# representing the displacement of the residue from its ground truth mean
# value.
b_factors: np.ndarray # [num_res, num_atom_type]
# Chain indices for multi-chain predictions
chain_index: Optional[np.ndarray] = None
# Optional remark about the protein. Included as a comment in output PDB
# files
remark: Optional[str] = None
# Templates used to generate this protein (prediction-only)
parents: Optional[Sequence[str]] = None
# Chain corresponding to each parent
parents_chain_index: Optional[Sequence[int]] = None
def from_proteinnet_string(proteinnet_str: str) -> Protein:
tag_re = r"(\[[A-Z]+\]\n)"
tags: List[str] = [tag.strip() for tag in re.split(tag_re, proteinnet_str) if len(tag) > 0]
groups: Iterator[Tuple[str, List[str]]] = zip(tags[0::2], [l.split("\n") for l in tags[1::2]])
atoms: List[str] = ["N", "CA", "C"]
aatype = None
atom_positions = None
atom_mask = None
for g in groups:
if "[PRIMARY]" == g[0]:
seq = g[1][0].strip()
for i in range(len(seq)):
if seq[i] not in residue_constants.restypes:
seq[i] = "X" # FIXME: strings are immutable
aatype = np.array(
[residue_constants.restype_order.get(res_symbol, residue_constants.restype_num) for res_symbol in seq]
)
elif "[TERTIARY]" == g[0]:
tertiary: List[List[float]] = []
for axis in range(3):
tertiary.append(list(map(float, g[1][axis].split())))
tertiary_np = np.array(tertiary)
atom_positions = np.zeros((len(tertiary[0]) // 3, residue_constants.atom_type_num, 3)).astype(np.float32)
for i, atom in enumerate(atoms):
atom_positions[:, residue_constants.atom_order[atom], :] = np.transpose(tertiary_np[:, i::3])
atom_positions *= PICO_TO_ANGSTROM
elif "[MASK]" == g[0]:
mask = np.array(list(map({"-": 0, "+": 1}.get, g[1][0].strip())))
atom_mask = np.zeros(
(
len(mask),
residue_constants.atom_type_num,
)
).astype(np.float32)
for i, atom in enumerate(atoms):
atom_mask[:, residue_constants.atom_order[atom]] = 1
atom_mask *= mask[..., None]
assert aatype is not None
return Protein(
atom_positions=atom_positions,
atom_mask=atom_mask,
aatype=aatype,
residue_index=np.arange(len(aatype)),
b_factors=None,
)
def get_pdb_headers(prot: Protein, chain_id: int = 0) -> List[str]:
pdb_headers: List[str] = []
remark = prot.remark
if remark is not None:
pdb_headers.append(f"REMARK {remark}")
parents = prot.parents
parents_chain_index = prot.parents_chain_index
if parents is not None and parents_chain_index is not None:
parents = [p for i, p in zip(parents_chain_index, parents) if i == chain_id]
if parents is None or len(parents) == 0:
parents = ["N/A"]
pdb_headers.append(f"PARENT {' '.join(parents)}")
return pdb_headers
def add_pdb_headers(prot: Protein, pdb_str: str) -> str:
"""Add pdb headers to an existing PDB string. Useful during multi-chain
recycling
"""
out_pdb_lines: List[str] = []
lines = pdb_str.split("\n")
remark = prot.remark
if remark is not None:
out_pdb_lines.append(f"REMARK {remark}")
parents_per_chain: List[List[str]]
if prot.parents is not None and len(prot.parents) > 0:
parents_per_chain = []
if prot.parents_chain_index is not None:
parent_dict: Dict[str, List[str]] = {}
for p, i in zip(prot.parents, prot.parents_chain_index):
parent_dict.setdefault(str(i), [])
parent_dict[str(i)].append(p)
max_idx = max([int(chain_idx) for chain_idx in parent_dict])
for i in range(max_idx + 1):
chain_parents = parent_dict.get(str(i), ["N/A"])
parents_per_chain.append(chain_parents)
else:
parents_per_chain.append(list(prot.parents))
else:
parents_per_chain = [["N/A"]]
def make_parent_line(p: Sequence[str]) -> str:
return f"PARENT {' '.join(p)}"
out_pdb_lines.append(make_parent_line(parents_per_chain[0]))
chain_counter = 0
for i, l in enumerate(lines):
if "PARENT" not in l and "REMARK" not in l:
out_pdb_lines.append(l)
if "TER" in l and "END" not in lines[i + 1]:
chain_counter += 1
if not chain_counter >= len(parents_per_chain):
chain_parents = parents_per_chain[chain_counter]
else:
chain_parents = ["N/A"]
out_pdb_lines.append(make_parent_line(chain_parents))
return "\n".join(out_pdb_lines)
def to_pdb(prot: Protein) -> str:
"""Converts a `Protein` instance to a PDB string.
Args:
prot: The protein to convert to PDB.
Returns:
PDB string.
"""
restypes = residue_constants.restypes + ["X"]
def res_1to3(r: int) -> str:
return residue_constants.restype_1to3.get(restypes[r], "UNK")
atom_types = residue_constants.atom_types
pdb_lines: List[str] = []
atom_mask = prot.atom_mask
aatype = prot.aatype
atom_positions = prot.atom_positions
residue_index = prot.residue_index.astype(np.int32)
b_factors = prot.b_factors
chain_index = prot.chain_index
if np.any(aatype > residue_constants.restype_num):
raise ValueError("Invalid aatypes.")
headers = get_pdb_headers(prot)
if len(headers) > 0:
pdb_lines.extend(headers)
n = aatype.shape[0]
atom_index = 1
prev_chain_index = 0
chain_tags = string.ascii_uppercase
chain_tag = None
# Add all atom sites.
for i in range(n):
res_name_3 = res_1to3(aatype[i])
for atom_name, pos, mask, b_factor in zip(atom_types, atom_positions[i], atom_mask[i], b_factors[i]):
if mask < 0.5:
continue
record_type = "ATOM"
name = atom_name if len(atom_name) == 4 else f" {atom_name}"
alt_loc = ""
insertion_code = ""
occupancy = 1.00
element = atom_name[0] # Protein supports only C, N, O, S, this works.
charge = ""
chain_tag = "A"
if chain_index is not None:
chain_tag = chain_tags[chain_index[i]]
# PDB is a columnar format, every space matters here!
atom_line = (
f"{record_type:<6}{atom_index:>5} {name:<4}{alt_loc:>1}"
f"{res_name_3:>3} {chain_tag:>1}"
f"{residue_index[i]:>4}{insertion_code:>1} "
f"{pos[0]:>8.3f}{pos[1]:>8.3f}{pos[2]:>8.3f}"
f"{occupancy:>6.2f}{b_factor:>6.2f} "
f"{element:>2}{charge:>2}"
)
pdb_lines.append(atom_line)
atom_index += 1
should_terminate = i == n - 1
if chain_index is not None:
if i != n - 1 and chain_index[i + 1] != prev_chain_index:
should_terminate = True
prev_chain_index = chain_index[i + 1]
if should_terminate:
# Close the chain.
chain_end = "TER"
chain_termination_line = (
f"{chain_end:<6}{atom_index:>5} {res_1to3(aatype[i]):>3} {chain_tag:>1}{residue_index[i]:>4}"
)
pdb_lines.append(chain_termination_line)
atom_index += 1
if i != n - 1:
# "prev" is a misnomer here. This happens at the beginning of
# each new chain.
pdb_lines.extend(get_pdb_headers(prot, prev_chain_index))
pdb_lines.append("END")
pdb_lines.append("")
return "\n".join(pdb_lines)
def ideal_atom_mask(prot: Protein) -> np.ndarray:
"""Computes an ideal atom mask.
`Protein.atom_mask` typically is defined according to the atoms that are reported in the PDB. This function
computes a mask according to heavy atoms that should be present in the given sequence of amino acids.
Args:
prot: `Protein` whose fields are `numpy.ndarray` objects.
Returns:
An ideal atom mask.
"""
return residue_constants.STANDARD_ATOM_MASK[prot.aatype]
def from_prediction(
features: FeatureDict,
result: ModelOutput,
b_factors: Optional[np.ndarray] = None,
chain_index: Optional[np.ndarray] = None,
remark: Optional[str] = None,
parents: Optional[Sequence[str]] = None,
parents_chain_index: Optional[Sequence[int]] = None,
) -> Protein:
"""Assembles a protein from a prediction.
Args:
features: Dictionary holding model inputs.
result: Dictionary holding model outputs.
b_factors: (Optional) B-factors to use for the protein.
chain_index: (Optional) Chain indices for multi-chain predictions
remark: (Optional) Remark about the prediction
parents: (Optional) List of template names
Returns:
A protein instance.
"""
return Protein(
aatype=features["aatype"],
atom_positions=result["final_atom_positions"],
atom_mask=result["final_atom_mask"],
residue_index=features["residue_index"] + 1,
b_factors=b_factors if b_factors is not None else np.zeros_like(result["final_atom_mask"]),
chain_index=chain_index,
remark=remark,
parents=parents,
parents_chain_index=parents_chain_index,
)
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/residue_constants.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Constants used in AlphaFold."""
import collections
import copy
import functools
from importlib import resources
from typing import Dict, List, Mapping, Sequence, Tuple
import numpy as np
# Internal import (35fd).
# Distance from one CA to next CA [trans configuration: omega = 180].
ca_ca = 3.80209737096
# Format: The list for each AA type contains chi1, chi2, chi3, chi4 in
# this order (or a relevant subset from chi1 onwards). ALA and GLY don't have
# chi angles so their chi angle lists are empty.
chi_angles_atoms: Dict[str, List[List[str]]] = {
"ALA": [],
# Chi5 in arginine is always 0 +- 5 degrees, so ignore it.
"ARG": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD"], ["CB", "CG", "CD", "NE"], ["CG", "CD", "NE", "CZ"]],
"ASN": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "OD1"]],
"ASP": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "OD1"]],
"CYS": [["N", "CA", "CB", "SG"]],
"GLN": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD"], ["CB", "CG", "CD", "OE1"]],
"GLU": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD"], ["CB", "CG", "CD", "OE1"]],
"GLY": [],
"HIS": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "ND1"]],
"ILE": [["N", "CA", "CB", "CG1"], ["CA", "CB", "CG1", "CD1"]],
"LEU": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD1"]],
"LYS": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD"], ["CB", "CG", "CD", "CE"], ["CG", "CD", "CE", "NZ"]],
"MET": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "SD"], ["CB", "CG", "SD", "CE"]],
"PHE": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD1"]],
"PRO": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD"]],
"SER": [["N", "CA", "CB", "OG"]],
"THR": [["N", "CA", "CB", "OG1"]],
"TRP": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD1"]],
"TYR": [["N", "CA", "CB", "CG"], ["CA", "CB", "CG", "CD1"]],
"VAL": [["N", "CA", "CB", "CG1"]],
}
# If chi angles given in fixed-length array, this matrix determines how to mask
# them for each AA type. The order is as per restype_order (see below).
chi_angles_mask: List[List[float]] = [
[0.0, 0.0, 0.0, 0.0], # ALA
[1.0, 1.0, 1.0, 1.0], # ARG
[1.0, 1.0, 0.0, 0.0], # ASN
[1.0, 1.0, 0.0, 0.0], # ASP
[1.0, 0.0, 0.0, 0.0], # CYS
[1.0, 1.0, 1.0, 0.0], # GLN
[1.0, 1.0, 1.0, 0.0], # GLU
[0.0, 0.0, 0.0, 0.0], # GLY
[1.0, 1.0, 0.0, 0.0], # HIS
[1.0, 1.0, 0.0, 0.0], # ILE
[1.0, 1.0, 0.0, 0.0], # LEU
[1.0, 1.0, 1.0, 1.0], # LYS
[1.0, 1.0, 1.0, 0.0], # MET
[1.0, 1.0, 0.0, 0.0], # PHE
[1.0, 1.0, 0.0, 0.0], # PRO
[1.0, 0.0, 0.0, 0.0], # SER
[1.0, 0.0, 0.0, 0.0], # THR
[1.0, 1.0, 0.0, 0.0], # TRP
[1.0, 1.0, 0.0, 0.0], # TYR
[1.0, 0.0, 0.0, 0.0], # VAL
]
# The following chi angles are pi periodic: they can be rotated by a multiple
# of pi without affecting the structure.
chi_pi_periodic: List[List[float]] = [
[0.0, 0.0, 0.0, 0.0], # ALA
[0.0, 0.0, 0.0, 0.0], # ARG
[0.0, 0.0, 0.0, 0.0], # ASN
[0.0, 1.0, 0.0, 0.0], # ASP
[0.0, 0.0, 0.0, 0.0], # CYS
[0.0, 0.0, 0.0, 0.0], # GLN
[0.0, 0.0, 1.0, 0.0], # GLU
[0.0, 0.0, 0.0, 0.0], # GLY
[0.0, 0.0, 0.0, 0.0], # HIS
[0.0, 0.0, 0.0, 0.0], # ILE
[0.0, 0.0, 0.0, 0.0], # LEU
[0.0, 0.0, 0.0, 0.0], # LYS
[0.0, 0.0, 0.0, 0.0], # MET
[0.0, 1.0, 0.0, 0.0], # PHE
[0.0, 0.0, 0.0, 0.0], # PRO
[0.0, 0.0, 0.0, 0.0], # SER
[0.0, 0.0, 0.0, 0.0], # THR
[0.0, 0.0, 0.0, 0.0], # TRP
[0.0, 1.0, 0.0, 0.0], # TYR
[0.0, 0.0, 0.0, 0.0], # VAL
[0.0, 0.0, 0.0, 0.0], # UNK
]
# Atoms positions relative to the 8 rigid groups, defined by the pre-omega, phi,
# psi and chi angles:
# 0: 'backbone group',
# 1: 'pre-omega-group', (empty)
# 2: 'phi-group', (currently empty, because it defines only hydrogens)
# 3: 'psi-group',
# 4,5,6,7: 'chi1,2,3,4-group'
# The atom positions are relative to the axis-end-atom of the corresponding
# rotation axis. The x-axis is in direction of the rotation axis, and the y-axis
# is defined such that the dihedral-angle-definiting atom (the last entry in
# chi_angles_atoms above) is in the xy-plane (with a positive y-coordinate).
# format: [atomname, group_idx, rel_position]
rigid_group_atom_positions: Dict[str, List[Tuple[str, int, Tuple[float, float, float]]]] = {
"ALA": [
("N", 0, (-0.525, 1.363, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, -0.000, -0.000)),
("CB", 0, (-0.529, -0.774, -1.205)),
("O", 3, (0.627, 1.062, 0.000)),
],
"ARG": [
("N", 0, (-0.524, 1.362, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, -0.000, -0.000)),
("CB", 0, (-0.524, -0.778, -1.209)),
("O", 3, (0.626, 1.062, 0.000)),
("CG", 4, (0.616, 1.390, -0.000)),
("CD", 5, (0.564, 1.414, 0.000)),
("NE", 6, (0.539, 1.357, -0.000)),
("NH1", 7, (0.206, 2.301, 0.000)),
("NH2", 7, (2.078, 0.978, -0.000)),
("CZ", 7, (0.758, 1.093, -0.000)),
],
"ASN": [
("N", 0, (-0.536, 1.357, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, -0.000, -0.000)),
("CB", 0, (-0.531, -0.787, -1.200)),
("O", 3, (0.625, 1.062, 0.000)),
("CG", 4, (0.584, 1.399, 0.000)),
("ND2", 5, (0.593, -1.188, 0.001)),
("OD1", 5, (0.633, 1.059, 0.000)),
],
"ASP": [
("N", 0, (-0.525, 1.362, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.527, 0.000, -0.000)),
("CB", 0, (-0.526, -0.778, -1.208)),
("O", 3, (0.626, 1.062, -0.000)),
("CG", 4, (0.593, 1.398, -0.000)),
("OD1", 5, (0.610, 1.091, 0.000)),
("OD2", 5, (0.592, -1.101, -0.003)),
],
"CYS": [
("N", 0, (-0.522, 1.362, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.524, 0.000, 0.000)),
("CB", 0, (-0.519, -0.773, -1.212)),
("O", 3, (0.625, 1.062, -0.000)),
("SG", 4, (0.728, 1.653, 0.000)),
],
"GLN": [
("N", 0, (-0.526, 1.361, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, 0.000, 0.000)),
("CB", 0, (-0.525, -0.779, -1.207)),
("O", 3, (0.626, 1.062, -0.000)),
("CG", 4, (0.615, 1.393, 0.000)),
("CD", 5, (0.587, 1.399, -0.000)),
("NE2", 6, (0.593, -1.189, -0.001)),
("OE1", 6, (0.634, 1.060, 0.000)),
],
"GLU": [
("N", 0, (-0.528, 1.361, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, -0.000, -0.000)),
("CB", 0, (-0.526, -0.781, -1.207)),
("O", 3, (0.626, 1.062, 0.000)),
("CG", 4, (0.615, 1.392, 0.000)),
("CD", 5, (0.600, 1.397, 0.000)),
("OE1", 6, (0.607, 1.095, -0.000)),
("OE2", 6, (0.589, -1.104, -0.001)),
],
"GLY": [
("N", 0, (-0.572, 1.337, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.517, -0.000, -0.000)),
("O", 3, (0.626, 1.062, -0.000)),
],
"HIS": [
("N", 0, (-0.527, 1.360, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, 0.000, 0.000)),
("CB", 0, (-0.525, -0.778, -1.208)),
("O", 3, (0.625, 1.063, 0.000)),
("CG", 4, (0.600, 1.370, -0.000)),
("CD2", 5, (0.889, -1.021, 0.003)),
("ND1", 5, (0.744, 1.160, -0.000)),
("CE1", 5, (2.030, 0.851, 0.002)),
("NE2", 5, (2.145, -0.466, 0.004)),
],
"ILE": [
("N", 0, (-0.493, 1.373, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.527, -0.000, -0.000)),
("CB", 0, (-0.536, -0.793, -1.213)),
("O", 3, (0.627, 1.062, -0.000)),
("CG1", 4, (0.534, 1.437, -0.000)),
("CG2", 4, (0.540, -0.785, -1.199)),
("CD1", 5, (0.619, 1.391, 0.000)),
],
"LEU": [
("N", 0, (-0.520, 1.363, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, -0.000, -0.000)),
("CB", 0, (-0.522, -0.773, -1.214)),
("O", 3, (0.625, 1.063, -0.000)),
("CG", 4, (0.678, 1.371, 0.000)),
("CD1", 5, (0.530, 1.430, -0.000)),
("CD2", 5, (0.535, -0.774, 1.200)),
],
"LYS": [
("N", 0, (-0.526, 1.362, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, 0.000, 0.000)),
("CB", 0, (-0.524, -0.778, -1.208)),
("O", 3, (0.626, 1.062, -0.000)),
("CG", 4, (0.619, 1.390, 0.000)),
("CD", 5, (0.559, 1.417, 0.000)),
("CE", 6, (0.560, 1.416, 0.000)),
("NZ", 7, (0.554, 1.387, 0.000)),
],
"MET": [
("N", 0, (-0.521, 1.364, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, 0.000, 0.000)),
("CB", 0, (-0.523, -0.776, -1.210)),
("O", 3, (0.625, 1.062, -0.000)),
("CG", 4, (0.613, 1.391, -0.000)),
("SD", 5, (0.703, 1.695, 0.000)),
("CE", 6, (0.320, 1.786, -0.000)),
],
"PHE": [
("N", 0, (-0.518, 1.363, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.524, 0.000, -0.000)),
("CB", 0, (-0.525, -0.776, -1.212)),
("O", 3, (0.626, 1.062, -0.000)),
("CG", 4, (0.607, 1.377, 0.000)),
("CD1", 5, (0.709, 1.195, -0.000)),
("CD2", 5, (0.706, -1.196, 0.000)),
("CE1", 5, (2.102, 1.198, -0.000)),
("CE2", 5, (2.098, -1.201, -0.000)),
("CZ", 5, (2.794, -0.003, -0.001)),
],
"PRO": [
("N", 0, (-0.566, 1.351, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.527, -0.000, 0.000)),
("CB", 0, (-0.546, -0.611, -1.293)),
("O", 3, (0.621, 1.066, 0.000)),
("CG", 4, (0.382, 1.445, 0.0)),
# ('CD', 5, (0.427, 1.440, 0.0)),
("CD", 5, (0.477, 1.424, 0.0)), # manually made angle 2 degrees larger
],
"SER": [
("N", 0, (-0.529, 1.360, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, -0.000, -0.000)),
("CB", 0, (-0.518, -0.777, -1.211)),
("O", 3, (0.626, 1.062, -0.000)),
("OG", 4, (0.503, 1.325, 0.000)),
],
"THR": [
("N", 0, (-0.517, 1.364, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.526, 0.000, -0.000)),
("CB", 0, (-0.516, -0.793, -1.215)),
("O", 3, (0.626, 1.062, 0.000)),
("CG2", 4, (0.550, -0.718, -1.228)),
("OG1", 4, (0.472, 1.353, 0.000)),
],
"TRP": [
("N", 0, (-0.521, 1.363, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.525, -0.000, 0.000)),
("CB", 0, (-0.523, -0.776, -1.212)),
("O", 3, (0.627, 1.062, 0.000)),
("CG", 4, (0.609, 1.370, -0.000)),
("CD1", 5, (0.824, 1.091, 0.000)),
("CD2", 5, (0.854, -1.148, -0.005)),
("CE2", 5, (2.186, -0.678, -0.007)),
("CE3", 5, (0.622, -2.530, -0.007)),
("NE1", 5, (2.140, 0.690, -0.004)),
("CH2", 5, (3.028, -2.890, -0.013)),
("CZ2", 5, (3.283, -1.543, -0.011)),
("CZ3", 5, (1.715, -3.389, -0.011)),
],
"TYR": [
("N", 0, (-0.522, 1.362, 0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.524, -0.000, -0.000)),
("CB", 0, (-0.522, -0.776, -1.213)),
("O", 3, (0.627, 1.062, -0.000)),
("CG", 4, (0.607, 1.382, -0.000)),
("CD1", 5, (0.716, 1.195, -0.000)),
("CD2", 5, (0.713, -1.194, -0.001)),
("CE1", 5, (2.107, 1.200, -0.002)),
("CE2", 5, (2.104, -1.201, -0.003)),
("OH", 5, (4.168, -0.002, -0.005)),
("CZ", 5, (2.791, -0.001, -0.003)),
],
"VAL": [
("N", 0, (-0.494, 1.373, -0.000)),
("CA", 0, (0.000, 0.000, 0.000)),
("C", 0, (1.527, -0.000, -0.000)),
("CB", 0, (-0.533, -0.795, -1.213)),
("O", 3, (0.627, 1.062, -0.000)),
("CG1", 4, (0.540, 1.429, -0.000)),
("CG2", 4, (0.533, -0.776, 1.203)),
],
}
# A list of atoms (excluding hydrogen) for each AA type. PDB naming convention.
residue_atoms: Dict[str, List[str]] = {
"ALA": ["C", "CA", "CB", "N", "O"],
"ARG": ["C", "CA", "CB", "CG", "CD", "CZ", "N", "NE", "O", "NH1", "NH2"],
"ASP": ["C", "CA", "CB", "CG", "N", "O", "OD1", "OD2"],
"ASN": ["C", "CA", "CB", "CG", "N", "ND2", "O", "OD1"],
"CYS": ["C", "CA", "CB", "N", "O", "SG"],
"GLU": ["C", "CA", "CB", "CG", "CD", "N", "O", "OE1", "OE2"],
"GLN": ["C", "CA", "CB", "CG", "CD", "N", "NE2", "O", "OE1"],
"GLY": ["C", "CA", "N", "O"],
"HIS": ["C", "CA", "CB", "CG", "CD2", "CE1", "N", "ND1", "NE2", "O"],
"ILE": ["C", "CA", "CB", "CG1", "CG2", "CD1", "N", "O"],
"LEU": ["C", "CA", "CB", "CG", "CD1", "CD2", "N", "O"],
"LYS": ["C", "CA", "CB", "CG", "CD", "CE", "N", "NZ", "O"],
"MET": ["C", "CA", "CB", "CG", "CE", "N", "O", "SD"],
"PHE": ["C", "CA", "CB", "CG", "CD1", "CD2", "CE1", "CE2", "CZ", "N", "O"],
"PRO": ["C", "CA", "CB", "CG", "CD", "N", "O"],
"SER": ["C", "CA", "CB", "N", "O", "OG"],
"THR": ["C", "CA", "CB", "CG2", "N", "O", "OG1"],
"TRP": ["C", "CA", "CB", "CG", "CD1", "CD2", "CE2", "CE3", "CZ2", "CZ3", "CH2", "N", "NE1", "O"],
"TYR": ["C", "CA", "CB", "CG", "CD1", "CD2", "CE1", "CE2", "CZ", "N", "O", "OH"],
"VAL": ["C", "CA", "CB", "CG1", "CG2", "N", "O"],
}
# Naming swaps for ambiguous atom names.
# Due to symmetries in the amino acids the naming of atoms is ambiguous in
# 4 of the 20 amino acids.
# (The LDDT paper lists 7 amino acids as ambiguous, but the naming ambiguities
# in LEU, VAL and ARG can be resolved by using the 3d constellations of
# the 'ambiguous' atoms and their neighbours)
# TODO: ^ interpret this
residue_atom_renaming_swaps: Dict[str, Dict[str, str]] = {
"ASP": {"OD1": "OD2"},
"GLU": {"OE1": "OE2"},
"PHE": {"CD1": "CD2", "CE1": "CE2"},
"TYR": {"CD1": "CD2", "CE1": "CE2"},
}
# Van der Waals radii [Angstroem] of the atoms (from Wikipedia)
van_der_waals_radius: Dict[str, float] = {
"C": 1.7,
"N": 1.55,
"O": 1.52,
"S": 1.8,
}
Bond = collections.namedtuple("Bond", ["atom1_name", "atom2_name", "length", "stddev"])
BondAngle = collections.namedtuple(
"BondAngle",
["atom1_name", "atom2_name", "atom3name", "angle_rad", "stddev"],
)
def map_structure_with_atom_order(in_list: list, first_call: bool = True) -> list:
# Maps strings in a nested list structure to their corresponding index in atom_order
if first_call:
in_list = copy.deepcopy(in_list)
for i in range(len(in_list)):
if isinstance(in_list[i], list):
in_list[i] = map_structure_with_atom_order(in_list[i], first_call=False)
elif isinstance(in_list[i], str):
in_list[i] = atom_order[in_list[i]]
else:
raise ValueError("Unexpected type when mapping nested lists!")
return in_list
@functools.lru_cache(maxsize=None)
def load_stereo_chemical_props() -> (
Tuple[
Mapping[str, List[Bond]],
Mapping[str, List[Bond]],
Mapping[str, List[BondAngle]],
]
):
"""Load stereo_chemical_props.txt into a nice structure.
Load literature values for bond lengths and bond angles and translate bond angles into the length of the opposite
edge of the triangle ("residue_virtual_bonds").
Returns:
residue_bonds: dict that maps resname --> list of Bond tuples residue_virtual_bonds: dict that maps resname -->
list of Bond tuples residue_bond_angles: dict that maps resname --> list of BondAngle tuples
"""
# TODO: this file should be downloaded in a setup script
stereo_chemical_props = resources.read_text("openfold.resources", "stereo_chemical_props.txt")
lines_iter = iter(stereo_chemical_props.splitlines())
# Load bond lengths.
residue_bonds: Dict[str, List[Bond]] = {}
next(lines_iter) # Skip header line.
for line in lines_iter:
if line.strip() == "-":
break
bond, resname, bond_length, stddev = line.split()
atom1, atom2 = bond.split("-")
if resname not in residue_bonds:
residue_bonds[resname] = []
residue_bonds[resname].append(Bond(atom1, atom2, float(bond_length), float(stddev)))
residue_bonds["UNK"] = []
# Load bond angles.
residue_bond_angles: Dict[str, List[BondAngle]] = {}
next(lines_iter) # Skip empty line.
next(lines_iter) # Skip header line.
for line in lines_iter:
if line.strip() == "-":
break
bond, resname, angle_degree, stddev_degree = line.split()
atom1, atom2, atom3 = bond.split("-")
if resname not in residue_bond_angles:
residue_bond_angles[resname] = []
residue_bond_angles[resname].append(
BondAngle(
atom1,
atom2,
atom3,
float(angle_degree) / 180.0 * np.pi,
float(stddev_degree) / 180.0 * np.pi,
)
)
residue_bond_angles["UNK"] = []
def make_bond_key(atom1_name: str, atom2_name: str) -> str:
"""Unique key to lookup bonds."""
return "-".join(sorted([atom1_name, atom2_name]))
# Translate bond angles into distances ("virtual bonds").
residue_virtual_bonds: Dict[str, List[Bond]] = {}
for resname, bond_angles in residue_bond_angles.items():
# Create a fast lookup dict for bond lengths.
bond_cache: Dict[str, Bond] = {}
for b in residue_bonds[resname]:
bond_cache[make_bond_key(b.atom1_name, b.atom2_name)] = b
residue_virtual_bonds[resname] = []
for ba in bond_angles:
bond1 = bond_cache[make_bond_key(ba.atom1_name, ba.atom2_name)]
bond2 = bond_cache[make_bond_key(ba.atom2_name, ba.atom3name)]
# Compute distance between atom1 and atom3 using the law of cosines
# c^2 = a^2 + b^2 - 2ab*cos(gamma).
gamma = ba.angle_rad
length = np.sqrt(bond1.length**2 + bond2.length**2 - 2 * bond1.length * bond2.length * np.cos(gamma))
# Propagation of uncertainty assuming uncorrelated errors.
dl_outer = 0.5 / length
dl_dgamma = (2 * bond1.length * bond2.length * np.sin(gamma)) * dl_outer
dl_db1 = (2 * bond1.length - 2 * bond2.length * np.cos(gamma)) * dl_outer
dl_db2 = (2 * bond2.length - 2 * bond1.length * np.cos(gamma)) * dl_outer
stddev = np.sqrt(
(dl_dgamma * ba.stddev) ** 2 + (dl_db1 * bond1.stddev) ** 2 + (dl_db2 * bond2.stddev) ** 2
)
residue_virtual_bonds[resname].append(Bond(ba.atom1_name, ba.atom3name, length, stddev))
return (residue_bonds, residue_virtual_bonds, residue_bond_angles)
# Between-residue bond lengths for general bonds (first element) and for Proline
# (second element).
between_res_bond_length_c_n: Tuple[float, float] = (1.329, 1.341)
between_res_bond_length_stddev_c_n: Tuple[float, float] = (0.014, 0.016)
# Between-residue cos_angles.
between_res_cos_angles_c_n_ca: Tuple[float, float] = (-0.5203, 0.0353) # degrees: 121.352 +- 2.315
between_res_cos_angles_ca_c_n: Tuple[float, float] = (-0.4473, 0.0311) # degrees: 116.568 +- 1.995
# This mapping is used when we need to store atom data in a format that requires
# fixed atom data size for every residue (e.g. a numpy array).
atom_types: List[str] = [
"N",
"CA",
"C",
"CB",
"O",
"CG",
"CG1",
"CG2",
"OG",
"OG1",
"SG",
"CD",
"CD1",
"CD2",
"ND1",
"ND2",
"OD1",
"OD2",
"SD",
"CE",
"CE1",
"CE2",
"CE3",
"NE",
"NE1",
"NE2",
"OE1",
"OE2",
"CH2",
"NH1",
"NH2",
"OH",
"CZ",
"CZ2",
"CZ3",
"NZ",
"OXT",
]
atom_order: Dict[str, int] = {atom_type: i for i, atom_type in enumerate(atom_types)}
atom_type_num = len(atom_types) # := 37.
# A compact atom encoding with 14 columns
# pylint: disable=line-too-long
# pylint: disable=bad-whitespace
restype_name_to_atom14_names: Dict[str, List[str]] = {
"ALA": ["N", "CA", "C", "O", "CB", "", "", "", "", "", "", "", "", ""],
"ARG": ["N", "CA", "C", "O", "CB", "CG", "CD", "NE", "CZ", "NH1", "NH2", "", "", ""],
"ASN": ["N", "CA", "C", "O", "CB", "CG", "OD1", "ND2", "", "", "", "", "", ""],
"ASP": ["N", "CA", "C", "O", "CB", "CG", "OD1", "OD2", "", "", "", "", "", ""],
"CYS": ["N", "CA", "C", "O", "CB", "SG", "", "", "", "", "", "", "", ""],
"GLN": ["N", "CA", "C", "O", "CB", "CG", "CD", "OE1", "NE2", "", "", "", "", ""],
"GLU": ["N", "CA", "C", "O", "CB", "CG", "CD", "OE1", "OE2", "", "", "", "", ""],
"GLY": ["N", "CA", "C", "O", "", "", "", "", "", "", "", "", "", ""],
"HIS": ["N", "CA", "C", "O", "CB", "CG", "ND1", "CD2", "CE1", "NE2", "", "", "", ""],
"ILE": ["N", "CA", "C", "O", "CB", "CG1", "CG2", "CD1", "", "", "", "", "", ""],
"LEU": ["N", "CA", "C", "O", "CB", "CG", "CD1", "CD2", "", "", "", "", "", ""],
"LYS": ["N", "CA", "C", "O", "CB", "CG", "CD", "CE", "NZ", "", "", "", "", ""],
"MET": ["N", "CA", "C", "O", "CB", "CG", "SD", "CE", "", "", "", "", "", ""],
"PHE": ["N", "CA", "C", "O", "CB", "CG", "CD1", "CD2", "CE1", "CE2", "CZ", "", "", ""],
"PRO": ["N", "CA", "C", "O", "CB", "CG", "CD", "", "", "", "", "", "", ""],
"SER": ["N", "CA", "C", "O", "CB", "OG", "", "", "", "", "", "", "", ""],
"THR": ["N", "CA", "C", "O", "CB", "OG1", "CG2", "", "", "", "", "", "", ""],
"TRP": ["N", "CA", "C", "O", "CB", "CG", "CD1", "CD2", "NE1", "CE2", "CE3", "CZ2", "CZ3", "CH2"],
"TYR": ["N", "CA", "C", "O", "CB", "CG", "CD1", "CD2", "CE1", "CE2", "CZ", "OH", "", ""],
"VAL": ["N", "CA", "C", "O", "CB", "CG1", "CG2", "", "", "", "", "", "", ""],
"UNK": ["", "", "", "", "", "", "", "", "", "", "", "", "", ""],
}
# pylint: enable=line-too-long
# pylint: enable=bad-whitespace
# This is the standard residue order when coding AA type as a number.
# Reproduce it by taking 3-letter AA codes and sorting them alphabetically.
restypes: List[str] = [
"A",
"R",
"N",
"D",
"C",
"Q",
"E",
"G",
"H",
"I",
"L",
"K",
"M",
"F",
"P",
"S",
"T",
"W",
"Y",
"V",
]
restype_order: Dict[str, int] = {restype: i for i, restype in enumerate(restypes)}
restype_num = len(restypes) # := 20.
unk_restype_index = restype_num # Catch-all index for unknown restypes.
restypes_with_x: List[str] = restypes + ["X"]
restype_order_with_x: Dict[str, int] = {restype: i for i, restype in enumerate(restypes_with_x)}
def sequence_to_onehot(sequence: str, mapping: Mapping[str, int], map_unknown_to_x: bool = False) -> np.ndarray:
"""Maps the given sequence into a one-hot encoded matrix.
Args:
sequence: An amino acid sequence.
mapping: A dictionary mapping amino acids to integers.
map_unknown_to_x: If True, any amino acid that is not in the mapping will be
mapped to the unknown amino acid 'X'. If the mapping doesn't contain amino acid 'X', an error will be thrown.
If False, any amino acid not in the mapping will throw an error.
Returns:
A numpy array of shape (seq_len, num_unique_aas) with one-hot encoding of the sequence.
Raises:
ValueError: If the mapping doesn't contain values from 0 to
num_unique_aas - 1 without any gaps.
"""
num_entries = max(mapping.values()) + 1
if sorted(set(mapping.values())) != list(range(num_entries)):
raise ValueError(
"The mapping must have values from 0 to num_unique_aas-1 without any gaps. Got: %s"
% sorted(mapping.values())
)
one_hot_arr = np.zeros((len(sequence), num_entries), dtype=np.int32)
for aa_index, aa_type in enumerate(sequence):
if map_unknown_to_x:
if aa_type.isalpha() and aa_type.isupper():
aa_id = mapping.get(aa_type, mapping["X"])
else:
raise ValueError(f"Invalid character in the sequence: {aa_type}")
else:
aa_id = mapping[aa_type]
one_hot_arr[aa_index, aa_id] = 1
return one_hot_arr
restype_1to3: Dict[str, str] = {
"A": "ALA",
"R": "ARG",
"N": "ASN",
"D": "ASP",
"C": "CYS",
"Q": "GLN",
"E": "GLU",
"G": "GLY",
"H": "HIS",
"I": "ILE",
"L": "LEU",
"K": "LYS",
"M": "MET",
"F": "PHE",
"P": "PRO",
"S": "SER",
"T": "THR",
"W": "TRP",
"Y": "TYR",
"V": "VAL",
}
# NB: restype_3to1 differs from Bio.PDB.protein_letters_3to1 by being a simple
# 1-to-1 mapping of 3 letter names to one letter names. The latter contains
# many more, and less common, three letter names as keys and maps many of these
# to the same one letter name (including 'X' and 'U' which we don't use here).
restype_3to1: Dict[str, str] = {v: k for k, v in restype_1to3.items()}
# Define a restype name for all unknown residues.
unk_restype = "UNK"
resnames: List[str] = [restype_1to3[r] for r in restypes] + [unk_restype]
resname_to_idx: Dict[str, int] = {resname: i for i, resname in enumerate(resnames)}
# The mapping here uses hhblits convention, so that B is mapped to D, J and O
# are mapped to X, U is mapped to C, and Z is mapped to E. Other than that the
# remaining 20 amino acids are kept in alphabetical order.
# There are 2 non-amino acid codes, X (representing any amino acid) and
# "-" representing a missing amino acid in an alignment. The id for these
# codes is put at the end (20 and 21) so that they can easily be ignored if
# desired.
HHBLITS_AA_TO_ID: Dict[str, int] = {
"A": 0,
"B": 2,
"C": 1,
"D": 2,
"E": 3,
"F": 4,
"G": 5,
"H": 6,
"I": 7,
"J": 20,
"K": 8,
"L": 9,
"M": 10,
"N": 11,
"O": 20,
"P": 12,
"Q": 13,
"R": 14,
"S": 15,
"T": 16,
"U": 1,
"V": 17,
"W": 18,
"X": 20,
"Y": 19,
"Z": 3,
"-": 21,
}
# Partial inversion of HHBLITS_AA_TO_ID.
ID_TO_HHBLITS_AA: Dict[int, str] = {
0: "A",
1: "C", # Also U.
2: "D", # Also B.
3: "E", # Also Z.
4: "F",
5: "G",
6: "H",
7: "I",
8: "K",
9: "L",
10: "M",
11: "N",
12: "P",
13: "Q",
14: "R",
15: "S",
16: "T",
17: "V",
18: "W",
19: "Y",
20: "X", # Includes J and O.
21: "-",
}
restypes_with_x_and_gap: List[str] = restypes + ["X", "-"]
MAP_HHBLITS_AATYPE_TO_OUR_AATYPE: Tuple[int, ...] = tuple(
restypes_with_x_and_gap.index(ID_TO_HHBLITS_AA[i]) for i in range(len(restypes_with_x_and_gap))
)
def _make_standard_atom_mask() -> np.ndarray:
"""Returns [num_res_types, num_atom_types] mask array."""
# +1 to account for unknown (all 0s).
mask = np.zeros([restype_num + 1, atom_type_num], dtype=np.int32)
for restype, restype_letter in enumerate(restypes):
restype_name = restype_1to3[restype_letter]
atom_names = residue_atoms[restype_name]
for atom_name in atom_names:
atom_type = atom_order[atom_name]
mask[restype, atom_type] = 1
return mask
STANDARD_ATOM_MASK = _make_standard_atom_mask()
# A one hot representation for the first and second atoms defining the axis
# of rotation for each chi-angle in each residue.
def chi_angle_atom(atom_index: int) -> np.ndarray:
"""Define chi-angle rigid groups via one-hot representations."""
chi_angles_index = {}
one_hots = []
for k, v in chi_angles_atoms.items():
indices = [atom_types.index(s[atom_index]) for s in v]
indices.extend([-1] * (4 - len(indices)))
chi_angles_index[k] = indices
for r in restypes:
res3 = restype_1to3[r]
one_hot = np.eye(atom_type_num)[chi_angles_index[res3]]
one_hots.append(one_hot)
one_hots.append(np.zeros([4, atom_type_num])) # Add zeros for residue `X`.
one_hot = np.stack(one_hots, axis=0)
one_hot = np.transpose(one_hot, [0, 2, 1])
return one_hot
chi_atom_1_one_hot = chi_angle_atom(1)
chi_atom_2_one_hot = chi_angle_atom(2)
# An array like chi_angles_atoms but using indices rather than names.
chi_angles_atom_indices_list: List[List[List[str]]] = [chi_angles_atoms[restype_1to3[r]] for r in restypes]
chi_angles_atom_indices_ours: list = map_structure_with_atom_order(chi_angles_atom_indices_list)
chi_angles_atom_indices = np.array(
[chi_atoms + ([[0, 0, 0, 0]] * (4 - len(chi_atoms))) for chi_atoms in chi_angles_atom_indices_list]
)
# Mapping from (res_name, atom_name) pairs to the atom's chi group index
# and atom index within that group.
chi_groups_for_atom: Dict[Tuple[str, str], List[Tuple[int, int]]] = collections.defaultdict(list)
for res_name, chi_angle_atoms_for_res in chi_angles_atoms.items():
for chi_group_i, chi_group in enumerate(chi_angle_atoms_for_res):
for atom_i, atom in enumerate(chi_group):
chi_groups_for_atom[(res_name, atom)].append((chi_group_i, atom_i))
chi_groups_for_atom = dict(chi_groups_for_atom)
def _make_rigid_transformation_4x4(ex: np.ndarray, ey: np.ndarray, translation: np.ndarray) -> np.ndarray:
"""Create a rigid 4x4 transformation matrix from two axes and transl."""
# Normalize ex.
ex_normalized = ex / np.linalg.norm(ex)
# make ey perpendicular to ex
ey_normalized = ey - np.dot(ey, ex_normalized) * ex_normalized
ey_normalized /= np.linalg.norm(ey_normalized)
# compute ez as cross product
eznorm = np.cross(ex_normalized, ey_normalized)
m = np.stack([ex_normalized, ey_normalized, eznorm, translation]).transpose()
m = np.concatenate([m, [[0.0, 0.0, 0.0, 1.0]]], axis=0)
return m
# create an array with (restype, atomtype) --> rigid_group_idx
# and an array with (restype, atomtype, coord) for the atom positions
# and compute affine transformation matrices (4,4) from one rigid group to the
# previous group
restype_atom37_to_rigid_group = np.zeros([21, 37], dtype=int)
restype_atom37_mask = np.zeros([21, 37], dtype=np.float32)
restype_atom37_rigid_group_positions = np.zeros([21, 37, 3], dtype=np.float32)
restype_atom14_to_rigid_group = np.zeros([21, 14], dtype=int)
restype_atom14_mask = np.zeros([21, 14], dtype=np.float32)
restype_atom14_rigid_group_positions = np.zeros([21, 14, 3], dtype=np.float32)
restype_rigid_group_default_frame = np.zeros([21, 8, 4, 4], dtype=np.float32)
def _make_rigid_group_constants() -> None:
"""Fill the arrays above."""
for restype, restype_letter in enumerate(restypes):
resname = restype_1to3[restype_letter]
for atomname, group_idx, atom_position in rigid_group_atom_positions[resname]:
atomtype = atom_order[atomname]
restype_atom37_to_rigid_group[restype, atomtype] = group_idx
restype_atom37_mask[restype, atomtype] = 1
restype_atom37_rigid_group_positions[restype, atomtype, :] = atom_position
atom14idx = restype_name_to_atom14_names[resname].index(atomname)
restype_atom14_to_rigid_group[restype, atom14idx] = group_idx
restype_atom14_mask[restype, atom14idx] = 1
restype_atom14_rigid_group_positions[restype, atom14idx, :] = atom_position
for restype, restype_letter in enumerate(restypes):
resname = restype_1to3[restype_letter]
atom_positions: Dict[str, np.ndarray] = {
name: np.array(pos) for name, _, pos in rigid_group_atom_positions[resname]
}
# backbone to backbone is the identity transform
restype_rigid_group_default_frame[restype, 0, :, :] = np.eye(4)
# pre-omega-frame to backbone (currently dummy identity matrix)
restype_rigid_group_default_frame[restype, 1, :, :] = np.eye(4)
# phi-frame to backbone
mat = _make_rigid_transformation_4x4(
ex=atom_positions["N"] - atom_positions["CA"],
ey=np.array([1.0, 0.0, 0.0]),
translation=atom_positions["N"],
)
restype_rigid_group_default_frame[restype, 2, :, :] = mat
# psi-frame to backbone
mat = _make_rigid_transformation_4x4(
ex=atom_positions["C"] - atom_positions["CA"],
ey=atom_positions["CA"] - atom_positions["N"],
translation=atom_positions["C"],
)
restype_rigid_group_default_frame[restype, 3, :, :] = mat
# chi1-frame to backbone
if chi_angles_mask[restype][0]:
base_atom_names = chi_angles_atoms[resname][0]
base_atom_positions = [atom_positions[name] for name in base_atom_names]
mat = _make_rigid_transformation_4x4(
ex=base_atom_positions[2] - base_atom_positions[1],
ey=base_atom_positions[0] - base_atom_positions[1],
translation=base_atom_positions[2],
)
restype_rigid_group_default_frame[restype, 4, :, :] = mat
# chi2-frame to chi1-frame
# chi3-frame to chi2-frame
# chi4-frame to chi3-frame
# luckily all rotation axes for the next frame start at (0,0,0) of the
# previous frame
for chi_idx in range(1, 4):
if chi_angles_mask[restype][chi_idx]:
axis_end_atom_name = chi_angles_atoms[resname][chi_idx][2]
axis_end_atom_position = atom_positions[axis_end_atom_name]
mat = _make_rigid_transformation_4x4(
ex=axis_end_atom_position,
ey=np.array([-1.0, 0.0, 0.0]),
translation=axis_end_atom_position,
)
restype_rigid_group_default_frame[restype, 4 + chi_idx, :, :] = mat
_make_rigid_group_constants()
def make_atom14_dists_bounds(
overlap_tolerance: float = 1.5,
bond_length_tolerance_factor: int = 15,
) -> Dict[str, np.ndarray]:
"""compute upper and lower bounds for bonds to assess violations."""
restype_atom14_bond_lower_bound = np.zeros([21, 14, 14], np.float32)
restype_atom14_bond_upper_bound = np.zeros([21, 14, 14], np.float32)
restype_atom14_bond_stddev = np.zeros([21, 14, 14], np.float32)
residue_bonds, residue_virtual_bonds, _ = load_stereo_chemical_props()
for restype, restype_letter in enumerate(restypes):
resname = restype_1to3[restype_letter]
atom_list = restype_name_to_atom14_names[resname]
# create lower and upper bounds for clashes
for atom1_idx, atom1_name in enumerate(atom_list):
if not atom1_name:
continue
atom1_radius = van_der_waals_radius[atom1_name[0]]
for atom2_idx, atom2_name in enumerate(atom_list):
if (not atom2_name) or atom1_idx == atom2_idx:
continue
atom2_radius = van_der_waals_radius[atom2_name[0]]
lower = atom1_radius + atom2_radius - overlap_tolerance
upper = 1e10
restype_atom14_bond_lower_bound[restype, atom1_idx, atom2_idx] = lower
restype_atom14_bond_lower_bound[restype, atom2_idx, atom1_idx] = lower
restype_atom14_bond_upper_bound[restype, atom1_idx, atom2_idx] = upper
restype_atom14_bond_upper_bound[restype, atom2_idx, atom1_idx] = upper
# overwrite lower and upper bounds for bonds and angles
for b in residue_bonds[resname] + residue_virtual_bonds[resname]:
atom1_idx = atom_list.index(b.atom1_name)
atom2_idx = atom_list.index(b.atom2_name)
lower = b.length - bond_length_tolerance_factor * b.stddev
upper = b.length + bond_length_tolerance_factor * b.stddev
restype_atom14_bond_lower_bound[restype, atom1_idx, atom2_idx] = lower
restype_atom14_bond_lower_bound[restype, atom2_idx, atom1_idx] = lower
restype_atom14_bond_upper_bound[restype, atom1_idx, atom2_idx] = upper
restype_atom14_bond_upper_bound[restype, atom2_idx, atom1_idx] = upper
restype_atom14_bond_stddev[restype, atom1_idx, atom2_idx] = b.stddev
restype_atom14_bond_stddev[restype, atom2_idx, atom1_idx] = b.stddev
return {
"lower_bound": restype_atom14_bond_lower_bound, # shape (21,14,14)
"upper_bound": restype_atom14_bond_upper_bound, # shape (21,14,14)
"stddev": restype_atom14_bond_stddev, # shape (21,14,14)
}
restype_atom14_ambiguous_atoms = np.zeros((21, 14), dtype=np.float32)
restype_atom14_ambiguous_atoms_swap_idx: np.ndarray = np.tile(np.arange(14, dtype=int), (21, 1))
def _make_atom14_ambiguity_feats() -> None:
for res, pairs in residue_atom_renaming_swaps.items():
res_idx = restype_order[restype_3to1[res]]
for atom1, atom2 in pairs.items():
atom1_idx = restype_name_to_atom14_names[res].index(atom1)
atom2_idx = restype_name_to_atom14_names[res].index(atom2)
restype_atom14_ambiguous_atoms[res_idx, atom1_idx] = 1
restype_atom14_ambiguous_atoms[res_idx, atom2_idx] = 1
restype_atom14_ambiguous_atoms_swap_idx[res_idx, atom1_idx] = atom2_idx
restype_atom14_ambiguous_atoms_swap_idx[res_idx, atom2_idx] = atom1_idx
_make_atom14_ambiguity_feats()
def aatype_to_str_sequence(aatype: Sequence[int]) -> str:
return "".join([restypes_with_x[aatype[i]] for i in range(len(aatype))])
| 0 |
hf_public_repos/transformers/src/transformers/models/esm | hf_public_repos/transformers/src/transformers/models/esm/openfold_utils/feats.py | # Copyright 2021 AlQuraishi Laboratory
# Copyright 2021 DeepMind Technologies Limited
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Dict, Tuple, overload
import torch
import torch.types
from torch import nn
from . import residue_constants as rc
from .rigid_utils import Rigid, Rotation
from .tensor_utils import batched_gather
@overload
def pseudo_beta_fn(aatype: torch.Tensor, all_atom_positions: torch.Tensor, all_atom_masks: None) -> torch.Tensor:
...
@overload
def pseudo_beta_fn(
aatype: torch.Tensor, all_atom_positions: torch.Tensor, all_atom_masks: torch.Tensor
) -> Tuple[torch.Tensor, torch.Tensor]:
...
def pseudo_beta_fn(aatype, all_atom_positions, all_atom_masks):
is_gly = aatype == rc.restype_order["G"]
ca_idx = rc.atom_order["CA"]
cb_idx = rc.atom_order["CB"]
pseudo_beta = torch.where(
is_gly[..., None].expand(*((-1,) * len(is_gly.shape)), 3),
all_atom_positions[..., ca_idx, :],
all_atom_positions[..., cb_idx, :],
)
if all_atom_masks is not None:
pseudo_beta_mask = torch.where(
is_gly,
all_atom_masks[..., ca_idx],
all_atom_masks[..., cb_idx],
)
return pseudo_beta, pseudo_beta_mask
else:
return pseudo_beta
def atom14_to_atom37(atom14: torch.Tensor, batch: Dict[str, torch.Tensor]) -> torch.Tensor:
atom37_data = batched_gather(
atom14,
batch["residx_atom37_to_atom14"],
dim=-2,
no_batch_dims=len(atom14.shape[:-2]),
)
atom37_data = atom37_data * batch["atom37_atom_exists"][..., None]
return atom37_data
def build_template_angle_feat(template_feats: Dict[str, torch.Tensor]) -> torch.Tensor:
template_aatype = template_feats["template_aatype"]
torsion_angles_sin_cos = template_feats["template_torsion_angles_sin_cos"]
alt_torsion_angles_sin_cos = template_feats["template_alt_torsion_angles_sin_cos"]
torsion_angles_mask = template_feats["template_torsion_angles_mask"]
template_angle_feat = torch.cat(
[
nn.functional.one_hot(template_aatype, 22),
torsion_angles_sin_cos.reshape(*torsion_angles_sin_cos.shape[:-2], 14),
alt_torsion_angles_sin_cos.reshape(*alt_torsion_angles_sin_cos.shape[:-2], 14),
torsion_angles_mask,
],
dim=-1,
)
return template_angle_feat
def build_template_pair_feat(
batch: Dict[str, torch.Tensor],
min_bin: torch.types.Number,
max_bin: torch.types.Number,
no_bins: int,
use_unit_vector: bool = False,
eps: float = 1e-20,
inf: float = 1e8,
) -> torch.Tensor:
template_mask = batch["template_pseudo_beta_mask"]
template_mask_2d = template_mask[..., None] * template_mask[..., None, :]
# Compute distogram (this seems to differ slightly from Alg. 5)
tpb = batch["template_pseudo_beta"]
dgram = torch.sum((tpb[..., None, :] - tpb[..., None, :, :]) ** 2, dim=-1, keepdim=True)
lower = torch.linspace(min_bin, max_bin, no_bins, device=tpb.device) ** 2
upper = torch.cat([lower[1:], lower.new_tensor([inf])], dim=-1)
dgram = ((dgram > lower) * (dgram < upper)).type(dgram.dtype)
to_concat = [dgram, template_mask_2d[..., None]]
aatype_one_hot: torch.LongTensor = nn.functional.one_hot(
batch["template_aatype"],
rc.restype_num + 2,
)
n_res = batch["template_aatype"].shape[-1]
to_concat.append(aatype_one_hot[..., None, :, :].expand(*aatype_one_hot.shape[:-2], n_res, -1, -1))
to_concat.append(aatype_one_hot[..., None, :].expand(*aatype_one_hot.shape[:-2], -1, n_res, -1))
n, ca, c = [rc.atom_order[a] for a in ["N", "CA", "C"]]
rigids = Rigid.make_transform_from_reference(
n_xyz=batch["template_all_atom_positions"][..., n, :],
ca_xyz=batch["template_all_atom_positions"][..., ca, :],
c_xyz=batch["template_all_atom_positions"][..., c, :],
eps=eps,
)
points = rigids.get_trans()[..., None, :, :]
rigid_vec = rigids[..., None].invert_apply(points)
inv_distance_scalar = torch.rsqrt(eps + torch.sum(rigid_vec**2, dim=-1))
t_aa_masks = batch["template_all_atom_mask"]
template_mask = t_aa_masks[..., n] * t_aa_masks[..., ca] * t_aa_masks[..., c]
template_mask_2d = template_mask[..., None] * template_mask[..., None, :]
inv_distance_scalar = inv_distance_scalar * template_mask_2d
unit_vector = rigid_vec * inv_distance_scalar[..., None]
if not use_unit_vector:
unit_vector = unit_vector * 0.0
to_concat.extend(torch.unbind(unit_vector[..., None, :], dim=-1))
to_concat.append(template_mask_2d[..., None])
act = torch.cat(to_concat, dim=-1)
act = act * template_mask_2d[..., None]
return act
def build_extra_msa_feat(batch: Dict[str, torch.Tensor]) -> torch.Tensor:
msa_1hot: torch.LongTensor = nn.functional.one_hot(batch["extra_msa"], 23)
msa_feat = [
msa_1hot,
batch["extra_has_deletion"].unsqueeze(-1),
batch["extra_deletion_value"].unsqueeze(-1),
]
return torch.cat(msa_feat, dim=-1)
def torsion_angles_to_frames(
r: Rigid,
alpha: torch.Tensor,
aatype: torch.Tensor,
rrgdf: torch.Tensor,
) -> Rigid:
# [*, N, 8, 4, 4]
default_4x4 = rrgdf[aatype, ...]
# [*, N, 8] transformations, i.e.
# One [*, N, 8, 3, 3] rotation matrix and
# One [*, N, 8, 3] translation matrix
default_r = r.from_tensor_4x4(default_4x4)
bb_rot = alpha.new_zeros((*((1,) * len(alpha.shape[:-1])), 2))
bb_rot[..., 1] = 1
# [*, N, 8, 2]
alpha = torch.cat([bb_rot.expand(*alpha.shape[:-2], -1, -1), alpha], dim=-2)
# [*, N, 8, 3, 3]
# Produces rotation matrices of the form:
# [
# [1, 0 , 0 ],
# [0, a_2,-a_1],
# [0, a_1, a_2]
# ]
# This follows the original code rather than the supplement, which uses
# different indices.
all_rots = alpha.new_zeros(default_r.get_rots().get_rot_mats().shape)
all_rots[..., 0, 0] = 1
all_rots[..., 1, 1] = alpha[..., 1]
all_rots[..., 1, 2] = -alpha[..., 0]
all_rots[..., 2, 1:] = alpha
all_frames = default_r.compose(Rigid(Rotation(rot_mats=all_rots), None))
chi2_frame_to_frame = all_frames[..., 5]
chi3_frame_to_frame = all_frames[..., 6]
chi4_frame_to_frame = all_frames[..., 7]
chi1_frame_to_bb = all_frames[..., 4]
chi2_frame_to_bb = chi1_frame_to_bb.compose(chi2_frame_to_frame)
chi3_frame_to_bb = chi2_frame_to_bb.compose(chi3_frame_to_frame)
chi4_frame_to_bb = chi3_frame_to_bb.compose(chi4_frame_to_frame)
all_frames_to_bb = Rigid.cat(
[
all_frames[..., :5],
chi2_frame_to_bb.unsqueeze(-1),
chi3_frame_to_bb.unsqueeze(-1),
chi4_frame_to_bb.unsqueeze(-1),
],
dim=-1,
)
all_frames_to_global = r[..., None].compose(all_frames_to_bb)
return all_frames_to_global
def frames_and_literature_positions_to_atom14_pos(
r: Rigid,
aatype: torch.Tensor,
default_frames: torch.Tensor,
group_idx: torch.Tensor,
atom_mask: torch.Tensor,
lit_positions: torch.Tensor,
) -> torch.Tensor:
# [*, N, 14]
group_mask = group_idx[aatype, ...]
# [*, N, 14, 8]
group_mask_one_hot: torch.LongTensor = nn.functional.one_hot(
group_mask,
num_classes=default_frames.shape[-3],
)
# [*, N, 14, 8]
t_atoms_to_global = r[..., None, :] * group_mask_one_hot
# [*, N, 14]
t_atoms_to_global = t_atoms_to_global.map_tensor_fn(lambda x: torch.sum(x, dim=-1))
# [*, N, 14, 1]
atom_mask = atom_mask[aatype, ...].unsqueeze(-1)
# [*, N, 14, 3]
lit_positions = lit_positions[aatype, ...]
pred_positions = t_atoms_to_global.apply(lit_positions)
pred_positions = pred_positions * atom_mask
return pred_positions
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/univnet/configuration_univnet.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" UnivNetModel model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
UNIVNET_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"dg845/univnet-dev": "https://huggingface.co/dg845/univnet-dev/resolve/main/config.json",
}
class UnivNetConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`UnivNetModel`]. It is used to instantiate a
UnivNet vocoder model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the UnivNet
[dg845/univnet-dev](https://huggingface.co/dg845/univnet-dev) architecture, which corresponds to the 'c32'
architecture in [maum-ai/univnet](https://github.com/maum-ai/univnet/blob/master/config/default_c32.yaml).
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
model_in_channels (`int`, *optional*, defaults to 64):
The number of input channels for the UnivNet residual network. This should correspond to
`noise_sequence.shape[1]` and the value used in the [`UnivNetFeatureExtractor`] class.
model_hidden_channels (`int`, *optional*, defaults to 32):
The number of hidden channels of each residual block in the UnivNet residual network.
num_mel_bins (`int`, *optional*, defaults to 100):
The number of frequency bins in the conditioning log-mel spectrogram. This should correspond to the value
used in the [`UnivNetFeatureExtractor`] class.
resblock_kernel_sizes (`Tuple[int]` or `List[int]`, *optional*, defaults to `[3, 3, 3]`):
A tuple of integers defining the kernel sizes of the 1D convolutional layers in the UnivNet residual
network. The length of `resblock_kernel_sizes` defines the number of resnet blocks and should match that of
`resblock_stride_sizes` and `resblock_dilation_sizes`.
resblock_stride_sizes (`Tuple[int]` or `List[int]`, *optional*, defaults to `[8, 8, 4]`):
A tuple of integers defining the stride sizes of the 1D convolutional layers in the UnivNet residual
network. The length of `resblock_stride_sizes` should match that of `resblock_kernel_sizes` and
`resblock_dilation_sizes`.
resblock_dilation_sizes (`Tuple[Tuple[int]]` or `List[List[int]]`, *optional*, defaults to `[[1, 3, 9, 27], [1, 3, 9, 27], [1, 3, 9, 27]]`):
A nested tuple of integers defining the dilation rates of the dilated 1D convolutional layers in the
UnivNet residual network. The length of `resblock_dilation_sizes` should match that of
`resblock_kernel_sizes` and `resblock_stride_sizes`. The length of each nested list in
`resblock_dilation_sizes` defines the number of convolutional layers per resnet block.
kernel_predictor_num_blocks (`int`, *optional*, defaults to 3):
The number of residual blocks in the kernel predictor network, which calculates the kernel and bias for
each location variable convolution layer in the UnivNet residual network.
kernel_predictor_hidden_channels (`int`, *optional*, defaults to 64):
The number of hidden channels for each residual block in the kernel predictor network.
kernel_predictor_conv_size (`int`, *optional*, defaults to 3):
The kernel size of each 1D convolutional layer in the kernel predictor network.
kernel_predictor_dropout (`float`, *optional*, defaults to 0.0):
The dropout probability for each residual block in the kernel predictor network.
initializer_range (`float`, *optional*, defaults to 0.01):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
leaky_relu_slope (`float`, *optional*, defaults to 0.2):
The angle of the negative slope used by the leaky ReLU activation.
Example:
```python
>>> from transformers import UnivNetModel, UnivNetConfig
>>> # Initializing a Tortoise TTS style configuration
>>> configuration = UnivNetConfig()
>>> # Initializing a model (with random weights) from the Tortoise TTS style configuration
>>> model = UnivNetModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```
"""
model_type = "univnet"
def __init__(
self,
model_in_channels=64,
model_hidden_channels=32,
num_mel_bins=100,
resblock_kernel_sizes=[3, 3, 3],
resblock_stride_sizes=[8, 8, 4],
resblock_dilation_sizes=[[1, 3, 9, 27], [1, 3, 9, 27], [1, 3, 9, 27]],
kernel_predictor_num_blocks=3,
kernel_predictor_hidden_channels=64,
kernel_predictor_conv_size=3,
kernel_predictor_dropout=0.0,
initializer_range=0.01,
leaky_relu_slope=0.2,
**kwargs,
):
if not (len(resblock_kernel_sizes) == len(resblock_stride_sizes) == len(resblock_dilation_sizes)):
raise ValueError(
"`resblock_kernel_sizes`, `resblock_stride_sizes`, and `resblock_dilation_sizes` must all have the"
" same length (which will be the number of resnet blocks in the model)."
)
self.model_in_channels = model_in_channels
self.model_hidden_channels = model_hidden_channels
self.num_mel_bins = num_mel_bins
self.resblock_kernel_sizes = resblock_kernel_sizes
self.resblock_stride_sizes = resblock_stride_sizes
self.resblock_dilation_sizes = resblock_dilation_sizes
self.kernel_predictor_num_blocks = kernel_predictor_num_blocks
self.kernel_predictor_hidden_channels = kernel_predictor_hidden_channels
self.kernel_predictor_conv_size = kernel_predictor_conv_size
self.kernel_predictor_dropout = kernel_predictor_dropout
self.initializer_range = initializer_range
self.leaky_relu_slope = leaky_relu_slope
super().__init__(**kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/univnet/feature_extraction_univnet.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Feature extractor class for UnivNetModel."""
from typing import Any, Dict, List, Optional, Union
import numpy as np
from ...audio_utils import mel_filter_bank, optimal_fft_length, spectrogram, window_function
from ...feature_extraction_sequence_utils import SequenceFeatureExtractor
from ...feature_extraction_utils import BatchFeature
from ...utils import PaddingStrategy, TensorType, logging
logger = logging.get_logger(__name__)
class UnivNetFeatureExtractor(SequenceFeatureExtractor):
r"""
Constructs a UnivNet feature extractor.
This class extracts log-mel-filter bank features from raw speech using the short time Fourier Transform (STFT). The
STFT implementation follows that of TacoTron 2 and Hifi-GAN.
This feature extractor inherits from [`~feature_extraction_sequence_utils.SequenceFeatureExtractor`] which contains
most of the main methods. Users should refer to this superclass for more information regarding those methods.
Args:
feature_size (`int`, *optional*, defaults to 1):
The feature dimension of the extracted features.
sampling_rate (`int`, *optional*, defaults to 24000):
The sampling rate at which the audio files should be digitalized expressed in hertz (Hz).
padding_value (`float`, *optional*, defaults to 0.0):
The value to pad with when applying the padding strategy defined by the `padding` argument to
[`UnivNetFeatureExtractor.__call__`]. Should correspond to audio silence. The `pad_end` argument to
`__call__` will also use this padding value.
do_normalize (`bool`, *optional*, defaults to `False`):
Whether to perform Tacotron 2 normalization on the input. Normalizing can help to significantly improve the
performance for some models.
num_mel_bins (`int`, *optional*, defaults to 100):
The number of mel-frequency bins in the extracted spectrogram features. This should match
`UnivNetModel.config.num_mel_bins`.
hop_length (`int`, *optional*, defaults to 256):
The direct number of samples between sliding windows. Otherwise referred to as "shift" in many papers. Note
that this is different from other audio feature extractors such as [`SpeechT5FeatureExtractor`] which take
the `hop_length` in ms.
win_length (`int`, *optional*, defaults to 1024):
The direct number of samples for each sliding window. Note that this is different from other audio feature
extractors such as [`SpeechT5FeatureExtractor`] which take the `win_length` in ms.
win_function (`str`, *optional*, defaults to `"hann_window"`):
Name for the window function used for windowing, must be accessible via `torch.{win_function}`
filter_length (`int`, *optional*, defaults to 1024):
The number of FFT components to use. If `None`, this is determined using
`transformers.audio_utils.optimal_fft_length`.
max_length_s (`int`, *optional*, defaults to 10):
The maximum input lenght of the model in seconds. This is used to pad the audio.
fmin (`float`, *optional*, defaults to 0.0):
Minimum mel frequency in Hz.
fmax (`float`, *optional*):
Maximum mel frequency in Hz. If not set, defaults to `sampling_rate / 2`.
mel_floor (`float`, *optional*, defaults to 1e-09):
Minimum value of mel frequency banks. Note that the way [`UnivNetFeatureExtractor`] uses `mel_floor` is
different than in [`transformers.audio_utils.spectrogram`].
center (`bool`, *optional*, defaults to `False`):
Whether to pad the waveform so that frame `t` is centered around time `t * hop_length`. If `False`, frame
`t` will start at time `t * hop_length`.
compression_factor (`float`, *optional*, defaults to 1.0):
The multiplicative compression factor for dynamic range compression during spectral normalization.
compression_clip_val (`float`, *optional*, defaults to 1e-05):
The clip value applied to the waveform before applying dynamic range compression during spectral
normalization.
normalize_min (`float`, *optional*, defaults to -11.512925148010254):
The min value used for Tacotron 2-style linear normalization. The default is the original value from the
Tacotron 2 implementation.
normalize_max (`float`, *optional*, defaults to 2.3143386840820312):
The max value used for Tacotron 2-style linear normalization. The default is the original value from the
Tacotron 2 implementation.
model_in_channels (`int`, *optional*, defaults to 64):
The number of input channels to the [`UnivNetModel`] model. This should match
`UnivNetModel.config.model_in_channels`.
pad_end_length (`int`, *optional*, defaults to 10):
If padding the end of each waveform, the number of spectrogram frames worth of samples to append. The
number of appended samples will be `pad_end_length * hop_length`.
return_attention_mask (`bool`, *optional*, defaults to `True`):
Whether or not [`~UnivNetFeatureExtractor.__call__`] should return `attention_mask`.
"""
model_input_names = ["input_features", "noise_sequence", "padding_mask"]
def __init__(
self,
feature_size: int = 1,
sampling_rate: int = 24000,
padding_value: float = 0.0,
do_normalize: bool = False,
num_mel_bins: int = 100,
hop_length: int = 256,
win_length: int = 1024,
win_function: str = "hann_window",
filter_length: Optional[int] = 1024,
max_length_s: int = 10,
fmin: float = 0.0,
fmax: Optional[float] = None,
mel_floor: float = 1e-9,
center: bool = False,
compression_factor: float = 1.0,
compression_clip_val: float = 1e-5,
normalize_min: float = -11.512925148010254,
normalize_max: float = 2.3143386840820312,
model_in_channels: int = 64,
pad_end_length: int = 10,
return_attention_mask=True,
**kwargs,
):
super().__init__(
feature_size=feature_size,
sampling_rate=sampling_rate,
padding_value=padding_value,
return_attention_mask=return_attention_mask,
**kwargs,
)
self.do_normalize = do_normalize
self.num_mel_bins = num_mel_bins
self.hop_length = hop_length
self.win_length = win_length
self.win_function = win_function
self.filter_length = filter_length
self.fmin = fmin
if fmax is None:
# Follows the librosa.filters.mel implementation
fmax = float(sampling_rate) / 2
self.fmax = fmax
self.mel_floor = mel_floor
self.max_length_s = max_length_s
self.num_max_samples = max_length_s * sampling_rate
if self.filter_length is None:
self.n_fft = optimal_fft_length(self.win_length)
else:
self.n_fft = self.filter_length
self.n_freqs = (self.n_fft // 2) + 1
self.window = window_function(window_length=self.win_length, name=self.win_function, periodic=True)
self.mel_filters = mel_filter_bank(
num_frequency_bins=self.n_freqs,
num_mel_filters=self.num_mel_bins,
min_frequency=self.fmin,
max_frequency=self.fmax,
sampling_rate=self.sampling_rate,
norm="slaney",
mel_scale="slaney",
)
self.center = center
self.compression_factor = compression_factor
self.compression_clip_val = compression_clip_val
self.normalize_min = normalize_min
self.normalize_max = normalize_max
self.model_in_channels = model_in_channels
self.pad_end_length = pad_end_length
def normalize(self, spectrogram):
return 2 * ((spectrogram - self.normalize_min) / (self.normalize_max - self.normalize_min)) - 1
def denormalize(self, spectrogram):
return self.normalize_min + (self.normalize_max - self.normalize_min) * ((spectrogram + 1) / 2)
def mel_spectrogram(self, waveform: np.ndarray) -> np.ndarray:
"""
Calculates log MEL spectrograms from a batch of waveforms. Note that the input waveform(s) will be padded by
`int(self.n_fft - self.hop_length) / 2` on both sides using the `reflect` padding mode.
Args:
waveform (`np.ndarray` of shape `(length,)`):
The input waveform. This must be a single real-valued, mono waveform.
Returns:
`numpy.ndarray`: Array containing a log-mel spectrogram of shape `(num_frames, num_mel_bins)`.
"""
# Do custom padding based on the official MelGAN and Hifi-GAN implementations
# See https://github.com/maum-ai/univnet/blob/9bb2b54838bb6d7ce767131cc7b8b61198bc7558/utils/stft.py#L84-L86
waveform = np.pad(
waveform,
(int((self.n_fft - self.hop_length) / 2), int((self.n_fft - self.hop_length) / 2)),
mode="reflect",
)
# Get the complex spectrogram.
# Note: waveform must be unbatched currently due to the implementation of spectrogram(...).
complex_spectrogram = spectrogram(
waveform,
window=self.window,
frame_length=self.n_fft,
hop_length=self.hop_length,
fft_length=self.n_fft,
power=None,
center=self.center,
mel_filters=None,
mel_floor=None,
)
# Apply the MEL filter bank and MEL floor manually since UnivNet uses a slightly different implementation
amplitude_spectrogram = np.sqrt(
np.real(complex_spectrogram) ** 2 + np.imag(complex_spectrogram) ** 2 + self.mel_floor
)
mel_spectrogram = np.matmul(self.mel_filters.T, amplitude_spectrogram)
# Perform spectral normalization to get the log mel spectrogram.
log_mel_spectrogram = np.log(
np.clip(mel_spectrogram, a_min=self.compression_clip_val, a_max=None) * self.compression_factor
)
# Return spectrogram with num_mel_bins last
return log_mel_spectrogram.T
def generate_noise(
self,
noise_length: int,
generator: Optional[np.random.Generator] = None,
) -> np.ndarray:
"""
Generates a random noise sequence of standard Gaussian noise for use in the `noise_sequence` argument of
[`UnivNetModel.forward`].
Args:
spectrogram_length (`int`):
The length (dim 0) of the generated noise.
model_in_channels (`int`, *optional*, defaults to `None`):
The number of features (dim 1) of the generated noise. This should correspond to the
`model_in_channels` of the [`UnivNetGan`] model. If not set, this will default to
`self.config.model_in_channels`.
generator (`numpy.random.Generator`, *optional*, defaults to `None`)
An optional `numpy.random.Generator` random number generator to control noise generation. If not set, a
new generator with fresh entropy will be created.
Returns:
`numpy.ndarray`: Array containing random standard Gaussian noise of shape `(noise_length,
model_in_channels)`.
"""
if generator is None:
generator = np.random.default_rng()
noise_shape = (noise_length, self.model_in_channels)
noise = generator.standard_normal(noise_shape, dtype=np.float32)
return noise
def batch_decode(self, waveforms, waveform_lengths=None) -> List[np.ndarray]:
r"""
Removes padding from generated audio after running [`UnivNetModel.forward`]. This returns a ragged list of 1D
audio waveform arrays and not a single tensor/array because in general the waveforms will have different
lengths after removing padding.
Args:
waveforms (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
The batched output waveforms from the [`UnivNetModel`].
waveform_lengths (`torch.FloatTensor` of shape `(batch_size,)`, *optional*):
The batched lengths of each waveform before padding.
Returns:
`List[np.ndarray]`: A ragged list of 1D waveform arrays with padding removed.
"""
# Collapse the batched waveform tensor to a list of 1D audio waveforms
waveforms = [waveform.detach().clone().cpu().numpy() for waveform in waveforms]
if waveform_lengths is not None:
waveforms = [waveform[: waveform_lengths[i]] for i, waveform in enumerate(waveforms)]
return waveforms
def __call__(
self,
raw_speech: Union[np.ndarray, List[float], List[np.ndarray], List[List[float]]],
sampling_rate: Optional[int] = None,
padding: Union[bool, str, PaddingStrategy] = True,
max_length: Optional[int] = None,
truncation: bool = True,
pad_to_multiple_of: Optional[int] = None,
return_noise: bool = True,
generator: Optional[np.random.Generator] = None,
pad_end: bool = False,
pad_length: Optional[int] = None,
do_normalize: Optional[str] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
) -> BatchFeature:
"""
Main method to featurize and prepare for the model one or several sequence(s).
Args:
raw_speech (`np.ndarray`, `List[float]`, `List[np.ndarray]`, `List[List[float]]`):
The sequence or batch of sequences to be padded. Each sequence can be a numpy array, a list of float
values, a list of numpy arrays or a list of list of float values. Must be mono channel audio, not
stereo, i.e. single float per timestep.
sampling_rate (`int`, *optional*):
The sampling rate at which the `raw_speech` input was sampled. It is strongly recommended to pass
`sampling_rate` at the forward call to prevent silent errors and allow automatic speech recognition
pipeline.
padding (`bool`, `str` or [`~utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the input `raw_speech` waveforms (according to the model's padding side and
padding index) among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
If `pad_end = True`, that padding will occur before the `padding` strategy is applied.
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
truncation (`bool`, *optional*, defaults to `True`):
Activates truncation to cut input sequences longer than `max_length` to `max_length`.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Cores on NVIDIA hardware with compute capability
`>= 7.5` (Volta), or on TPUs which benefit from having sequence lengths be a multiple of 128.
return_noise (`bool`, *optional*, defaults to `True`):
Whether to generate and return a noise waveform for use in [`UnivNetModel.forward`].
generator (`numpy.random.Generator`, *optional*, defaults to `None`):
An optional `numpy.random.Generator` random number generator to use when generating noise.
pad_end (`bool`, *optional*, defaults to `False`):
Whether to pad the end of each waveform with silence. This can help reduce artifacts at the end of the
generated audio sample; see https://github.com/seungwonpark/melgan/issues/8 for more details. This
padding will be done before the padding strategy specified in `padding` is performed.
pad_length (`int`, *optional*, defaults to `None`):
If padding the end of each waveform, the length of the padding in spectrogram frames. If not set, this
will default to `self.config.pad_end_length`.
do_normalize (`bool`, *optional*):
Whether to perform Tacotron 2 normalization on the input. Normalizing can help to significantly improve
the performance for some models. If not set, this will default to `self.config.do_normalize`.
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific feature_extractor's default.
[What are attention masks?](../glossary#attention-mask)
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.np.array` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
"""
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
if sampling_rate is not None:
if sampling_rate != self.sampling_rate:
raise ValueError(
f"The model corresponding to this feature extractor: {self.__class__.__name__} was trained using a"
f" sampling rate of {self.sampling_rate}. Please make sure that the provided `raw_speech` input"
f" was sampled with {self.sampling_rate} and not {sampling_rate}."
)
else:
logger.warning(
"It is strongly recommended to pass the `sampling_rate` argument to this function. "
"Failing to do so can result in silent errors that might be hard to debug."
)
is_batched_numpy = isinstance(raw_speech, np.ndarray) and len(raw_speech.shape) > 1
if is_batched_numpy and len(raw_speech.shape) > 2:
raise ValueError(f"Only mono-channel audio is supported for input to {self}")
is_batched = is_batched_numpy or (
isinstance(raw_speech, (list, tuple)) and (isinstance(raw_speech[0], (np.ndarray, tuple, list)))
)
if is_batched:
raw_speech = [np.asarray(speech, dtype=np.float32) for speech in raw_speech]
elif not is_batched and not isinstance(raw_speech, np.ndarray):
raw_speech = np.asarray(raw_speech, dtype=np.float32)
elif isinstance(raw_speech, np.ndarray) and raw_speech.dtype is np.dtype(np.float64):
raw_speech = raw_speech.astype(np.float32)
# always return batch
if not is_batched:
raw_speech = [np.asarray(raw_speech, dtype=np.float32)]
# Pad end to reduce artifacts
if pad_end:
pad_length = pad_length if pad_length is not None else self.pad_end_length
raw_speech = [
np.pad(waveform, (0, pad_length * self.hop_length), constant_values=self.padding_value)
for waveform in raw_speech
]
batched_speech = BatchFeature({"input_features": raw_speech})
padded_inputs = self.pad(
batched_speech,
padding=padding,
max_length=max_length if max_length is not None else self.num_max_samples,
truncation=truncation,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
# make sure list is in array format
# input_features = padded_inputs.get("input_features").transpose(2, 0, 1)
input_features = padded_inputs.get("input_features")
mel_spectrograms = [self.mel_spectrogram(waveform) for waveform in input_features]
if isinstance(input_features[0], List):
batched_speech["input_features"] = [np.asarray(mel, dtype=np.float32) for mel in mel_spectrograms]
else:
batched_speech["input_features"] = [mel.astype(np.float32) for mel in mel_spectrograms]
# convert attention_mask to correct format
attention_mask = padded_inputs.get("attention_mask")
if attention_mask is not None:
batched_speech["padding_mask"] = [np.asarray(array, dtype=np.int32) for array in attention_mask]
if return_noise:
noise = [
self.generate_noise(spectrogram.shape[0], generator)
for spectrogram in batched_speech["input_features"]
]
batched_speech["noise_sequence"] = noise
if do_normalize:
batched_speech["input_features"] = [
self.normalize(spectrogram) for spectrogram in batched_speech["input_features"]
]
if return_tensors is not None:
batched_speech = batched_speech.convert_to_tensors(return_tensors)
return batched_speech
def to_dict(self) -> Dict[str, Any]:
output = super().to_dict()
# Don't serialize these as they are derived from the other properties.
names = ["window", "mel_filters", "n_fft", "n_freqs", "num_max_samples"]
for name in names:
if name in output:
del output[name]
return output
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/univnet/convert_univnet.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import torch
from transformers import UnivNetConfig, UnivNetModel, logging
logging.set_verbosity_info()
logger = logging.get_logger("transformers.models.univnet")
def get_kernel_predictor_key_mapping(config: UnivNetConfig, old_prefix: str = "", new_prefix: str = ""):
mapping = {}
# Initial conv layer
mapping[f"{old_prefix}.input_conv.0.weight_g"] = f"{new_prefix}.input_conv.weight_g"
mapping[f"{old_prefix}.input_conv.0.weight_v"] = f"{new_prefix}.input_conv.weight_v"
mapping[f"{old_prefix}.input_conv.0.bias"] = f"{new_prefix}.input_conv.bias"
# Kernel predictor resnet blocks
for i in range(config.kernel_predictor_num_blocks):
mapping[f"{old_prefix}.residual_convs.{i}.1.weight_g"] = f"{new_prefix}.resblocks.{i}.conv1.weight_g"
mapping[f"{old_prefix}.residual_convs.{i}.1.weight_v"] = f"{new_prefix}.resblocks.{i}.conv1.weight_v"
mapping[f"{old_prefix}.residual_convs.{i}.1.bias"] = f"{new_prefix}.resblocks.{i}.conv1.bias"
mapping[f"{old_prefix}.residual_convs.{i}.3.weight_g"] = f"{new_prefix}.resblocks.{i}.conv2.weight_g"
mapping[f"{old_prefix}.residual_convs.{i}.3.weight_v"] = f"{new_prefix}.resblocks.{i}.conv2.weight_v"
mapping[f"{old_prefix}.residual_convs.{i}.3.bias"] = f"{new_prefix}.resblocks.{i}.conv2.bias"
# Kernel output conv
mapping[f"{old_prefix}.kernel_conv.weight_g"] = f"{new_prefix}.kernel_conv.weight_g"
mapping[f"{old_prefix}.kernel_conv.weight_v"] = f"{new_prefix}.kernel_conv.weight_v"
mapping[f"{old_prefix}.kernel_conv.bias"] = f"{new_prefix}.kernel_conv.bias"
# Bias output conv
mapping[f"{old_prefix}.bias_conv.weight_g"] = f"{new_prefix}.bias_conv.weight_g"
mapping[f"{old_prefix}.bias_conv.weight_v"] = f"{new_prefix}.bias_conv.weight_v"
mapping[f"{old_prefix}.bias_conv.bias"] = f"{new_prefix}.bias_conv.bias"
return mapping
def get_key_mapping(config: UnivNetConfig):
mapping = {}
# NOTE: inital conv layer keys are the same
# LVC Residual blocks
for i in range(len(config.resblock_stride_sizes)):
# LVCBlock initial convt layer
mapping[f"res_stack.{i}.convt_pre.1.weight_g"] = f"resblocks.{i}.convt_pre.weight_g"
mapping[f"res_stack.{i}.convt_pre.1.weight_v"] = f"resblocks.{i}.convt_pre.weight_v"
mapping[f"res_stack.{i}.convt_pre.1.bias"] = f"resblocks.{i}.convt_pre.bias"
# Kernel predictor
kernel_predictor_mapping = get_kernel_predictor_key_mapping(
config, old_prefix=f"res_stack.{i}.kernel_predictor", new_prefix=f"resblocks.{i}.kernel_predictor"
)
mapping.update(kernel_predictor_mapping)
# LVC Residual blocks
for j in range(len(config.resblock_dilation_sizes[i])):
mapping[f"res_stack.{i}.conv_blocks.{j}.1.weight_g"] = f"resblocks.{i}.resblocks.{j}.conv.weight_g"
mapping[f"res_stack.{i}.conv_blocks.{j}.1.weight_v"] = f"resblocks.{i}.resblocks.{j}.conv.weight_v"
mapping[f"res_stack.{i}.conv_blocks.{j}.1.bias"] = f"resblocks.{i}.resblocks.{j}.conv.bias"
# Output conv layer
mapping["conv_post.1.weight_g"] = "conv_post.weight_g"
mapping["conv_post.1.weight_v"] = "conv_post.weight_v"
mapping["conv_post.1.bias"] = "conv_post.bias"
return mapping
def rename_state_dict(state_dict, keys_to_modify, keys_to_remove):
model_state_dict = {}
for key, value in state_dict.items():
if key in keys_to_remove:
continue
if key in keys_to_modify:
new_key = keys_to_modify[key]
model_state_dict[new_key] = value
else:
model_state_dict[key] = value
return model_state_dict
def convert_univnet_checkpoint(
checkpoint_path,
pytorch_dump_folder_path,
config_path=None,
repo_id=None,
safe_serialization=False,
):
model_state_dict_base = torch.load(checkpoint_path, map_location="cpu")
# Get the generator's state dict
state_dict = model_state_dict_base["model_g"]
if config_path is not None:
config = UnivNetConfig.from_pretrained(config_path)
else:
config = UnivNetConfig()
keys_to_modify = get_key_mapping(config)
keys_to_remove = set()
hf_state_dict = rename_state_dict(state_dict, keys_to_modify, keys_to_remove)
model = UnivNetModel(config)
# Apply weight norm since the original checkpoint has weight norm applied
model.apply_weight_norm()
model.load_state_dict(hf_state_dict)
# Remove weight norm in preparation for inference
model.remove_weight_norm()
model.save_pretrained(pytorch_dump_folder_path, safe_serialization=safe_serialization)
if repo_id:
print("Pushing to the hub...")
model.push_to_hub(repo_id)
def main():
parser = argparse.ArgumentParser()
parser.add_argument("--checkpoint_path", required=True, default=None, type=str, help="Path to original checkpoint")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
parser.add_argument(
"--pytorch_dump_folder_path", required=True, default=None, type=str, help="Path to the output PyTorch model."
)
parser.add_argument(
"--push_to_hub", default=None, type=str, help="Where to upload the converted model on the 🤗 hub."
)
parser.add_argument(
"--safe_serialization", action="store_true", help="Whether to save the model using `safetensors`."
)
args = parser.parse_args()
convert_univnet_checkpoint(
args.checkpoint_path,
args.pytorch_dump_folder_path,
args.config_path,
args.push_to_hub,
args.safe_serialization,
)
if __name__ == "__main__":
main()
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/univnet/__init__.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_torch_available,
)
_import_structure = {
"configuration_univnet": [
"UNIVNET_PRETRAINED_CONFIG_ARCHIVE_MAP",
"UnivNetConfig",
],
"feature_extraction_univnet": ["UnivNetFeatureExtractor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_univnet"] = [
"UNIVNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"UnivNetModel",
]
if TYPE_CHECKING:
from .configuration_univnet import (
UNIVNET_PRETRAINED_CONFIG_ARCHIVE_MAP,
UnivNetConfig,
)
from .feature_extraction_univnet import UnivNetFeatureExtractor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_univnet import (
UNIVNET_PRETRAINED_MODEL_ARCHIVE_LIST,
UnivNetModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/univnet/modeling_univnet.py | # Copyright 2023 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch UnivNetModel model."""
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from ...modeling_utils import ModelOutput, PreTrainedModel
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_univnet import UnivNetConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "UnivNetConfig"
_CHECKPOINT_FOR_DOC = "dg845/univnet-dev"
UNIVNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"dg845/univnet-dev",
# See all UnivNet models at https://huggingface.co/models?filter=univnet
]
@dataclass
class UnivNetModelOutput(ModelOutput):
"""
Output class for the [`UnivNetModel`], which includes the generated audio waveforms and the original unpadded
lengths of those waveforms (so that the padding can be removed by [`UnivNetModel.batch_decode`]).
Args:
waveforms (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Batched 1D (mono-channel) output audio waveforms.
waveform_lengths (`torch.FloatTensor` of shape `(batch_size,)`):
The batched length in samples of each unpadded waveform in `waveforms`.
"""
waveforms: torch.FloatTensor = None
waveform_lengths: torch.FloatTensor = None
class UnivNetKernelPredictorResidualBlock(nn.Module):
"""
Implementation of the residual block for the kernel predictor network inside each location variable convolution
block (LVCBlock).
Parameters:
config: (`UnivNetConfig`):
Config for the `UnivNetModel` model.
"""
def __init__(
self,
config: UnivNetConfig,
):
super().__init__()
self.channels = config.model_in_channels
self.kernel_size = config.kernel_predictor_conv_size
self.dropout_prob = config.kernel_predictor_dropout
self.leaky_relu_slope = config.leaky_relu_slope
padding = (self.kernel_size - 1) // 2
self.dropout = nn.Dropout(self.dropout_prob)
self.conv1 = nn.Conv1d(self.channels, self.channels, self.kernel_size, padding=padding, bias=True)
self.conv2 = nn.Conv1d(self.channels, self.channels, self.kernel_size, padding=padding, bias=True)
def forward(self, hidden_states: torch.FloatTensor):
# hidden_states should have shape (batch_size, channels, seq_length)
residual = hidden_states
hidden_states = self.dropout(hidden_states)
hidden_states = self.conv1(hidden_states)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = self.conv2(hidden_states)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
return hidden_states + residual
def apply_weight_norm(self):
nn.utils.weight_norm(self.conv1)
nn.utils.weight_norm(self.conv2)
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.conv1)
nn.utils.remove_weight_norm(self.conv2)
class UnivNetKernelPredictor(nn.Module):
"""
Implementation of the kernel predictor network which supplies the kernel and bias for the location variable
convolutional layers (LVCs) in each UnivNet LVCBlock.
Based on the KernelPredictor implementation in
[maum-ai/univnet](https://github.com/maum-ai/univnet/blob/9bb2b54838bb6d7ce767131cc7b8b61198bc7558/model/lvcnet.py#L7).
Parameters:
config: (`UnivNetConfig`):
Config for the `UnivNetModel` model.
conv_kernel_size (`int`, *optional*, defaults to 3):
The kernel size for the location variable convolutional layer kernels (convolutional weight tensor).
conv_layers (`int`, *optional*, defaults to 4):
The number of location variable convolutional layers to output kernels and biases for.
"""
def __init__(
self,
config: UnivNetConfig,
conv_kernel_size: int = 3,
conv_layers: int = 4,
):
super().__init__()
self.conv_in_channels = config.model_hidden_channels
self.conv_out_channels = 2 * config.model_hidden_channels
self.conv_kernel_size = conv_kernel_size
self.conv_layers = conv_layers
self.kernel_channels = (
self.conv_in_channels * self.conv_out_channels * self.conv_kernel_size * self.conv_layers
)
self.bias_channels = self.conv_out_channels * self.conv_layers
self.resnet_in_channels = config.num_mel_bins
self.resnet_hidden_channels = config.kernel_predictor_hidden_channels
self.resnet_kernel_size = config.kernel_predictor_conv_size
self.num_blocks = config.kernel_predictor_num_blocks
self.leaky_relu_slope = config.leaky_relu_slope
padding = (self.resnet_kernel_size - 1) // 2
self.input_conv = nn.Conv1d(self.resnet_in_channels, self.resnet_hidden_channels, 5, padding=2, bias=True)
self.resblocks = nn.ModuleList([UnivNetKernelPredictorResidualBlock(config) for _ in range(self.num_blocks)])
self.kernel_conv = nn.Conv1d(
self.resnet_hidden_channels, self.kernel_channels, self.resnet_kernel_size, padding=padding, bias=True
)
self.bias_conv = nn.Conv1d(
self.resnet_hidden_channels, self.bias_channels, self.resnet_kernel_size, padding=padding, bias=True
)
def forward(self, spectrogram: torch.FloatTensor):
"""
Maps a conditioning log-mel spectrogram to a tensor of convolutional kernels and biases, for use in location
variable convolutional layers. Note that the input spectrogram should have shape (batch_size, input_channels,
seq_length).
Args:
spectrogram (`torch.FloatTensor` of shape `(batch_size, input_channels, seq_length)`):
Tensor containing the log-mel spectrograms.
Returns:
Tuple[`torch.FloatTensor, `torch.FloatTensor`]: tuple of tensors where the first element is the tensor of
location variable convolution kernels of shape `(batch_size, self.conv_layers, self.conv_in_channels,
self.conv_out_channels, self.conv_kernel_size, seq_length)` and the second element is the tensor of
location variable convolution biases of shape `(batch_size, self.conv_layers. self.conv_out_channels,
seq_length)`.
"""
batch_size, _, seq_length = spectrogram.shape
hidden_states = self.input_conv(spectrogram)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
for resblock in self.resblocks:
hidden_states = resblock(hidden_states)
kernel_hidden_states = self.kernel_conv(hidden_states)
bias_hidden_states = self.bias_conv(hidden_states)
# Reshape kernels and biases to appropriate shape
kernels = kernel_hidden_states.view(
batch_size,
self.conv_layers,
self.conv_in_channels,
self.conv_out_channels,
self.conv_kernel_size,
seq_length,
).contiguous()
biases = bias_hidden_states.view(
batch_size,
self.conv_layers,
self.conv_out_channels,
seq_length,
).contiguous()
return kernels, biases
def apply_weight_norm(self):
nn.utils.weight_norm(self.input_conv)
for layer in self.resblocks:
layer.apply_weight_norm()
nn.utils.weight_norm(self.kernel_conv)
nn.utils.weight_norm(self.bias_conv)
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.input_conv)
for layer in self.resblocks:
layer.remove_weight_norm()
nn.utils.remove_weight_norm(self.kernel_conv)
nn.utils.remove_weight_norm(self.bias_conv)
class UnivNetLvcResidualBlock(nn.Module):
"""
Implementation of the location variable convolution (LVC) residual block for the UnivNet residual network.
Parameters:
config: (`UnivNetConfig`):
Config for the `UnivNetModel` model.
kernel_size (`int`):
The kernel size for the dilated 1D convolutional layer.
dilation (`int`):
The dilation for the dilated 1D convolutional layer.
"""
def __init__(
self,
config: UnivNetConfig,
kernel_size: int,
dilation: int,
):
super().__init__()
self.hidden_channels = config.model_hidden_channels
self.kernel_size = kernel_size
self.dilation = dilation
self.leaky_relu_slope = config.leaky_relu_slope
padding = self.dilation * (self.kernel_size - 1) // 2
self.conv = nn.Conv1d(
self.hidden_channels,
self.hidden_channels,
self.kernel_size,
padding=padding,
dilation=self.dilation,
)
def forward(self, hidden_states, kernel, bias, hop_size=256):
residual = hidden_states
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = self.conv(hidden_states)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = self.location_variable_convolution(hidden_states, kernel, bias, hop_size=hop_size)
# Gated activation unit
hidden_states = torch.sigmoid(hidden_states[:, : self.hidden_channels, :]) * torch.tanh(
hidden_states[:, self.hidden_channels :, :]
)
# Skip connection
hidden_states = residual + hidden_states
return hidden_states
# Based on https://github.com/maum-ai/univnet/blob/9bb2b54838bb6d7ce767131cc7b8b61198bc7558/model/lvcnet.py#L171
def location_variable_convolution(
self,
hidden_states: torch.FloatTensor,
kernel: torch.FloatTensor,
bias: torch.FloatTensor,
dilation: int = 1,
hop_size: int = 256,
):
"""
Performs location-variable convolution operation on the input sequence (hidden_states) using the local
convolution kernel. This was introduced in [LVCNet: Efficient Condition-Dependent Modeling Network for Waveform
Generation](https://arxiv.org/abs/2102.10815) by Zhen Zheng, Jianzong Wang, Ning Cheng, and Jing Xiao.
Time: 414 μs ± 309 ns per loop (mean ± std. dev. of 7 runs, 1000 loops each), test on NVIDIA V100.
Args:
hidden_states (`torch.FloatTensor` of shape `(batch_size, in_channels, in_length)`):
The input sequence of shape (batch, in_channels, in_length).
kernel (`torch.FloatTensor` of shape `(batch_size, in_channels, out_channels, kernel_size, kernel_length)`):
The local convolution kernel of shape (batch, in_channels, out_channels, kernel_size, kernel_length).
bias (`torch.FloatTensor` of shape `(batch_size, out_channels, kernel_length)`):
The bias for the local convolution of shape (batch, out_channels, kernel_length).
dilation (`int`, *optional*, defaults to 1):
The dilation of convolution.
hop_size (`int`, *optional*, defaults to 256):
The hop_size of the conditioning sequence.
Returns:
`torch.FloatTensor`: the output sequence after performing local convolution with shape (batch_size,
out_channels, in_length).
"""
batch, _, in_length = hidden_states.shape
batch, _, out_channels, kernel_size, kernel_length = kernel.shape
if in_length != (kernel_length * hop_size):
raise ValueError(
f"Dim 2 of `hidden_states` should be {kernel_length * hop_size}) but got {in_length}. Please check"
" `hidden_states` or `kernel` and `hop_size` to make sure they are correct."
)
padding = dilation * int((kernel_size - 1) / 2)
# (batch, in_channels, in_length + 2*padding)
hidden_states = nn.functional.pad(hidden_states, (padding, padding), "constant", 0)
# (batch, in_channels, kernel_length, hop_size + 2*padding)
hidden_states = hidden_states.unfold(2, hop_size + 2 * padding, hop_size)
if hop_size < dilation:
hidden_states = nn.functional.pad(hidden_states, (0, dilation), "constant", 0)
# (batch, in_channels, kernel_length, (hop_size + 2*padding)/dilation, dilation)
hidden_states = hidden_states.unfold(3, dilation, dilation)
hidden_states = hidden_states[:, :, :, :, :hop_size]
# (batch, in_channels, kernel_length, dilation, (hop_size + 2*padding)/dilation)
hidden_states = hidden_states.transpose(3, 4)
# (batch, in_channels, kernel_length, dilation, _, kernel_size)
hidden_states = hidden_states.unfold(4, kernel_size, 1)
# Apply local convolution kernel to hidden_states.
output_hidden_states = torch.einsum("bildsk,biokl->bolsd", hidden_states, kernel)
output_hidden_states = output_hidden_states.to(memory_format=torch.channels_last_3d)
bias = bias.unsqueeze(-1).unsqueeze(-1).to(memory_format=torch.channels_last_3d)
output_hidden_states = output_hidden_states + bias
output_hidden_states = output_hidden_states.contiguous().view(batch, out_channels, -1)
return output_hidden_states
def apply_weight_norm(self):
nn.utils.weight_norm(self.conv)
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.conv)
class UnivNetLvcBlock(nn.Module):
"""
Implementation of the location variable convolution (LVC) residual block of the UnivNet residual block. Includes a
`UnivNetKernelPredictor` inside to predict the kernels and biases of the LVC layers.
Based on LVCBlock in
[maum-ai/univnet](https://github.com/maum-ai/univnet/blob/9bb2b54838bb6d7ce767131cc7b8b61198bc7558/model/lvcnet.py#L98)
Parameters:
config (`UnivNetConfig`):
Config for the `UnivNetModel` model.
layer_id (`int`):
An integer corresponding to the index of the current LVC resnet block layer. This should be between 0 and
`len(config.resblock_stride_sizes) - 1)` inclusive.
lvc_hop_size (`int`, *optional*, defaults to 256):
The hop size for the location variable convolutional layers.
"""
def __init__(
self,
config: UnivNetConfig,
layer_id: int,
lvc_hop_size: int = 256,
):
super().__init__()
self.hidden_channels = config.model_hidden_channels
self.kernel_size = config.resblock_kernel_sizes[layer_id]
self.stride = config.resblock_stride_sizes[layer_id]
self.dilations = config.resblock_dilation_sizes[layer_id]
self.cond_hop_length = lvc_hop_size
self.leaky_relu_slope = config.leaky_relu_slope
self.num_blocks = len(self.dilations)
self.convt_pre = nn.ConvTranspose1d(
self.hidden_channels,
self.hidden_channels,
2 * self.stride,
stride=self.stride,
padding=self.stride // 2 + self.stride % 2,
output_padding=self.stride % 2,
)
self.kernel_predictor = UnivNetKernelPredictor(config, self.kernel_size, self.num_blocks)
self.resblocks = nn.ModuleList(
[UnivNetLvcResidualBlock(config, self.kernel_size, self.dilations[i]) for i in range(self.num_blocks)]
)
def forward(self, hidden_states: torch.FloatTensor, spectrogram: torch.FloatTensor):
# hidden_states: (batch_size, hidden_channels, seq_length)
# spectrogram: (batch_size, cond_channels, cond_length)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = self.convt_pre(hidden_states)
kernels, biases = self.kernel_predictor(spectrogram)
for i, resblock in enumerate(self.resblocks):
kernel = kernels[:, i, :, :, :, :]
bias = biases[:, i, :, :]
hidden_states = resblock(hidden_states, kernel, bias, hop_size=self.cond_hop_length)
return hidden_states
def apply_weight_norm(self):
nn.utils.weight_norm(self.convt_pre)
self.kernel_predictor.apply_weight_norm()
for layer in self.resblocks:
layer.apply_weight_norm()
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.convt_pre)
self.kernel_predictor.remove_weight_norm()
for layer in self.resblocks:
layer.remove_weight_norm()
UNIVNET_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`UnivNetConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
UNIVNET_INPUTS_DOCSTRING = r"""
Converts a noise waveform and a conditioning spectrogram to a speech waveform. Passing a batch of log-mel
spectrograms returns a batch of speech waveforms. Passing a single, un-batched log-mel spectrogram returns a
single, un-batched speech waveform.
Args:
input_features (`torch.FloatTensor`):
Tensor containing the log-mel spectrograms. Can be batched and of shape `(batch_size, sequence_length,
config.num_mel_channels)`, or un-batched and of shape `(sequence_length, config.num_mel_channels)`.
noise_sequence (`torch.FloatTensor`, *optional*):
Tensor containing a noise sequence of standard Gaussian noise. Can be batched and of shape `(batch_size,
sequence_length, config.model_in_channels)`, or un-batched and of shape (sequence_length,
config.model_in_channels)`. If not supplied, will be randomly generated.
padding_mask (`torch.BoolTensor`, *optional*):
Mask indicating which parts of each sequence are padded. Mask values are selected in `[0, 1]`:
- 1 for tokens that are **not masked**
- 0 for tokens that are **masked**
The mask can be batched and of shape `(batch_size, sequence_length)` or un-batched and of shape
`(sequence_length,)`.
generator (`torch.Generator`, *optional*):
A [torch generator](https://pytorch.org/docs/stable/generated/torch.Generator.html) to make generation
deterministic.
return_dict:
Whether to return a [`~utils.ModelOutput`] subclass instead of a plain tuple.
"""
@add_start_docstrings(
"""UnivNet GAN vocoder.""",
UNIVNET_START_DOCSTRING,
)
class UnivNetModel(PreTrainedModel):
config_class = UnivNetConfig
main_input_name = "input_features"
def __init__(self, config: UnivNetConfig):
super().__init__(config)
self.num_kernels = len(config.resblock_kernel_sizes)
self.leaky_relu_slope = config.leaky_relu_slope
self.conv_pre = nn.Conv1d(
config.model_in_channels,
config.model_hidden_channels,
kernel_size=7,
stride=1,
padding=3,
padding_mode="reflect",
)
# Initialize location-variable convolution ResNet Blocks.
num_layers = len(config.resblock_stride_sizes)
hop_length = 1
hop_lengths = []
for stride in config.resblock_stride_sizes:
hop_length = hop_length * stride
hop_lengths.append(hop_length)
self.resblocks = nn.ModuleList(
[
UnivNetLvcBlock(
config,
layer_id=i,
lvc_hop_size=hop_lengths[i],
)
for i in range(num_layers)
]
)
self.conv_post = nn.Conv1d(config.model_hidden_channels, 1, 7, padding=3, padding_mode="reflect")
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(UNIVNET_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=UnivNetModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_features: torch.FloatTensor,
noise_sequence: Optional[torch.FloatTensor] = None,
padding_mask: Optional[torch.FloatTensor] = None,
generator: Optional[torch.Generator] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], UnivNetModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import UnivNetFeatureExtractor, UnivNetModel
>>> from datasets import load_dataset, Audio
>>> model = UnivNetModel.from_pretrained("dg845/univnet-dev")
>>> feature_extractor = UnivNetFeatureExtractor.from_pretrained("dg845/univnet-dev")
>>> ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean", split="validation")
>>> # Resample the audio to the feature extractor's sampling rate.
>>> ds = ds.cast_column("audio", Audio(sampling_rate=feature_extractor.sampling_rate))
>>> inputs = feature_extractor(
... ds[0]["audio"]["array"], sampling_rate=ds[0]["audio"]["sampling_rate"], return_tensors="pt"
... )
>>> audio = model(**inputs).waveforms
>>> list(audio.shape)
[1, 140288]
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Resolve batch sizes for noise_sequence and spectrogram
spectrogram_batched = input_features.dim() == 3
if not spectrogram_batched:
input_features = input_features.unsqueeze(0)
spectrogram_batch_size, spectrogram_length, _ = input_features.shape
if noise_sequence is not None:
noise_sequence_batched = noise_sequence.dim() == 3
if not noise_sequence_batched:
noise_sequence = noise_sequence.unsqueeze(0)
else:
# Randomly generate noise_sequence
noise_sequence_shape = (spectrogram_batch_size, spectrogram_length, self.config.model_in_channels)
noise_sequence = torch.randn(
noise_sequence_shape, generator=generator, dtype=input_features.dtype, device=input_features.device
)
noise_sequence_batch_size = noise_sequence.shape[0]
if spectrogram_batch_size > 1 and noise_sequence_batch_size == 1:
# Repeat noise_sequence spectrogram_batch_size times
noise_sequence = noise_sequence.repeat(spectrogram_batch_size, 1, 1)
elif noise_sequence_batch_size > 1 and spectrogram_batch_size == 1:
# Repeat spectrogram noise_sequence_batch_size times
input_features = input_features.repeat(noise_sequence_batch_size, 1, 1)
if noise_sequence_batch_size != spectrogram_batch_size:
raise ValueError(
f"The batch size of `noise_sequence` is {noise_sequence_batch_size} and the batch size of"
f" `input_features` is {spectrogram_batch_size}, but the two are expected to be equal."
)
if padding_mask is not None:
if padding_mask.dim() == 1:
padding_mask = padding_mask.unsqueeze(0)
padding_mask_batch_size = padding_mask.shape[0]
if padding_mask_batch_size != spectrogram_batch_size:
raise ValueError(
f"The batch size of `padding_mask` is {padding_mask_batch_size} and the batch size of"
f" `input_features` is {spectrogram_batch_size}, but the two are expected to be equal."
)
# Change shapes to have channels before sequence lengths
hidden_states = noise_sequence.transpose(2, 1)
input_features = input_features.transpose(2, 1)
hidden_states = self.conv_pre(hidden_states)
for resblock in self.resblocks:
hidden_states = resblock(hidden_states, input_features)
hidden_states = nn.functional.leaky_relu(hidden_states, self.leaky_relu_slope)
hidden_states = self.conv_post(hidden_states)
hidden_states = torch.tanh(hidden_states)
# Remove sequence length dimension since this collapses to 1
# NOTE: keep waveforms batched even if there's only one
waveform = hidden_states.squeeze(1)
# Get sequence lengths for UnivNetFeatureExtractor.batch_decode.
waveform_lengths = None
if padding_mask is not None:
# Padding is always contiguous and added on the right
waveform_lengths = torch.sum(padding_mask, dim=1)
if not return_dict:
outputs = (waveform, waveform_lengths)
return outputs
return UnivNetModelOutput(
waveforms=waveform,
waveform_lengths=waveform_lengths,
)
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, (nn.Linear, nn.Conv1d, nn.ConvTranspose1d)):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
def apply_weight_norm(self):
nn.utils.weight_norm(self.conv_pre)
for layer in self.resblocks:
layer.apply_weight_norm()
nn.utils.weight_norm(self.conv_post)
def remove_weight_norm(self):
nn.utils.remove_weight_norm(self.conv_pre)
for layer in self.resblocks:
layer.remove_weight_norm()
nn.utils.remove_weight_norm(self.conv_post)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_sentencepiece_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_big_bird": ["BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP", "BigBirdConfig", "BigBirdOnnxConfig"],
}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_big_bird"] = ["BigBirdTokenizer"]
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_big_bird_fast"] = ["BigBirdTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_big_bird"] = [
"BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST",
"BigBirdForCausalLM",
"BigBirdForMaskedLM",
"BigBirdForMultipleChoice",
"BigBirdForPreTraining",
"BigBirdForQuestionAnswering",
"BigBirdForSequenceClassification",
"BigBirdForTokenClassification",
"BigBirdLayer",
"BigBirdModel",
"BigBirdPreTrainedModel",
"load_tf_weights_in_big_bird",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_big_bird"] = [
"FlaxBigBirdForCausalLM",
"FlaxBigBirdForMaskedLM",
"FlaxBigBirdForMultipleChoice",
"FlaxBigBirdForPreTraining",
"FlaxBigBirdForQuestionAnswering",
"FlaxBigBirdForSequenceClassification",
"FlaxBigBirdForTokenClassification",
"FlaxBigBirdModel",
"FlaxBigBirdPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_big_bird import BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP, BigBirdConfig, BigBirdOnnxConfig
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_big_bird import BigBirdTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_big_bird_fast import BigBirdTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_big_bird import (
BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST,
BigBirdForCausalLM,
BigBirdForMaskedLM,
BigBirdForMultipleChoice,
BigBirdForPreTraining,
BigBirdForQuestionAnswering,
BigBirdForSequenceClassification,
BigBirdForTokenClassification,
BigBirdLayer,
BigBirdModel,
BigBirdPreTrainedModel,
load_tf_weights_in_big_bird,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_big_bird import (
FlaxBigBirdForCausalLM,
FlaxBigBirdForMaskedLM,
FlaxBigBirdForMultipleChoice,
FlaxBigBirdForPreTraining,
FlaxBigBirdForQuestionAnswering,
FlaxBigBirdForSequenceClassification,
FlaxBigBirdForTokenClassification,
FlaxBigBirdModel,
FlaxBigBirdPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/convert_bigbird_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert BigBird checkpoint."""
import argparse
from transformers import BigBirdConfig, BigBirdForPreTraining, BigBirdForQuestionAnswering, load_tf_weights_in_big_bird
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_checkpoint_path, big_bird_config_file, pytorch_dump_path, is_trivia_qa):
# Initialise PyTorch model
config = BigBirdConfig.from_json_file(big_bird_config_file)
print(f"Building PyTorch model from configuration: {config}")
if is_trivia_qa:
model = BigBirdForQuestionAnswering(config)
else:
model = BigBirdForPreTraining(config)
# Load weights from tf checkpoint
load_tf_weights_in_big_bird(model, tf_checkpoint_path, is_trivia_qa=is_trivia_qa)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
model.save_pretrained(pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--big_bird_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained BERT model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--is_trivia_qa", action="store_true", help="Whether to convert a model with a trivia_qa head."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(
args.tf_checkpoint_path, args.big_bird_config_file, args.pytorch_dump_path, args.is_trivia_qa
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/tokenization_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for BigBird."""
import os
import re
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple
import sentencepiece as spm
from ...tokenization_utils import AddedToken, PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "spiece.model"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/spiece.model",
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/spiece.model"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/spiece.model"
),
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"google/bigbird-roberta-base": 4096,
"google/bigbird-roberta-large": 4096,
"google/bigbird-base-trivia-itc": 4096,
}
class BigBirdTokenizer(PreTrainedTokenizer):
"""
Construct a BigBird tokenizer. Based on [SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
[SentencePiece](https://github.com/google/sentencepiece) file (generally has a *.spm* extension) that
contains the vocabulary necessary to instantiate a tokenizer.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The begin of sequence token.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
prefix_tokens: List[int] = []
def __init__(
self,
vocab_file,
unk_token="<unk>",
bos_token="<s>",
eos_token="</s>",
pad_token="<pad>",
sep_token="[SEP]",
mask_token="[MASK]",
cls_token="[CLS]",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
self.vocab_file = vocab_file
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(vocab_file)
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
pad_token=pad_token,
sep_token=sep_token,
mask_token=mask_token,
cls_token=cls_token,
sp_model_kwargs=self.sp_model_kwargs,
**kwargs,
)
@property
def vocab_size(self):
return self.sp_model.get_piece_size()
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
return state
def __setstate__(self, d):
self.__dict__ = d
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(self.vocab_file)
def _tokenize(self, text: str) -> List[str]:
"""Take as input a string and return a list of strings (tokens) for words/sub-words"""
return self.sp_model.encode(text, out_type=str)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.sp_model.piece_to_id(token)
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
token = self.sp_model.IdToPiece(index)
return token
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
current_sub_tokens = []
out_string = ""
prev_is_special = False
for token in tokens:
# make sure that special tokens are not decoded using sentencepiece model
if token in self.all_special_tokens:
if not prev_is_special:
out_string += " "
out_string += self.sp_model.decode(current_sub_tokens) + token
prev_is_special = True
current_sub_tokens = []
else:
current_sub_tokens.append(token)
prev_is_special = False
out_string += self.sp_model.decode(current_sub_tokens)
return out_string.strip()
def _decode(
self,
token_ids: List[int],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = None,
spaces_between_special_tokens: bool = True,
**kwargs,
) -> str:
self._decode_use_source_tokenizer = kwargs.pop("use_source_tokenizer", False)
filtered_tokens = self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens)
# To avoid mixing byte-level and unicode for byte-level BPT
# we need to build string separately for added tokens and byte-level tokens
# cf. https://github.com/huggingface/transformers/issues/1133
sub_texts = []
current_sub_text = []
for token in filtered_tokens:
if skip_special_tokens and token in self.all_special_ids:
continue
if token in self.added_tokens_encoder:
if current_sub_text:
sub_texts.append(self.convert_tokens_to_string(current_sub_text))
current_sub_text = []
sub_texts.append(token)
else:
current_sub_text.append(token)
if current_sub_text:
sub_texts.append(self.convert_tokens_to_string(current_sub_text))
# Mimic the behavior of the Rust tokenizer:
# No space before [MASK] and [SEP]
if spaces_between_special_tokens:
text = re.sub(r" (\[(MASK|SEP)\])", r"\1", " ".join(sub_texts))
else:
text = "".join(sub_texts)
clean_up_tokenization_spaces = (
clean_up_tokenization_spaces
if clean_up_tokenization_spaces is not None
else self.clean_up_tokenization_spaces
)
if clean_up_tokenization_spaces:
clean_text = self.clean_up_tokenization(text)
return clean_text
else:
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
return (out_vocab_file,)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A Big Bird sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A BERT sequence
pair mask has the following format: :: 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 | first sequence | second
sequence | If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/configuration_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" BigBird model configuration"""
from collections import OrderedDict
from typing import Mapping
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/config.json",
"google/bigbird-roberta-large": "https://huggingface.co/google/bigbird-roberta-large/resolve/main/config.json",
"google/bigbird-base-trivia-itc": "https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/config.json",
# See all BigBird models at https://huggingface.co/models?filter=big_bird
}
class BigBirdConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`BigBirdModel`]. It is used to instantiate an
BigBird model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the BigBird
[google/bigbird-roberta-base](https://huggingface.co/google/bigbird-roberta-base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50358):
Vocabulary size of the BigBird model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`BigBirdModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimension of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimension of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu_new"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 1024 or 2048 or 4096).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`BigBirdModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
attention_type (`str`, *optional*, defaults to `"block_sparse"`)
Whether to use block sparse attention (with n complexity) as introduced in paper or original attention
layer (with n^2 complexity). Possible values are `"original_full"` and `"block_sparse"`.
use_bias (`bool`, *optional*, defaults to `True`)
Whether to use bias in query, key, value.
rescale_embeddings (`bool`, *optional*, defaults to `False`)
Whether to rescale embeddings with (hidden_size ** 0.5).
block_size (`int`, *optional*, defaults to 64)
Size of each block. Useful only when `attention_type == "block_sparse"`.
num_random_blocks (`int`, *optional*, defaults to 3)
Each query is going to attend these many number of random blocks. Useful only when `attention_type ==
"block_sparse"`.
classifier_dropout (`float`, *optional*):
The dropout ratio for the classification head.
Example:
```python
>>> from transformers import BigBirdConfig, BigBirdModel
>>> # Initializing a BigBird google/bigbird-roberta-base style configuration
>>> configuration = BigBirdConfig()
>>> # Initializing a model (with random weights) from the google/bigbird-roberta-base style configuration
>>> model = BigBirdModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "big_bird"
def __init__(
self,
vocab_size=50358,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu_new",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=4096,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
use_cache=True,
pad_token_id=0,
bos_token_id=1,
eos_token_id=2,
sep_token_id=66,
attention_type="block_sparse",
use_bias=True,
rescale_embeddings=False,
block_size=64,
num_random_blocks=3,
classifier_dropout=None,
**kwargs,
):
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
sep_token_id=sep_token_id,
**kwargs,
)
self.vocab_size = vocab_size
self.max_position_embeddings = max_position_embeddings
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.type_vocab_size = type_vocab_size
self.layer_norm_eps = layer_norm_eps
self.use_cache = use_cache
self.rescale_embeddings = rescale_embeddings
self.attention_type = attention_type
self.use_bias = use_bias
self.block_size = block_size
self.num_random_blocks = num_random_blocks
self.classifier_dropout = classifier_dropout
class BigBirdOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task == "multiple-choice":
dynamic_axis = {0: "batch", 1: "choice", 2: "sequence"}
else:
dynamic_axis = {0: "batch", 1: "sequence"}
return OrderedDict(
[
("input_ids", dynamic_axis),
("attention_mask", dynamic_axis),
]
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/tokenization_big_bird_fast.py | # coding=utf-8
# Copyright 2018 Google AI, Google Brain and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Tokenization classes for Big Bird model."""
import os
from shutil import copyfile
from typing import List, Optional, Tuple
from ...tokenization_utils import AddedToken
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from ...utils import is_sentencepiece_available, logging
if is_sentencepiece_available():
from .tokenization_big_bird import BigBirdTokenizer
else:
BigBirdTokenizer = None
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "spiece.model", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/spiece.model",
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/spiece.model"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/spiece.model"
),
},
"tokenizer_file": {
"google/bigbird-roberta-base": (
"https://huggingface.co/google/bigbird-roberta-base/resolve/main/tokenizer.json"
),
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/tokenizer.json"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/tokenizer.json"
),
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"google/bigbird-roberta-base": 4096,
"google/bigbird-roberta-large": 4096,
"google/bigbird-base-trivia-itc": 4096,
}
SPIECE_UNDERLINE = "▁"
class BigBirdTokenizerFast(PreTrainedTokenizerFast):
"""
Construct a "fast" BigBird tokenizer (backed by HuggingFace's *tokenizers* library). Based on
[Unigram](https://huggingface.co/docs/tokenizers/python/latest/components.html?highlight=unigram#models). This
tokenizer inherits from [`PreTrainedTokenizerFast`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods
Args:
vocab_file (`str`):
[SentencePiece](https://github.com/google/sentencepiece) file (generally has a *.spm* extension) that
contains the vocabulary necessary to instantiate a tokenizer.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token. .. note:: When building a sequence using special tokens, this is not the token
that is used for the end of sequence. The token used is the `sep_token`.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
slow_tokenizer_class = BigBirdTokenizer
model_input_names = ["input_ids", "attention_mask"]
prefix_tokens: List[int] = []
def __init__(
self,
vocab_file=None,
tokenizer_file=None,
unk_token="<unk>",
bos_token="<s>",
eos_token="</s>",
pad_token="<pad>",
sep_token="[SEP]",
mask_token="[MASK]",
cls_token="[CLS]",
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
super().__init__(
vocab_file,
tokenizer_file=tokenizer_file,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
**kwargs,
)
self.vocab_file = vocab_file
@property
def can_save_slow_tokenizer(self) -> bool:
return os.path.isfile(self.vocab_file) if self.vocab_file else False
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An BigBird sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: list of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return cls + token_ids_0 + sep
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieves sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of ids.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Set to True if the token list is already formatted with special tokens for the model
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
if token_ids_1 is not None:
raise ValueError(
"You should not supply a second sequence if the provided sequence of "
"ids is already formatted with special tokens for the model."
)
return [1 if x in [self.sep_token_id, self.cls_token_id] else 0 for x in token_ids_0]
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Creates a mask from the two sequences passed to be used in a sequence-pair classification task. An ALBERT
sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
if token_ids_1 is None, only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of ids.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not self.can_save_slow_tokenizer:
raise ValueError(
"Your fast tokenizer does not have the necessary information to save the vocabulary for a slow "
"tokenizer."
)
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file):
copyfile(self.vocab_file, out_vocab_file)
return (out_vocab_file,)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/modeling_flax_big_bird.py | # coding=utf-8
# Copyright 2021 The Google Flax Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Callable, Optional, Tuple
import flax
import flax.linen as nn
import jax
import jax.numpy as jnp
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen import partitioning as nn_partitioning
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax import lax
from ...modeling_flax_outputs import (
FlaxBaseModelOutputWithPastAndCrossAttentions,
FlaxBaseModelOutputWithPooling,
FlaxBaseModelOutputWithPoolingAndCrossAttentions,
FlaxCausalLMOutputWithCrossAttentions,
FlaxMaskedLMOutput,
FlaxMultipleChoiceModelOutput,
FlaxSequenceClassifierOutput,
FlaxTokenClassifierOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_call_sample_docstring,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import ModelOutput, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_big_bird import BigBirdConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/bigbird-roberta-base"
_CONFIG_FOR_DOC = "BigBirdConfig"
remat = nn_partitioning.remat
@flax.struct.dataclass
class FlaxBigBirdForPreTrainingOutput(ModelOutput):
"""
Output type of [`BigBirdForPreTraining`].
Args:
prediction_logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`jnp.ndarray` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
prediction_logits: jnp.ndarray = None
seq_relationship_logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxBigBirdForQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
start_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
pooled_output (`jnp.ndarray` of shape `(batch_size, hidden_size)`):
pooled_output returned by FlaxBigBirdModel.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
start_logits: jnp.ndarray = None
end_logits: jnp.ndarray = None
pooled_output: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
BIG_BIRD_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading, saving and converting weights from PyTorch models)
This model is also a
[flax.linen.Module](https://flax.readthedocs.io/en/latest/api_reference/flax.linen/module.html) subclass. Use it as
a regular Flax linen Module and refer to the Flax documentation for all matter related to general usage and
behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`BigBirdConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
BIG_BIRD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`numpy.ndarray` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`numpy.ndarray` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`numpy.ndarray` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`numpy.ndarray` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
head_mask (`numpy.ndarray` of shape `({0})`, `optional):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class FlaxBigBirdEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertEmbeddings.setup
def setup(self):
self.word_embeddings = nn.Embed(
self.config.vocab_size,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.position_embeddings = nn.Embed(
self.config.max_position_embeddings,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.token_type_embeddings = nn.Embed(
self.config.type_vocab_size,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, input_ids, token_type_ids, position_ids, attention_mask, deterministic: bool = True):
# Embed
inputs_embeds = self.word_embeddings(input_ids.astype("i4"))
position_embeds = self.position_embeddings(position_ids.astype("i4"))
token_type_embeddings = self.token_type_embeddings(token_type_ids.astype("i4"))
if self.config.rescale_embeddings:
inputs_embeds *= self.config.hidden_size**0.5
# Sum all embeddings
hidden_states = inputs_embeds + token_type_embeddings + position_embeds
# Layer Norm
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertSelfAttention with Bert->BigBird
class FlaxBigBirdSelfAttention(nn.Module):
config: BigBirdConfig
causal: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.head_dim = self.config.hidden_size // self.config.num_attention_heads
if self.config.hidden_size % self.config.num_attention_heads != 0:
raise ValueError(
"`config.hidden_size`: {self.config.hidden_size} has to be a multiple of `config.num_attention_heads` "
" : {self.config.num_attention_heads}"
)
self.query = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.key = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.value = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
if self.causal:
self.causal_mask = make_causal_mask(
jnp.ones((1, self.config.max_position_embeddings), dtype="bool"), dtype="bool"
)
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.config.num_attention_heads, self.head_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.config.hidden_size,))
@nn.compact
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartAttention._concatenate_to_cache
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = lax.dynamic_update_slice(cached_key.value, key, indices)
value = lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
key_value_states: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic=True,
output_attentions: bool = False,
):
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size = hidden_states.shape[0]
# get query proj
query_states = self.query(hidden_states)
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self.key(key_value_states)
value_states = self.value(key_value_states)
else:
# self_attention
key_states = self.key(hidden_states)
value_states = self.value(hidden_states)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# handle cache prepare causal attention mask
if self.causal:
query_length, key_length = query_states.shape[1], key_states.shape[1]
if self.has_variable("cache", "cached_key"):
mask_shift = self.variables["cache"]["cache_index"]
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_mask = lax.dynamic_slice(
self.causal_mask, (0, 0, mask_shift, 0), (1, 1, query_length, max_decoder_length)
)
else:
causal_mask = self.causal_mask[:, :, :query_length, :key_length]
causal_mask = jnp.broadcast_to(causal_mask, (batch_size,) + causal_mask.shape[1:])
# combine masks if needed
if attention_mask is not None and self.causal:
attention_mask = jnp.broadcast_to(jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_mask.shape)
attention_mask = combine_masks(attention_mask, causal_mask)
elif self.causal:
attention_mask = causal_mask
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# Convert the boolean attention mask to an attention bias.
if attention_mask is not None:
# attention mask in the form of attention bias
attention_bias = lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, jnp.finfo(self.dtype).min).astype(self.dtype),
)
else:
attention_bias = None
dropout_rng = None
if not deterministic and self.config.attention_probs_dropout_prob > 0.0:
dropout_rng = self.make_rng("dropout")
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.config.attention_probs_dropout_prob,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = jnp.einsum("...hqk,h->...hqk", attn_weights, layer_head_mask)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
attn_output = attn_output.reshape(attn_output.shape[:2] + (-1,))
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
class FlaxBigBirdBlockSparseAttention(nn.Module):
config: BigBirdConfig
block_sparse_seed: int = None
dtype: jnp.dtype = jnp.float32
def setup(self):
self.query = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.key = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.value = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
@staticmethod
def transpose_for_scores(x, n_heads, head_size):
new_x_shape = x.shape[:-1] + (n_heads, head_size)
x = x.reshape(*new_x_shape)
return jnp.transpose(x, axes=(0, 2, 1, 3))
def __call__(
self,
hidden_states,
attention_mask,
deterministic=True,
output_attentions=False,
):
n_heads = self.config.num_attention_heads
head_size = self.config.hidden_size // n_heads
blocked_encoder_mask, band_mask, from_mask, to_mask = self.create_masks_for_block_sparse_attn(
attention_mask, self.config.block_size
)
query_layer = self.transpose_for_scores(self.query(hidden_states), n_heads, head_size)
key_layer = self.transpose_for_scores(self.key(hidden_states), n_heads, head_size)
value_layer = self.transpose_for_scores(self.value(hidden_states), n_heads, head_size)
indices_prng_key = None
if not deterministic:
indices_prng_key = self.make_rng("indices")
attn_output, attn_weights = self.bigbird_block_sparse_attention(
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
blocked_encoder_mask,
n_heads,
head_size,
indices_prng_key=indices_prng_key,
deterministic=deterministic,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=output_attentions,
)
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
@staticmethod
def create_masks_for_block_sparse_attn(attention_mask, block_size: int):
batch_size, seq_length = attention_mask.shape
if seq_length % block_size != 0:
raise ValueError(
f"Sequence length must be multiple of block size, but sequence length is {seq_length}, while block"
f" size is {block_size}."
)
def create_band_mask_from_inputs(from_blocked_mask, to_blocked_mask):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
Returns:
float Tensor of shape [batch_size, 1, from_seq_length//from_block_size-4, from_block_size,
3*to_block_size].
"""
exp_blocked_to_pad = jnp.concatenate(
[to_blocked_mask[:, 1:-3], to_blocked_mask[:, 2:-2], to_blocked_mask[:, 3:-1]], axis=2
)
band_mask = jnp.einsum("blq,blk->blqk", from_blocked_mask[:, 2:-2], exp_blocked_to_pad)
band_mask = jnp.expand_dims(band_mask, 1)
return band_mask
blocked_encoder_mask = attention_mask.reshape(batch_size, seq_length // block_size, block_size)
band_mask = create_band_mask_from_inputs(blocked_encoder_mask, blocked_encoder_mask)
from_mask = attention_mask.reshape(batch_size, 1, seq_length, 1)
to_mask = attention_mask.reshape(batch_size, 1, 1, seq_length)
return blocked_encoder_mask, band_mask, from_mask, to_mask
def bigbird_block_sparse_attention(
self,
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
n_heads,
head_size,
indices_prng_key: Optional[jax.random.PRNGKey] = None,
deterministic: Optional[bool] = True,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=None,
):
# BigBird block-sparse attention as suggested in paper
# ITC:
# global tokens: 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# ETC:
# global tokens: extra_globals_tokens + 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# Note:
# 1) Currently, ETC is not supported.
# 2) Window size is fixed to 3 blocks & it can be changed only by
# changing `block_size`.
# 3) Number of global blocks are fixed (2 blocks here) & global tokens can be
# controlled only by `block_size`.
# attention is calculated separately for q[0], q[1], q[2:-2], q[-2], q[-1] in order to use special trick of
# shifting tokens (for calculating sliding attention). hence following code can be divided into 5 parts.
bsz, _, from_seq_len, _ = query_layer.shape
to_seq_len = key_layer.shape[2]
from_block_size = to_block_size = self.config.block_size
if from_seq_len % from_block_size != 0:
raise ValueError("Query sided sequence length must be multiple of block size")
if to_seq_len % to_block_size != 0:
raise ValueError("Key/Value sided sequence length must be multiple of block size")
if from_seq_len // from_block_size != to_seq_len // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
n_rand_blocks = self.config.num_random_blocks
rsqrt_d = 1 / jnp.sqrt(head_size)
attn_mask_penalty = -10000.0
if from_seq_len in [1024, 3072, 4096]: # old plans used in paper
max_seqlen = self.config.max_position_embeddings
rand_attn = [
self._bigbird_block_rand_mask(
max_seqlen,
max_seqlen,
from_block_size,
to_block_size,
n_rand_blocks,
indices_prng_key=indices_prng_key,
deterministic=deterministic,
last_idx=1024,
)[: (from_seq_len // from_block_size - 2)]
for _ in range(n_heads)
]
else:
if plan_from_length is None:
plan_from_length, plan_num_rand_blocks = self._get_rand_attn_plan(
from_seq_len, from_block_size, n_rand_blocks
)
rand_attn = self._bigbird_block_rand_mask_with_head(
from_seq_length=from_seq_len,
to_seq_length=to_seq_len,
from_block_size=from_block_size,
to_block_size=to_block_size,
num_heads=n_heads,
plan_from_length=plan_from_length,
plan_num_rand_blocks=plan_num_rand_blocks,
indices_prng_key=indices_prng_key,
)
rand_attn = jnp.stack(rand_attn, axis=0)
rand_attn = jnp.broadcast_to(rand_attn, (bsz,) + rand_attn.shape)
rand_mask = self._create_rand_mask_from_inputs(
from_blocked_mask, to_blocked_mask, rand_attn, n_heads, n_rand_blocks, bsz, from_seq_len, from_block_size
)
blocked_query_matrix = query_layer.reshape(bsz, n_heads, from_seq_len // from_block_size, from_block_size, -1)
blocked_key_matrix = key_layer.reshape(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
blocked_value_matrix = value_layer.reshape(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
shape = (bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1)
gathered_key = self.jax_gather(blocked_key_matrix, rand_attn, batch_dims=2).reshape(*shape)
gathered_value = self.jax_gather(blocked_value_matrix, rand_attn, batch_dims=2).reshape(*shape)
# 1st PART
# 1st block (global block) attention scores
# q[0] x (k[0], k[1], k[2], k[3], k[4] .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
first_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, 0], key_layer)
first_product = first_product * rsqrt_d
first_product += (1.0 - to_mask) * attn_mask_penalty
first_attn_weights = jax.nn.softmax(first_product, axis=-1) # [bsz, n_heads, from_block_size, to_seq_len]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
first_context_layer = jnp.einsum("bhqk,bhkd->bhqd", first_attn_weights, value_layer)
first_context_layer = jnp.expand_dims(first_context_layer, 2)
# 2nd PART
# 2nd block attention scores
# q[1] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> 2nd, 3rd blocks
# global key blocks -> 1st block
second_key_mat = jnp.concatenate(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, 1],
blocked_key_matrix[:, :, 2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, 0],
],
axis=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
second_value_mat = jnp.concatenate(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, 1],
blocked_value_matrix[:, :, 2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, 0],
],
axis=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, 1], second_key_mat)
second_seq_pad = jnp.concatenate(
[
to_mask[:, :, :, : 3 * to_block_size],
to_mask[:, :, :, -to_block_size:],
jnp.ones([bsz, 1, 1, n_rand_blocks * to_block_size], dtype=to_mask.dtype),
],
axis=3,
)
second_rand_pad = jnp.concatenate(
[
jnp.ones([bsz, n_heads, from_block_size, 4 * to_block_size], dtype=rand_mask.dtype),
rand_mask[:, :, 0],
],
axis=3,
)
second_product = second_product * rsqrt_d
second_product += (1.0 - jnp.minimum(second_seq_pad, second_rand_pad)) * attn_mask_penalty
second_attn_weights = jax.nn.softmax(
second_product, axis=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+r)*to_block_size] x [bsz, n_heads, (4+r)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, -1]
second_context_layer = jnp.einsum("bhqk,bhkd->bhqd", second_attn_weights, second_value_mat)
second_context_layer = jnp.expand_dims(second_context_layer, 2)
# 3rd PART
# Middle blocks attention scores
# q[-2:2] x (sliding_keys, random_keys, global_keys)
# sliding attn is calculated using special trick of shifting tokens as discussed in paper
# random keys are generated by taking random indices as per `rand_attn`
# global keys -> 1st & last block
exp_blocked_key_matrix = jnp.concatenate(
[blocked_key_matrix[:, :, 1:-3], blocked_key_matrix[:, :, 2:-2], blocked_key_matrix[:, :, 3:-1]], axis=3
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
exp_blocked_value_matrix = jnp.concatenate(
[blocked_value_matrix[:, :, 1:-3], blocked_value_matrix[:, :, 2:-2], blocked_value_matrix[:, :, 3:-1]],
axis=3,
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
middle_query_matrix = blocked_query_matrix[:, :, 2:-2]
# sliding attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [b, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
inner_band_product = jnp.einsum("bhlqd,bhlkd->bhlqk", middle_query_matrix, exp_blocked_key_matrix)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, 3*to_block_size]
inner_band_product = inner_band_product * rsqrt_d
# randn attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
rand_band_product = jnp.einsum("bhlqd,bhlkd->bhlqk", middle_query_matrix, gathered_key[:, :, 1:-1])
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
rand_band_product = rand_band_product * rsqrt_d
# Including 1st block (since it's global)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
first_band_product = jnp.einsum("bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, 0])
first_band_product = first_band_product * rsqrt_d
# Including last block (since it's global)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
last_band_product = jnp.einsum("bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, -1])
last_band_product = last_band_product * rsqrt_d
# masking padded tokens
inner_band_product += (1.0 - band_mask) * attn_mask_penalty
first_band_product += (1.0 - jnp.expand_dims(to_mask[:, :, :, :to_block_size], 3)) * attn_mask_penalty
last_band_product += (1.0 - jnp.expand_dims(to_mask[:, :, :, -to_block_size:], 3)) * attn_mask_penalty
rand_band_product += (1.0 - rand_mask[:, :, 1:-1]) * attn_mask_penalty
# completing attention scores matrix for all q[-2:2]
band_product = jnp.concatenate(
[first_band_product, inner_band_product, rand_band_product, last_band_product], axis=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# safely doing softmax since attention matrix is completed
attn_weights = jax.nn.softmax(
band_product, axis=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# contribution of sliding keys
# [bsz, n_heads, m//from_block_size-4, from_block_size, 3*to_block_size]
# x [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
context_layer = jnp.einsum(
"bhlqk,bhlkd->bhlqd", attn_weights[:, :, :, :, to_block_size : 4 * to_block_size], exp_blocked_value_matrix
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of random keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
# x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhlkd->bhlqd",
attn_weights[:, :, :, :, 4 * to_block_size : -to_block_size],
gathered_value[:, :, 1:-1],
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of global keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, :to_block_size], blocked_value_matrix[:, :, 0]
)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, -to_block_size:], blocked_value_matrix[:, :, -1]
)
# 4th PART
# last 2nd token attention scores
# q[-2] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> last 3 blocks
# global key block -> 1st block
# random key block -> based on indices stored in `randn_attn`
second_last_key_mat = jnp.concatenate(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, -3],
blocked_key_matrix[:, :, -2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, -1],
],
axis=2,
) # [bsz, n_heads, (4+n_random_blocks)*to_block_size, -1]
second_last_value_mat = jnp.concatenate(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, -3],
blocked_value_matrix[:, :, -2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, -1],
],
axis=2,
) # [bsz, n_heads, (4+r)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_last_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, -2], second_last_key_mat)
second_last_seq_pad = jnp.concatenate(
[
to_mask[:, :, :, :to_block_size],
to_mask[:, :, :, -3 * to_block_size :],
jnp.ones([bsz, 1, 1, n_rand_blocks * to_block_size], dtype=to_mask.dtype),
],
axis=3,
)
second_last_rand_pad = jnp.concatenate(
[
jnp.ones([bsz, n_heads, from_block_size, 4 * to_block_size], dtype=rand_mask.dtype),
rand_mask[:, :, -1],
],
axis=3,
)
second_last_product = second_last_product * rsqrt_d
second_last_product += (1.0 - jnp.minimum(second_last_seq_pad, second_last_rand_pad)) * attn_mask_penalty
second_last_attn_weights = jax.nn.softmax(
second_last_product, axis=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, -1]
second_last_context_layer = jnp.einsum("bhqk,bhkd->bhqd", second_last_attn_weights, second_last_value_mat)
second_last_context_layer = jnp.expand_dims(second_last_context_layer, 2)
# 5th PART
# last block (global) attention scores
# q[-1] x (k[0], k[1], k[2], k[3], .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
last_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, -1], key_layer)
last_product = last_product * rsqrt_d
last_product += (1.0 - to_mask) * attn_mask_penalty
last_attn_weights = jax.nn.softmax(last_product, axis=-1) # [bsz, n_heads, from_block_size, n]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
last_context_layer = jnp.einsum("bhqk,bhkd->bhqd", last_attn_weights, value_layer)
last_context_layer = jnp.expand_dims(last_context_layer, 2)
# combining representations of all tokens
context_layer = jnp.concatenate(
[first_context_layer, second_context_layer, context_layer, second_last_context_layer, last_context_layer],
axis=2,
)
context_layer = context_layer.reshape(bsz, n_heads, from_seq_len, -1) * from_mask
context_layer = jnp.transpose(context_layer, axes=(0, 2, 1, 3)).reshape(bsz, from_seq_len, -1)
attention_probs = None
return context_layer, attention_probs
@staticmethod
def jax_gather(params, indices, batch_dims=2):
"""
Gather the indices from params correctly (equivalent to tf.gather but with modifications)
Args:
params: (bsz, n_heads, num_blocks, block_size, head_dim)
indices: (<num_blocks, 1)
"""
def _jax_gather(params, indices):
return params[indices]
for _ in range(batch_dims):
_jax_gather = jax.vmap(_jax_gather, in_axes=(0, 0))
return _jax_gather(params, indices) # params.shape[:batch_dims] + indices.shape + params.shape[batch_dims+1:]
def _create_rand_mask_from_inputs(
self,
from_blocked_mask,
to_blocked_mask,
broadcasted_rand_attn,
num_attention_heads,
num_random_blocks,
batch_size,
from_seq_length,
from_block_size,
):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size, from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size, to_seq_length//to_block_size, to_block_size].
broadcasted_rand_attn:
[batch_size, num_attention_heads, from_seq_length//from_block_size-2, num_rand_blocks]
num_attention_heads: int. Number of attention heads.
num_random_blocks: int. Number of random chunks per row.
batch_size: int. Batch size for computation.
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
Returns:
float Tensor of shape [batch_size, num_attention_heads, from_seq_length//from_block_size-2,
from_block_size, num_rand_blocks*to_block_size].
"""
num_windows = from_seq_length // from_block_size - 2
rand_mask = self.jax_gather(to_blocked_mask, broadcasted_rand_attn, batch_dims=1)
rand_mask = rand_mask.reshape(
batch_size, num_attention_heads, num_windows, num_random_blocks * from_block_size
)
rand_mask = jnp.einsum("blq,bhlk->bhlqk", from_blocked_mask[:, 1:-1], rand_mask)
return rand_mask
@staticmethod
def _get_rand_attn_plan(from_seq_length, from_block_size, num_rand_blocks):
"""
Gives the plan of where to put random attention.
Args:
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
num_rand_blocks: int. Number of random chunks per row.
Returns:
plan_from_length: ending location of from block plan_num_rand_blocks: number of random ending location for
each block
"""
plan_from_length = []
plan_num_rand_blocks = []
if (2 * num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((2 * num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(0)
elif (num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks // 2)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks - (num_rand_blocks // 2))
else:
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks)
return plan_from_length, plan_num_rand_blocks
@staticmethod
def _bigbird_block_rand_mask(
from_seq_length,
to_seq_length,
from_block_size,
to_block_size,
num_rand_blocks,
indices_prng_key: Optional[jax.random.PRNGKey] = None,
deterministic: Optional[bool] = True,
last_idx: Optional[int] = -1,
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_rand_blocks: int. Number of random chunks per row.
indices_prng_key: jax.random.PRNGKey. PRNG key that is used to perform random jax operations.
deterministic: bool. When False random attention will be used.
last_idx: if -1 then num_rand_blocks blocks chosen anywhere in to sequence,
if positive then num_rand_blocks blocks chosen only up to last_idx.
Returns:
adjacency list of size from_seq_length//from_block_size-2 by num_rand_blocks
"""
# using this method when from_seq_length in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rand_attn = jnp.zeros((from_seq_length // from_block_size - 2, num_rand_blocks), dtype=jnp.int32)
# deterministic nor randomness
if deterministic:
return rand_attn
middle_seq = jnp.arange(1, to_seq_length // to_block_size - 1, dtype=jnp.int32)
last = to_seq_length // to_block_size - 1
if last_idx > (2 * to_block_size):
last = (last_idx // to_block_size) - 1
r = num_rand_blocks # shorthand
for i in range(1, from_seq_length // from_block_size - 1):
start = i - 2
end = i
if i == 1:
seq_values = jax.random.permutation(indices_prng_key, middle_seq[2:last])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
elif i == 2:
seq_values = jax.random.permutation(indices_prng_key, middle_seq[3:last])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
elif i == from_seq_length // from_block_size - 3:
seq_values = jax.random.permutation(indices_prng_key, middle_seq[:last])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
# Missing -3: should have been sliced till last-3
elif i == from_seq_length // from_block_size - 2:
seq_values = jax.random.permutation(indices_prng_key, middle_seq[:last])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
# Missing -4: should have been sliced till last-4
else:
if start > last:
start = last
seq_values = jax.random.permutation(indices_prng_key, middle_seq[:start])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
elif (end + 1) == last:
seq_values = jax.random.permutation(indices_prng_key, middle_seq[:start])[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
else:
concat_values = jnp.concatenate((middle_seq[:start], middle_seq[end + 1 : last]))
seq_values = jax.random.permutation(indices_prng_key, concat_values)[:r]
rand_attn = rand_attn.at[i - 1].set(seq_values)
return rand_attn
def _bigbird_block_rand_mask_with_head(
self,
from_seq_length,
to_seq_length,
from_block_size,
to_block_size,
num_heads,
plan_from_length,
plan_num_rand_blocks,
indices_prng_key: Optional[jax.random.PRNGKey] = None,
deterministic: Optional[bool] = True,
window_block_left=1,
window_block_right=1,
global_block_top=1,
global_block_bottom=1,
global_block_left=1,
global_block_right=1,
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_heads: int. total number of heads.
plan_from_length: list. plan from length where num_random_blocks are choosen from.
plan_num_rand_blocks: list. number of rand blocks within the plan.
indices_prng_key: jax.random.PRNGKey. PRNG key that is used to perform random jax operations.
deterministic: bool. When False random attention will be used.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_top: int. number of blocks at the top.
global_block_bottom: int. number of blocks at the bottom.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
adjacency list of size num_head where each element is of size from_seq_length//from_block_size-2 by
num_rand_blocks
"""
# using this method when from_seq_length not in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
if from_seq_length not in plan_from_length:
raise ValueError("Error from sequence length not in plan!")
# Total number of blocks in the mmask
num_blocks = from_seq_length // from_block_size
# Number of blocks per plan
plan_block_length = jnp.array(plan_from_length) // from_block_size
# till when to follow plan
max_plan_idx = plan_from_length.index(from_seq_length)
# Random Attention adjacency list
rand_attn = [
jnp.zeros((num_blocks, sum(plan_num_rand_blocks[: max_plan_idx + 1])), dtype=jnp.int32)
for i in range(num_heads)
]
# deterministic
if deterministic:
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
# We will go iteratively over the plan blocks and pick random number of
# Attention blocks from the legally allowed blocks
for plan_idx in range(max_plan_idx + 1):
rnd_r_cnt = 0
if plan_idx > 0:
# set the row for all from_blocks starting from 0 to
# plan_block_length[plan_idx-1]
# column indx start fromm plan_block_length[plan_idx-1] and ends at
# plan_block_length[plan_idx]
if plan_num_rand_blocks[plan_idx] > 0:
rnd_r_cnt = int(sum(plan_num_rand_blocks[:plan_idx]))
curr_r_cnt = int(sum(plan_num_rand_blocks[: plan_idx + 1]))
for blk_rw_idx in range(global_block_top, plan_block_length[plan_idx - 1]):
for h in range(num_heads):
single_block_row_attention = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=plan_block_length[plan_idx - 1],
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
indices_prng_key=indices_prng_key,
)
rand_attn[h] = (
rand_attn[h].at[blk_rw_idx, rnd_r_cnt:curr_r_cnt].set(single_block_row_attention)
)
for pl_id in range(plan_idx):
if plan_num_rand_blocks[pl_id] == 0:
continue
for blk_rw_idx in range(plan_block_length[plan_idx - 1], plan_block_length[plan_idx]):
rnd_r_cnt = 0
to_start_block_id = 0
if pl_id > 0:
rnd_r_cnt = int(sum(plan_num_rand_blocks[:pl_id]))
to_start_block_id = plan_block_length[pl_id - 1]
curr_r_cnt = int(sum(plan_num_rand_blocks[: pl_id + 1]))
for h in range(num_heads):
single_block_row_attention = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[pl_id],
num_rand_blocks=plan_num_rand_blocks[pl_id],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
indices_prng_key=indices_prng_key,
)
rand_attn[h] = (
rand_attn[h].at[blk_rw_idx, rnd_r_cnt:curr_r_cnt].set(single_block_row_attention)
)
if plan_num_rand_blocks[plan_idx] == 0:
continue
curr_r_cnt = int(sum(plan_num_rand_blocks[: plan_idx + 1]))
from_start_block_id = global_block_top
to_start_block_id = 0
if plan_idx > 0:
rnd_r_cnt = int(sum(plan_num_rand_blocks[:plan_idx]))
from_start_block_id = plan_block_length[plan_idx - 1]
to_start_block_id = plan_block_length[plan_idx - 1]
for blk_rw_idx in range(from_start_block_id, plan_block_length[plan_idx]):
for h in range(num_heads):
single_block_row_attention = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
indices_prng_key=indices_prng_key,
)
rand_attn[h] = rand_attn[h].at[blk_rw_idx, rnd_r_cnt:curr_r_cnt].set(single_block_row_attention)
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
@staticmethod
def _get_single_block_row_attention(
block_id,
to_start_block_id,
to_end_block_id,
num_rand_blocks,
indices_prng_key: Optional[jax.random.PRNGKey] = None,
window_block_left=1,
window_block_right=1,
global_block_left=1,
global_block_right=1,
):
"""
For a single row block get random row attention.
Args:
block_id: int. block id of row.
to_start_block_id: int. random attention column start id.
to_end_block_id: int. random attention column end id.
num_rand_blocks: int. number of random blocks to be selected.
indices_prng_key: jax.random.PRNGKey. PRNG key that is used to perform random jax operations
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
row containing the random attention vector of size num_rand_blocks.
"""
# list of to_blocks from which to choose random attention
to_block_list = jnp.arange(to_start_block_id, to_end_block_id, dtype=jnp.int32)
# permute the blocks
perm_block = jax.random.permutation(indices_prng_key, to_block_list)
# illegal blocks for the current block id, using window
illegal_blocks = list(range(block_id - window_block_left, block_id + window_block_right + 1))
# Add blocks at the start and at the end
illegal_blocks.extend(list(range(global_block_left)))
illegal_blocks.extend(list(range(to_end_block_id - global_block_right, to_end_block_id)))
# The second from_block cannot choose random attention on second last to_block
if block_id == 1:
illegal_blocks.append(to_end_block_id - 2)
# The second last from_block cannot choose random attention on second to_block
if block_id == to_end_block_id - 2:
illegal_blocks.append(1)
selected_random_blocks = []
for i in range(to_end_block_id - to_start_block_id):
if perm_block[i] not in illegal_blocks:
selected_random_blocks.append(perm_block[i])
if len(selected_random_blocks) == num_rand_blocks:
break
return jnp.array(selected_random_blocks, dtype=jnp.int32)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertSelfOutput with Bert->BigBird
class FlaxBigBirdSelfOutput(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, hidden_states, input_tensor, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class FlaxBigBirdAttention(nn.Module):
config: BigBirdConfig
layer_id: int = None
causal: bool = False
dtype: jnp.dtype = jnp.float32
def setup(self):
if self.config.attention_type == "original_full":
self.self = FlaxBigBirdSelfAttention(self.config, causal=self.causal, dtype=self.dtype)
elif self.config.attention_type == "block_sparse":
self.self = FlaxBigBirdBlockSparseAttention(self.config, block_sparse_seed=self.layer_id, dtype=self.dtype)
else:
raise ValueError(
f"Your `config.attention_type` is {self.config.attention_type} but it can either be `original_full` or"
" `block_sparse`"
)
self.output = FlaxBigBirdSelfOutput(self.config, dtype=self.dtype)
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
key_value_states=None,
init_cache=False,
deterministic=True,
output_attentions: bool = False,
):
# Attention mask comes in as attention_mask.shape == (*batch_sizes, kv_length)
# FLAX expects: attention_mask.shape == (*batch_sizes, 1, 1, kv_length) such that it is broadcastable
# with attn_weights.shape == (*batch_sizes, num_heads, q_length, kv_length)
if self.config.attention_type == "original_full":
attn_outputs = self.self(
hidden_states,
attention_mask,
layer_head_mask=layer_head_mask,
key_value_states=key_value_states,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
)
else:
attn_outputs = self.self(
hidden_states,
attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
)
attn_output = attn_outputs[0]
hidden_states = self.output(attn_output, hidden_states, deterministic=deterministic)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_outputs[1],)
return outputs
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertIntermediate with Bert->BigBird
class FlaxBigBirdIntermediate(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.intermediate_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.activation = ACT2FN[self.config.hidden_act]
def __call__(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertOutput with Bert->BigBird
class FlaxBigBirdOutput(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(self, hidden_states, attention_output, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states + attention_output)
return hidden_states
class FlaxBigBirdLayer(nn.Module):
config: BigBirdConfig
layer_id: int = None
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.attention = FlaxBigBirdAttention(
self.config, layer_id=self.layer_id, causal=self.config.is_decoder, dtype=self.dtype
)
self.intermediate = FlaxBigBirdIntermediate(self.config, dtype=self.dtype)
self.output = FlaxBigBirdOutput(self.config, dtype=self.dtype)
if self.config.add_cross_attention:
self.crossattention = FlaxBigBirdAttention(self.config, causal=False, dtype=self.dtype)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLayer.__call__ with Bert->BigBird
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
):
# Self Attention
attention_outputs = self.attention(
hidden_states,
attention_mask,
layer_head_mask=layer_head_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
)
attention_output = attention_outputs[0]
# Cross-Attention Block
if encoder_hidden_states is not None:
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask=encoder_attention_mask,
layer_head_mask=layer_head_mask,
key_value_states=encoder_hidden_states,
deterministic=deterministic,
output_attentions=output_attentions,
)
attention_output = cross_attention_outputs[0]
hidden_states = self.intermediate(attention_output)
hidden_states = self.output(hidden_states, attention_output, deterministic=deterministic)
outputs = (hidden_states,)
if output_attentions:
outputs += (attention_outputs[1],)
if encoder_hidden_states is not None:
outputs += (cross_attention_outputs[1],)
return outputs
class FlaxBigBirdLayerCollection(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
if self.gradient_checkpointing:
FlaxBigBirdCheckpointLayer = remat(FlaxBigBirdLayer, static_argnums=(5, 6, 7))
self.layers = [
FlaxBigBirdCheckpointLayer(self.config, layer_id=i, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
else:
self.layers = [
FlaxBigBirdLayer(self.config, layer_id=i, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLayerCollection.__call__ with Bert->BigBird
def __call__(
self,
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
# Check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.shape[0] != (len(self.layers)):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for "
f" {head_mask.shape[0]}."
)
for i, layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
layer_outputs = layer(
hidden_states,
attention_mask,
head_mask[i] if head_mask is not None else None,
encoder_hidden_states,
encoder_attention_mask,
init_cache,
deterministic,
output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = (hidden_states, all_hidden_states, all_attentions, all_cross_attentions)
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertEncoder with Bert->BigBird
class FlaxBigBirdEncoder(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.layer = FlaxBigBirdLayerCollection(
self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
def __call__(
self,
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.layer(
hidden_states,
attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPredictionHeadTransform with Bert->BigBird
class FlaxBigBirdPredictionHeadTransform(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dense = nn.Dense(self.config.hidden_size, dtype=self.dtype)
self.activation = ACT2FN[self.config.hidden_act]
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
return self.LayerNorm(hidden_states)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLMPredictionHead with Bert->BigBird, np.ndarray->jnp.ndarray
class FlaxBigBirdLMPredictionHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
bias_init: Callable[..., jnp.ndarray] = jax.nn.initializers.zeros
def setup(self):
self.transform = FlaxBigBirdPredictionHeadTransform(self.config, dtype=self.dtype)
self.decoder = nn.Dense(self.config.vocab_size, dtype=self.dtype, use_bias=False)
self.bias = self.param("bias", self.bias_init, (self.config.vocab_size,))
def __call__(self, hidden_states, shared_embedding=None):
hidden_states = self.transform(hidden_states)
if shared_embedding is not None:
hidden_states = self.decoder.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
hidden_states = self.decoder(hidden_states)
bias = jnp.asarray(self.bias, self.dtype)
hidden_states += bias
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertOnlyMLMHead with Bert->BigBird
class FlaxBigBirdOnlyMLMHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.predictions = FlaxBigBirdLMPredictionHead(self.config, dtype=self.dtype)
def __call__(self, hidden_states, shared_embedding=None):
hidden_states = self.predictions(hidden_states, shared_embedding=shared_embedding)
return hidden_states
class FlaxBigBirdPreTrainingHeads(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.predictions = FlaxBigBirdLMPredictionHead(self.config, dtype=self.dtype)
self.seq_relationship = nn.Dense(2, dtype=self.dtype)
def __call__(self, hidden_states, pooled_output, shared_embedding=None):
prediction_scores = self.predictions(hidden_states, shared_embedding=shared_embedding)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class FlaxBigBirdPreTrainedModel(FlaxPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BigBirdConfig
base_model_prefix = "bert"
module_class: nn.Module = None
def __init__(
self,
config: BigBirdConfig,
input_shape: Optional[tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
gradient_checkpointing: bool = False,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, gradient_checkpointing=gradient_checkpointing, **kwargs)
if config.attention_type == "block_sparse" and input_shape is None:
input_shape = (1, 12 * config.block_size)
elif input_shape is None:
input_shape = (1, 1)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPreTrainedModel.enable_gradient_checkpointing
def enable_gradient_checkpointing(self):
self._module = self.module_class(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=True,
)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
token_type_ids = jnp.zeros_like(input_ids)
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_shape)
attention_mask = jnp.ones_like(input_ids)
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
params_rng, dropout_rng, indices_rng = jax.random.split(rng, num=3)
rngs = {"params": params_rng, "dropout": dropout_rng, "indices": indices_rng}
if self.config.add_cross_attention:
encoder_hidden_states = jnp.zeros(input_shape + (self.config.hidden_size,))
encoder_attention_mask = attention_mask
module_init_outputs = self.module.init(
rngs,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
return_dict=False,
)
else:
module_init_outputs = self.module.init(
rngs,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
return_dict=False,
)
random_params = module_init_outputs["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartDecoderPreTrainedModel.init_cache
def init_cache(self, batch_size, max_length):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
"""
# init input variables to retrieve cache
input_ids = jnp.ones((batch_size, max_length), dtype="i4")
attention_mask = jnp.ones_like(input_ids, dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
init_variables = self.module.init(
jax.random.PRNGKey(0), input_ids, attention_mask, position_ids, return_dict=False, init_cache=True
)
return unfreeze(init_variables["cache"])
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def __call__(
self,
input_ids,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
params: dict = None,
dropout_rng: Optional[jax.random.PRNGKey] = None,
indices_rng: Optional[jax.random.PRNGKey] = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
past_key_values: dict = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
# init input tensors if not passed
if token_type_ids is None:
token_type_ids = jnp.zeros_like(input_ids)
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if head_mask is None:
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
# Handle any PRNG if needed
rngs = {}
if indices_rng is not None:
rngs["indices"] = indices_rng
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
if self.config.add_cross_attention:
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be passed
# down to ensure cache is used. It has to be made sure that cache is marked as mutable so that it can be
# changed by FlaxBigBirdAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
outputs = self.module.apply(
inputs,
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids=jnp.array(token_type_ids, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
head_mask=jnp.array(head_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
deterministic=not train,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
rngs=rngs,
mutable=mutable,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past_key_values = outputs
outputs["past_key_values"] = unfreeze(past_key_values["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past_key_values = outputs
outputs = outputs[:1] + (unfreeze(past_key_values["cache"]),) + outputs[1:]
else:
outputs = self.module.apply(
inputs,
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids=jnp.array(token_type_ids, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
head_mask=jnp.array(head_mask, dtype="i4"),
deterministic=not train,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
rngs=rngs,
)
return outputs
class FlaxBigBirdModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
add_pooling_layer: bool = True
gradient_checkpointing: bool = False
def setup(self):
self.embeddings = FlaxBigBirdEmbeddings(self.config, dtype=self.dtype)
self.encoder = FlaxBigBirdEncoder(
self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.pooler = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
hidden_states = self.embeddings(
input_ids, token_type_ids, position_ids, attention_mask, deterministic=deterministic
)
outputs = self.encoder(
hidden_states,
attention_mask,
head_mask=head_mask,
deterministic=deterministic,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
pooled = nn.tanh(self.pooler(hidden_states[:, 0, :])) if self.add_pooling_layer else None
if not return_dict:
# if pooled is None, don't return it
if pooled is None:
return (hidden_states,) + outputs[1:]
return (hidden_states, pooled) + outputs[1:]
return FlaxBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=hidden_states,
pooler_output=pooled,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
@add_start_docstrings(
"The bare BigBird Model transformer outputting raw hidden-states without any specific head on top.",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertModel with Bert->BigBird
class FlaxBigBirdModel(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdModule
append_call_sample_docstring(FlaxBigBirdModel, _CHECKPOINT_FOR_DOC, FlaxBaseModelOutputWithPooling, _CONFIG_FOR_DOC)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForPreTrainingModule with Bert->BigBird
class FlaxBigBirdForPreTrainingModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdPreTrainingHeads(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
hidden_states = outputs[0]
pooled_output = outputs[1]
prediction_scores, seq_relationship_score = self.cls(
hidden_states, pooled_output, shared_embedding=shared_embedding
)
if not return_dict:
return (prediction_scores, seq_relationship_score) + outputs[2:]
return FlaxBigBirdForPreTrainingOutput(
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with two heads on top as done during the pretraining: a `masked language modeling` head and a `next
sentence prediction (classification)` head.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForPreTraining with Bert->BigBird
class FlaxBigBirdForPreTraining(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForPreTrainingModule
FLAX_BIG_BIRD_FOR_PRETRAINING_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxBigBirdForPreTraining
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = FlaxBigBirdForPreTraining.from_pretrained("google/bigbird-roberta-base")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="np")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```
"""
overwrite_call_docstring(
FlaxBigBirdForPreTraining,
BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length") + FLAX_BIG_BIRD_FOR_PRETRAINING_DOCSTRING,
)
append_replace_return_docstrings(
FlaxBigBirdForPreTraining, output_type=FlaxBigBirdForPreTrainingOutput, config_class=_CONFIG_FOR_DOC
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMaskedLMModule with Bert->BigBird
class FlaxBigBirdForMaskedLMModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
add_pooling_layer=False,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdOnlyMLMHead(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
# Compute the prediction scores
logits = self.cls(hidden_states, shared_embedding=shared_embedding)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxMaskedLMOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""BigBird Model with a `language modeling` head on top.""", BIG_BIRD_START_DOCSTRING)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMaskedLM with Bert->BigBird
class FlaxBigBirdForMaskedLM(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForMaskedLMModule
append_call_sample_docstring(FlaxBigBirdForMaskedLM, _CHECKPOINT_FOR_DOC, FlaxMaskedLMOutput, _CONFIG_FOR_DOC)
class FlaxBigBirdClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dense = nn.Dense(self.config.hidden_size, dtype=self.dtype)
classifier_dropout = (
self.config.classifier_dropout
if self.config.classifier_dropout is not None
else self.config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.out_proj = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(self, features, deterministic=True):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, deterministic=deterministic)
x = self.dense(x)
x = ACT2FN[self.config.hidden_act](x)
x = self.dropout(x, deterministic=deterministic)
x = self.out_proj(x)
return x
class FlaxBigBirdForSequenceClassificationModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.classifier = FlaxBigBirdClassificationHead(self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output, deterministic=deterministic)
if not return_dict:
return (logits,) + outputs[2:]
return FlaxSequenceClassifierOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForSequenceClassification with Bert->BigBird
class FlaxBigBirdForSequenceClassification(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForSequenceClassificationModule
append_call_sample_docstring(
FlaxBigBirdForSequenceClassification,
_CHECKPOINT_FOR_DOC,
FlaxSequenceClassifierOutput,
_CONFIG_FOR_DOC,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMultipleChoiceModule with Bert->BigBird
class FlaxBigBirdForMultipleChoiceModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.classifier = nn.Dense(1, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
num_choices = input_ids.shape[1]
input_ids = input_ids.reshape(-1, input_ids.shape[-1]) if input_ids is not None else None
attention_mask = attention_mask.reshape(-1, attention_mask.shape[-1]) if attention_mask is not None else None
token_type_ids = token_type_ids.reshape(-1, token_type_ids.shape[-1]) if token_type_ids is not None else None
position_ids = position_ids.reshape(-1, position_ids.shape[-1]) if position_ids is not None else None
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, deterministic=deterministic)
logits = self.classifier(pooled_output)
reshaped_logits = logits.reshape(-1, num_choices)
if not return_dict:
return (reshaped_logits,) + outputs[2:]
return FlaxMultipleChoiceModelOutput(
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class FlaxBigBirdForMultipleChoice(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForMultipleChoiceModule
def __init__(
self,
config: BigBirdConfig,
input_shape: Optional[tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
if config.attention_type == "block_sparse" and input_shape is None:
input_shape = (1, 1, 12 * config.block_size)
elif input_shape is None:
input_shape = (1, 1)
super().__init__(config, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
overwrite_call_docstring(
FlaxBigBirdForMultipleChoice, BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
append_call_sample_docstring(
FlaxBigBirdForMultipleChoice,
_CHECKPOINT_FOR_DOC,
FlaxMultipleChoiceModelOutput,
_CONFIG_FOR_DOC,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForTokenClassificationModule with Bert->BigBird
class FlaxBigBirdForTokenClassificationModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
add_pooling_layer=False,
gradient_checkpointing=self.gradient_checkpointing,
)
classifier_dropout = (
self.config.classifier_dropout
if self.config.classifier_dropout is not None
else self.config.hidden_dropout_prob
)
self.dropout = nn.Dropout(rate=classifier_dropout)
self.classifier = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
logits = self.classifier(hidden_states)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxTokenClassifierOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForTokenClassification with Bert->BigBird
class FlaxBigBirdForTokenClassification(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForTokenClassificationModule
append_call_sample_docstring(
FlaxBigBirdForTokenClassification,
_CHECKPOINT_FOR_DOC,
FlaxTokenClassifierOutput,
_CONFIG_FOR_DOC,
)
class FlaxBigBirdForQuestionAnsweringHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.intermediate = FlaxBigBirdIntermediate(self.config, dtype=self.dtype)
self.output = FlaxBigBirdOutput(self.config, dtype=self.dtype)
self.qa_outputs = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(self, encoder_output, deterministic=True):
hidden_states = self.dropout(encoder_output, deterministic=deterministic)
hidden_states = self.intermediate(hidden_states)
hidden_states = self.output(hidden_states, encoder_output)
hidden_states = self.qa_outputs(hidden_states)
return hidden_states
class FlaxBigBirdForQuestionAnsweringModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
add_pooling_layer: bool = False
gradient_checkpointing: bool = False
def setup(self):
self.config.num_labels = 2
self.bert = FlaxBigBirdModule(
self.config,
dtype=self.dtype,
add_pooling_layer=self.add_pooling_layer,
gradient_checkpointing=self.gradient_checkpointing,
)
self.qa_classifier = FlaxBigBirdForQuestionAnsweringHead(self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
logits_mask=None,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
pooled_output = outputs[1] if self.add_pooling_layer else None
logits = self.qa_classifier(hidden_states, deterministic=deterministic)
if logits_mask is not None:
# removing question tokens from the competition
logits = logits - logits_mask * 1e6
start_logits, end_logits = logits.split(self.config.num_labels, axis=-1)
start_logits = start_logits.squeeze(-1)
end_logits = end_logits.squeeze(-1)
if not return_dict:
return (start_logits, end_logits) + outputs[1:]
return FlaxBigBirdForQuestionAnsweringModelOutput(
start_logits=start_logits,
end_logits=end_logits,
pooled_output=pooled_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BIG_BIRD_START_DOCSTRING,
)
class FlaxBigBirdForQuestionAnswering(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForQuestionAnsweringModule
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def __call__(
self,
input_ids,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
question_lengths=None,
params: dict = None,
dropout_rng: Optional[jax.random.PRNGKey] = None,
indices_rng: Optional[jax.random.PRNGKey] = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if head_mask is None:
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
if question_lengths is None and input_ids is not None:
# assuming input_ids format: <cls> <question> <sep> context <sep>
question_lengths = jnp.argmax((input_ids == self.config.sep_token_id).astype("i4"), axis=-1) + 1
question_lengths = jnp.expand_dims(question_lengths, axis=1)
seqlen = input_ids.shape[1]
logits_mask = None
if question_lengths is not None:
# setting lengths logits to `-inf`
logits_mask = self.prepare_question_mask(question_lengths, seqlen)
if token_type_ids is None:
token_type_ids = (~logits_mask).astype("i4")
logits_mask = jnp.expand_dims(logits_mask, axis=2)
logits_mask = logits_mask.at[:, 0].set(False)
# init input tensors if not passed
if token_type_ids is None:
token_type_ids = jnp.zeros_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
if indices_rng is not None:
rngs["indices"] = indices_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids,
jnp.array(position_ids, dtype="i4"),
jnp.array(head_mask, dtype="i4"),
logits_mask,
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
@staticmethod
def prepare_question_mask(q_lengths, maxlen: int):
# q_lengths -> (bz, 1)
mask = jnp.arange(0, maxlen)
mask = jnp.expand_dims(mask, axis=0) < q_lengths
return mask
append_call_sample_docstring(
FlaxBigBirdForQuestionAnswering,
_CHECKPOINT_FOR_DOC,
FlaxBigBirdForQuestionAnsweringModelOutput,
_CONFIG_FOR_DOC,
)
class FlaxBigBirdForCausalLMModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
add_pooling_layer=False,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdOnlyMLMHead(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
token_type_ids: Optional[jnp.ndarray] = None,
head_mask: Optional[jnp.ndarray] = None,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
# Compute the prediction scores
logits = self.cls(hidden_states, shared_embedding=shared_embedding)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxCausalLMOutputWithCrossAttentions(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
@add_start_docstrings(
"""
BigBird Model with a language modeling head on top (a linear layer on top of the hidden-states output) e.g for
autoregressive tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForCausalLM with Bert->BigBird
class FlaxBigBirdForCausalLM(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForCausalLMModule
def prepare_inputs_for_generation(self, input_ids, max_length, attention_mask: Optional[jax.Array] = None):
# initializing the cache
batch_size, seq_length = input_ids.shape
past_key_values = self.init_cache(batch_size, max_length)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyway.
# Thus, we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if attention_mask is not None:
position_ids = attention_mask.cumsum(axis=-1) - 1
extended_attention_mask = lax.dynamic_update_slice(extended_attention_mask, attention_mask, (0, 0))
else:
position_ids = jnp.broadcast_to(jnp.arange(seq_length, dtype="i4")[None, :], (batch_size, seq_length))
return {
"past_key_values": past_key_values,
"attention_mask": extended_attention_mask,
"position_ids": position_ids,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
model_kwargs["position_ids"] = model_kwargs["position_ids"][:, -1:] + 1
return model_kwargs
append_call_sample_docstring(
FlaxBigBirdForCausalLM,
_CHECKPOINT_FOR_DOC,
FlaxCausalLMOutputWithCrossAttentions,
_CONFIG_FOR_DOC,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/big_bird/modeling_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch BigBird model."""
import math
import os
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
CausalLMOutputWithCrossAttentions,
MaskedLMOutput,
MultipleChoiceModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_big_bird import BigBirdConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/bigbird-roberta-base"
_CONFIG_FOR_DOC = "BigBirdConfig"
BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/bigbird-roberta-base",
"google/bigbird-roberta-large",
"google/bigbird-base-trivia-itc",
# See all BigBird models at https://huggingface.co/models?filter=big_bird
]
_TRIVIA_QA_MAPPING = {
"big_bird_attention": "attention/self",
"output_layer_norm": "output/LayerNorm",
"attention_output": "attention/output/dense",
"output": "output/dense",
"self_attention_layer_norm": "attention/output/LayerNorm",
"intermediate": "intermediate/dense",
"word_embeddings": "bert/embeddings/word_embeddings",
"position_embedding": "bert/embeddings/position_embeddings",
"type_embeddings": "bert/embeddings/token_type_embeddings",
"embeddings": "bert/embeddings",
"layer_normalization": "output/LayerNorm",
"layer_norm": "LayerNorm",
"trivia_qa_head": "qa_classifier",
"dense": "intermediate/dense",
"dense_1": "qa_outputs",
}
def load_tf_weights_in_big_bird(model, tf_checkpoint_path, is_trivia_qa=False):
"""Load tf checkpoints in a pytorch model."""
def load_tf_weights_bert(init_vars, tf_path):
names = []
tf_weights = {}
for name, shape in init_vars:
array = tf.train.load_variable(tf_path, name)
name = name.replace("bert/encoder/LayerNorm", "bert/embeddings/LayerNorm")
logger.info(f"Loading TF weight {name} with shape {shape}")
names.append(name)
tf_weights[name] = array
return names, tf_weights
def load_tf_weights_trivia_qa(init_vars):
names = []
tf_weights = {}
for i, var in enumerate(init_vars):
name_items = var.name.split("/")
if "transformer_scaffold" in name_items[0]:
layer_name_items = name_items[0].split("_")
if len(layer_name_items) < 3:
layer_name_items += [0]
name_items[0] = f"bert/encoder/layer_{layer_name_items[2]}"
name = "/".join([_TRIVIA_QA_MAPPING[x] if x in _TRIVIA_QA_MAPPING else x for x in name_items])[
:-2
] # remove last :0 in variable
if "self/attention/output" in name:
name = name.replace("self/attention/output", "output")
if i >= len(init_vars) - 2:
name = name.replace("intermediate", "output")
logger.info(f"Loading TF weight {name} with shape {var.shape}")
array = var.value().numpy()
names.append(name)
tf_weights[name] = array
return names, tf_weights
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.saved_model.load(tf_path).variables if is_trivia_qa else tf.train.list_variables(tf_path)
if len(init_vars) <= 0:
raise ValueError("Loaded trained variables cannot be empty.")
pt_names = list(model.state_dict().keys())
if is_trivia_qa:
names, tf_weights = load_tf_weights_trivia_qa(init_vars)
else:
names, tf_weights = load_tf_weights_bert(init_vars, tf_path)
for txt_name in names:
array = tf_weights[txt_name]
name = txt_name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
pt_name = []
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
pt_name.append("bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
pt_name.append("classifier")
elif scope_names[0] == "transform":
pointer = getattr(pointer, "transform")
pt_name.append("transform")
if ("bias" in name) or ("kernel" in name):
pointer = getattr(pointer, "dense")
pt_name.append("dense")
elif ("beta" in name) or ("gamma" in name):
pointer = getattr(pointer, "LayerNorm")
pt_name.append("LayerNorm")
else:
try:
pointer = getattr(pointer, scope_names[0])
pt_name.append(f"{scope_names[0]}")
except AttributeError:
logger.info(f"Skipping {m_name}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
pt_name.append(f"{num}")
if m_name[-11:] == "_embeddings" or m_name == "embeddings":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
if len(array.shape) > len(pointer.shape) and math.prod(array.shape) == math.prod(pointer.shape):
# print(txt_name, array.shape)
if (
txt_name.endswith("attention/self/key/kernel")
or txt_name.endswith("attention/self/query/kernel")
or txt_name.endswith("attention/self/value/kernel")
):
array = array.transpose(1, 0, 2).reshape(pointer.shape)
elif txt_name.endswith("attention/output/dense/kernel"):
array = array.transpose(0, 2, 1).reshape(pointer.shape)
else:
array = array.reshape(pointer.shape)
if pointer.shape != array.shape:
raise ValueError(
f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched of {txt_name}."
)
except ValueError as e:
e.args += (pointer.shape, array.shape)
raise
pt_weight_name = ".".join(pt_name)
logger.info(f"Initialize PyTorch weight {pt_weight_name} from {txt_name}.")
pointer.data = torch.from_numpy(array)
tf_weights.pop(txt_name, None)
pt_names.remove(pt_weight_name)
logger.info(f"Weights not copied to PyTorch model: {', '.join(tf_weights.keys())}.")
logger.info(f"Weights not initialized in PyTorch model: {', '.join(pt_names)}.")
return model
class BigBirdEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings.__init__
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
# End copy
self.rescale_embeddings = config.rescale_embeddings
self.hidden_size = config.hidden_size
def forward(
self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
if self.rescale_embeddings:
inputs_embeds = inputs_embeds * (self.hidden_size**0.5)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.dropout(embeddings)
embeddings = self.LayerNorm(embeddings)
return embeddings
class BigBirdSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BigBirdModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class BigBirdBlockSparseAttention(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.max_seqlen = config.max_position_embeddings
self.seed = seed
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size {config.hidden_size} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.num_random_blocks = config.num_random_blocks
self.block_size = config.block_size
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
band_mask=None,
from_mask=None,
to_mask=None,
from_blocked_mask=None,
to_blocked_mask=None,
output_attentions=None,
):
# Currently this `class` can't be used in decoder.
batch_size, seqlen, _ = hidden_states.size()
to_seq_length = from_seq_length = seqlen
from_block_size = to_block_size = self.block_size
if from_seq_length % from_block_size != 0:
raise ValueError("Query sided sequence length must be multiple of block size")
if to_seq_length % to_block_size != 0:
raise ValueError("Key/Value sided sequence length must be multiple of block size")
query_layer = self.transpose_for_scores(self.query(hidden_states))
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
context_layer, attention_probs = self.bigbird_block_sparse_attention(
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
self.num_attention_heads,
self.num_random_blocks,
self.attention_head_size,
from_block_size,
to_block_size,
batch_size,
from_seq_length,
to_seq_length,
seed=self.seed,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=output_attentions,
)
context_layer = context_layer.contiguous().view(batch_size, from_seq_length, -1)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
@staticmethod
def torch_bmm_nd(inp_1, inp_2, ndim=None):
"""Fast nd matrix multiplication"""
# faster replacement of torch.einsum ("bhqk,bhkd->bhqd")
return torch.bmm(inp_1.reshape((-1,) + inp_1.shape[-2:]), inp_2.reshape((-1,) + inp_2.shape[-2:])).view(
inp_1.shape[: ndim - 2] + (inp_1.shape[ndim - 2], inp_2.shape[ndim - 1])
)
@staticmethod
def torch_bmm_nd_transpose(inp_1, inp_2, ndim=None):
"""Fast nd matrix multiplication with transpose"""
# faster replacement of torch.einsum (bhqd,bhkd->bhqk)
return torch.bmm(
inp_1.reshape((-1,) + inp_1.shape[-2:]), inp_2.reshape((-1,) + inp_2.shape[-2:]).transpose(1, 2)
).view(inp_1.shape[: ndim - 2] + (inp_1.shape[ndim - 2], inp_2.shape[ndim - 2]))
def bigbird_block_sparse_attention(
self,
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
n_heads,
n_rand_blocks,
attention_head_size,
from_block_size,
to_block_size,
batch_size,
from_seq_len,
to_seq_len,
seed,
plan_from_length,
plan_num_rand_blocks,
output_attentions,
):
# BigBird block-sparse attention as suggested in paper
# ITC:
# global tokens: 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# ETC:
# global tokens: extra_globals_tokens + 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# Note:
# 1) Currently, ETC is not supported.
# 2) Window size is fixed to 3 blocks & it can be changed only by
# changing `block_size`.
# 3) Number of global blocks are fixed (2 blocks here) & global tokens can be
# controlled only by `block_size`.
# attention is calculated separately for q[0], q[1], q[2:-2], q[-2], q[-1] in order to use special trick of shifting tokens (for calculating sliding attention)
# hence following code can be divided into 5 parts.
if from_seq_len // from_block_size != to_seq_len // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rsqrt_d = 1 / math.sqrt(attention_head_size)
bsz = batch_size
attn_mask_penalty = -10000.0
# generate random attention and corresponding masks
np.random.seed(seed)
if from_seq_len in [1024, 3072, 4096]: # old plans used in paper
rand_attn = [
self._bigbird_block_rand_mask(
self.max_seqlen, self.max_seqlen, from_block_size, to_block_size, n_rand_blocks, last_idx=1024
)[: (from_seq_len // from_block_size - 2)]
for _ in range(n_heads)
]
else:
if plan_from_length is None:
plan_from_length, plan_num_rand_blocks = self._get_rand_attn_plan(
from_seq_len, from_block_size, n_rand_blocks
)
rand_attn = self._bigbird_block_rand_mask_with_head(
from_seq_length=from_seq_len,
to_seq_length=to_seq_len,
from_block_size=from_block_size,
to_block_size=to_block_size,
num_heads=n_heads,
plan_from_length=plan_from_length,
plan_num_rand_blocks=plan_num_rand_blocks,
)
rand_attn = np.stack(rand_attn, axis=0)
rand_attn = torch.tensor(rand_attn, device=query_layer.device, dtype=torch.long)
rand_attn.unsqueeze_(0)
rand_attn = torch.cat([rand_attn for _ in range(batch_size)], dim=0)
rand_mask = self._create_rand_mask_from_inputs(
from_blocked_mask, to_blocked_mask, rand_attn, n_heads, n_rand_blocks, bsz, from_seq_len, from_block_size
)
blocked_query_matrix = query_layer.view(bsz, n_heads, from_seq_len // from_block_size, from_block_size, -1)
blocked_key_matrix = key_layer.view(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
blocked_value_matrix = value_layer.view(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
# preparing block for randn attn
gathered_key = self.torch_gather_b2(blocked_key_matrix, rand_attn)
gathered_key = gathered_key.view(
bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1
) # [bsz, n_heads, to_seq_len//to_block_size-2, n_rand_blocks, to_block_size, -1]
gathered_value = self.torch_gather_b2(blocked_value_matrix, rand_attn)
gathered_value = gathered_value.view(
bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1
) # [bsz, n_heads, to_seq_len//to_block_size-2, n_rand_blocks, to_block_size, -1]
# 1st PART
# 1st block (global block) attention scores
# q[0] x (k[0], k[1], k[2], k[3], k[4] .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
first_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, 0], key_layer, ndim=4)
first_product = first_product * rsqrt_d
first_product += (1.0 - to_mask) * attn_mask_penalty
first_attn_weights = nn.functional.softmax(
first_product, dim=-1
) # [bsz, n_heads, from_block_size, to_seq_len]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
first_context_layer = self.torch_bmm_nd(first_attn_weights, value_layer, ndim=4)
first_context_layer.unsqueeze_(2)
# 2nd PART
# 2nd block attention scores
# q[1] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> 2nd, 3rd blocks
# global key blocks -> 1st block
second_key_mat = torch.cat(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, 1],
blocked_key_matrix[:, :, 2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, 0],
],
dim=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
second_value_mat = torch.cat(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, 1],
blocked_value_matrix[:, :, 2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, 0],
],
dim=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, 1], second_key_mat, ndim=4)
second_seq_pad = torch.cat(
[
to_mask[:, :, :, : 3 * to_block_size],
to_mask[:, :, :, -to_block_size:],
to_mask.new_ones([bsz, 1, 1, n_rand_blocks * to_block_size]),
],
dim=3,
)
second_rand_pad = torch.cat(
[
rand_mask.new_ones([bsz, n_heads, from_block_size, 4 * to_block_size]),
rand_mask[:, :, 0],
],
dim=3,
)
second_product = second_product * rsqrt_d
second_product += (1.0 - torch.minimum(second_seq_pad, second_rand_pad)) * attn_mask_penalty
second_attn_weights = nn.functional.softmax(
second_product, dim=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, -1]
second_context_layer = self.torch_bmm_nd(second_attn_weights, second_value_mat, ndim=4)
second_context_layer.unsqueeze_(2)
# 3rd PART
# Middle blocks attention scores
# q[-2:2] x (sliding_keys, random_keys, global_keys)
# sliding attn is calculated using special trick of shifting tokens as discussed in paper
# random keys are generated by taking random indices as per `rand_attn`
# global keys -> 1st & last block
exp_blocked_key_matrix = torch.cat(
[blocked_key_matrix[:, :, 1:-3], blocked_key_matrix[:, :, 2:-2], blocked_key_matrix[:, :, 3:-1]], dim=3
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
exp_blocked_value_matrix = torch.cat(
[blocked_value_matrix[:, :, 1:-3], blocked_value_matrix[:, :, 2:-2], blocked_value_matrix[:, :, 3:-1]],
dim=3,
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
middle_query_matrix = blocked_query_matrix[:, :, 2:-2]
# sliding attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [b, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
inner_band_product = self.torch_bmm_nd_transpose(middle_query_matrix, exp_blocked_key_matrix, ndim=5)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, 3*to_block_size]
inner_band_product = inner_band_product * rsqrt_d
# randn attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
rand_band_product = self.torch_bmm_nd_transpose(middle_query_matrix, gathered_key[:, :, 1:-1], ndim=5)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
rand_band_product = rand_band_product * rsqrt_d
# Including 1st block (since it's global)
first_band_product = torch.einsum(
"bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, 0]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
first_band_product = first_band_product * rsqrt_d
# Including last block (since it's global)
last_band_product = torch.einsum(
"bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, -1]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
last_band_product = last_band_product * rsqrt_d
# masking padded tokens
inner_band_product += (1.0 - band_mask) * attn_mask_penalty
first_band_product += (1.0 - to_mask[:, :, :, :to_block_size].unsqueeze(3)) * attn_mask_penalty
last_band_product += (1.0 - to_mask[:, :, :, -to_block_size:].unsqueeze(3)) * attn_mask_penalty
rand_band_product += (1.0 - rand_mask[:, :, 1:-1]) * attn_mask_penalty
# completing attention scores matrix for all q[-2:2]
band_product = torch.cat(
[first_band_product, inner_band_product, rand_band_product, last_band_product], dim=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# safely doing softmax since attention matrix is completed
attn_weights = nn.functional.softmax(
band_product, dim=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# contribution of sliding keys
# [bsz, n_heads, m//from_block_size-4, from_block_size, 3*to_block_size] x [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
context_layer = self.torch_bmm_nd(
attn_weights[:, :, :, :, to_block_size : 4 * to_block_size], exp_blocked_value_matrix, ndim=5
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of random keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size] x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
context_layer += self.torch_bmm_nd(
attn_weights[:, :, :, :, 4 * to_block_size : -to_block_size], gathered_value[:, :, 1:-1], ndim=5
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of global keys
context_layer += torch.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, :to_block_size], blocked_value_matrix[:, :, 0]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += torch.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, -to_block_size:], blocked_value_matrix[:, :, -1]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# 4th PART
# last 2nd token attention scores
# q[-2] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> last 3 blocks
# global key block -> 1st block
# random key block -> based on indices stored in `randn_attn`
second_last_key_mat = torch.cat(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, -3],
blocked_key_matrix[:, :, -2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, -1],
],
dim=2,
) # [bsz, n_heads, (4+n_random_blocks)*to_block_size, -1]
second_last_value_mat = torch.cat(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, -3],
blocked_value_matrix[:, :, -2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, -1],
],
dim=2,
) # [bsz, n_heads, (4+r)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_last_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, -2], second_last_key_mat, ndim=4)
second_last_seq_pad = torch.cat(
[
to_mask[:, :, :, :to_block_size],
to_mask[:, :, :, -3 * to_block_size :],
to_mask.new_ones([bsz, 1, 1, n_rand_blocks * to_block_size]),
],
dim=3,
)
second_last_rand_pad = torch.cat(
[
rand_mask.new_ones([bsz, n_heads, from_block_size, 4 * to_block_size]),
rand_mask[:, :, -1],
],
dim=3,
)
second_last_product = second_last_product * rsqrt_d
second_last_product += (1.0 - torch.minimum(second_last_seq_pad, second_last_rand_pad)) * attn_mask_penalty
second_last_attn_weights = nn.functional.softmax(
second_last_product, dim=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, -1]
second_last_context_layer = self.torch_bmm_nd(second_last_attn_weights, second_last_value_mat, ndim=4)
second_last_context_layer.unsqueeze_(2)
# 5th PART
# last block (global) attention scores
# q[-1] x (k[0], k[1], k[2], k[3], .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
last_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, -1], key_layer, ndim=4)
last_product = last_product * rsqrt_d
last_product += (1.0 - to_mask) * attn_mask_penalty
last_attn_weights = nn.functional.softmax(last_product, dim=-1) # [bsz, n_heads, from_block_size, n]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
last_context_layer = self.torch_bmm_nd(last_attn_weights, value_layer, ndim=4)
last_context_layer.unsqueeze_(2)
# combining representations of all tokens
context_layer = torch.cat(
[first_context_layer, second_context_layer, context_layer, second_last_context_layer, last_context_layer],
dim=2,
)
context_layer = context_layer.view((bsz, n_heads, from_seq_len, -1)) * from_mask
context_layer = torch.transpose(context_layer, 1, 2)
# this is just for visualizing; forward pass doesn't depend on following code
if output_attentions:
# TODO(PVP): need to verify if below code is correct
attention_probs = torch.zeros(
bsz, n_heads, from_seq_len, to_seq_len, dtype=torch.float, device=context_layer.device
)
# 1st query block
# corresponding to `first_context_layer`
attention_probs[:, :, :from_block_size, :] = first_attn_weights # all keys global
# 2nd query block
# corresponding to `second_context_layer`
attention_probs[:, :, from_block_size : 2 * from_block_size, : 3 * to_block_size] = second_attn_weights[
:, :, :, : 3 * to_block_size
] # 1st three key blocks (global + sliding)
attention_probs[:, :, from_block_size : 2 * from_block_size, -to_block_size:] = second_attn_weights[
:, :, :, 3 * to_block_size : 4 * to_block_size
] # last key block (global)
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, second_attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[:, 4 * to_block_size :]
attn_probs_view[p1, p2, 1, :, i2[0]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# Middle query blocks
# corresponding to `context_layer`
# sliding keys
for q_idx in range(from_seq_len // from_block_size - 4):
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)[:, :, 2:-2, :, 1:-1, :]
right_slice = attn_weights[:, :, q_idx, :, to_block_size : 4 * to_block_size]
attn_probs_view[:, :, q_idx, :, q_idx : q_idx + 3, :] = right_slice.view(
bsz, n_heads, from_block_size, 3, to_block_size
) # inner_band_product
# global keys (corresponding to 1st key block)
attention_probs[:, :, 2 * from_block_size : -2 * from_block_size, :to_block_size] = attn_weights[
:, :, :, :, :to_block_size
].view(bsz, n_heads, -1, to_block_size) # first_band_product
# global keys (corresponding to last key block)
attention_probs[:, :, 2 * from_block_size : -2 * from_block_size, -to_block_size:] = attn_weights[
:, :, :, :, -to_block_size:
].view(bsz, n_heads, -1, to_block_size) # last_band_product
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
for q_idx in range(1, len(i2) - 1):
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[q_idx - 1, :, 4 * to_block_size : -to_block_size]
attn_probs_view[p1, p2, q_idx + 1, :, i2[q_idx]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# Second-last query block
# corresponding to `second_last_context_layer`
attention_probs[:, :, -2 * from_block_size : -from_block_size, :to_block_size] = second_last_attn_weights[
:, :, :, :to_block_size
] # 1st key block (global)
attention_probs[
:, :, -2 * from_block_size : -from_block_size, -3 * to_block_size :
] = second_last_attn_weights[
:, :, :, to_block_size : 4 * to_block_size
] # last three blocks (global + sliding)
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, second_last_attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[:, 4 * to_block_size :]
attn_probs_view[p1, p2, -2, :, i2[-1]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# last query block
# corresponding to `last_context_layer`
attention_probs[:, :, -from_block_size:, :] = last_attn_weights # all keys global
else:
attention_probs = None
return context_layer, attention_probs
@staticmethod
def torch_gather_b2(params, indices):
# this operation is equivalent to tf.gather when batch_dims=2
if params.shape[:2] != indices.shape[:2]:
raise ValueError(
"Make sure that the first two dimensions of params and indices are identical, but"
f" they are params: {params.shape[:2]} vs. indices: {indices.shape[:2]}"
)
num_indices_to_gather = indices.shape[-2] * indices.shape[-1]
num_indices_to_pick_from = params.shape[2]
shift = torch.arange(indices.shape[0] * indices.shape[1] * num_indices_to_gather, device=indices.device)
indices_shift = torch.div(shift, num_indices_to_gather, rounding_mode="floor") * num_indices_to_pick_from
flattened_indices = indices.view(-1) + indices_shift
flattened_params = params.reshape(-1, params.shape[-2], params.shape[-1])
out_flattened = flattened_params.index_select(0, flattened_indices)
out = out_flattened.reshape(params.shape[:2] + (num_indices_to_gather,) + params.shape[3:])
return out
@staticmethod
def _create_rand_mask_from_inputs(
from_blocked_mask,
to_blocked_mask,
rand_attn,
num_attention_heads,
num_rand_blocks,
batch_size,
from_seq_length,
from_block_size,
):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
rand_attn: [batch_size, num_attention_heads,
from_seq_length//from_block_size-2, num_rand_blocks]
num_attention_heads: int. Number of attention heads.
num_rand_blocks: int. Number of random chunks per row.
batch_size: int. Batch size for computation.
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
Returns:
float Tensor of shape [batch_size, num_attention_heads, from_seq_length//from_block_size-2,
from_block_size, num_rand_blocks*to_block_size].
"""
num_windows = from_seq_length // from_block_size - 2
rand_mask = torch.stack([p1[i1.flatten()] for p1, i1 in zip(to_blocked_mask, rand_attn)])
rand_mask = rand_mask.view(batch_size, num_attention_heads, num_windows, num_rand_blocks * from_block_size)
rand_mask = torch.einsum("blq,bhlk->bhlqk", from_blocked_mask[:, 1:-1], rand_mask)
return rand_mask
@staticmethod
def _get_rand_attn_plan(from_seq_length, from_block_size, num_rand_blocks):
"""
Gives the plan of where to put random attention.
Args:
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
num_rand_blocks: int. Number of random chunks per row.
Returns:
plan_from_length: ending location of from block plan_num_rand_blocks: number of random ending location for
each block
"""
plan_from_length = []
plan_num_rand_blocks = []
if (2 * num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((2 * num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(0)
elif (num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks // 2)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks - (num_rand_blocks // 2))
else:
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks)
return plan_from_length, plan_num_rand_blocks
def _bigbird_block_rand_mask(
self, from_seq_length, to_seq_length, from_block_size, to_block_size, num_rand_blocks, last_idx=-1
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_rand_blocks: int. Number of random chunks per row.
last_idx: if -1 then num_rand_blocks blocks chosen anywhere in to sequence,
if positive then num_rand_blocks blocks chosen only up to last_idx.
Returns:
adjacency list of size from_seq_length//from_block_size-2 by num_rand_blocks
"""
# using this method when from_seq_length in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rand_attn = np.zeros((from_seq_length // from_block_size - 2, num_rand_blocks), dtype=np.int32)
# During inference (eval) no randomness
if not self.training:
return rand_attn
middle_seq = np.arange(1, to_seq_length // to_block_size - 1, dtype=np.int32)
last = to_seq_length // to_block_size - 1
if last_idx > (2 * to_block_size):
last = (last_idx // to_block_size) - 1
r = num_rand_blocks # shorthand
for i in range(1, from_seq_length // from_block_size - 1):
start = i - 2
end = i
if i == 1:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[2:last])[:r]
elif i == 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[3:last])[:r]
elif i == from_seq_length // from_block_size - 3:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -3: should have been sliced till last-3
elif i == from_seq_length // from_block_size - 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -4: should have been sliced till last-4
else:
if start > last:
start = last
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
elif (end + 1) == last:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
else:
rand_attn[i - 1, :] = np.random.permutation(
np.concatenate((middle_seq[:start], middle_seq[end + 1 : last]))
)[:r]
return rand_attn
def _bigbird_block_rand_mask_with_head(
self,
from_seq_length,
to_seq_length,
from_block_size,
to_block_size,
num_heads,
plan_from_length,
plan_num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_top=1,
global_block_bottom=1,
global_block_left=1,
global_block_right=1,
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_heads: int. total number of heads.
plan_from_length: list. plan from length where num_random_blocks are chosen from.
plan_num_rand_blocks: list. number of rand blocks within the plan.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_top: int. number of blocks at the top.
global_block_bottom: int. number of blocks at the bottom.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
adjacency list of size num_head where each element is of size from_seq_length//from_block_size-2 by
num_rand_blocks
"""
# using this method when from_seq_length not in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
if from_seq_length not in plan_from_length:
raise ValueError("Error from sequence length not in plan!")
# Total number of blocks in the mmask
num_blocks = from_seq_length // from_block_size
# Number of blocks per plan
plan_block_length = np.array(plan_from_length) // from_block_size
# till when to follow plan
max_plan_idx = plan_from_length.index(from_seq_length)
# Random Attention adjacency list
rand_attn = [
np.zeros((num_blocks, np.sum(plan_num_rand_blocks[: max_plan_idx + 1])), dtype=np.int32)
for i in range(num_heads)
]
# During inference (eval) no randomness
if not self.training:
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
# We will go iteratively over the plan blocks and pick random number of
# Attention blocks from the legally allowed blocks
for plan_idx in range(max_plan_idx + 1):
rnd_r_cnt = 0
if plan_idx > 0:
# set the row for all from_blocks starting from 0 to
# plan_block_length[plan_idx-1]
# column indx start fromm plan_block_length[plan_idx-1] and ends at
# plan_block_length[plan_idx]
if plan_num_rand_blocks[plan_idx] > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
for blk_rw_idx in range(global_block_top, plan_block_length[plan_idx - 1]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=plan_block_length[plan_idx - 1],
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for pl_id in range(plan_idx):
if plan_num_rand_blocks[pl_id] == 0:
continue
for blk_rw_idx in range(plan_block_length[plan_idx - 1], plan_block_length[plan_idx]):
rnd_r_cnt = 0
to_start_block_id = 0
if pl_id > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:pl_id]))
to_start_block_id = plan_block_length[pl_id - 1]
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: pl_id + 1]))
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[pl_id],
num_rand_blocks=plan_num_rand_blocks[pl_id],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
if plan_num_rand_blocks[plan_idx] == 0:
continue
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
from_start_block_id = global_block_top
to_start_block_id = 0
if plan_idx > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
from_start_block_id = plan_block_length[plan_idx - 1]
to_start_block_id = plan_block_length[plan_idx - 1]
for blk_rw_idx in range(from_start_block_id, plan_block_length[plan_idx]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
@staticmethod
def _get_single_block_row_attention(
block_id,
to_start_block_id,
to_end_block_id,
num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_left=1,
global_block_right=1,
):
"""
For a single row block get random row attention.
Args:
block_id: int. block id of row.
to_start_block_id: int. random attention column start id.
to_end_block_id: int. random attention column end id.
num_rand_blocks: int. number of random blocks to be selected.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
row containing the random attention vector of size num_rand_blocks.
"""
# list of to_blocks from which to choose random attention
to_block_list = np.arange(to_start_block_id, to_end_block_id, dtype=np.int32)
# permute the blocks
perm_block = np.random.permutation(to_block_list)
# illegal blocks for the current block id, using window
illegal_blocks = list(range(block_id - window_block_left, block_id + window_block_right + 1))
# Add blocks at the start and at the end
illegal_blocks.extend(list(range(global_block_left)))
illegal_blocks.extend(list(range(to_end_block_id - global_block_right, to_end_block_id)))
# The second from_block cannot choose random attention on second last to_block
if block_id == 1:
illegal_blocks.append(to_end_block_id - 2)
# The second last from_block cannot choose random attention on second to_block
if block_id == to_end_block_id - 2:
illegal_blocks.append(1)
selected_random_blokcs = []
for i in range(to_end_block_id - to_start_block_id):
if perm_block[i] not in illegal_blocks:
selected_random_blokcs.append(perm_block[i])
if len(selected_random_blokcs) == num_rand_blocks:
break
return np.array(selected_random_blokcs, dtype=np.int32)
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->BigBird
class BigBirdSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class BigBirdAttention(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.attention_type = config.attention_type
self.config = config
self.seed = seed
if self.config.attention_type == "original_full":
self.self = BigBirdSelfAttention(config)
elif self.config.attention_type == "block_sparse":
self.self = BigBirdBlockSparseAttention(config, seed)
else:
raise ValueError(
f"attention_type can either be original_full or block_sparse, but is {self.config.attention_type}"
)
self.output = BigBirdSelfOutput(config)
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
if value == "original_full":
# copy all weights to new full attention class
attn_weights = BigBirdSelfAttention(self.config)
else:
# copy all weights to new sparse attention class
attn_weights = BigBirdBlockSparseAttention(self.config, self.seed)
attn_weights.query = self.self.query
attn_weights.value = self.self.value
attn_weights.key = self.self.key
self.self = attn_weights
self.attention_type = value
if not self.training:
self.self.eval()
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
# block_sparse config
band_mask=None,
from_mask=None,
to_mask=None,
from_blocked_mask=None,
to_blocked_mask=None,
):
# fp16 compatibility
if band_mask is not None:
band_mask = band_mask.to(hidden_states.dtype)
if from_mask is not None:
from_mask = from_mask.to(hidden_states.dtype)
if to_mask is not None:
to_mask = to_mask.to(hidden_states.dtype)
if self.attention_type == "original_full":
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
if encoder_hidden_states is not None:
raise ValueError("BigBird cannot be used as a decoder when config.attention_type != 'original_full'")
self_outputs = self.self(
hidden_states, band_mask, from_mask, to_mask, from_blocked_mask, to_blocked_mask, output_attentions
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->BigBird
class BigBirdIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->BigBird
class BigBirdOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class BigBirdLayer(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.config = config
self.attention_type = config.attention_type
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = BigBirdAttention(config, seed=seed)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise TypeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = BigBirdAttention(config)
self.intermediate = BigBirdIntermediate(config)
self.output = BigBirdOutput(config)
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
self.attention.set_attention_type(value)
if self.add_cross_attention:
self.crossattention.set_attention_type(value)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
band_mask=None,
from_mask=None,
to_mask=None,
blocked_encoder_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=self_attn_past_key_value,
output_attentions=output_attentions,
band_mask=band_mask,
from_mask=from_mask,
to_mask=to_mask,
from_blocked_mask=blocked_encoder_mask,
to_blocked_mask=blocked_encoder_mask,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with "
" cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class BigBirdEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.attention_type = config.attention_type
self.layer = nn.ModuleList(
[BigBirdLayer(config, seed=layer_idx) for layer_idx in range(config.num_hidden_layers)]
)
self.gradient_checkpointing = False
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
for layer in self.layer:
layer.set_attention_type(value)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
band_mask=None,
from_mask=None,
to_mask=None,
blocked_encoder_mask=None,
return_dict=True,
) -> Union[BaseModelOutputWithPastAndCrossAttentions, Tuple]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
past_key_value,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert->BigBird
class BigBirdPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert->BigBird
class BigBirdLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = BigBirdPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert->BigBird
class BigBirdOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = BigBirdLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
# Copied from transformers.models.bert.modeling_bert.BertOnlyNSPHead with Bert->BigBird
class BigBirdOnlyNSPHead(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, pooled_output):
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
# Copied from transformers.models.bert.modeling_bert.BertPreTrainingHeads with Bert->BigBird
class BigBirdPreTrainingHeads(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = BigBirdLMPredictionHead(config)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output, pooled_output):
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class BigBirdPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BigBirdConfig
load_tf_weights = load_tf_weights_in_big_bird
base_model_prefix = "bert"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
BIG_BIRD_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`BigBirdConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
BIG_BIRD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert *input_ids* indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@dataclass
class BigBirdForPreTrainingOutput(ModelOutput):
"""
Output type of [`BigBirdForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
prediction_logits: torch.FloatTensor = None
seq_relationship_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BigBirdForQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
pooler_output (`torch.FloatTensor` of shape `(batch_size, 1)`):
pooler output from BigBigModel
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
start_logits: torch.FloatTensor = None
end_logits: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@add_start_docstrings(
"The bare BigBird Model transformer outputting raw hidden-states without any specific head on top.",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdModel(BigBirdPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.attention_type = self.config.attention_type
self.config = config
self.block_size = self.config.block_size
self.embeddings = BigBirdEmbeddings(config)
self.encoder = BigBirdEncoder(config)
if add_pooling_layer:
self.pooler = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
else:
self.pooler = None
self.activation = None
if self.attention_type != "original_full" and config.add_cross_attention:
logger.warning(
"When using `BigBirdForCausalLM` as decoder, then `attention_type` must be `original_full`. Setting"
" `attention_type=original_full`"
)
self.set_attention_type("original_full")
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
self.encoder.set_attention_type(value)
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BaseModelOutputWithPoolingAndCrossAttentions, Tuple[torch.FloatTensor]]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# in order to use block_sparse attention, sequence_length has to be at least
# bigger than all global attentions: 2 * block_size
# + sliding tokens: 3 * block_size
# + random tokens: 2 * num_random_blocks * block_size
max_tokens_to_attend = (5 + 2 * self.config.num_random_blocks) * self.config.block_size
if self.attention_type == "block_sparse" and seq_length <= max_tokens_to_attend:
# change attention_type from block_sparse to original_full
sequence_length = input_ids.size(1) if input_ids is not None else inputs_embeds.size(1)
logger.warning(
"Attention type 'block_sparse' is not possible if sequence_length: "
f"{sequence_length} <= num global tokens: 2 * config.block_size "
"+ min. num sliding tokens: 3 * config.block_size "
"+ config.num_random_blocks * config.block_size "
"+ additional buffer: config.num_random_blocks * config.block_size "
f"= {max_tokens_to_attend} with config.block_size "
f"= {self.config.block_size}, config.num_random_blocks "
f"= {self.config.num_random_blocks}. "
"Changing attention type to 'original_full'..."
)
self.set_attention_type("original_full")
if self.attention_type == "block_sparse":
(
padding_len,
input_ids,
attention_mask,
token_type_ids,
position_ids,
inputs_embeds,
) = self._pad_to_block_size(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
pad_token_id=self.config.pad_token_id,
)
else:
padding_len = 0
if self.attention_type == "block_sparse":
blocked_encoder_mask, band_mask, from_mask, to_mask = self.create_masks_for_block_sparse_attn(
attention_mask, self.block_size
)
extended_attention_mask = None
elif self.attention_type == "original_full":
blocked_encoder_mask = None
band_mask = None
from_mask = None
to_mask = None
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
else:
raise ValueError(
f"attention_type can either be original_full or block_sparse, but is {self.attention_type}"
)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
band_mask=band_mask,
from_mask=from_mask,
to_mask=to_mask,
blocked_encoder_mask=blocked_encoder_mask,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooler_output = self.activation(self.pooler(sequence_output[:, 0, :])) if (self.pooler is not None) else None
# undo padding
if padding_len > 0:
# unpad `sequence_output` because the calling function is expecting a length == input_ids.size(1)
sequence_output = sequence_output[:, :-padding_len]
if not return_dict:
return (sequence_output, pooler_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooler_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
@staticmethod
def create_masks_for_block_sparse_attn(attention_mask: torch.Tensor, block_size: int):
batch_size, seq_length = attention_mask.size()
if seq_length % block_size != 0:
raise ValueError(
f"Sequence length must be multiple of block size, but sequence length is {seq_length}, while block"
f" size is {block_size}."
)
def create_band_mask_from_inputs(from_blocked_mask, to_blocked_mask):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
Returns:
float Tensor of shape [batch_size, 1, from_seq_length//from_block_size-4, from_block_size,
3*to_block_size].
"""
exp_blocked_to_pad = torch.cat(
[to_blocked_mask[:, 1:-3], to_blocked_mask[:, 2:-2], to_blocked_mask[:, 3:-1]], dim=2
)
band_mask = torch.einsum("blq,blk->blqk", from_blocked_mask[:, 2:-2], exp_blocked_to_pad)
band_mask.unsqueeze_(1)
return band_mask
blocked_encoder_mask = attention_mask.view(batch_size, seq_length // block_size, block_size)
band_mask = create_band_mask_from_inputs(blocked_encoder_mask, blocked_encoder_mask)
from_mask = attention_mask.view(batch_size, 1, seq_length, 1)
to_mask = attention_mask.view(batch_size, 1, 1, seq_length)
return blocked_encoder_mask, band_mask, from_mask, to_mask
def _pad_to_block_size(
self,
input_ids: torch.Tensor,
attention_mask: torch.Tensor,
token_type_ids: torch.Tensor,
position_ids: torch.Tensor,
inputs_embeds: torch.Tensor,
pad_token_id: int,
):
"""A helper function to pad tokens and mask to work with implementation of BigBird block-sparse attention."""
# padding
block_size = self.config.block_size
input_shape = input_ids.shape if input_ids is not None else inputs_embeds.shape
batch_size, seq_len = input_shape[:2]
padding_len = (block_size - seq_len % block_size) % block_size
if padding_len > 0:
logger.info(
f"Input ids are automatically padded from {seq_len} to {seq_len + padding_len} to be a multiple of "
f"`config.block_size`: {block_size}"
)
if input_ids is not None:
input_ids = nn.functional.pad(input_ids, (0, padding_len), value=pad_token_id)
if position_ids is not None:
# pad with position_id = pad_token_id as in modeling_bigbird.BigBirdEmbeddings
position_ids = nn.functional.pad(position_ids, (0, padding_len), value=pad_token_id)
if inputs_embeds is not None:
input_ids_padding = inputs_embeds.new_full(
(batch_size, padding_len),
self.config.pad_token_id,
dtype=torch.long,
)
inputs_embeds_padding = self.embeddings(input_ids_padding)
inputs_embeds = torch.cat([inputs_embeds, inputs_embeds_padding], dim=-2)
attention_mask = nn.functional.pad(
attention_mask, (0, padding_len), value=False
) # no attention on the padding tokens
token_type_ids = nn.functional.pad(token_type_ids, (0, padding_len), value=0) # pad with token_type_id = 0
return padding_len, input_ids, attention_mask, token_type_ids, position_ids, inputs_embeds
class BigBirdForPreTraining(BigBirdPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
self.bert = BigBirdModel(config, add_pooling_layer=True)
self.cls = BigBirdPreTrainingHeads(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BigBirdForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.FloatTensor] = None,
next_sentence_label: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BigBirdForPreTrainingOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
next_sentence_label (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. If specified, nsp loss will be
added to masked_lm loss. Input should be a sequence pair (see `input_ids` docstring) Indices should be in
`[0, 1]`:
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, BigBirdForPreTraining
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForPreTraining.from_pretrained("google/bigbird-roberta-base")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)
total_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
total_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if next_sentence_label is not None and total_loss is not None:
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
total_loss = total_loss + next_sentence_loss
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return BigBirdForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""BigBird Model with a `language modeling` head on top.""", BIG_BIRD_START_DOCSTRING)
class BigBirdForMaskedLM(BigBirdPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `BigBirdForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.bert = BigBirdModel(config)
self.cls = BigBirdOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[MaskedLMOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForMaskedLM
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForMaskedLM.from_pretrained("google/bigbird-roberta-base")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> # select random long article
>>> LONG_ARTICLE_TARGET = squad_ds[81514]["context"]
>>> # select random sentence
>>> LONG_ARTICLE_TARGET[332:398]
'the highest values are very close to the theoretical maximum value'
>>> # add mask_token
>>> LONG_ARTICLE_TO_MASK = LONG_ARTICLE_TARGET.replace("maximum", "[MASK]")
>>> inputs = tokenizer(LONG_ARTICLE_TO_MASK, return_tensors="pt")
>>> # long article input
>>> list(inputs["input_ids"].shape)
[1, 919]
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> # retrieve index of [MASK]
>>> mask_token_index = (inputs.input_ids == tokenizer.mask_token_id)[0].nonzero(as_tuple=True)[0]
>>> predicted_token_id = logits[0, mask_token_index].argmax(axis=-1)
>>> tokenizer.decode(predicted_token_id)
'maximum'
```
```python
>>> labels = tokenizer(LONG_ARTICLE_TARGET, return_tensors="pt")["input_ids"]
>>> labels = torch.where(inputs.input_ids == tokenizer.mask_token_id, labels, -100)
>>> outputs = model(**inputs, labels=labels)
>>> round(outputs.loss.item(), 2)
1.99
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def prepare_inputs_for_generation(self, input_ids, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
effective_batch_size = input_shape[0]
# add a dummy token
if self.config.pad_token_id is None:
raise ValueError("The PAD token should be defined for generation")
attention_mask = torch.cat([attention_mask, attention_mask.new_zeros((attention_mask.shape[0], 1))], dim=-1)
dummy_token = torch.full(
(effective_batch_size, 1), self.config.pad_token_id, dtype=torch.long, device=input_ids.device
)
input_ids = torch.cat([input_ids, dummy_token], dim=1)
return {"input_ids": input_ids, "attention_mask": attention_mask}
@add_start_docstrings(
"""BigBird Model with a `language modeling` head on top for CLM fine-tuning.""", BIG_BIRD_START_DOCSTRING
)
class BigBirdForCausalLM(BigBirdPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if not config.is_decoder:
logger.warning("If you want to use `BigBirdForCausalLM` as a standalone, add `is_decoder=True.`")
self.bert = BigBirdModel(config)
self.cls = BigBirdOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutputWithCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[CausalLMOutputWithCrossAttentions, Tuple[torch.FloatTensor]]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels n `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
lm_loss = None
if labels is not None:
# we are doing next-token prediction; shift prediction scores and input ids by one
shifted_prediction_scores = prediction_scores[:, :-1, :].contiguous()
labels = labels[:, 1:].contiguous()
loss_fct = CrossEntropyLoss()
lm_loss = loss_fct(shifted_prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((lm_loss,) + output) if lm_loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=lm_loss,
logits=prediction_scores,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_shape)
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
past_length = past_key_values[0][0].shape[2]
# Some generation methods already pass only the last input ID
if input_ids.shape[1] > past_length:
remove_prefix_length = past_length
else:
# Default to old behavior: keep only final ID
remove_prefix_length = input_ids.shape[1] - 1
input_ids = input_ids[:, remove_prefix_length:]
return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past_key_values}
def _reorder_cache(self, past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past[:2])
+ layer_past[2:],
)
return reordered_past
class BigBirdClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
self.config = config
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = ACT2FN[self.config.hidden_act](x)
x = self.dropout(x)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
BigBird Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForSequenceClassification(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.bert = BigBirdModel(config)
self.classifier = BigBirdClassificationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[SequenceClassifierOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForSequenceClassification
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("l-yohai/bigbird-roberta-base-mnli")
>>> model = BigBirdForSequenceClassification.from_pretrained("l-yohai/bigbird-roberta-base-mnli")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> LONG_ARTICLE = squad_ds[81514]["context"]
>>> inputs = tokenizer(LONG_ARTICLE, return_tensors="pt")
>>> # long input article
>>> list(inputs["input_ids"].shape)
[1, 919]
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> num_labels = len(model.config.id2label)
>>> model = BigBirdForSequenceClassification.from_pretrained(
... "l-yohai/bigbird-roberta-base-mnli", num_labels=num_labels
... )
>>> labels = torch.tensor(1)
>>> loss = model(**inputs, labels=labels).loss
>>> round(loss.item(), 2)
1.13
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForMultipleChoice(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.bert = BigBirdModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(
BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[MultipleChoiceModelOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForTokenClassification(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.bert = BigBirdModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[TokenClassifierOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class BigBirdForQuestionAnsweringHead(nn.Module):
"""Head for question answering tasks."""
def __init__(self, config):
super().__init__()
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.intermediate = BigBirdIntermediate(config)
self.output = BigBirdOutput(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, encoder_output):
hidden_states = self.dropout(encoder_output)
hidden_states = self.intermediate(hidden_states)
hidden_states = self.output(hidden_states, encoder_output)
hidden_states = self.qa_outputs(hidden_states)
return hidden_states
@add_start_docstrings(
"""
BigBird Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForQuestionAnswering(BigBirdPreTrainedModel):
def __init__(self, config, add_pooling_layer=False):
super().__init__(config)
config.num_labels = 2
self.num_labels = config.num_labels
self.sep_token_id = config.sep_token_id
self.bert = BigBirdModel(config, add_pooling_layer=add_pooling_layer)
self.qa_classifier = BigBirdForQuestionAnsweringHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BigBirdForQuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
question_lengths: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BigBirdForQuestionAnsweringModelOutput, Tuple[torch.FloatTensor]]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForQuestionAnswering
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForQuestionAnswering.from_pretrained("google/bigbird-roberta-base")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> # select random article and question
>>> LONG_ARTICLE = squad_ds[81514]["context"]
>>> QUESTION = squad_ds[81514]["question"]
>>> QUESTION
'During daytime how high can the temperatures reach?'
>>> inputs = tokenizer(QUESTION, LONG_ARTICLE, return_tensors="pt")
>>> # long article and question input
>>> list(inputs["input_ids"].shape)
[1, 929]
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_token_ids = inputs.input_ids[0, answer_start_index : answer_end_index + 1]
>>> predict_answer_token = tokenizer.decode(predict_answer_token_ids)
```
```python
>>> target_start_index, target_end_index = torch.tensor([130]), torch.tensor([132])
>>> outputs = model(**inputs, start_positions=target_start_index, end_positions=target_end_index)
>>> loss = outputs.loss
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
seqlen = input_ids.size(1) if input_ids is not None else inputs_embeds.size(1)
if question_lengths is None and input_ids is not None:
# assuming input_ids format: <cls> <question> <sep> context <sep>
question_lengths = torch.argmax(input_ids.eq(self.sep_token_id).int(), dim=-1) + 1
question_lengths.unsqueeze_(1)
logits_mask = None
if question_lengths is not None:
# setting lengths logits to `-inf`
logits_mask = self.prepare_question_mask(question_lengths, seqlen)
if token_type_ids is None:
token_type_ids = torch.ones(logits_mask.size(), dtype=int, device=logits_mask.device) - logits_mask
logits_mask = logits_mask
logits_mask[:, 0] = False
logits_mask.unsqueeze_(2)
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_classifier(sequence_output)
if logits_mask is not None:
# removing question tokens from the competition
logits = logits - logits_mask * 1e6
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return BigBirdForQuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
pooler_output=outputs.pooler_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@staticmethod
def prepare_question_mask(q_lengths: torch.Tensor, maxlen: int):
# q_lengths -> (bz, 1)
mask = torch.arange(0, maxlen).to(q_lengths.device)
mask.unsqueeze_(0) # -> (1, maxlen)
mask = torch.where(mask < q_lengths, 1, 0)
return mask
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/auto_factory.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Factory function to build auto-model classes."""
import copy
import importlib
import json
import os
import warnings
from collections import OrderedDict
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...utils import (
CONFIG_NAME,
cached_file,
copy_func,
extract_commit_hash,
find_adapter_config_file,
is_peft_available,
logging,
requires_backends,
)
from .configuration_auto import AutoConfig, model_type_to_module_name, replace_list_option_in_docstrings
logger = logging.get_logger(__name__)
CLASS_DOCSTRING = """
This is a generic model class that will be instantiated as one of the model classes of the library when created
with the [`~BaseAutoModelClass.from_pretrained`] class method or the [`~BaseAutoModelClass.from_config`] class
method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
FROM_CONFIG_DOCSTRING = """
Instantiates one of the model classes of the library from a configuration.
Note:
Loading a model from its configuration file does **not** load the model weights. It only affects the
model's configuration. Use [`~BaseAutoModelClass.from_pretrained`] to load the model weights.
Args:
config ([`PretrainedConfig`]):
The model class to instantiate is selected based on the configuration class:
List options
Examples:
```python
>>> from transformers import AutoConfig, BaseAutoModelClass
>>> # Download configuration from huggingface.co and cache.
>>> config = AutoConfig.from_pretrained("checkpoint_placeholder")
>>> model = BaseAutoModelClass.from_config(config)
```
"""
FROM_PRETRAINED_TORCH_DOCSTRING = """
Instantiate one of the model classes of the library from a pretrained model.
The model class to instantiate is selected based on the `model_type` property of the config object (either
passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's missing, by
falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
The model is set in evaluation mode by default using `model.eval()` (so for instance, dropout modules are
deactivated). To train the model, you should first set it back in training mode with `model.train()`
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a pretrained model hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing model weights saved using
[`~PreTrainedModel.save_pretrained`], e.g., `./my_model_directory/`.
- A path or url to a *tensorflow index checkpoint file* (e.g, `./tf_model/model.ckpt.index`). In
this case, `from_tf` should be set to `True` and a configuration object should be provided as
`config` argument. This loading path is slower than converting the TensorFlow checkpoint in a
PyTorch model using the provided conversion scripts and loading the PyTorch model afterwards.
model_args (additional positional arguments, *optional*):
Will be passed along to the underlying model `__init__()` method.
config ([`PretrainedConfig`], *optional*):
Configuration for the model to use instead of an automatically loaded configuration. Configuration can
be automatically loaded when:
- The model is a model provided by the library (loaded with the *model id* string of a pretrained
model).
- The model was saved using [`~PreTrainedModel.save_pretrained`] and is reloaded by supplying the
save directory.
- The model is loaded by supplying a local directory as `pretrained_model_name_or_path` and a
configuration JSON file named *config.json* is found in the directory.
state_dict (*Dict[str, torch.Tensor]*, *optional*):
A state dictionary to use instead of a state dictionary loaded from saved weights file.
This option can be used if you want to create a model from a pretrained configuration but load your own
weights. In this case though, you should check if using [`~PreTrainedModel.save_pretrained`] and
[`~PreTrainedModel.from_pretrained`] is not a simpler option.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
from_tf (`bool`, *optional*, defaults to `False`):
Load the model weights from a TensorFlow checkpoint save file (see docstring of
`pretrained_model_name_or_path` argument).
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download of the model weights and configuration files, overriding the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
output_loading_info(`bool`, *optional*, defaults to `False`):
Whether ot not to also return a dictionary containing missing keys, unexpected keys and error messages.
local_files_only(`bool`, *optional*, defaults to `False`):
Whether or not to only look at local files (e.g., not try downloading the model).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
code_revision (`str`, *optional*, defaults to `"main"`):
The specific revision to use for the code on the Hub, if the code leaves in a different repository than
the rest of the model. It can be a branch name, a tag name, or a commit id, since we use a git-based
system for storing models and other artifacts on huggingface.co, so `revision` can be any identifier
allowed by git.
kwargs (additional keyword arguments, *optional*):
Can be used to update the configuration object (after it being loaded) and initiate the model (e.g.,
`output_attentions=True`). Behaves differently depending on whether a `config` is provided or
automatically loaded:
- If a configuration is provided with `config`, `**kwargs` will be directly passed to the
underlying model's `__init__` method (we assume all relevant updates to the configuration have
already been done)
- If a configuration is not provided, `kwargs` will be first passed to the configuration class
initialization function ([`~PretrainedConfig.from_pretrained`]). Each key of `kwargs` that
corresponds to a configuration attribute will be used to override said attribute with the
supplied `kwargs` value. Remaining keys that do not correspond to any configuration attribute
will be passed to the underlying model's `__init__` function.
Examples:
```python
>>> from transformers import AutoConfig, BaseAutoModelClass
>>> # Download model and configuration from huggingface.co and cache.
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder")
>>> # Update configuration during loading
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder", output_attentions=True)
>>> model.config.output_attentions
True
>>> # Loading from a TF checkpoint file instead of a PyTorch model (slower)
>>> config = AutoConfig.from_pretrained("./tf_model/shortcut_placeholder_tf_model_config.json")
>>> model = BaseAutoModelClass.from_pretrained(
... "./tf_model/shortcut_placeholder_tf_checkpoint.ckpt.index", from_tf=True, config=config
... )
```
"""
FROM_PRETRAINED_TF_DOCSTRING = """
Instantiate one of the model classes of the library from a pretrained model.
The model class to instantiate is selected based on the `model_type` property of the config object (either
passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's missing, by
falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a pretrained model hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing model weights saved using
[`~PreTrainedModel.save_pretrained`], e.g., `./my_model_directory/`.
- A path or url to a *PyTorch state_dict save file* (e.g, `./pt_model/pytorch_model.bin`). In this
case, `from_pt` should be set to `True` and a configuration object should be provided as `config`
argument. This loading path is slower than converting the PyTorch model in a TensorFlow model
using the provided conversion scripts and loading the TensorFlow model afterwards.
model_args (additional positional arguments, *optional*):
Will be passed along to the underlying model `__init__()` method.
config ([`PretrainedConfig`], *optional*):
Configuration for the model to use instead of an automatically loaded configuration. Configuration can
be automatically loaded when:
- The model is a model provided by the library (loaded with the *model id* string of a pretrained
model).
- The model was saved using [`~PreTrainedModel.save_pretrained`] and is reloaded by supplying the
save directory.
- The model is loaded by supplying a local directory as `pretrained_model_name_or_path` and a
configuration JSON file named *config.json* is found in the directory.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
from_pt (`bool`, *optional*, defaults to `False`):
Load the model weights from a PyTorch checkpoint save file (see docstring of
`pretrained_model_name_or_path` argument).
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download of the model weights and configuration files, overriding the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
output_loading_info(`bool`, *optional*, defaults to `False`):
Whether ot not to also return a dictionary containing missing keys, unexpected keys and error messages.
local_files_only(`bool`, *optional*, defaults to `False`):
Whether or not to only look at local files (e.g., not try downloading the model).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
code_revision (`str`, *optional*, defaults to `"main"`):
The specific revision to use for the code on the Hub, if the code leaves in a different repository than
the rest of the model. It can be a branch name, a tag name, or a commit id, since we use a git-based
system for storing models and other artifacts on huggingface.co, so `revision` can be any identifier
allowed by git.
kwargs (additional keyword arguments, *optional*):
Can be used to update the configuration object (after it being loaded) and initiate the model (e.g.,
`output_attentions=True`). Behaves differently depending on whether a `config` is provided or
automatically loaded:
- If a configuration is provided with `config`, `**kwargs` will be directly passed to the
underlying model's `__init__` method (we assume all relevant updates to the configuration have
already been done)
- If a configuration is not provided, `kwargs` will be first passed to the configuration class
initialization function ([`~PretrainedConfig.from_pretrained`]). Each key of `kwargs` that
corresponds to a configuration attribute will be used to override said attribute with the
supplied `kwargs` value. Remaining keys that do not correspond to any configuration attribute
will be passed to the underlying model's `__init__` function.
Examples:
```python
>>> from transformers import AutoConfig, BaseAutoModelClass
>>> # Download model and configuration from huggingface.co and cache.
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder")
>>> # Update configuration during loading
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder", output_attentions=True)
>>> model.config.output_attentions
True
>>> # Loading from a PyTorch checkpoint file instead of a TensorFlow model (slower)
>>> config = AutoConfig.from_pretrained("./pt_model/shortcut_placeholder_pt_model_config.json")
>>> model = BaseAutoModelClass.from_pretrained(
... "./pt_model/shortcut_placeholder_pytorch_model.bin", from_pt=True, config=config
... )
```
"""
FROM_PRETRAINED_FLAX_DOCSTRING = """
Instantiate one of the model classes of the library from a pretrained model.
The model class to instantiate is selected based on the `model_type` property of the config object (either
passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's missing, by
falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a pretrained model hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing model weights saved using
[`~PreTrainedModel.save_pretrained`], e.g., `./my_model_directory/`.
- A path or url to a *PyTorch state_dict save file* (e.g, `./pt_model/pytorch_model.bin`). In this
case, `from_pt` should be set to `True` and a configuration object should be provided as `config`
argument. This loading path is slower than converting the PyTorch model in a TensorFlow model
using the provided conversion scripts and loading the TensorFlow model afterwards.
model_args (additional positional arguments, *optional*):
Will be passed along to the underlying model `__init__()` method.
config ([`PretrainedConfig`], *optional*):
Configuration for the model to use instead of an automatically loaded configuration. Configuration can
be automatically loaded when:
- The model is a model provided by the library (loaded with the *model id* string of a pretrained
model).
- The model was saved using [`~PreTrainedModel.save_pretrained`] and is reloaded by supplying the
save directory.
- The model is loaded by supplying a local directory as `pretrained_model_name_or_path` and a
configuration JSON file named *config.json* is found in the directory.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
from_pt (`bool`, *optional*, defaults to `False`):
Load the model weights from a PyTorch checkpoint save file (see docstring of
`pretrained_model_name_or_path` argument).
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download of the model weights and configuration files, overriding the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
output_loading_info(`bool`, *optional*, defaults to `False`):
Whether ot not to also return a dictionary containing missing keys, unexpected keys and error messages.
local_files_only(`bool`, *optional*, defaults to `False`):
Whether or not to only look at local files (e.g., not try downloading the model).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
code_revision (`str`, *optional*, defaults to `"main"`):
The specific revision to use for the code on the Hub, if the code leaves in a different repository than
the rest of the model. It can be a branch name, a tag name, or a commit id, since we use a git-based
system for storing models and other artifacts on huggingface.co, so `revision` can be any identifier
allowed by git.
kwargs (additional keyword arguments, *optional*):
Can be used to update the configuration object (after it being loaded) and initiate the model (e.g.,
`output_attentions=True`). Behaves differently depending on whether a `config` is provided or
automatically loaded:
- If a configuration is provided with `config`, `**kwargs` will be directly passed to the
underlying model's `__init__` method (we assume all relevant updates to the configuration have
already been done)
- If a configuration is not provided, `kwargs` will be first passed to the configuration class
initialization function ([`~PretrainedConfig.from_pretrained`]). Each key of `kwargs` that
corresponds to a configuration attribute will be used to override said attribute with the
supplied `kwargs` value. Remaining keys that do not correspond to any configuration attribute
will be passed to the underlying model's `__init__` function.
Examples:
```python
>>> from transformers import AutoConfig, BaseAutoModelClass
>>> # Download model and configuration from huggingface.co and cache.
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder")
>>> # Update configuration during loading
>>> model = BaseAutoModelClass.from_pretrained("checkpoint_placeholder", output_attentions=True)
>>> model.config.output_attentions
True
>>> # Loading from a PyTorch checkpoint file instead of a TensorFlow model (slower)
>>> config = AutoConfig.from_pretrained("./pt_model/shortcut_placeholder_pt_model_config.json")
>>> model = BaseAutoModelClass.from_pretrained(
... "./pt_model/shortcut_placeholder_pytorch_model.bin", from_pt=True, config=config
... )
```
"""
def _get_model_class(config, model_mapping):
supported_models = model_mapping[type(config)]
if not isinstance(supported_models, (list, tuple)):
return supported_models
name_to_model = {model.__name__: model for model in supported_models}
architectures = getattr(config, "architectures", [])
for arch in architectures:
if arch in name_to_model:
return name_to_model[arch]
elif f"TF{arch}" in name_to_model:
return name_to_model[f"TF{arch}"]
elif f"Flax{arch}" in name_to_model:
return name_to_model[f"Flax{arch}"]
# If not architecture is set in the config or match the supported models, the first element of the tuple is the
# defaults.
return supported_models[0]
class _BaseAutoModelClass:
# Base class for auto models.
_model_mapping = None
def __init__(self, *args, **kwargs):
raise EnvironmentError(
f"{self.__class__.__name__} is designed to be instantiated "
f"using the `{self.__class__.__name__}.from_pretrained(pretrained_model_name_or_path)` or "
f"`{self.__class__.__name__}.from_config(config)` methods."
)
@classmethod
def from_config(cls, config, **kwargs):
trust_remote_code = kwargs.pop("trust_remote_code", None)
has_remote_code = hasattr(config, "auto_map") and cls.__name__ in config.auto_map
has_local_code = type(config) in cls._model_mapping.keys()
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, config._name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
class_ref = config.auto_map[cls.__name__]
if "--" in class_ref:
repo_id, class_ref = class_ref.split("--")
else:
repo_id = config.name_or_path
model_class = get_class_from_dynamic_module(class_ref, repo_id, **kwargs)
if os.path.isdir(config._name_or_path):
model_class.register_for_auto_class(cls.__name__)
else:
cls.register(config.__class__, model_class, exist_ok=True)
_ = kwargs.pop("code_revision", None)
return model_class._from_config(config, **kwargs)
elif type(config) in cls._model_mapping.keys():
model_class = _get_model_class(config, cls._model_mapping)
return model_class._from_config(config, **kwargs)
raise ValueError(
f"Unrecognized configuration class {config.__class__} for this kind of AutoModel: {cls.__name__}.\n"
f"Model type should be one of {', '.join(c.__name__ for c in cls._model_mapping.keys())}."
)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
config = kwargs.pop("config", None)
trust_remote_code = kwargs.pop("trust_remote_code", None)
kwargs["_from_auto"] = True
hub_kwargs_names = [
"cache_dir",
"force_download",
"local_files_only",
"proxies",
"resume_download",
"revision",
"subfolder",
"use_auth_token",
"token",
]
hub_kwargs = {name: kwargs.pop(name) for name in hub_kwargs_names if name in kwargs}
code_revision = kwargs.pop("code_revision", None)
commit_hash = kwargs.pop("_commit_hash", None)
adapter_kwargs = kwargs.pop("adapter_kwargs", None)
token = hub_kwargs.pop("token", None)
use_auth_token = hub_kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if token is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
token = use_auth_token
if token is not None:
hub_kwargs["token"] = token
if commit_hash is None:
if not isinstance(config, PretrainedConfig):
# We make a call to the config file first (which may be absent) to get the commit hash as soon as possible
resolved_config_file = cached_file(
pretrained_model_name_or_path,
CONFIG_NAME,
_raise_exceptions_for_missing_entries=False,
_raise_exceptions_for_connection_errors=False,
**hub_kwargs,
)
commit_hash = extract_commit_hash(resolved_config_file, commit_hash)
else:
commit_hash = getattr(config, "_commit_hash", None)
if is_peft_available():
if adapter_kwargs is None:
adapter_kwargs = {}
if token is not None:
adapter_kwargs["token"] = token
maybe_adapter_path = find_adapter_config_file(
pretrained_model_name_or_path, _commit_hash=commit_hash, **adapter_kwargs
)
if maybe_adapter_path is not None:
with open(maybe_adapter_path, "r", encoding="utf-8") as f:
adapter_config = json.load(f)
adapter_kwargs["_adapter_model_path"] = pretrained_model_name_or_path
pretrained_model_name_or_path = adapter_config["base_model_name_or_path"]
if not isinstance(config, PretrainedConfig):
kwargs_orig = copy.deepcopy(kwargs)
# ensure not to pollute the config object with torch_dtype="auto" - since it's
# meaningless in the context of the config object - torch.dtype values are acceptable
if kwargs.get("torch_dtype", None) == "auto":
_ = kwargs.pop("torch_dtype")
# to not overwrite the quantization_config if config has a quantization_config
if kwargs.get("quantization_config", None) is not None:
_ = kwargs.pop("quantization_config")
config, kwargs = AutoConfig.from_pretrained(
pretrained_model_name_or_path,
return_unused_kwargs=True,
trust_remote_code=trust_remote_code,
code_revision=code_revision,
_commit_hash=commit_hash,
**hub_kwargs,
**kwargs,
)
# if torch_dtype=auto was passed here, ensure to pass it on
if kwargs_orig.get("torch_dtype", None) == "auto":
kwargs["torch_dtype"] = "auto"
if kwargs_orig.get("quantization_config", None) is not None:
kwargs["quantization_config"] = kwargs_orig["quantization_config"]
has_remote_code = hasattr(config, "auto_map") and cls.__name__ in config.auto_map
has_local_code = type(config) in cls._model_mapping.keys()
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
# Set the adapter kwargs
kwargs["adapter_kwargs"] = adapter_kwargs
if has_remote_code and trust_remote_code:
class_ref = config.auto_map[cls.__name__]
model_class = get_class_from_dynamic_module(
class_ref, pretrained_model_name_or_path, code_revision=code_revision, **hub_kwargs, **kwargs
)
_ = hub_kwargs.pop("code_revision", None)
if os.path.isdir(pretrained_model_name_or_path):
model_class.register_for_auto_class(cls.__name__)
else:
cls.register(config.__class__, model_class, exist_ok=True)
return model_class.from_pretrained(
pretrained_model_name_or_path, *model_args, config=config, **hub_kwargs, **kwargs
)
elif type(config) in cls._model_mapping.keys():
model_class = _get_model_class(config, cls._model_mapping)
return model_class.from_pretrained(
pretrained_model_name_or_path, *model_args, config=config, **hub_kwargs, **kwargs
)
raise ValueError(
f"Unrecognized configuration class {config.__class__} for this kind of AutoModel: {cls.__name__}.\n"
f"Model type should be one of {', '.join(c.__name__ for c in cls._model_mapping.keys())}."
)
@classmethod
def register(cls, config_class, model_class, exist_ok=False):
"""
Register a new model for this class.
Args:
config_class ([`PretrainedConfig`]):
The configuration corresponding to the model to register.
model_class ([`PreTrainedModel`]):
The model to register.
"""
if hasattr(model_class, "config_class") and model_class.config_class != config_class:
raise ValueError(
"The model class you are passing has a `config_class` attribute that is not consistent with the "
f"config class you passed (model has {model_class.config_class} and you passed {config_class}. Fix "
"one of those so they match!"
)
cls._model_mapping.register(config_class, model_class, exist_ok=exist_ok)
class _BaseAutoBackboneClass(_BaseAutoModelClass):
# Base class for auto backbone models.
_model_mapping = None
@classmethod
def _load_timm_backbone_from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
requires_backends(cls, ["vision", "timm"])
from ...models.timm_backbone import TimmBackboneConfig
config = kwargs.pop("config", TimmBackboneConfig())
use_timm = kwargs.pop("use_timm_backbone", True)
if not use_timm:
raise ValueError("`use_timm_backbone` must be `True` for timm backbones")
if kwargs.get("out_features", None) is not None:
raise ValueError("Cannot specify `out_features` for timm backbones")
if kwargs.get("output_loading_info", False):
raise ValueError("Cannot specify `output_loading_info=True` when loading from timm")
num_channels = kwargs.pop("num_channels", config.num_channels)
features_only = kwargs.pop("features_only", config.features_only)
use_pretrained_backbone = kwargs.pop("use_pretrained_backbone", config.use_pretrained_backbone)
out_indices = kwargs.pop("out_indices", config.out_indices)
config = TimmBackboneConfig(
backbone=pretrained_model_name_or_path,
num_channels=num_channels,
features_only=features_only,
use_pretrained_backbone=use_pretrained_backbone,
out_indices=out_indices,
)
return super().from_config(config, **kwargs)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
if kwargs.get("use_timm_backbone", False):
return cls._load_timm_backbone_from_pretrained(pretrained_model_name_or_path, *model_args, **kwargs)
return super().from_pretrained(pretrained_model_name_or_path, *model_args, **kwargs)
def insert_head_doc(docstring, head_doc=""):
if len(head_doc) > 0:
return docstring.replace(
"one of the model classes of the library ",
f"one of the model classes of the library (with a {head_doc} head) ",
)
return docstring.replace(
"one of the model classes of the library ", "one of the base model classes of the library "
)
def auto_class_update(cls, checkpoint_for_example="bert-base-cased", head_doc=""):
# Create a new class with the right name from the base class
model_mapping = cls._model_mapping
name = cls.__name__
class_docstring = insert_head_doc(CLASS_DOCSTRING, head_doc=head_doc)
cls.__doc__ = class_docstring.replace("BaseAutoModelClass", name)
# Now we need to copy and re-register `from_config` and `from_pretrained` as class methods otherwise we can't
# have a specific docstrings for them.
from_config = copy_func(_BaseAutoModelClass.from_config)
from_config_docstring = insert_head_doc(FROM_CONFIG_DOCSTRING, head_doc=head_doc)
from_config_docstring = from_config_docstring.replace("BaseAutoModelClass", name)
from_config_docstring = from_config_docstring.replace("checkpoint_placeholder", checkpoint_for_example)
from_config.__doc__ = from_config_docstring
from_config = replace_list_option_in_docstrings(model_mapping._model_mapping, use_model_types=False)(from_config)
cls.from_config = classmethod(from_config)
if name.startswith("TF"):
from_pretrained_docstring = FROM_PRETRAINED_TF_DOCSTRING
elif name.startswith("Flax"):
from_pretrained_docstring = FROM_PRETRAINED_FLAX_DOCSTRING
else:
from_pretrained_docstring = FROM_PRETRAINED_TORCH_DOCSTRING
from_pretrained = copy_func(_BaseAutoModelClass.from_pretrained)
from_pretrained_docstring = insert_head_doc(from_pretrained_docstring, head_doc=head_doc)
from_pretrained_docstring = from_pretrained_docstring.replace("BaseAutoModelClass", name)
from_pretrained_docstring = from_pretrained_docstring.replace("checkpoint_placeholder", checkpoint_for_example)
shortcut = checkpoint_for_example.split("/")[-1].split("-")[0]
from_pretrained_docstring = from_pretrained_docstring.replace("shortcut_placeholder", shortcut)
from_pretrained.__doc__ = from_pretrained_docstring
from_pretrained = replace_list_option_in_docstrings(model_mapping._model_mapping)(from_pretrained)
cls.from_pretrained = classmethod(from_pretrained)
return cls
def get_values(model_mapping):
result = []
for model in model_mapping.values():
if isinstance(model, (list, tuple)):
result += list(model)
else:
result.append(model)
return result
def getattribute_from_module(module, attr):
if attr is None:
return None
if isinstance(attr, tuple):
return tuple(getattribute_from_module(module, a) for a in attr)
if hasattr(module, attr):
return getattr(module, attr)
# Some of the mappings have entries model_type -> object of another model type. In that case we try to grab the
# object at the top level.
transformers_module = importlib.import_module("transformers")
if module != transformers_module:
try:
return getattribute_from_module(transformers_module, attr)
except ValueError:
raise ValueError(f"Could not find {attr} neither in {module} nor in {transformers_module}!")
else:
raise ValueError(f"Could not find {attr} in {transformers_module}!")
class _LazyAutoMapping(OrderedDict):
"""
" A mapping config to object (model or tokenizer for instance) that will load keys and values when it is accessed.
Args:
- config_mapping: The map model type to config class
- model_mapping: The map model type to model (or tokenizer) class
"""
def __init__(self, config_mapping, model_mapping):
self._config_mapping = config_mapping
self._reverse_config_mapping = {v: k for k, v in config_mapping.items()}
self._model_mapping = model_mapping
self._model_mapping._model_mapping = self
self._extra_content = {}
self._modules = {}
def __len__(self):
common_keys = set(self._config_mapping.keys()).intersection(self._model_mapping.keys())
return len(common_keys) + len(self._extra_content)
def __getitem__(self, key):
if key in self._extra_content:
return self._extra_content[key]
model_type = self._reverse_config_mapping[key.__name__]
if model_type in self._model_mapping:
model_name = self._model_mapping[model_type]
return self._load_attr_from_module(model_type, model_name)
# Maybe there was several model types associated with this config.
model_types = [k for k, v in self._config_mapping.items() if v == key.__name__]
for mtype in model_types:
if mtype in self._model_mapping:
model_name = self._model_mapping[mtype]
return self._load_attr_from_module(mtype, model_name)
raise KeyError(key)
def _load_attr_from_module(self, model_type, attr):
module_name = model_type_to_module_name(model_type)
if module_name not in self._modules:
self._modules[module_name] = importlib.import_module(f".{module_name}", "transformers.models")
return getattribute_from_module(self._modules[module_name], attr)
def keys(self):
mapping_keys = [
self._load_attr_from_module(key, name)
for key, name in self._config_mapping.items()
if key in self._model_mapping.keys()
]
return mapping_keys + list(self._extra_content.keys())
def get(self, key, default):
try:
return self.__getitem__(key)
except KeyError:
return default
def __bool__(self):
return bool(self.keys())
def values(self):
mapping_values = [
self._load_attr_from_module(key, name)
for key, name in self._model_mapping.items()
if key in self._config_mapping.keys()
]
return mapping_values + list(self._extra_content.values())
def items(self):
mapping_items = [
(
self._load_attr_from_module(key, self._config_mapping[key]),
self._load_attr_from_module(key, self._model_mapping[key]),
)
for key in self._model_mapping.keys()
if key in self._config_mapping.keys()
]
return mapping_items + list(self._extra_content.items())
def __iter__(self):
return iter(self.keys())
def __contains__(self, item):
if item in self._extra_content:
return True
if not hasattr(item, "__name__") or item.__name__ not in self._reverse_config_mapping:
return False
model_type = self._reverse_config_mapping[item.__name__]
return model_type in self._model_mapping
def register(self, key, value, exist_ok=False):
"""
Register a new model in this mapping.
"""
if hasattr(key, "__name__") and key.__name__ in self._reverse_config_mapping:
model_type = self._reverse_config_mapping[key.__name__]
if model_type in self._model_mapping.keys() and not exist_ok:
raise ValueError(f"'{key}' is already used by a Transformers model.")
self._extra_content[key] = value
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/modeling_flax_auto.py | # coding=utf-8
# Copyright 2018 The Google Flax Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Auto Model class."""
from collections import OrderedDict
from ...utils import logging
from .auto_factory import _BaseAutoModelClass, _LazyAutoMapping, auto_class_update
from .configuration_auto import CONFIG_MAPPING_NAMES
logger = logging.get_logger(__name__)
FLAX_MODEL_MAPPING_NAMES = OrderedDict(
[
# Base model mapping
("albert", "FlaxAlbertModel"),
("bart", "FlaxBartModel"),
("beit", "FlaxBeitModel"),
("bert", "FlaxBertModel"),
("big_bird", "FlaxBigBirdModel"),
("blenderbot", "FlaxBlenderbotModel"),
("blenderbot-small", "FlaxBlenderbotSmallModel"),
("bloom", "FlaxBloomModel"),
("clip", "FlaxCLIPModel"),
("distilbert", "FlaxDistilBertModel"),
("electra", "FlaxElectraModel"),
("gpt-sw3", "FlaxGPT2Model"),
("gpt2", "FlaxGPT2Model"),
("gpt_neo", "FlaxGPTNeoModel"),
("gptj", "FlaxGPTJModel"),
("llama", "FlaxLlamaModel"),
("longt5", "FlaxLongT5Model"),
("marian", "FlaxMarianModel"),
("mbart", "FlaxMBartModel"),
("mt5", "FlaxMT5Model"),
("opt", "FlaxOPTModel"),
("pegasus", "FlaxPegasusModel"),
("regnet", "FlaxRegNetModel"),
("resnet", "FlaxResNetModel"),
("roberta", "FlaxRobertaModel"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormModel"),
("roformer", "FlaxRoFormerModel"),
("t5", "FlaxT5Model"),
("vision-text-dual-encoder", "FlaxVisionTextDualEncoderModel"),
("vit", "FlaxViTModel"),
("wav2vec2", "FlaxWav2Vec2Model"),
("whisper", "FlaxWhisperModel"),
("xglm", "FlaxXGLMModel"),
("xlm-roberta", "FlaxXLMRobertaModel"),
]
)
FLAX_MODEL_FOR_PRETRAINING_MAPPING_NAMES = OrderedDict(
[
# Model for pre-training mapping
("albert", "FlaxAlbertForPreTraining"),
("bart", "FlaxBartForConditionalGeneration"),
("bert", "FlaxBertForPreTraining"),
("big_bird", "FlaxBigBirdForPreTraining"),
("electra", "FlaxElectraForPreTraining"),
("longt5", "FlaxLongT5ForConditionalGeneration"),
("mbart", "FlaxMBartForConditionalGeneration"),
("mt5", "FlaxMT5ForConditionalGeneration"),
("roberta", "FlaxRobertaForMaskedLM"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForMaskedLM"),
("roformer", "FlaxRoFormerForMaskedLM"),
("t5", "FlaxT5ForConditionalGeneration"),
("wav2vec2", "FlaxWav2Vec2ForPreTraining"),
("whisper", "FlaxWhisperForConditionalGeneration"),
("xlm-roberta", "FlaxXLMRobertaForMaskedLM"),
]
)
FLAX_MODEL_FOR_MASKED_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Masked LM mapping
("albert", "FlaxAlbertForMaskedLM"),
("bart", "FlaxBartForConditionalGeneration"),
("bert", "FlaxBertForMaskedLM"),
("big_bird", "FlaxBigBirdForMaskedLM"),
("distilbert", "FlaxDistilBertForMaskedLM"),
("electra", "FlaxElectraForMaskedLM"),
("mbart", "FlaxMBartForConditionalGeneration"),
("roberta", "FlaxRobertaForMaskedLM"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForMaskedLM"),
("roformer", "FlaxRoFormerForMaskedLM"),
("xlm-roberta", "FlaxXLMRobertaForMaskedLM"),
]
)
FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Seq2Seq Causal LM mapping
("bart", "FlaxBartForConditionalGeneration"),
("blenderbot", "FlaxBlenderbotForConditionalGeneration"),
("blenderbot-small", "FlaxBlenderbotSmallForConditionalGeneration"),
("encoder-decoder", "FlaxEncoderDecoderModel"),
("longt5", "FlaxLongT5ForConditionalGeneration"),
("marian", "FlaxMarianMTModel"),
("mbart", "FlaxMBartForConditionalGeneration"),
("mt5", "FlaxMT5ForConditionalGeneration"),
("pegasus", "FlaxPegasusForConditionalGeneration"),
("t5", "FlaxT5ForConditionalGeneration"),
]
)
FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Image-classsification
("beit", "FlaxBeitForImageClassification"),
("regnet", "FlaxRegNetForImageClassification"),
("resnet", "FlaxResNetForImageClassification"),
("vit", "FlaxViTForImageClassification"),
]
)
FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("vision-encoder-decoder", "FlaxVisionEncoderDecoderModel"),
]
)
FLAX_MODEL_FOR_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Causal LM mapping
("bart", "FlaxBartForCausalLM"),
("bert", "FlaxBertForCausalLM"),
("big_bird", "FlaxBigBirdForCausalLM"),
("bloom", "FlaxBloomForCausalLM"),
("electra", "FlaxElectraForCausalLM"),
("gpt-sw3", "FlaxGPT2LMHeadModel"),
("gpt2", "FlaxGPT2LMHeadModel"),
("gpt_neo", "FlaxGPTNeoForCausalLM"),
("gptj", "FlaxGPTJForCausalLM"),
("llama", "FlaxLlamaForCausalLM"),
("opt", "FlaxOPTForCausalLM"),
("roberta", "FlaxRobertaForCausalLM"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForCausalLM"),
("xglm", "FlaxXGLMForCausalLM"),
("xlm-roberta", "FlaxXLMRobertaForCausalLM"),
]
)
FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Sequence Classification mapping
("albert", "FlaxAlbertForSequenceClassification"),
("bart", "FlaxBartForSequenceClassification"),
("bert", "FlaxBertForSequenceClassification"),
("big_bird", "FlaxBigBirdForSequenceClassification"),
("distilbert", "FlaxDistilBertForSequenceClassification"),
("electra", "FlaxElectraForSequenceClassification"),
("mbart", "FlaxMBartForSequenceClassification"),
("roberta", "FlaxRobertaForSequenceClassification"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForSequenceClassification"),
("roformer", "FlaxRoFormerForSequenceClassification"),
("xlm-roberta", "FlaxXLMRobertaForSequenceClassification"),
]
)
FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
# Model for Question Answering mapping
("albert", "FlaxAlbertForQuestionAnswering"),
("bart", "FlaxBartForQuestionAnswering"),
("bert", "FlaxBertForQuestionAnswering"),
("big_bird", "FlaxBigBirdForQuestionAnswering"),
("distilbert", "FlaxDistilBertForQuestionAnswering"),
("electra", "FlaxElectraForQuestionAnswering"),
("mbart", "FlaxMBartForQuestionAnswering"),
("roberta", "FlaxRobertaForQuestionAnswering"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForQuestionAnswering"),
("roformer", "FlaxRoFormerForQuestionAnswering"),
("xlm-roberta", "FlaxXLMRobertaForQuestionAnswering"),
]
)
FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Token Classification mapping
("albert", "FlaxAlbertForTokenClassification"),
("bert", "FlaxBertForTokenClassification"),
("big_bird", "FlaxBigBirdForTokenClassification"),
("distilbert", "FlaxDistilBertForTokenClassification"),
("electra", "FlaxElectraForTokenClassification"),
("roberta", "FlaxRobertaForTokenClassification"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForTokenClassification"),
("roformer", "FlaxRoFormerForTokenClassification"),
("xlm-roberta", "FlaxXLMRobertaForTokenClassification"),
]
)
FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES = OrderedDict(
[
# Model for Multiple Choice mapping
("albert", "FlaxAlbertForMultipleChoice"),
("bert", "FlaxBertForMultipleChoice"),
("big_bird", "FlaxBigBirdForMultipleChoice"),
("distilbert", "FlaxDistilBertForMultipleChoice"),
("electra", "FlaxElectraForMultipleChoice"),
("roberta", "FlaxRobertaForMultipleChoice"),
("roberta-prelayernorm", "FlaxRobertaPreLayerNormForMultipleChoice"),
("roformer", "FlaxRoFormerForMultipleChoice"),
("xlm-roberta", "FlaxXLMRobertaForMultipleChoice"),
]
)
FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES = OrderedDict(
[
("bert", "FlaxBertForNextSentencePrediction"),
]
)
FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("speech-encoder-decoder", "FlaxSpeechEncoderDecoderModel"),
("whisper", "FlaxWhisperForConditionalGeneration"),
]
)
FLAX_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
("whisper", "FlaxWhisperForAudioClassification"),
]
)
FLAX_MODEL_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FLAX_MODEL_MAPPING_NAMES)
FLAX_MODEL_FOR_PRETRAINING_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_PRETRAINING_MAPPING_NAMES)
FLAX_MODEL_FOR_MASKED_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_MASKED_LM_MAPPING_NAMES)
FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES
)
FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES
)
FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES)
FLAX_MODEL_FOR_CAUSAL_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_CAUSAL_LM_MAPPING_NAMES)
FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES
)
FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
)
FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES
)
FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES
)
FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES
)
FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES
)
FLAX_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, FLAX_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES
)
class FlaxAutoModel(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_MAPPING
FlaxAutoModel = auto_class_update(FlaxAutoModel)
class FlaxAutoModelForPreTraining(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_PRETRAINING_MAPPING
FlaxAutoModelForPreTraining = auto_class_update(FlaxAutoModelForPreTraining, head_doc="pretraining")
class FlaxAutoModelForCausalLM(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_CAUSAL_LM_MAPPING
FlaxAutoModelForCausalLM = auto_class_update(FlaxAutoModelForCausalLM, head_doc="causal language modeling")
class FlaxAutoModelForMaskedLM(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_MASKED_LM_MAPPING
FlaxAutoModelForMaskedLM = auto_class_update(FlaxAutoModelForMaskedLM, head_doc="masked language modeling")
class FlaxAutoModelForSeq2SeqLM(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING
FlaxAutoModelForSeq2SeqLM = auto_class_update(
FlaxAutoModelForSeq2SeqLM, head_doc="sequence-to-sequence language modeling", checkpoint_for_example="t5-base"
)
class FlaxAutoModelForSequenceClassification(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING
FlaxAutoModelForSequenceClassification = auto_class_update(
FlaxAutoModelForSequenceClassification, head_doc="sequence classification"
)
class FlaxAutoModelForQuestionAnswering(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING
FlaxAutoModelForQuestionAnswering = auto_class_update(FlaxAutoModelForQuestionAnswering, head_doc="question answering")
class FlaxAutoModelForTokenClassification(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING
FlaxAutoModelForTokenClassification = auto_class_update(
FlaxAutoModelForTokenClassification, head_doc="token classification"
)
class FlaxAutoModelForMultipleChoice(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING
FlaxAutoModelForMultipleChoice = auto_class_update(FlaxAutoModelForMultipleChoice, head_doc="multiple choice")
class FlaxAutoModelForNextSentencePrediction(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING
FlaxAutoModelForNextSentencePrediction = auto_class_update(
FlaxAutoModelForNextSentencePrediction, head_doc="next sentence prediction"
)
class FlaxAutoModelForImageClassification(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING
FlaxAutoModelForImageClassification = auto_class_update(
FlaxAutoModelForImageClassification, head_doc="image classification"
)
class FlaxAutoModelForVision2Seq(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING
FlaxAutoModelForVision2Seq = auto_class_update(FlaxAutoModelForVision2Seq, head_doc="vision-to-text modeling")
class FlaxAutoModelForSpeechSeq2Seq(_BaseAutoModelClass):
_model_mapping = FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING
FlaxAutoModelForSpeechSeq2Seq = auto_class_update(
FlaxAutoModelForSpeechSeq2Seq, head_doc="sequence-to-sequence speech-to-text modeling"
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/modeling_tf_auto.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Auto Model class."""
import warnings
from collections import OrderedDict
from ...utils import logging
from .auto_factory import _BaseAutoModelClass, _LazyAutoMapping, auto_class_update
from .configuration_auto import CONFIG_MAPPING_NAMES
logger = logging.get_logger(__name__)
TF_MODEL_MAPPING_NAMES = OrderedDict(
[
# Base model mapping
("albert", "TFAlbertModel"),
("bart", "TFBartModel"),
("bert", "TFBertModel"),
("blenderbot", "TFBlenderbotModel"),
("blenderbot-small", "TFBlenderbotSmallModel"),
("blip", "TFBlipModel"),
("camembert", "TFCamembertModel"),
("clip", "TFCLIPModel"),
("convbert", "TFConvBertModel"),
("convnext", "TFConvNextModel"),
("convnextv2", "TFConvNextV2Model"),
("ctrl", "TFCTRLModel"),
("cvt", "TFCvtModel"),
("data2vec-vision", "TFData2VecVisionModel"),
("deberta", "TFDebertaModel"),
("deberta-v2", "TFDebertaV2Model"),
("deit", "TFDeiTModel"),
("distilbert", "TFDistilBertModel"),
("dpr", "TFDPRQuestionEncoder"),
("efficientformer", "TFEfficientFormerModel"),
("electra", "TFElectraModel"),
("esm", "TFEsmModel"),
("flaubert", "TFFlaubertModel"),
("funnel", ("TFFunnelModel", "TFFunnelBaseModel")),
("gpt-sw3", "TFGPT2Model"),
("gpt2", "TFGPT2Model"),
("gptj", "TFGPTJModel"),
("groupvit", "TFGroupViTModel"),
("hubert", "TFHubertModel"),
("layoutlm", "TFLayoutLMModel"),
("layoutlmv3", "TFLayoutLMv3Model"),
("led", "TFLEDModel"),
("longformer", "TFLongformerModel"),
("lxmert", "TFLxmertModel"),
("marian", "TFMarianModel"),
("mbart", "TFMBartModel"),
("mobilebert", "TFMobileBertModel"),
("mobilevit", "TFMobileViTModel"),
("mpnet", "TFMPNetModel"),
("mt5", "TFMT5Model"),
("openai-gpt", "TFOpenAIGPTModel"),
("opt", "TFOPTModel"),
("pegasus", "TFPegasusModel"),
("regnet", "TFRegNetModel"),
("rembert", "TFRemBertModel"),
("resnet", "TFResNetModel"),
("roberta", "TFRobertaModel"),
("roberta-prelayernorm", "TFRobertaPreLayerNormModel"),
("roformer", "TFRoFormerModel"),
("sam", "TFSamModel"),
("segformer", "TFSegformerModel"),
("speech_to_text", "TFSpeech2TextModel"),
("swin", "TFSwinModel"),
("t5", "TFT5Model"),
("tapas", "TFTapasModel"),
("transfo-xl", "TFTransfoXLModel"),
("vision-text-dual-encoder", "TFVisionTextDualEncoderModel"),
("vit", "TFViTModel"),
("vit_mae", "TFViTMAEModel"),
("wav2vec2", "TFWav2Vec2Model"),
("whisper", "TFWhisperModel"),
("xglm", "TFXGLMModel"),
("xlm", "TFXLMModel"),
("xlm-roberta", "TFXLMRobertaModel"),
("xlnet", "TFXLNetModel"),
]
)
TF_MODEL_FOR_PRETRAINING_MAPPING_NAMES = OrderedDict(
[
# Model for pre-training mapping
("albert", "TFAlbertForPreTraining"),
("bart", "TFBartForConditionalGeneration"),
("bert", "TFBertForPreTraining"),
("camembert", "TFCamembertForMaskedLM"),
("ctrl", "TFCTRLLMHeadModel"),
("distilbert", "TFDistilBertForMaskedLM"),
("electra", "TFElectraForPreTraining"),
("flaubert", "TFFlaubertWithLMHeadModel"),
("funnel", "TFFunnelForPreTraining"),
("gpt-sw3", "TFGPT2LMHeadModel"),
("gpt2", "TFGPT2LMHeadModel"),
("layoutlm", "TFLayoutLMForMaskedLM"),
("lxmert", "TFLxmertForPreTraining"),
("mobilebert", "TFMobileBertForPreTraining"),
("mpnet", "TFMPNetForMaskedLM"),
("openai-gpt", "TFOpenAIGPTLMHeadModel"),
("roberta", "TFRobertaForMaskedLM"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForMaskedLM"),
("t5", "TFT5ForConditionalGeneration"),
("tapas", "TFTapasForMaskedLM"),
("transfo-xl", "TFTransfoXLLMHeadModel"),
("vit_mae", "TFViTMAEForPreTraining"),
("xlm", "TFXLMWithLMHeadModel"),
("xlm-roberta", "TFXLMRobertaForMaskedLM"),
("xlnet", "TFXLNetLMHeadModel"),
]
)
TF_MODEL_WITH_LM_HEAD_MAPPING_NAMES = OrderedDict(
[
# Model with LM heads mapping
("albert", "TFAlbertForMaskedLM"),
("bart", "TFBartForConditionalGeneration"),
("bert", "TFBertForMaskedLM"),
("camembert", "TFCamembertForMaskedLM"),
("convbert", "TFConvBertForMaskedLM"),
("ctrl", "TFCTRLLMHeadModel"),
("distilbert", "TFDistilBertForMaskedLM"),
("electra", "TFElectraForMaskedLM"),
("esm", "TFEsmForMaskedLM"),
("flaubert", "TFFlaubertWithLMHeadModel"),
("funnel", "TFFunnelForMaskedLM"),
("gpt-sw3", "TFGPT2LMHeadModel"),
("gpt2", "TFGPT2LMHeadModel"),
("gptj", "TFGPTJForCausalLM"),
("layoutlm", "TFLayoutLMForMaskedLM"),
("led", "TFLEDForConditionalGeneration"),
("longformer", "TFLongformerForMaskedLM"),
("marian", "TFMarianMTModel"),
("mobilebert", "TFMobileBertForMaskedLM"),
("mpnet", "TFMPNetForMaskedLM"),
("openai-gpt", "TFOpenAIGPTLMHeadModel"),
("rembert", "TFRemBertForMaskedLM"),
("roberta", "TFRobertaForMaskedLM"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForMaskedLM"),
("roformer", "TFRoFormerForMaskedLM"),
("speech_to_text", "TFSpeech2TextForConditionalGeneration"),
("t5", "TFT5ForConditionalGeneration"),
("tapas", "TFTapasForMaskedLM"),
("transfo-xl", "TFTransfoXLLMHeadModel"),
("whisper", "TFWhisperForConditionalGeneration"),
("xlm", "TFXLMWithLMHeadModel"),
("xlm-roberta", "TFXLMRobertaForMaskedLM"),
("xlnet", "TFXLNetLMHeadModel"),
]
)
TF_MODEL_FOR_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Causal LM mapping
("bert", "TFBertLMHeadModel"),
("camembert", "TFCamembertForCausalLM"),
("ctrl", "TFCTRLLMHeadModel"),
("gpt-sw3", "TFGPT2LMHeadModel"),
("gpt2", "TFGPT2LMHeadModel"),
("gptj", "TFGPTJForCausalLM"),
("openai-gpt", "TFOpenAIGPTLMHeadModel"),
("opt", "TFOPTForCausalLM"),
("rembert", "TFRemBertForCausalLM"),
("roberta", "TFRobertaForCausalLM"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForCausalLM"),
("roformer", "TFRoFormerForCausalLM"),
("transfo-xl", "TFTransfoXLLMHeadModel"),
("xglm", "TFXGLMForCausalLM"),
("xlm", "TFXLMWithLMHeadModel"),
("xlm-roberta", "TFXLMRobertaForCausalLM"),
("xlnet", "TFXLNetLMHeadModel"),
]
)
TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING_NAMES = OrderedDict(
[
("deit", "TFDeiTForMaskedImageModeling"),
("swin", "TFSwinForMaskedImageModeling"),
]
)
TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Image-classsification
("convnext", "TFConvNextForImageClassification"),
("convnextv2", "TFConvNextV2ForImageClassification"),
("cvt", "TFCvtForImageClassification"),
("data2vec-vision", "TFData2VecVisionForImageClassification"),
("deit", ("TFDeiTForImageClassification", "TFDeiTForImageClassificationWithTeacher")),
(
"efficientformer",
("TFEfficientFormerForImageClassification", "TFEfficientFormerForImageClassificationWithTeacher"),
),
("mobilevit", "TFMobileViTForImageClassification"),
("regnet", "TFRegNetForImageClassification"),
("resnet", "TFResNetForImageClassification"),
("segformer", "TFSegformerForImageClassification"),
("swin", "TFSwinForImageClassification"),
("vit", "TFViTForImageClassification"),
]
)
TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Zero Shot Image Classification mapping
("blip", "TFBlipModel"),
("clip", "TFCLIPModel"),
]
)
TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING_NAMES = OrderedDict(
[
# Model for Semantic Segmentation mapping
("data2vec-vision", "TFData2VecVisionForSemanticSegmentation"),
("mobilevit", "TFMobileViTForSemanticSegmentation"),
("segformer", "TFSegformerForSemanticSegmentation"),
]
)
TF_MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("blip", "TFBlipForConditionalGeneration"),
("vision-encoder-decoder", "TFVisionEncoderDecoderModel"),
]
)
TF_MODEL_FOR_MASKED_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Masked LM mapping
("albert", "TFAlbertForMaskedLM"),
("bert", "TFBertForMaskedLM"),
("camembert", "TFCamembertForMaskedLM"),
("convbert", "TFConvBertForMaskedLM"),
("deberta", "TFDebertaForMaskedLM"),
("deberta-v2", "TFDebertaV2ForMaskedLM"),
("distilbert", "TFDistilBertForMaskedLM"),
("electra", "TFElectraForMaskedLM"),
("esm", "TFEsmForMaskedLM"),
("flaubert", "TFFlaubertWithLMHeadModel"),
("funnel", "TFFunnelForMaskedLM"),
("layoutlm", "TFLayoutLMForMaskedLM"),
("longformer", "TFLongformerForMaskedLM"),
("mobilebert", "TFMobileBertForMaskedLM"),
("mpnet", "TFMPNetForMaskedLM"),
("rembert", "TFRemBertForMaskedLM"),
("roberta", "TFRobertaForMaskedLM"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForMaskedLM"),
("roformer", "TFRoFormerForMaskedLM"),
("tapas", "TFTapasForMaskedLM"),
("xlm", "TFXLMWithLMHeadModel"),
("xlm-roberta", "TFXLMRobertaForMaskedLM"),
]
)
TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Seq2Seq Causal LM mapping
("bart", "TFBartForConditionalGeneration"),
("blenderbot", "TFBlenderbotForConditionalGeneration"),
("blenderbot-small", "TFBlenderbotSmallForConditionalGeneration"),
("encoder-decoder", "TFEncoderDecoderModel"),
("led", "TFLEDForConditionalGeneration"),
("marian", "TFMarianMTModel"),
("mbart", "TFMBartForConditionalGeneration"),
("mt5", "TFMT5ForConditionalGeneration"),
("pegasus", "TFPegasusForConditionalGeneration"),
("t5", "TFT5ForConditionalGeneration"),
]
)
TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("speech_to_text", "TFSpeech2TextForConditionalGeneration"),
("whisper", "TFWhisperForConditionalGeneration"),
]
)
TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Sequence Classification mapping
("albert", "TFAlbertForSequenceClassification"),
("bart", "TFBartForSequenceClassification"),
("bert", "TFBertForSequenceClassification"),
("camembert", "TFCamembertForSequenceClassification"),
("convbert", "TFConvBertForSequenceClassification"),
("ctrl", "TFCTRLForSequenceClassification"),
("deberta", "TFDebertaForSequenceClassification"),
("deberta-v2", "TFDebertaV2ForSequenceClassification"),
("distilbert", "TFDistilBertForSequenceClassification"),
("electra", "TFElectraForSequenceClassification"),
("esm", "TFEsmForSequenceClassification"),
("flaubert", "TFFlaubertForSequenceClassification"),
("funnel", "TFFunnelForSequenceClassification"),
("gpt-sw3", "TFGPT2ForSequenceClassification"),
("gpt2", "TFGPT2ForSequenceClassification"),
("gptj", "TFGPTJForSequenceClassification"),
("layoutlm", "TFLayoutLMForSequenceClassification"),
("layoutlmv3", "TFLayoutLMv3ForSequenceClassification"),
("longformer", "TFLongformerForSequenceClassification"),
("mobilebert", "TFMobileBertForSequenceClassification"),
("mpnet", "TFMPNetForSequenceClassification"),
("openai-gpt", "TFOpenAIGPTForSequenceClassification"),
("rembert", "TFRemBertForSequenceClassification"),
("roberta", "TFRobertaForSequenceClassification"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForSequenceClassification"),
("roformer", "TFRoFormerForSequenceClassification"),
("tapas", "TFTapasForSequenceClassification"),
("transfo-xl", "TFTransfoXLForSequenceClassification"),
("xlm", "TFXLMForSequenceClassification"),
("xlm-roberta", "TFXLMRobertaForSequenceClassification"),
("xlnet", "TFXLNetForSequenceClassification"),
]
)
TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
# Model for Question Answering mapping
("albert", "TFAlbertForQuestionAnswering"),
("bert", "TFBertForQuestionAnswering"),
("camembert", "TFCamembertForQuestionAnswering"),
("convbert", "TFConvBertForQuestionAnswering"),
("deberta", "TFDebertaForQuestionAnswering"),
("deberta-v2", "TFDebertaV2ForQuestionAnswering"),
("distilbert", "TFDistilBertForQuestionAnswering"),
("electra", "TFElectraForQuestionAnswering"),
("flaubert", "TFFlaubertForQuestionAnsweringSimple"),
("funnel", "TFFunnelForQuestionAnswering"),
("gptj", "TFGPTJForQuestionAnswering"),
("layoutlmv3", "TFLayoutLMv3ForQuestionAnswering"),
("longformer", "TFLongformerForQuestionAnswering"),
("mobilebert", "TFMobileBertForQuestionAnswering"),
("mpnet", "TFMPNetForQuestionAnswering"),
("rembert", "TFRemBertForQuestionAnswering"),
("roberta", "TFRobertaForQuestionAnswering"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForQuestionAnswering"),
("roformer", "TFRoFormerForQuestionAnswering"),
("xlm", "TFXLMForQuestionAnsweringSimple"),
("xlm-roberta", "TFXLMRobertaForQuestionAnswering"),
("xlnet", "TFXLNetForQuestionAnsweringSimple"),
]
)
TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES = OrderedDict([("wav2vec2", "TFWav2Vec2ForSequenceClassification")])
TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
("layoutlm", "TFLayoutLMForQuestionAnswering"),
("layoutlmv3", "TFLayoutLMv3ForQuestionAnswering"),
]
)
TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
# Model for Table Question Answering mapping
("tapas", "TFTapasForQuestionAnswering"),
]
)
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Token Classification mapping
("albert", "TFAlbertForTokenClassification"),
("bert", "TFBertForTokenClassification"),
("camembert", "TFCamembertForTokenClassification"),
("convbert", "TFConvBertForTokenClassification"),
("deberta", "TFDebertaForTokenClassification"),
("deberta-v2", "TFDebertaV2ForTokenClassification"),
("distilbert", "TFDistilBertForTokenClassification"),
("electra", "TFElectraForTokenClassification"),
("esm", "TFEsmForTokenClassification"),
("flaubert", "TFFlaubertForTokenClassification"),
("funnel", "TFFunnelForTokenClassification"),
("layoutlm", "TFLayoutLMForTokenClassification"),
("layoutlmv3", "TFLayoutLMv3ForTokenClassification"),
("longformer", "TFLongformerForTokenClassification"),
("mobilebert", "TFMobileBertForTokenClassification"),
("mpnet", "TFMPNetForTokenClassification"),
("rembert", "TFRemBertForTokenClassification"),
("roberta", "TFRobertaForTokenClassification"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForTokenClassification"),
("roformer", "TFRoFormerForTokenClassification"),
("xlm", "TFXLMForTokenClassification"),
("xlm-roberta", "TFXLMRobertaForTokenClassification"),
("xlnet", "TFXLNetForTokenClassification"),
]
)
TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES = OrderedDict(
[
# Model for Multiple Choice mapping
("albert", "TFAlbertForMultipleChoice"),
("bert", "TFBertForMultipleChoice"),
("camembert", "TFCamembertForMultipleChoice"),
("convbert", "TFConvBertForMultipleChoice"),
("deberta-v2", "TFDebertaV2ForMultipleChoice"),
("distilbert", "TFDistilBertForMultipleChoice"),
("electra", "TFElectraForMultipleChoice"),
("flaubert", "TFFlaubertForMultipleChoice"),
("funnel", "TFFunnelForMultipleChoice"),
("longformer", "TFLongformerForMultipleChoice"),
("mobilebert", "TFMobileBertForMultipleChoice"),
("mpnet", "TFMPNetForMultipleChoice"),
("rembert", "TFRemBertForMultipleChoice"),
("roberta", "TFRobertaForMultipleChoice"),
("roberta-prelayernorm", "TFRobertaPreLayerNormForMultipleChoice"),
("roformer", "TFRoFormerForMultipleChoice"),
("xlm", "TFXLMForMultipleChoice"),
("xlm-roberta", "TFXLMRobertaForMultipleChoice"),
("xlnet", "TFXLNetForMultipleChoice"),
]
)
TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES = OrderedDict(
[
("bert", "TFBertForNextSentencePrediction"),
("mobilebert", "TFMobileBertForNextSentencePrediction"),
]
)
TF_MODEL_FOR_MASK_GENERATION_MAPPING_NAMES = OrderedDict(
[
("sam", "TFSamModel"),
]
)
TF_MODEL_FOR_TEXT_ENCODING_MAPPING_NAMES = OrderedDict(
[
("albert", "TFAlbertModel"),
("bert", "TFBertModel"),
("convbert", "TFConvBertModel"),
("deberta", "TFDebertaModel"),
("deberta-v2", "TFDebertaV2Model"),
("distilbert", "TFDistilBertModel"),
("electra", "TFElectraModel"),
("flaubert", "TFFlaubertModel"),
("longformer", "TFLongformerModel"),
("mobilebert", "TFMobileBertModel"),
("mt5", "TFMT5EncoderModel"),
("rembert", "TFRemBertModel"),
("roberta", "TFRobertaModel"),
("roberta-prelayernorm", "TFRobertaPreLayerNormModel"),
("roformer", "TFRoFormerModel"),
("t5", "TFT5EncoderModel"),
("xlm", "TFXLMModel"),
("xlm-roberta", "TFXLMRobertaModel"),
]
)
TF_MODEL_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_MAPPING_NAMES)
TF_MODEL_FOR_PRETRAINING_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_FOR_PRETRAINING_MAPPING_NAMES)
TF_MODEL_WITH_LM_HEAD_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_WITH_LM_HEAD_MAPPING_NAMES)
TF_MODEL_FOR_CAUSAL_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_FOR_CAUSAL_LM_MAPPING_NAMES)
TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING_NAMES
)
TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES
)
TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING_NAMES
)
TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING_NAMES
)
TF_MODEL_FOR_VISION_2_SEQ_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES)
TF_MODEL_FOR_MASKED_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_FOR_MASKED_LM_MAPPING_NAMES)
TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES
)
TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES
)
TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES
)
TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
)
TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING_NAMES
)
TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING_NAMES
)
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES
)
TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES
)
TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES
)
TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES
)
TF_MODEL_FOR_MASK_GENERATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, TF_MODEL_FOR_MASK_GENERATION_MAPPING_NAMES
)
TF_MODEL_FOR_TEXT_ENCODING_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TF_MODEL_FOR_TEXT_ENCODING_MAPPING_NAMES)
class TFAutoModelForMaskGeneration(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_MASK_GENERATION_MAPPING
class TFAutoModelForTextEncoding(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_TEXT_ENCODING_MAPPING
class TFAutoModel(_BaseAutoModelClass):
_model_mapping = TF_MODEL_MAPPING
TFAutoModel = auto_class_update(TFAutoModel)
class TFAutoModelForAudioClassification(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING
TFAutoModelForAudioClassification = auto_class_update(
TFAutoModelForAudioClassification, head_doc="audio classification"
)
class TFAutoModelForPreTraining(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_PRETRAINING_MAPPING
TFAutoModelForPreTraining = auto_class_update(TFAutoModelForPreTraining, head_doc="pretraining")
# Private on purpose, the public class will add the deprecation warnings.
class _TFAutoModelWithLMHead(_BaseAutoModelClass):
_model_mapping = TF_MODEL_WITH_LM_HEAD_MAPPING
_TFAutoModelWithLMHead = auto_class_update(_TFAutoModelWithLMHead, head_doc="language modeling")
class TFAutoModelForCausalLM(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_CAUSAL_LM_MAPPING
TFAutoModelForCausalLM = auto_class_update(TFAutoModelForCausalLM, head_doc="causal language modeling")
class TFAutoModelForMaskedImageModeling(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING
TFAutoModelForMaskedImageModeling = auto_class_update(
TFAutoModelForMaskedImageModeling, head_doc="masked image modeling"
)
class TFAutoModelForImageClassification(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING
TFAutoModelForImageClassification = auto_class_update(
TFAutoModelForImageClassification, head_doc="image classification"
)
class TFAutoModelForZeroShotImageClassification(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING
TFAutoModelForZeroShotImageClassification = auto_class_update(
TFAutoModelForZeroShotImageClassification, head_doc="zero-shot image classification"
)
class TFAutoModelForSemanticSegmentation(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING
TFAutoModelForSemanticSegmentation = auto_class_update(
TFAutoModelForSemanticSegmentation, head_doc="semantic segmentation"
)
class TFAutoModelForVision2Seq(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_VISION_2_SEQ_MAPPING
TFAutoModelForVision2Seq = auto_class_update(TFAutoModelForVision2Seq, head_doc="vision-to-text modeling")
class TFAutoModelForMaskedLM(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_MASKED_LM_MAPPING
TFAutoModelForMaskedLM = auto_class_update(TFAutoModelForMaskedLM, head_doc="masked language modeling")
class TFAutoModelForSeq2SeqLM(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING
TFAutoModelForSeq2SeqLM = auto_class_update(
TFAutoModelForSeq2SeqLM, head_doc="sequence-to-sequence language modeling", checkpoint_for_example="t5-base"
)
class TFAutoModelForSequenceClassification(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING
TFAutoModelForSequenceClassification = auto_class_update(
TFAutoModelForSequenceClassification, head_doc="sequence classification"
)
class TFAutoModelForQuestionAnswering(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING
TFAutoModelForQuestionAnswering = auto_class_update(TFAutoModelForQuestionAnswering, head_doc="question answering")
class TFAutoModelForDocumentQuestionAnswering(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING
TFAutoModelForDocumentQuestionAnswering = auto_class_update(
TFAutoModelForDocumentQuestionAnswering,
head_doc="document question answering",
checkpoint_for_example='impira/layoutlm-document-qa", revision="52e01b3',
)
class TFAutoModelForTableQuestionAnswering(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING
TFAutoModelForTableQuestionAnswering = auto_class_update(
TFAutoModelForTableQuestionAnswering,
head_doc="table question answering",
checkpoint_for_example="google/tapas-base-finetuned-wtq",
)
class TFAutoModelForTokenClassification(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING
TFAutoModelForTokenClassification = auto_class_update(
TFAutoModelForTokenClassification, head_doc="token classification"
)
class TFAutoModelForMultipleChoice(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING
TFAutoModelForMultipleChoice = auto_class_update(TFAutoModelForMultipleChoice, head_doc="multiple choice")
class TFAutoModelForNextSentencePrediction(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING
TFAutoModelForNextSentencePrediction = auto_class_update(
TFAutoModelForNextSentencePrediction, head_doc="next sentence prediction"
)
class TFAutoModelForSpeechSeq2Seq(_BaseAutoModelClass):
_model_mapping = TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING
TFAutoModelForSpeechSeq2Seq = auto_class_update(
TFAutoModelForSpeechSeq2Seq, head_doc="sequence-to-sequence speech-to-text modeling"
)
class TFAutoModelWithLMHead(_TFAutoModelWithLMHead):
@classmethod
def from_config(cls, config):
warnings.warn(
"The class `TFAutoModelWithLMHead` is deprecated and will be removed in a future version. Please use"
" `TFAutoModelForCausalLM` for causal language models, `TFAutoModelForMaskedLM` for masked language models"
" and `TFAutoModelForSeq2SeqLM` for encoder-decoder models.",
FutureWarning,
)
return super().from_config(config)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
warnings.warn(
"The class `TFAutoModelWithLMHead` is deprecated and will be removed in a future version. Please use"
" `TFAutoModelForCausalLM` for causal language models, `TFAutoModelForMaskedLM` for masked language models"
" and `TFAutoModelForSeq2SeqLM` for encoder-decoder models.",
FutureWarning,
)
return super().from_pretrained(pretrained_model_name_or_path, *model_args, **kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/configuration_auto.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Auto Config class."""
import importlib
import os
import re
import warnings
from collections import OrderedDict
from typing import List, Union
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...utils import CONFIG_NAME, logging
logger = logging.get_logger(__name__)
CONFIG_MAPPING_NAMES = OrderedDict(
[
# Add configs here
("albert", "AlbertConfig"),
("align", "AlignConfig"),
("altclip", "AltCLIPConfig"),
("audio-spectrogram-transformer", "ASTConfig"),
("autoformer", "AutoformerConfig"),
("bark", "BarkConfig"),
("bart", "BartConfig"),
("beit", "BeitConfig"),
("bert", "BertConfig"),
("bert-generation", "BertGenerationConfig"),
("big_bird", "BigBirdConfig"),
("bigbird_pegasus", "BigBirdPegasusConfig"),
("biogpt", "BioGptConfig"),
("bit", "BitConfig"),
("blenderbot", "BlenderbotConfig"),
("blenderbot-small", "BlenderbotSmallConfig"),
("blip", "BlipConfig"),
("blip-2", "Blip2Config"),
("bloom", "BloomConfig"),
("bridgetower", "BridgeTowerConfig"),
("bros", "BrosConfig"),
("camembert", "CamembertConfig"),
("canine", "CanineConfig"),
("chinese_clip", "ChineseCLIPConfig"),
("clap", "ClapConfig"),
("clip", "CLIPConfig"),
("clip_vision_model", "CLIPVisionConfig"),
("clipseg", "CLIPSegConfig"),
("clvp", "ClvpConfig"),
("code_llama", "LlamaConfig"),
("codegen", "CodeGenConfig"),
("conditional_detr", "ConditionalDetrConfig"),
("convbert", "ConvBertConfig"),
("convnext", "ConvNextConfig"),
("convnextv2", "ConvNextV2Config"),
("cpmant", "CpmAntConfig"),
("ctrl", "CTRLConfig"),
("cvt", "CvtConfig"),
("data2vec-audio", "Data2VecAudioConfig"),
("data2vec-text", "Data2VecTextConfig"),
("data2vec-vision", "Data2VecVisionConfig"),
("deberta", "DebertaConfig"),
("deberta-v2", "DebertaV2Config"),
("decision_transformer", "DecisionTransformerConfig"),
("deformable_detr", "DeformableDetrConfig"),
("deit", "DeiTConfig"),
("deta", "DetaConfig"),
("detr", "DetrConfig"),
("dinat", "DinatConfig"),
("dinov2", "Dinov2Config"),
("distilbert", "DistilBertConfig"),
("donut-swin", "DonutSwinConfig"),
("dpr", "DPRConfig"),
("dpt", "DPTConfig"),
("efficientformer", "EfficientFormerConfig"),
("efficientnet", "EfficientNetConfig"),
("electra", "ElectraConfig"),
("encodec", "EncodecConfig"),
("encoder-decoder", "EncoderDecoderConfig"),
("ernie", "ErnieConfig"),
("ernie_m", "ErnieMConfig"),
("esm", "EsmConfig"),
("falcon", "FalconConfig"),
("flaubert", "FlaubertConfig"),
("flava", "FlavaConfig"),
("fnet", "FNetConfig"),
("focalnet", "FocalNetConfig"),
("fsmt", "FSMTConfig"),
("funnel", "FunnelConfig"),
("fuyu", "FuyuConfig"),
("git", "GitConfig"),
("glpn", "GLPNConfig"),
("gpt-sw3", "GPT2Config"),
("gpt2", "GPT2Config"),
("gpt_bigcode", "GPTBigCodeConfig"),
("gpt_neo", "GPTNeoConfig"),
("gpt_neox", "GPTNeoXConfig"),
("gpt_neox_japanese", "GPTNeoXJapaneseConfig"),
("gptj", "GPTJConfig"),
("gptsan-japanese", "GPTSanJapaneseConfig"),
("graphormer", "GraphormerConfig"),
("groupvit", "GroupViTConfig"),
("hubert", "HubertConfig"),
("ibert", "IBertConfig"),
("idefics", "IdeficsConfig"),
("imagegpt", "ImageGPTConfig"),
("informer", "InformerConfig"),
("instructblip", "InstructBlipConfig"),
("jukebox", "JukeboxConfig"),
("kosmos-2", "Kosmos2Config"),
("layoutlm", "LayoutLMConfig"),
("layoutlmv2", "LayoutLMv2Config"),
("layoutlmv3", "LayoutLMv3Config"),
("led", "LEDConfig"),
("levit", "LevitConfig"),
("lilt", "LiltConfig"),
("llama", "LlamaConfig"),
("llava", "LlavaConfig"),
("longformer", "LongformerConfig"),
("longt5", "LongT5Config"),
("luke", "LukeConfig"),
("lxmert", "LxmertConfig"),
("m2m_100", "M2M100Config"),
("marian", "MarianConfig"),
("markuplm", "MarkupLMConfig"),
("mask2former", "Mask2FormerConfig"),
("maskformer", "MaskFormerConfig"),
("maskformer-swin", "MaskFormerSwinConfig"),
("mbart", "MBartConfig"),
("mctct", "MCTCTConfig"),
("mega", "MegaConfig"),
("megatron-bert", "MegatronBertConfig"),
("mgp-str", "MgpstrConfig"),
("mistral", "MistralConfig"),
("mobilebert", "MobileBertConfig"),
("mobilenet_v1", "MobileNetV1Config"),
("mobilenet_v2", "MobileNetV2Config"),
("mobilevit", "MobileViTConfig"),
("mobilevitv2", "MobileViTV2Config"),
("mpnet", "MPNetConfig"),
("mpt", "MptConfig"),
("mra", "MraConfig"),
("mt5", "MT5Config"),
("musicgen", "MusicgenConfig"),
("mvp", "MvpConfig"),
("nat", "NatConfig"),
("nezha", "NezhaConfig"),
("nllb-moe", "NllbMoeConfig"),
("nougat", "VisionEncoderDecoderConfig"),
("nystromformer", "NystromformerConfig"),
("oneformer", "OneFormerConfig"),
("open-llama", "OpenLlamaConfig"),
("openai-gpt", "OpenAIGPTConfig"),
("opt", "OPTConfig"),
("owlv2", "Owlv2Config"),
("owlvit", "OwlViTConfig"),
("patchtsmixer", "PatchTSMixerConfig"),
("patchtst", "PatchTSTConfig"),
("pegasus", "PegasusConfig"),
("pegasus_x", "PegasusXConfig"),
("perceiver", "PerceiverConfig"),
("persimmon", "PersimmonConfig"),
("phi", "PhiConfig"),
("pix2struct", "Pix2StructConfig"),
("plbart", "PLBartConfig"),
("poolformer", "PoolFormerConfig"),
("pop2piano", "Pop2PianoConfig"),
("prophetnet", "ProphetNetConfig"),
("pvt", "PvtConfig"),
("qdqbert", "QDQBertConfig"),
("rag", "RagConfig"),
("realm", "RealmConfig"),
("reformer", "ReformerConfig"),
("regnet", "RegNetConfig"),
("rembert", "RemBertConfig"),
("resnet", "ResNetConfig"),
("retribert", "RetriBertConfig"),
("roberta", "RobertaConfig"),
("roberta-prelayernorm", "RobertaPreLayerNormConfig"),
("roc_bert", "RoCBertConfig"),
("roformer", "RoFormerConfig"),
("rwkv", "RwkvConfig"),
("sam", "SamConfig"),
("seamless_m4t", "SeamlessM4TConfig"),
("seamless_m4t_v2", "SeamlessM4Tv2Config"),
("segformer", "SegformerConfig"),
("sew", "SEWConfig"),
("sew-d", "SEWDConfig"),
("speech-encoder-decoder", "SpeechEncoderDecoderConfig"),
("speech_to_text", "Speech2TextConfig"),
("speech_to_text_2", "Speech2Text2Config"),
("speecht5", "SpeechT5Config"),
("splinter", "SplinterConfig"),
("squeezebert", "SqueezeBertConfig"),
("swiftformer", "SwiftFormerConfig"),
("swin", "SwinConfig"),
("swin2sr", "Swin2SRConfig"),
("swinv2", "Swinv2Config"),
("switch_transformers", "SwitchTransformersConfig"),
("t5", "T5Config"),
("table-transformer", "TableTransformerConfig"),
("tapas", "TapasConfig"),
("time_series_transformer", "TimeSeriesTransformerConfig"),
("timesformer", "TimesformerConfig"),
("timm_backbone", "TimmBackboneConfig"),
("trajectory_transformer", "TrajectoryTransformerConfig"),
("transfo-xl", "TransfoXLConfig"),
("trocr", "TrOCRConfig"),
("tvlt", "TvltConfig"),
("tvp", "TvpConfig"),
("umt5", "UMT5Config"),
("unispeech", "UniSpeechConfig"),
("unispeech-sat", "UniSpeechSatConfig"),
("univnet", "UnivNetConfig"),
("upernet", "UperNetConfig"),
("van", "VanConfig"),
("videomae", "VideoMAEConfig"),
("vilt", "ViltConfig"),
("vision-encoder-decoder", "VisionEncoderDecoderConfig"),
("vision-text-dual-encoder", "VisionTextDualEncoderConfig"),
("visual_bert", "VisualBertConfig"),
("vit", "ViTConfig"),
("vit_hybrid", "ViTHybridConfig"),
("vit_mae", "ViTMAEConfig"),
("vit_msn", "ViTMSNConfig"),
("vitdet", "VitDetConfig"),
("vitmatte", "VitMatteConfig"),
("vits", "VitsConfig"),
("vivit", "VivitConfig"),
("wav2vec2", "Wav2Vec2Config"),
("wav2vec2-conformer", "Wav2Vec2ConformerConfig"),
("wavlm", "WavLMConfig"),
("whisper", "WhisperConfig"),
("xclip", "XCLIPConfig"),
("xglm", "XGLMConfig"),
("xlm", "XLMConfig"),
("xlm-prophetnet", "XLMProphetNetConfig"),
("xlm-roberta", "XLMRobertaConfig"),
("xlm-roberta-xl", "XLMRobertaXLConfig"),
("xlnet", "XLNetConfig"),
("xmod", "XmodConfig"),
("yolos", "YolosConfig"),
("yoso", "YosoConfig"),
]
)
CONFIG_ARCHIVE_MAP_MAPPING_NAMES = OrderedDict(
[
# Add archive maps here)
("albert", "ALBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("align", "ALIGN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("altclip", "ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("audio-spectrogram-transformer", "AUDIO_SPECTROGRAM_TRANSFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("autoformer", "AUTOFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bark", "BARK_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bart", "BART_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("beit", "BEIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bert", "BERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("big_bird", "BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bigbird_pegasus", "BIGBIRD_PEGASUS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("biogpt", "BIOGPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bit", "BIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("blenderbot", "BLENDERBOT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("blenderbot-small", "BLENDERBOT_SMALL_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("blip", "BLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("blip-2", "BLIP_2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bloom", "BLOOM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bridgetower", "BRIDGETOWER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("bros", "BROS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("camembert", "CAMEMBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("canine", "CANINE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("chinese_clip", "CHINESE_CLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("clap", "CLAP_PRETRAINED_MODEL_ARCHIVE_LIST"),
("clip", "CLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("clipseg", "CLIPSEG_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("clvp", "CLVP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("codegen", "CODEGEN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("conditional_detr", "CONDITIONAL_DETR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("convbert", "CONVBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("convnext", "CONVNEXT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("convnextv2", "CONVNEXTV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("cpmant", "CPMANT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("ctrl", "CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("cvt", "CVT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("data2vec-audio", "DATA2VEC_AUDIO_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("data2vec-text", "DATA2VEC_TEXT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("data2vec-vision", "DATA2VEC_VISION_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("deberta", "DEBERTA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("deberta-v2", "DEBERTA_V2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("deformable_detr", "DEFORMABLE_DETR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("deit", "DEIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("deta", "DETA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("detr", "DETR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("dinat", "DINAT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("dinov2", "DINOV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("distilbert", "DISTILBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("donut-swin", "DONUT_SWIN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("dpr", "DPR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("dpt", "DPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("efficientformer", "EFFICIENTFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("efficientnet", "EFFICIENTNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("electra", "ELECTRA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("encodec", "ENCODEC_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("ernie", "ERNIE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("ernie_m", "ERNIE_M_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("esm", "ESM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("falcon", "FALCON_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("flaubert", "FLAUBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("flava", "FLAVA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("fnet", "FNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("focalnet", "FOCALNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("fsmt", "FSMT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("funnel", "FUNNEL_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("fuyu", "FUYU_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("git", "GIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("glpn", "GLPN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gpt2", "GPT2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gpt_bigcode", "GPT_BIGCODE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gpt_neo", "GPT_NEO_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gpt_neox", "GPT_NEOX_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gpt_neox_japanese", "GPT_NEOX_JAPANESE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gptj", "GPTJ_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("gptsan-japanese", "GPTSAN_JAPANESE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("graphormer", "GRAPHORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("groupvit", "GROUPVIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("hubert", "HUBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("ibert", "IBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("idefics", "IDEFICS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("imagegpt", "IMAGEGPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("informer", "INFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("instructblip", "INSTRUCTBLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("jukebox", "JUKEBOX_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("kosmos-2", "KOSMOS2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("layoutlm", "LAYOUTLM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("layoutlmv2", "LAYOUTLMV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("layoutlmv3", "LAYOUTLMV3_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("led", "LED_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("levit", "LEVIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("lilt", "LILT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("llama", "LLAMA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("llava", "LLAVA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("longformer", "LONGFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("longt5", "LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("luke", "LUKE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("lxmert", "LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("m2m_100", "M2M_100_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("markuplm", "MARKUPLM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mask2former", "MASK2FORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("maskformer", "MASKFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mbart", "MBART_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mctct", "MCTCT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mega", "MEGA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("megatron-bert", "MEGATRON_BERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mgp-str", "MGP_STR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mistral", "MISTRAL_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mobilenet_v1", "MOBILENET_V1_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mobilenet_v2", "MOBILENET_V2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mobilevit", "MOBILEVIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mobilevitv2", "MOBILEVITV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mpnet", "MPNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mpt", "MPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mra", "MRA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("musicgen", "MUSICGEN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("mvp", "MVP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("nat", "NAT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("nezha", "NEZHA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("nllb-moe", "NLLB_MOE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("nystromformer", "NYSTROMFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("oneformer", "ONEFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("open-llama", "OPEN_LLAMA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("openai-gpt", "OPENAI_GPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("opt", "OPT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("owlv2", "OWLV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("owlvit", "OWLVIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("patchtsmixer", "PATCHTSMIXER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("patchtst", "PATCHTST_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("pegasus", "PEGASUS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("pegasus_x", "PEGASUS_X_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("perceiver", "PERCEIVER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("persimmon", "PERSIMMON_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("phi", "PHI_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("pix2struct", "PIX2STRUCT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("plbart", "PLBART_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("poolformer", "POOLFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("pop2piano", "POP2PIANO_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("prophetnet", "PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("pvt", "PVT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("qdqbert", "QDQBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("realm", "REALM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("regnet", "REGNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("rembert", "REMBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("resnet", "RESNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("retribert", "RETRIBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("roberta", "ROBERTA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("roberta-prelayernorm", "ROBERTA_PRELAYERNORM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("roc_bert", "ROC_BERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("roformer", "ROFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("rwkv", "RWKV_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("sam", "SAM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("seamless_m4t", "SEAMLESS_M4T_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("seamless_m4t_v2", "SEAMLESS_M4T_V2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("segformer", "SEGFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("sew", "SEW_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("sew-d", "SEW_D_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("speech_to_text", "SPEECH_TO_TEXT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("speech_to_text_2", "SPEECH_TO_TEXT_2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("speecht5", "SPEECHT5_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("splinter", "SPLINTER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("squeezebert", "SQUEEZEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("swiftformer", "SWIFTFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("swin", "SWIN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("swin2sr", "SWIN2SR_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("swinv2", "SWINV2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("switch_transformers", "SWITCH_TRANSFORMERS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("t5", "T5_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("table-transformer", "TABLE_TRANSFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("tapas", "TAPAS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("time_series_transformer", "TIME_SERIES_TRANSFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("timesformer", "TIMESFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("transfo-xl", "TRANSFO_XL_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("tvlt", "TVLT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("tvp", "TVP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("unispeech", "UNISPEECH_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("unispeech-sat", "UNISPEECH_SAT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("univnet", "UNIVNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("van", "VAN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("videomae", "VIDEOMAE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vilt", "VILT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("visual_bert", "VISUAL_BERT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vit", "VIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vit_hybrid", "VIT_HYBRID_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vit_mae", "VIT_MAE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vit_msn", "VIT_MSN_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vitdet", "VITDET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vitmatte", "VITMATTE_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vits", "VITS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("vivit", "VIVIT_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("wav2vec2", "WAV_2_VEC_2_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("wav2vec2-conformer", "WAV2VEC2_CONFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("whisper", "WHISPER_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xclip", "XCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xglm", "XGLM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xlm", "XLM_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xlm-prophetnet", "XLM_PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xlm-roberta", "XLM_ROBERTA_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xlnet", "XLNET_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("xmod", "XMOD_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("yolos", "YOLOS_PRETRAINED_CONFIG_ARCHIVE_MAP"),
("yoso", "YOSO_PRETRAINED_CONFIG_ARCHIVE_MAP"),
]
)
MODEL_NAMES_MAPPING = OrderedDict(
[
# Add full (and cased) model names here
("albert", "ALBERT"),
("align", "ALIGN"),
("altclip", "AltCLIP"),
("audio-spectrogram-transformer", "Audio Spectrogram Transformer"),
("autoformer", "Autoformer"),
("bark", "Bark"),
("bart", "BART"),
("barthez", "BARThez"),
("bartpho", "BARTpho"),
("beit", "BEiT"),
("bert", "BERT"),
("bert-generation", "Bert Generation"),
("bert-japanese", "BertJapanese"),
("bertweet", "BERTweet"),
("big_bird", "BigBird"),
("bigbird_pegasus", "BigBird-Pegasus"),
("biogpt", "BioGpt"),
("bit", "BiT"),
("blenderbot", "Blenderbot"),
("blenderbot-small", "BlenderbotSmall"),
("blip", "BLIP"),
("blip-2", "BLIP-2"),
("bloom", "BLOOM"),
("bort", "BORT"),
("bridgetower", "BridgeTower"),
("bros", "BROS"),
("byt5", "ByT5"),
("camembert", "CamemBERT"),
("canine", "CANINE"),
("chinese_clip", "Chinese-CLIP"),
("clap", "CLAP"),
("clip", "CLIP"),
("clip_vision_model", "CLIPVisionModel"),
("clipseg", "CLIPSeg"),
("clvp", "CLVP"),
("code_llama", "CodeLlama"),
("codegen", "CodeGen"),
("conditional_detr", "Conditional DETR"),
("convbert", "ConvBERT"),
("convnext", "ConvNeXT"),
("convnextv2", "ConvNeXTV2"),
("cpm", "CPM"),
("cpmant", "CPM-Ant"),
("ctrl", "CTRL"),
("cvt", "CvT"),
("data2vec-audio", "Data2VecAudio"),
("data2vec-text", "Data2VecText"),
("data2vec-vision", "Data2VecVision"),
("deberta", "DeBERTa"),
("deberta-v2", "DeBERTa-v2"),
("decision_transformer", "Decision Transformer"),
("deformable_detr", "Deformable DETR"),
("deit", "DeiT"),
("deplot", "DePlot"),
("deta", "DETA"),
("detr", "DETR"),
("dialogpt", "DialoGPT"),
("dinat", "DiNAT"),
("dinov2", "DINOv2"),
("distilbert", "DistilBERT"),
("dit", "DiT"),
("donut-swin", "DonutSwin"),
("dpr", "DPR"),
("dpt", "DPT"),
("efficientformer", "EfficientFormer"),
("efficientnet", "EfficientNet"),
("electra", "ELECTRA"),
("encodec", "EnCodec"),
("encoder-decoder", "Encoder decoder"),
("ernie", "ERNIE"),
("ernie_m", "ErnieM"),
("esm", "ESM"),
("falcon", "Falcon"),
("flan-t5", "FLAN-T5"),
("flan-ul2", "FLAN-UL2"),
("flaubert", "FlauBERT"),
("flava", "FLAVA"),
("fnet", "FNet"),
("focalnet", "FocalNet"),
("fsmt", "FairSeq Machine-Translation"),
("funnel", "Funnel Transformer"),
("fuyu", "Fuyu"),
("git", "GIT"),
("glpn", "GLPN"),
("gpt-sw3", "GPT-Sw3"),
("gpt2", "OpenAI GPT-2"),
("gpt_bigcode", "GPTBigCode"),
("gpt_neo", "GPT Neo"),
("gpt_neox", "GPT NeoX"),
("gpt_neox_japanese", "GPT NeoX Japanese"),
("gptj", "GPT-J"),
("gptsan-japanese", "GPTSAN-japanese"),
("graphormer", "Graphormer"),
("groupvit", "GroupViT"),
("herbert", "HerBERT"),
("hubert", "Hubert"),
("ibert", "I-BERT"),
("idefics", "IDEFICS"),
("imagegpt", "ImageGPT"),
("informer", "Informer"),
("instructblip", "InstructBLIP"),
("jukebox", "Jukebox"),
("kosmos-2", "KOSMOS-2"),
("layoutlm", "LayoutLM"),
("layoutlmv2", "LayoutLMv2"),
("layoutlmv3", "LayoutLMv3"),
("layoutxlm", "LayoutXLM"),
("led", "LED"),
("levit", "LeViT"),
("lilt", "LiLT"),
("llama", "LLaMA"),
("llama2", "Llama2"),
("llava", "Llava"),
("longformer", "Longformer"),
("longt5", "LongT5"),
("luke", "LUKE"),
("lxmert", "LXMERT"),
("m2m_100", "M2M100"),
("madlad-400", "MADLAD-400"),
("marian", "Marian"),
("markuplm", "MarkupLM"),
("mask2former", "Mask2Former"),
("maskformer", "MaskFormer"),
("maskformer-swin", "MaskFormerSwin"),
("matcha", "MatCha"),
("mbart", "mBART"),
("mbart50", "mBART-50"),
("mctct", "M-CTC-T"),
("mega", "MEGA"),
("megatron-bert", "Megatron-BERT"),
("megatron_gpt2", "Megatron-GPT2"),
("mgp-str", "MGP-STR"),
("mistral", "Mistral"),
("mluke", "mLUKE"),
("mms", "MMS"),
("mobilebert", "MobileBERT"),
("mobilenet_v1", "MobileNetV1"),
("mobilenet_v2", "MobileNetV2"),
("mobilevit", "MobileViT"),
("mobilevitv2", "MobileViTV2"),
("mpnet", "MPNet"),
("mpt", "MPT"),
("mra", "MRA"),
("mt5", "MT5"),
("musicgen", "MusicGen"),
("mvp", "MVP"),
("nat", "NAT"),
("nezha", "Nezha"),
("nllb", "NLLB"),
("nllb-moe", "NLLB-MOE"),
("nougat", "Nougat"),
("nystromformer", "Nyströmformer"),
("oneformer", "OneFormer"),
("open-llama", "OpenLlama"),
("openai-gpt", "OpenAI GPT"),
("opt", "OPT"),
("owlv2", "OWLv2"),
("owlvit", "OWL-ViT"),
("patchtsmixer", "PatchTSMixer"),
("patchtst", "PatchTST"),
("pegasus", "Pegasus"),
("pegasus_x", "PEGASUS-X"),
("perceiver", "Perceiver"),
("persimmon", "Persimmon"),
("phi", "Phi"),
("phobert", "PhoBERT"),
("pix2struct", "Pix2Struct"),
("plbart", "PLBart"),
("poolformer", "PoolFormer"),
("pop2piano", "Pop2Piano"),
("prophetnet", "ProphetNet"),
("pvt", "PVT"),
("qdqbert", "QDQBert"),
("rag", "RAG"),
("realm", "REALM"),
("reformer", "Reformer"),
("regnet", "RegNet"),
("rembert", "RemBERT"),
("resnet", "ResNet"),
("retribert", "RetriBERT"),
("roberta", "RoBERTa"),
("roberta-prelayernorm", "RoBERTa-PreLayerNorm"),
("roc_bert", "RoCBert"),
("roformer", "RoFormer"),
("rwkv", "RWKV"),
("sam", "SAM"),
("seamless_m4t", "SeamlessM4T"),
("seamless_m4t_v2", "SeamlessM4Tv2"),
("segformer", "SegFormer"),
("sew", "SEW"),
("sew-d", "SEW-D"),
("speech-encoder-decoder", "Speech Encoder decoder"),
("speech_to_text", "Speech2Text"),
("speech_to_text_2", "Speech2Text2"),
("speecht5", "SpeechT5"),
("splinter", "Splinter"),
("squeezebert", "SqueezeBERT"),
("swiftformer", "SwiftFormer"),
("swin", "Swin Transformer"),
("swin2sr", "Swin2SR"),
("swinv2", "Swin Transformer V2"),
("switch_transformers", "SwitchTransformers"),
("t5", "T5"),
("t5v1.1", "T5v1.1"),
("table-transformer", "Table Transformer"),
("tapas", "TAPAS"),
("tapex", "TAPEX"),
("time_series_transformer", "Time Series Transformer"),
("timesformer", "TimeSformer"),
("timm_backbone", "TimmBackbone"),
("trajectory_transformer", "Trajectory Transformer"),
("transfo-xl", "Transformer-XL"),
("trocr", "TrOCR"),
("tvlt", "TVLT"),
("tvp", "TVP"),
("ul2", "UL2"),
("umt5", "UMT5"),
("unispeech", "UniSpeech"),
("unispeech-sat", "UniSpeechSat"),
("univnet", "UnivNet"),
("upernet", "UPerNet"),
("van", "VAN"),
("videomae", "VideoMAE"),
("vilt", "ViLT"),
("vision-encoder-decoder", "Vision Encoder decoder"),
("vision-text-dual-encoder", "VisionTextDualEncoder"),
("visual_bert", "VisualBERT"),
("vit", "ViT"),
("vit_hybrid", "ViT Hybrid"),
("vit_mae", "ViTMAE"),
("vit_msn", "ViTMSN"),
("vitdet", "VitDet"),
("vitmatte", "ViTMatte"),
("vits", "VITS"),
("vivit", "ViViT"),
("wav2vec2", "Wav2Vec2"),
("wav2vec2-conformer", "Wav2Vec2-Conformer"),
("wav2vec2_phoneme", "Wav2Vec2Phoneme"),
("wavlm", "WavLM"),
("whisper", "Whisper"),
("xclip", "X-CLIP"),
("xglm", "XGLM"),
("xlm", "XLM"),
("xlm-prophetnet", "XLM-ProphetNet"),
("xlm-roberta", "XLM-RoBERTa"),
("xlm-roberta-xl", "XLM-RoBERTa-XL"),
("xlm-v", "XLM-V"),
("xlnet", "XLNet"),
("xls_r", "XLS-R"),
("xlsr_wav2vec2", "XLSR-Wav2Vec2"),
("xmod", "X-MOD"),
("yolos", "YOLOS"),
("yoso", "YOSO"),
]
)
# This is tied to the processing `-` -> `_` in `model_type_to_module_name`. For example, instead of putting
# `transfo-xl` (as in `CONFIG_MAPPING_NAMES`), we should use `transfo_xl`.
DEPRECATED_MODELS = [
"bort",
"mctct",
"mmbt",
"open_llama",
"retribert",
"tapex",
"trajectory_transformer",
"transfo_xl",
"van",
]
SPECIAL_MODEL_TYPE_TO_MODULE_NAME = OrderedDict(
[
("openai-gpt", "openai"),
("data2vec-audio", "data2vec"),
("data2vec-text", "data2vec"),
("data2vec-vision", "data2vec"),
("donut-swin", "donut"),
("kosmos-2", "kosmos2"),
("maskformer-swin", "maskformer"),
("xclip", "x_clip"),
("clip_vision_model", "clip"),
]
)
def model_type_to_module_name(key):
"""Converts a config key to the corresponding module."""
# Special treatment
if key in SPECIAL_MODEL_TYPE_TO_MODULE_NAME:
return SPECIAL_MODEL_TYPE_TO_MODULE_NAME[key]
key = key.replace("-", "_")
if key in DEPRECATED_MODELS:
key = f"deprecated.{key}"
return key
def config_class_to_model_type(config):
"""Converts a config class name to the corresponding model type"""
for key, cls in CONFIG_MAPPING_NAMES.items():
if cls == config:
return key
# if key not found check in extra content
for key, cls in CONFIG_MAPPING._extra_content.items():
if cls.__name__ == config:
return key
return None
class _LazyConfigMapping(OrderedDict):
"""
A dictionary that lazily load its values when they are requested.
"""
def __init__(self, mapping):
self._mapping = mapping
self._extra_content = {}
self._modules = {}
def __getitem__(self, key):
if key in self._extra_content:
return self._extra_content[key]
if key not in self._mapping:
raise KeyError(key)
value = self._mapping[key]
module_name = model_type_to_module_name(key)
if module_name not in self._modules:
self._modules[module_name] = importlib.import_module(f".{module_name}", "transformers.models")
if hasattr(self._modules[module_name], value):
return getattr(self._modules[module_name], value)
# Some of the mappings have entries model_type -> config of another model type. In that case we try to grab the
# object at the top level.
transformers_module = importlib.import_module("transformers")
return getattr(transformers_module, value)
def keys(self):
return list(self._mapping.keys()) + list(self._extra_content.keys())
def values(self):
return [self[k] for k in self._mapping.keys()] + list(self._extra_content.values())
def items(self):
return [(k, self[k]) for k in self._mapping.keys()] + list(self._extra_content.items())
def __iter__(self):
return iter(list(self._mapping.keys()) + list(self._extra_content.keys()))
def __contains__(self, item):
return item in self._mapping or item in self._extra_content
def register(self, key, value, exist_ok=False):
"""
Register a new configuration in this mapping.
"""
if key in self._mapping.keys() and not exist_ok:
raise ValueError(f"'{key}' is already used by a Transformers config, pick another name.")
self._extra_content[key] = value
CONFIG_MAPPING = _LazyConfigMapping(CONFIG_MAPPING_NAMES)
class _LazyLoadAllMappings(OrderedDict):
"""
A mapping that will load all pairs of key values at the first access (either by indexing, requestions keys, values,
etc.)
Args:
mapping: The mapping to load.
"""
def __init__(self, mapping):
self._mapping = mapping
self._initialized = False
self._data = {}
def _initialize(self):
if self._initialized:
return
warnings.warn(
"ALL_PRETRAINED_CONFIG_ARCHIVE_MAP is deprecated and will be removed in v5 of Transformers. "
"It does not contain all available model checkpoints, far from it. Checkout hf.co/models for that.",
FutureWarning,
)
for model_type, map_name in self._mapping.items():
module_name = model_type_to_module_name(model_type)
module = importlib.import_module(f".{module_name}", "transformers.models")
mapping = getattr(module, map_name)
self._data.update(mapping)
self._initialized = True
def __getitem__(self, key):
self._initialize()
return self._data[key]
def keys(self):
self._initialize()
return self._data.keys()
def values(self):
self._initialize()
return self._data.values()
def items(self):
self._initialize()
return self._data.keys()
def __iter__(self):
self._initialize()
return iter(self._data)
def __contains__(self, item):
self._initialize()
return item in self._data
ALL_PRETRAINED_CONFIG_ARCHIVE_MAP = _LazyLoadAllMappings(CONFIG_ARCHIVE_MAP_MAPPING_NAMES)
def _get_class_name(model_class: Union[str, List[str]]):
if isinstance(model_class, (list, tuple)):
return " or ".join([f"[`{c}`]" for c in model_class if c is not None])
return f"[`{model_class}`]"
def _list_model_options(indent, config_to_class=None, use_model_types=True):
if config_to_class is None and not use_model_types:
raise ValueError("Using `use_model_types=False` requires a `config_to_class` dictionary.")
if use_model_types:
if config_to_class is None:
model_type_to_name = {model_type: f"[`{config}`]" for model_type, config in CONFIG_MAPPING_NAMES.items()}
else:
model_type_to_name = {
model_type: _get_class_name(model_class)
for model_type, model_class in config_to_class.items()
if model_type in MODEL_NAMES_MAPPING
}
lines = [
f"{indent}- **{model_type}** -- {model_type_to_name[model_type]} ({MODEL_NAMES_MAPPING[model_type]} model)"
for model_type in sorted(model_type_to_name.keys())
]
else:
config_to_name = {
CONFIG_MAPPING_NAMES[config]: _get_class_name(clas)
for config, clas in config_to_class.items()
if config in CONFIG_MAPPING_NAMES
}
config_to_model_name = {
config: MODEL_NAMES_MAPPING[model_type] for model_type, config in CONFIG_MAPPING_NAMES.items()
}
lines = [
f"{indent}- [`{config_name}`] configuration class:"
f" {config_to_name[config_name]} ({config_to_model_name[config_name]} model)"
for config_name in sorted(config_to_name.keys())
]
return "\n".join(lines)
def replace_list_option_in_docstrings(config_to_class=None, use_model_types=True):
def docstring_decorator(fn):
docstrings = fn.__doc__
lines = docstrings.split("\n")
i = 0
while i < len(lines) and re.search(r"^(\s*)List options\s*$", lines[i]) is None:
i += 1
if i < len(lines):
indent = re.search(r"^(\s*)List options\s*$", lines[i]).groups()[0]
if use_model_types:
indent = f"{indent} "
lines[i] = _list_model_options(indent, config_to_class=config_to_class, use_model_types=use_model_types)
docstrings = "\n".join(lines)
else:
raise ValueError(
f"The function {fn} should have an empty 'List options' in its docstring as placeholder, current"
f" docstring is:\n{docstrings}"
)
fn.__doc__ = docstrings
return fn
return docstring_decorator
class AutoConfig:
r"""
This is a generic configuration class that will be instantiated as one of the configuration classes of the library
when created with the [`~AutoConfig.from_pretrained`] class method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
def __init__(self):
raise EnvironmentError(
"AutoConfig is designed to be instantiated "
"using the `AutoConfig.from_pretrained(pretrained_model_name_or_path)` method."
)
@classmethod
def for_model(cls, model_type: str, *args, **kwargs):
if model_type in CONFIG_MAPPING:
config_class = CONFIG_MAPPING[model_type]
return config_class(*args, **kwargs)
raise ValueError(
f"Unrecognized model identifier: {model_type}. Should contain one of {', '.join(CONFIG_MAPPING.keys())}"
)
@classmethod
@replace_list_option_in_docstrings()
def from_pretrained(cls, pretrained_model_name_or_path, **kwargs):
r"""
Instantiate one of the configuration classes of the library from a pretrained model configuration.
The configuration class to instantiate is selected based on the `model_type` property of the config object that
is loaded, or when it's missing, by falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a pretrained model configuration hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing a configuration file saved using the
[`~PretrainedConfig.save_pretrained`] method, or the [`~PreTrainedModel.save_pretrained`] method,
e.g., `./my_model_directory/`.
- A path or url to a saved configuration JSON *file*, e.g.,
`./my_model_directory/configuration.json`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download the model weights and configuration files and override the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
return_unused_kwargs (`bool`, *optional*, defaults to `False`):
If `False`, then this function returns just the final configuration object.
If `True`, then this functions returns a `Tuple(config, unused_kwargs)` where *unused_kwargs* is a
dictionary consisting of the key/value pairs whose keys are not configuration attributes: i.e., the
part of `kwargs` which has not been used to update `config` and is otherwise ignored.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
kwargs(additional keyword arguments, *optional*):
The values in kwargs of any keys which are configuration attributes will be used to override the loaded
values. Behavior concerning key/value pairs whose keys are *not* configuration attributes is controlled
by the `return_unused_kwargs` keyword parameter.
Examples:
```python
>>> from transformers import AutoConfig
>>> # Download configuration from huggingface.co and cache.
>>> config = AutoConfig.from_pretrained("bert-base-uncased")
>>> # Download configuration from huggingface.co (user-uploaded) and cache.
>>> config = AutoConfig.from_pretrained("dbmdz/bert-base-german-cased")
>>> # If configuration file is in a directory (e.g., was saved using *save_pretrained('./test/saved_model/')*).
>>> config = AutoConfig.from_pretrained("./test/bert_saved_model/")
>>> # Load a specific configuration file.
>>> config = AutoConfig.from_pretrained("./test/bert_saved_model/my_configuration.json")
>>> # Change some config attributes when loading a pretrained config.
>>> config = AutoConfig.from_pretrained("bert-base-uncased", output_attentions=True, foo=False)
>>> config.output_attentions
True
>>> config, unused_kwargs = AutoConfig.from_pretrained(
... "bert-base-uncased", output_attentions=True, foo=False, return_unused_kwargs=True
... )
>>> config.output_attentions
True
>>> unused_kwargs
{'foo': False}
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if kwargs.get("token", None) is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
kwargs["token"] = use_auth_token
kwargs["_from_auto"] = True
kwargs["name_or_path"] = pretrained_model_name_or_path
trust_remote_code = kwargs.pop("trust_remote_code", None)
code_revision = kwargs.pop("code_revision", None)
config_dict, unused_kwargs = PretrainedConfig.get_config_dict(pretrained_model_name_or_path, **kwargs)
has_remote_code = "auto_map" in config_dict and "AutoConfig" in config_dict["auto_map"]
has_local_code = "model_type" in config_dict and config_dict["model_type"] in CONFIG_MAPPING
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
class_ref = config_dict["auto_map"]["AutoConfig"]
config_class = get_class_from_dynamic_module(
class_ref, pretrained_model_name_or_path, code_revision=code_revision, **kwargs
)
if os.path.isdir(pretrained_model_name_or_path):
config_class.register_for_auto_class()
return config_class.from_pretrained(pretrained_model_name_or_path, **kwargs)
elif "model_type" in config_dict:
config_class = CONFIG_MAPPING[config_dict["model_type"]]
return config_class.from_dict(config_dict, **unused_kwargs)
else:
# Fallback: use pattern matching on the string.
# We go from longer names to shorter names to catch roberta before bert (for instance)
for pattern in sorted(CONFIG_MAPPING.keys(), key=len, reverse=True):
if pattern in str(pretrained_model_name_or_path):
return CONFIG_MAPPING[pattern].from_dict(config_dict, **unused_kwargs)
raise ValueError(
f"Unrecognized model in {pretrained_model_name_or_path}. "
f"Should have a `model_type` key in its {CONFIG_NAME}, or contain one of the following strings "
f"in its name: {', '.join(CONFIG_MAPPING.keys())}"
)
@staticmethod
def register(model_type, config, exist_ok=False):
"""
Register a new configuration for this class.
Args:
model_type (`str`): The model type like "bert" or "gpt".
config ([`PretrainedConfig`]): The config to register.
"""
if issubclass(config, PretrainedConfig) and config.model_type != model_type:
raise ValueError(
"The config you are passing has a `model_type` attribute that is not consistent with the model type "
f"you passed (config has {config.model_type} and you passed {model_type}. Fix one of those so they "
"match!"
)
CONFIG_MAPPING.register(model_type, config, exist_ok=exist_ok)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/image_processing_auto.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" AutoImageProcessor class."""
import importlib
import json
import os
import warnings
from collections import OrderedDict
from typing import Dict, Optional, Union
# Build the list of all image processors
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...image_processing_utils import ImageProcessingMixin
from ...utils import CONFIG_NAME, IMAGE_PROCESSOR_NAME, get_file_from_repo, logging
from .auto_factory import _LazyAutoMapping
from .configuration_auto import (
CONFIG_MAPPING_NAMES,
AutoConfig,
model_type_to_module_name,
replace_list_option_in_docstrings,
)
logger = logging.get_logger(__name__)
IMAGE_PROCESSOR_MAPPING_NAMES = OrderedDict(
[
("align", "EfficientNetImageProcessor"),
("beit", "BeitImageProcessor"),
("bit", "BitImageProcessor"),
("blip", "BlipImageProcessor"),
("blip-2", "BlipImageProcessor"),
("bridgetower", "BridgeTowerImageProcessor"),
("chinese_clip", "ChineseCLIPImageProcessor"),
("clip", "CLIPImageProcessor"),
("clipseg", "ViTImageProcessor"),
("conditional_detr", "ConditionalDetrImageProcessor"),
("convnext", "ConvNextImageProcessor"),
("convnextv2", "ConvNextImageProcessor"),
("cvt", "ConvNextImageProcessor"),
("data2vec-vision", "BeitImageProcessor"),
("deformable_detr", "DeformableDetrImageProcessor"),
("deit", "DeiTImageProcessor"),
("deta", "DetaImageProcessor"),
("detr", "DetrImageProcessor"),
("dinat", "ViTImageProcessor"),
("dinov2", "BitImageProcessor"),
("donut-swin", "DonutImageProcessor"),
("dpt", "DPTImageProcessor"),
("efficientformer", "EfficientFormerImageProcessor"),
("efficientnet", "EfficientNetImageProcessor"),
("flava", "FlavaImageProcessor"),
("focalnet", "BitImageProcessor"),
("fuyu", "FuyuImageProcessor"),
("git", "CLIPImageProcessor"),
("glpn", "GLPNImageProcessor"),
("groupvit", "CLIPImageProcessor"),
("idefics", "IdeficsImageProcessor"),
("imagegpt", "ImageGPTImageProcessor"),
("instructblip", "BlipImageProcessor"),
("kosmos-2", "CLIPImageProcessor"),
("layoutlmv2", "LayoutLMv2ImageProcessor"),
("layoutlmv3", "LayoutLMv3ImageProcessor"),
("levit", "LevitImageProcessor"),
("llava", "CLIPImageProcessor"),
("mask2former", "Mask2FormerImageProcessor"),
("maskformer", "MaskFormerImageProcessor"),
("mgp-str", "ViTImageProcessor"),
("mobilenet_v1", "MobileNetV1ImageProcessor"),
("mobilenet_v2", "MobileNetV2ImageProcessor"),
("mobilevit", "MobileViTImageProcessor"),
("mobilevit", "MobileViTImageProcessor"),
("mobilevitv2", "MobileViTImageProcessor"),
("nat", "ViTImageProcessor"),
("nougat", "NougatImageProcessor"),
("oneformer", "OneFormerImageProcessor"),
("owlv2", "Owlv2ImageProcessor"),
("owlvit", "OwlViTImageProcessor"),
("perceiver", "PerceiverImageProcessor"),
("pix2struct", "Pix2StructImageProcessor"),
("poolformer", "PoolFormerImageProcessor"),
("pvt", "PvtImageProcessor"),
("regnet", "ConvNextImageProcessor"),
("resnet", "ConvNextImageProcessor"),
("sam", "SamImageProcessor"),
("segformer", "SegformerImageProcessor"),
("swiftformer", "ViTImageProcessor"),
("swin", "ViTImageProcessor"),
("swin2sr", "Swin2SRImageProcessor"),
("swinv2", "ViTImageProcessor"),
("table-transformer", "DetrImageProcessor"),
("timesformer", "VideoMAEImageProcessor"),
("tvlt", "TvltImageProcessor"),
("tvp", "TvpImageProcessor"),
("upernet", "SegformerImageProcessor"),
("van", "ConvNextImageProcessor"),
("videomae", "VideoMAEImageProcessor"),
("vilt", "ViltImageProcessor"),
("vit", "ViTImageProcessor"),
("vit_hybrid", "ViTHybridImageProcessor"),
("vit_mae", "ViTImageProcessor"),
("vit_msn", "ViTImageProcessor"),
("vitmatte", "VitMatteImageProcessor"),
("xclip", "CLIPImageProcessor"),
("yolos", "YolosImageProcessor"),
]
)
IMAGE_PROCESSOR_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, IMAGE_PROCESSOR_MAPPING_NAMES)
def image_processor_class_from_name(class_name: str):
for module_name, extractors in IMAGE_PROCESSOR_MAPPING_NAMES.items():
if class_name in extractors:
module_name = model_type_to_module_name(module_name)
module = importlib.import_module(f".{module_name}", "transformers.models")
try:
return getattr(module, class_name)
except AttributeError:
continue
for _, extractor in IMAGE_PROCESSOR_MAPPING._extra_content.items():
if getattr(extractor, "__name__", None) == class_name:
return extractor
# We did not fine the class, but maybe it's because a dep is missing. In that case, the class will be in the main
# init and we return the proper dummy to get an appropriate error message.
main_module = importlib.import_module("transformers")
if hasattr(main_module, class_name):
return getattr(main_module, class_name)
return None
def get_image_processor_config(
pretrained_model_name_or_path: Union[str, os.PathLike],
cache_dir: Optional[Union[str, os.PathLike]] = None,
force_download: bool = False,
resume_download: bool = False,
proxies: Optional[Dict[str, str]] = None,
token: Optional[Union[bool, str]] = None,
revision: Optional[str] = None,
local_files_only: bool = False,
**kwargs,
):
"""
Loads the image processor configuration from a pretrained model image processor configuration.
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained model configuration hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced
under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a configuration file saved using the
[`~PreTrainedTokenizer.save_pretrained`] method, e.g., `./my_model_directory/`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the standard
cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the configuration files and override the cached versions if they
exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
local_files_only (`bool`, *optional*, defaults to `False`):
If `True`, will only try to load the image processor configuration from local files.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Returns:
`Dict`: The configuration of the image processor.
Examples:
```python
# Download configuration from huggingface.co and cache.
image_processor_config = get_image_processor_config("bert-base-uncased")
# This model does not have a image processor config so the result will be an empty dict.
image_processor_config = get_image_processor_config("xlm-roberta-base")
# Save a pretrained image processor locally and you can reload its config
from transformers import AutoTokenizer
image_processor = AutoImageProcessor.from_pretrained("google/vit-base-patch16-224-in21k")
image_processor.save_pretrained("image-processor-test")
image_processor_config = get_image_processor_config("image-processor-test")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if token is not None:
raise ValueError("`token` and `use_auth_token` are both specified. Please set only the argument `token`.")
token = use_auth_token
resolved_config_file = get_file_from_repo(
pretrained_model_name_or_path,
IMAGE_PROCESSOR_NAME,
cache_dir=cache_dir,
force_download=force_download,
resume_download=resume_download,
proxies=proxies,
token=token,
revision=revision,
local_files_only=local_files_only,
)
if resolved_config_file is None:
logger.info(
"Could not locate the image processor configuration file, will try to use the model config instead."
)
return {}
with open(resolved_config_file, encoding="utf-8") as reader:
return json.load(reader)
class AutoImageProcessor:
r"""
This is a generic image processor class that will be instantiated as one of the image processor classes of the
library when created with the [`AutoImageProcessor.from_pretrained`] class method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
def __init__(self):
raise EnvironmentError(
"AutoImageProcessor is designed to be instantiated "
"using the `AutoImageProcessor.from_pretrained(pretrained_model_name_or_path)` method."
)
@classmethod
@replace_list_option_in_docstrings(IMAGE_PROCESSOR_MAPPING_NAMES)
def from_pretrained(cls, pretrained_model_name_or_path, **kwargs):
r"""
Instantiate one of the image processor classes of the library from a pretrained model vocabulary.
The image processor class to instantiate is selected based on the `model_type` property of the config object
(either passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's
missing, by falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Params:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained image_processor hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a image processor file saved using the
[`~image_processing_utils.ImageProcessingMixin.save_pretrained`] method, e.g.,
`./my_model_directory/`.
- a path or url to a saved image processor JSON *file*, e.g.,
`./my_model_directory/preprocessor_config.json`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model image processor should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the image processor files and override the cached versions if
they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file
exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
return_unused_kwargs (`bool`, *optional*, defaults to `False`):
If `False`, then this function returns just the final image processor object. If `True`, then this
functions returns a `Tuple(image_processor, unused_kwargs)` where *unused_kwargs* is a dictionary
consisting of the key/value pairs whose keys are not image processor attributes: i.e., the part of
`kwargs` which has not been used to update `image_processor` and is otherwise ignored.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
kwargs (`Dict[str, Any]`, *optional*):
The values in kwargs of any keys which are image processor attributes will be used to override the
loaded values. Behavior concerning key/value pairs whose keys are *not* image processor attributes is
controlled by the `return_unused_kwargs` keyword parameter.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Examples:
```python
>>> from transformers import AutoImageProcessor
>>> # Download image processor from huggingface.co and cache.
>>> image_processor = AutoImageProcessor.from_pretrained("google/vit-base-patch16-224-in21k")
>>> # If image processor files are in a directory (e.g. image processor was saved using *save_pretrained('./test/saved_model/')*)
>>> # image_processor = AutoImageProcessor.from_pretrained("./test/saved_model/")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if kwargs.get("token", None) is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
kwargs["token"] = use_auth_token
config = kwargs.pop("config", None)
trust_remote_code = kwargs.pop("trust_remote_code", None)
kwargs["_from_auto"] = True
config_dict, _ = ImageProcessingMixin.get_image_processor_dict(pretrained_model_name_or_path, **kwargs)
image_processor_class = config_dict.get("image_processor_type", None)
image_processor_auto_map = None
if "AutoImageProcessor" in config_dict.get("auto_map", {}):
image_processor_auto_map = config_dict["auto_map"]["AutoImageProcessor"]
# If we still don't have the image processor class, check if we're loading from a previous feature extractor config
# and if so, infer the image processor class from there.
if image_processor_class is None and image_processor_auto_map is None:
feature_extractor_class = config_dict.pop("feature_extractor_type", None)
if feature_extractor_class is not None:
logger.warning(
"Could not find image processor class in the image processor config or the model config. Loading"
" based on pattern matching with the model's feature extractor configuration."
)
image_processor_class = feature_extractor_class.replace("FeatureExtractor", "ImageProcessor")
if "AutoFeatureExtractor" in config_dict.get("auto_map", {}):
feature_extractor_auto_map = config_dict["auto_map"]["AutoFeatureExtractor"]
image_processor_auto_map = feature_extractor_auto_map.replace("FeatureExtractor", "ImageProcessor")
logger.warning(
"Could not find image processor auto map in the image processor config or the model config."
" Loading based on pattern matching with the model's feature extractor configuration."
)
# If we don't find the image processor class in the image processor config, let's try the model config.
if image_processor_class is None and image_processor_auto_map is None:
if not isinstance(config, PretrainedConfig):
config = AutoConfig.from_pretrained(pretrained_model_name_or_path, **kwargs)
# It could be in `config.image_processor_type``
image_processor_class = getattr(config, "image_processor_type", None)
if hasattr(config, "auto_map") and "AutoImageProcessor" in config.auto_map:
image_processor_auto_map = config.auto_map["AutoImageProcessor"]
if image_processor_class is not None:
image_processor_class = image_processor_class_from_name(image_processor_class)
has_remote_code = image_processor_auto_map is not None
has_local_code = image_processor_class is not None or type(config) in IMAGE_PROCESSOR_MAPPING
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
image_processor_class = get_class_from_dynamic_module(
image_processor_auto_map, pretrained_model_name_or_path, **kwargs
)
_ = kwargs.pop("code_revision", None)
if os.path.isdir(pretrained_model_name_or_path):
image_processor_class.register_for_auto_class()
return image_processor_class.from_dict(config_dict, **kwargs)
elif image_processor_class is not None:
return image_processor_class.from_dict(config_dict, **kwargs)
# Last try: we use the IMAGE_PROCESSOR_MAPPING.
elif type(config) in IMAGE_PROCESSOR_MAPPING:
image_processor_class = IMAGE_PROCESSOR_MAPPING[type(config)]
return image_processor_class.from_dict(config_dict, **kwargs)
raise ValueError(
f"Unrecognized image processor in {pretrained_model_name_or_path}. Should have a "
f"`image_processor_type` key in its {IMAGE_PROCESSOR_NAME} of {CONFIG_NAME}, or one of the following "
f"`model_type` keys in its {CONFIG_NAME}: {', '.join(c for c in IMAGE_PROCESSOR_MAPPING_NAMES.keys())}"
)
@staticmethod
def register(config_class, image_processor_class, exist_ok=False):
"""
Register a new image processor for this class.
Args:
config_class ([`PretrainedConfig`]):
The configuration corresponding to the model to register.
image_processor_class ([`ImageProcessingMixin`]): The image processor to register.
"""
IMAGE_PROCESSOR_MAPPING.register(config_class, image_processor_class, exist_ok=exist_ok)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/processing_auto.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" AutoProcessor class."""
import importlib
import inspect
import json
import os
import warnings
from collections import OrderedDict
# Build the list of all feature extractors
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...feature_extraction_utils import FeatureExtractionMixin
from ...image_processing_utils import ImageProcessingMixin
from ...tokenization_utils import TOKENIZER_CONFIG_FILE
from ...utils import FEATURE_EXTRACTOR_NAME, get_file_from_repo, logging
from .auto_factory import _LazyAutoMapping
from .configuration_auto import (
CONFIG_MAPPING_NAMES,
AutoConfig,
model_type_to_module_name,
replace_list_option_in_docstrings,
)
from .feature_extraction_auto import AutoFeatureExtractor
from .image_processing_auto import AutoImageProcessor
from .tokenization_auto import AutoTokenizer
logger = logging.get_logger(__name__)
PROCESSOR_MAPPING_NAMES = OrderedDict(
[
("align", "AlignProcessor"),
("altclip", "AltCLIPProcessor"),
("bark", "BarkProcessor"),
("blip", "BlipProcessor"),
("blip-2", "Blip2Processor"),
("bridgetower", "BridgeTowerProcessor"),
("chinese_clip", "ChineseCLIPProcessor"),
("clap", "ClapProcessor"),
("clip", "CLIPProcessor"),
("clipseg", "CLIPSegProcessor"),
("clvp", "ClvpProcessor"),
("flava", "FlavaProcessor"),
("fuyu", "FuyuProcessor"),
("git", "GitProcessor"),
("groupvit", "CLIPProcessor"),
("hubert", "Wav2Vec2Processor"),
("idefics", "IdeficsProcessor"),
("instructblip", "InstructBlipProcessor"),
("kosmos-2", "Kosmos2Processor"),
("layoutlmv2", "LayoutLMv2Processor"),
("layoutlmv3", "LayoutLMv3Processor"),
("llava", "LlavaProcessor"),
("markuplm", "MarkupLMProcessor"),
("mctct", "MCTCTProcessor"),
("mgp-str", "MgpstrProcessor"),
("oneformer", "OneFormerProcessor"),
("owlv2", "Owlv2Processor"),
("owlvit", "OwlViTProcessor"),
("pix2struct", "Pix2StructProcessor"),
("pop2piano", "Pop2PianoProcessor"),
("sam", "SamProcessor"),
("seamless_m4t", "SeamlessM4TProcessor"),
("sew", "Wav2Vec2Processor"),
("sew-d", "Wav2Vec2Processor"),
("speech_to_text", "Speech2TextProcessor"),
("speech_to_text_2", "Speech2Text2Processor"),
("speecht5", "SpeechT5Processor"),
("trocr", "TrOCRProcessor"),
("tvlt", "TvltProcessor"),
("tvp", "TvpProcessor"),
("unispeech", "Wav2Vec2Processor"),
("unispeech-sat", "Wav2Vec2Processor"),
("vilt", "ViltProcessor"),
("vision-text-dual-encoder", "VisionTextDualEncoderProcessor"),
("wav2vec2", "Wav2Vec2Processor"),
("wav2vec2-conformer", "Wav2Vec2Processor"),
("wavlm", "Wav2Vec2Processor"),
("whisper", "WhisperProcessor"),
("xclip", "XCLIPProcessor"),
]
)
PROCESSOR_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, PROCESSOR_MAPPING_NAMES)
def processor_class_from_name(class_name: str):
for module_name, processors in PROCESSOR_MAPPING_NAMES.items():
if class_name in processors:
module_name = model_type_to_module_name(module_name)
module = importlib.import_module(f".{module_name}", "transformers.models")
try:
return getattr(module, class_name)
except AttributeError:
continue
for processor in PROCESSOR_MAPPING._extra_content.values():
if getattr(processor, "__name__", None) == class_name:
return processor
# We did not fine the class, but maybe it's because a dep is missing. In that case, the class will be in the main
# init and we return the proper dummy to get an appropriate error message.
main_module = importlib.import_module("transformers")
if hasattr(main_module, class_name):
return getattr(main_module, class_name)
return None
class AutoProcessor:
r"""
This is a generic processor class that will be instantiated as one of the processor classes of the library when
created with the [`AutoProcessor.from_pretrained`] class method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
def __init__(self):
raise EnvironmentError(
"AutoProcessor is designed to be instantiated "
"using the `AutoProcessor.from_pretrained(pretrained_model_name_or_path)` method."
)
@classmethod
@replace_list_option_in_docstrings(PROCESSOR_MAPPING_NAMES)
def from_pretrained(cls, pretrained_model_name_or_path, **kwargs):
r"""
Instantiate one of the processor classes of the library from a pretrained model vocabulary.
The processor class to instantiate is selected based on the `model_type` property of the config object (either
passed as an argument or loaded from `pretrained_model_name_or_path` if possible):
List options
Params:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained feature_extractor hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a processor files saved using the `save_pretrained()` method,
e.g., `./my_model_directory/`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model feature extractor should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the feature extractor files and override the cached versions
if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file
exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
return_unused_kwargs (`bool`, *optional*, defaults to `False`):
If `False`, then this function returns just the final feature extractor object. If `True`, then this
functions returns a `Tuple(feature_extractor, unused_kwargs)` where *unused_kwargs* is a dictionary
consisting of the key/value pairs whose keys are not feature extractor attributes: i.e., the part of
`kwargs` which has not been used to update `feature_extractor` and is otherwise ignored.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
kwargs (`Dict[str, Any]`, *optional*):
The values in kwargs of any keys which are feature extractor attributes will be used to override the
loaded values. Behavior concerning key/value pairs whose keys are *not* feature extractor attributes is
controlled by the `return_unused_kwargs` keyword parameter.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Examples:
```python
>>> from transformers import AutoProcessor
>>> # Download processor from huggingface.co and cache.
>>> processor = AutoProcessor.from_pretrained("facebook/wav2vec2-base-960h")
>>> # If processor files are in a directory (e.g. processor was saved using *save_pretrained('./test/saved_model/')*)
>>> # processor = AutoProcessor.from_pretrained("./test/saved_model/")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if kwargs.get("token", None) is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
kwargs["token"] = use_auth_token
config = kwargs.pop("config", None)
trust_remote_code = kwargs.pop("trust_remote_code", None)
kwargs["_from_auto"] = True
processor_class = None
processor_auto_map = None
# First, let's see if we have a preprocessor config.
# Filter the kwargs for `get_file_from_repo`.
get_file_from_repo_kwargs = {
key: kwargs[key] for key in inspect.signature(get_file_from_repo).parameters.keys() if key in kwargs
}
# Let's start by checking whether the processor class is saved in an image processor
preprocessor_config_file = get_file_from_repo(
pretrained_model_name_or_path, FEATURE_EXTRACTOR_NAME, **get_file_from_repo_kwargs
)
if preprocessor_config_file is not None:
config_dict, _ = ImageProcessingMixin.get_image_processor_dict(pretrained_model_name_or_path, **kwargs)
processor_class = config_dict.get("processor_class", None)
if "AutoProcessor" in config_dict.get("auto_map", {}):
processor_auto_map = config_dict["auto_map"]["AutoProcessor"]
# If not found, let's check whether the processor class is saved in a feature extractor config
if preprocessor_config_file is not None and processor_class is None:
config_dict, _ = FeatureExtractionMixin.get_feature_extractor_dict(pretrained_model_name_or_path, **kwargs)
processor_class = config_dict.get("processor_class", None)
if "AutoProcessor" in config_dict.get("auto_map", {}):
processor_auto_map = config_dict["auto_map"]["AutoProcessor"]
if processor_class is None:
# Next, let's check whether the processor class is saved in a tokenizer
tokenizer_config_file = get_file_from_repo(
pretrained_model_name_or_path, TOKENIZER_CONFIG_FILE, **get_file_from_repo_kwargs
)
if tokenizer_config_file is not None:
with open(tokenizer_config_file, encoding="utf-8") as reader:
config_dict = json.load(reader)
processor_class = config_dict.get("processor_class", None)
if "AutoProcessor" in config_dict.get("auto_map", {}):
processor_auto_map = config_dict["auto_map"]["AutoProcessor"]
if processor_class is None:
# Otherwise, load config, if it can be loaded.
if not isinstance(config, PretrainedConfig):
config = AutoConfig.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
# And check if the config contains the processor class.
processor_class = getattr(config, "processor_class", None)
if hasattr(config, "auto_map") and "AutoProcessor" in config.auto_map:
processor_auto_map = config.auto_map["AutoProcessor"]
if processor_class is not None:
processor_class = processor_class_from_name(processor_class)
has_remote_code = processor_auto_map is not None
has_local_code = processor_class is not None or type(config) in PROCESSOR_MAPPING
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
processor_class = get_class_from_dynamic_module(
processor_auto_map, pretrained_model_name_or_path, **kwargs
)
_ = kwargs.pop("code_revision", None)
if os.path.isdir(pretrained_model_name_or_path):
processor_class.register_for_auto_class()
return processor_class.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
elif processor_class is not None:
return processor_class.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
# Last try: we use the PROCESSOR_MAPPING.
elif type(config) in PROCESSOR_MAPPING:
return PROCESSOR_MAPPING[type(config)].from_pretrained(pretrained_model_name_or_path, **kwargs)
# At this stage, there doesn't seem to be a `Processor` class available for this model, so let's try a
# tokenizer.
try:
return AutoTokenizer.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
except Exception:
try:
return AutoImageProcessor.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
except Exception:
pass
try:
return AutoFeatureExtractor.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
except Exception:
pass
raise ValueError(
f"Unrecognized processing class in {pretrained_model_name_or_path}. Can't instantiate a processor, a "
"tokenizer, an image processor or a feature extractor for this model. Make sure the repository contains "
"the files of at least one of those processing classes."
)
@staticmethod
def register(config_class, processor_class, exist_ok=False):
"""
Register a new processor for this class.
Args:
config_class ([`PretrainedConfig`]):
The configuration corresponding to the model to register.
processor_class ([`FeatureExtractorMixin`]): The processor to register.
"""
PROCESSOR_MAPPING.register(config_class, processor_class, exist_ok=exist_ok)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_torch_available,
)
_import_structure = {
"auto_factory": ["get_values"],
"configuration_auto": ["ALL_PRETRAINED_CONFIG_ARCHIVE_MAP", "CONFIG_MAPPING", "MODEL_NAMES_MAPPING", "AutoConfig"],
"feature_extraction_auto": ["FEATURE_EXTRACTOR_MAPPING", "AutoFeatureExtractor"],
"image_processing_auto": ["IMAGE_PROCESSOR_MAPPING", "AutoImageProcessor"],
"processing_auto": ["PROCESSOR_MAPPING", "AutoProcessor"],
"tokenization_auto": ["TOKENIZER_MAPPING", "AutoTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_auto"] = [
"MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING",
"MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING",
"MODEL_FOR_AUDIO_XVECTOR_MAPPING",
"MODEL_FOR_BACKBONE_MAPPING",
"MODEL_FOR_CAUSAL_IMAGE_MODELING_MAPPING",
"MODEL_FOR_CAUSAL_LM_MAPPING",
"MODEL_FOR_CTC_MAPPING",
"MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING",
"MODEL_FOR_DEPTH_ESTIMATION_MAPPING",
"MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING",
"MODEL_FOR_IMAGE_SEGMENTATION_MAPPING",
"MODEL_FOR_IMAGE_TO_IMAGE_MAPPING",
"MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING",
"MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING",
"MODEL_FOR_MASKED_LM_MAPPING",
"MODEL_FOR_MASK_GENERATION_MAPPING",
"MODEL_FOR_MULTIPLE_CHOICE_MAPPING",
"MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING",
"MODEL_FOR_OBJECT_DETECTION_MAPPING",
"MODEL_FOR_PRETRAINING_MAPPING",
"MODEL_FOR_QUESTION_ANSWERING_MAPPING",
"MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING",
"MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING",
"MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING",
"MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING",
"MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING",
"MODEL_FOR_TEXT_ENCODING_MAPPING",
"MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING",
"MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING",
"MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING",
"MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING",
"MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING",
"MODEL_FOR_VISION_2_SEQ_MAPPING",
"MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING",
"MODEL_MAPPING",
"MODEL_WITH_LM_HEAD_MAPPING",
"MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING",
"MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING",
"MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING",
"MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING",
"AutoModel",
"AutoBackbone",
"AutoModelForAudioClassification",
"AutoModelForAudioFrameClassification",
"AutoModelForAudioXVector",
"AutoModelForCausalLM",
"AutoModelForCTC",
"AutoModelForDepthEstimation",
"AutoModelForImageClassification",
"AutoModelForImageSegmentation",
"AutoModelForImageToImage",
"AutoModelForInstanceSegmentation",
"AutoModelForMaskGeneration",
"AutoModelForTextEncoding",
"AutoModelForMaskedImageModeling",
"AutoModelForMaskedLM",
"AutoModelForMultipleChoice",
"AutoModelForNextSentencePrediction",
"AutoModelForObjectDetection",
"AutoModelForPreTraining",
"AutoModelForQuestionAnswering",
"AutoModelForSemanticSegmentation",
"AutoModelForSeq2SeqLM",
"AutoModelForSequenceClassification",
"AutoModelForSpeechSeq2Seq",
"AutoModelForTableQuestionAnswering",
"AutoModelForTextToSpectrogram",
"AutoModelForTextToWaveform",
"AutoModelForTokenClassification",
"AutoModelForUniversalSegmentation",
"AutoModelForVideoClassification",
"AutoModelForVision2Seq",
"AutoModelForVisualQuestionAnswering",
"AutoModelForDocumentQuestionAnswering",
"AutoModelWithLMHead",
"AutoModelForZeroShotImageClassification",
"AutoModelForZeroShotObjectDetection",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_auto"] = [
"TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING",
"TF_MODEL_FOR_CAUSAL_LM_MAPPING",
"TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING",
"TF_MODEL_FOR_MASK_GENERATION_MAPPING",
"TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING",
"TF_MODEL_FOR_MASKED_LM_MAPPING",
"TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING",
"TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING",
"TF_MODEL_FOR_PRETRAINING_MAPPING",
"TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING",
"TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING",
"TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING",
"TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING",
"TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING",
"TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING",
"TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING",
"TF_MODEL_FOR_TEXT_ENCODING_MAPPING",
"TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING",
"TF_MODEL_FOR_VISION_2_SEQ_MAPPING",
"TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING",
"TF_MODEL_MAPPING",
"TF_MODEL_WITH_LM_HEAD_MAPPING",
"TFAutoModel",
"TFAutoModelForAudioClassification",
"TFAutoModelForCausalLM",
"TFAutoModelForImageClassification",
"TFAutoModelForMaskedImageModeling",
"TFAutoModelForMaskedLM",
"TFAutoModelForMaskGeneration",
"TFAutoModelForMultipleChoice",
"TFAutoModelForNextSentencePrediction",
"TFAutoModelForPreTraining",
"TFAutoModelForDocumentQuestionAnswering",
"TFAutoModelForQuestionAnswering",
"TFAutoModelForSemanticSegmentation",
"TFAutoModelForSeq2SeqLM",
"TFAutoModelForSequenceClassification",
"TFAutoModelForSpeechSeq2Seq",
"TFAutoModelForTableQuestionAnswering",
"TFAutoModelForTextEncoding",
"TFAutoModelForTokenClassification",
"TFAutoModelForVision2Seq",
"TFAutoModelForZeroShotImageClassification",
"TFAutoModelWithLMHead",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_auto"] = [
"FLAX_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING",
"FLAX_MODEL_FOR_CAUSAL_LM_MAPPING",
"FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING",
"FLAX_MODEL_FOR_MASKED_LM_MAPPING",
"FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING",
"FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING",
"FLAX_MODEL_FOR_PRETRAINING_MAPPING",
"FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING",
"FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING",
"FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING",
"FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING",
"FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING",
"FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING",
"FLAX_MODEL_MAPPING",
"FlaxAutoModel",
"FlaxAutoModelForCausalLM",
"FlaxAutoModelForImageClassification",
"FlaxAutoModelForMaskedLM",
"FlaxAutoModelForMultipleChoice",
"FlaxAutoModelForNextSentencePrediction",
"FlaxAutoModelForPreTraining",
"FlaxAutoModelForQuestionAnswering",
"FlaxAutoModelForSeq2SeqLM",
"FlaxAutoModelForSequenceClassification",
"FlaxAutoModelForSpeechSeq2Seq",
"FlaxAutoModelForTokenClassification",
"FlaxAutoModelForVision2Seq",
]
if TYPE_CHECKING:
from .auto_factory import get_values
from .configuration_auto import ALL_PRETRAINED_CONFIG_ARCHIVE_MAP, CONFIG_MAPPING, MODEL_NAMES_MAPPING, AutoConfig
from .feature_extraction_auto import FEATURE_EXTRACTOR_MAPPING, AutoFeatureExtractor
from .image_processing_auto import IMAGE_PROCESSOR_MAPPING, AutoImageProcessor
from .processing_auto import PROCESSOR_MAPPING, AutoProcessor
from .tokenization_auto import TOKENIZER_MAPPING, AutoTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_auto import (
MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING,
MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING,
MODEL_FOR_AUDIO_XVECTOR_MAPPING,
MODEL_FOR_BACKBONE_MAPPING,
MODEL_FOR_CAUSAL_IMAGE_MODELING_MAPPING,
MODEL_FOR_CAUSAL_LM_MAPPING,
MODEL_FOR_CTC_MAPPING,
MODEL_FOR_DEPTH_ESTIMATION_MAPPING,
MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING,
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
MODEL_FOR_IMAGE_SEGMENTATION_MAPPING,
MODEL_FOR_IMAGE_TO_IMAGE_MAPPING,
MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING,
MODEL_FOR_MASK_GENERATION_MAPPING,
MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING,
MODEL_FOR_MASKED_LM_MAPPING,
MODEL_FOR_MULTIPLE_CHOICE_MAPPING,
MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING,
MODEL_FOR_OBJECT_DETECTION_MAPPING,
MODEL_FOR_PRETRAINING_MAPPING,
MODEL_FOR_QUESTION_ANSWERING_MAPPING,
MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING,
MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING,
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING,
MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING,
MODEL_FOR_TEXT_ENCODING_MAPPING,
MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING,
MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING,
MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING,
MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING,
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING,
MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING,
MODEL_FOR_VISION_2_SEQ_MAPPING,
MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING,
MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING,
MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING,
MODEL_MAPPING,
MODEL_WITH_LM_HEAD_MAPPING,
AutoBackbone,
AutoModel,
AutoModelForAudioClassification,
AutoModelForAudioFrameClassification,
AutoModelForAudioXVector,
AutoModelForCausalLM,
AutoModelForCTC,
AutoModelForDepthEstimation,
AutoModelForDocumentQuestionAnswering,
AutoModelForImageClassification,
AutoModelForImageSegmentation,
AutoModelForImageToImage,
AutoModelForInstanceSegmentation,
AutoModelForMaskedImageModeling,
AutoModelForMaskedLM,
AutoModelForMaskGeneration,
AutoModelForMultipleChoice,
AutoModelForNextSentencePrediction,
AutoModelForObjectDetection,
AutoModelForPreTraining,
AutoModelForQuestionAnswering,
AutoModelForSemanticSegmentation,
AutoModelForSeq2SeqLM,
AutoModelForSequenceClassification,
AutoModelForSpeechSeq2Seq,
AutoModelForTableQuestionAnswering,
AutoModelForTextEncoding,
AutoModelForTextToSpectrogram,
AutoModelForTextToWaveform,
AutoModelForTokenClassification,
AutoModelForUniversalSegmentation,
AutoModelForVideoClassification,
AutoModelForVision2Seq,
AutoModelForVisualQuestionAnswering,
AutoModelForZeroShotImageClassification,
AutoModelForZeroShotObjectDetection,
AutoModelWithLMHead,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_auto import (
TF_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING,
TF_MODEL_FOR_CAUSAL_LM_MAPPING,
TF_MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING,
TF_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
TF_MODEL_FOR_MASK_GENERATION_MAPPING,
TF_MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING,
TF_MODEL_FOR_MASKED_LM_MAPPING,
TF_MODEL_FOR_MULTIPLE_CHOICE_MAPPING,
TF_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING,
TF_MODEL_FOR_PRETRAINING_MAPPING,
TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING,
TF_MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING,
TF_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING,
TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
TF_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING,
TF_MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING,
TF_MODEL_FOR_TEXT_ENCODING_MAPPING,
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
TF_MODEL_FOR_VISION_2_SEQ_MAPPING,
TF_MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING,
TF_MODEL_MAPPING,
TF_MODEL_WITH_LM_HEAD_MAPPING,
TFAutoModel,
TFAutoModelForAudioClassification,
TFAutoModelForCausalLM,
TFAutoModelForDocumentQuestionAnswering,
TFAutoModelForImageClassification,
TFAutoModelForMaskedImageModeling,
TFAutoModelForMaskedLM,
TFAutoModelForMaskGeneration,
TFAutoModelForMultipleChoice,
TFAutoModelForNextSentencePrediction,
TFAutoModelForPreTraining,
TFAutoModelForQuestionAnswering,
TFAutoModelForSemanticSegmentation,
TFAutoModelForSeq2SeqLM,
TFAutoModelForSequenceClassification,
TFAutoModelForSpeechSeq2Seq,
TFAutoModelForTableQuestionAnswering,
TFAutoModelForTextEncoding,
TFAutoModelForTokenClassification,
TFAutoModelForVision2Seq,
TFAutoModelForZeroShotImageClassification,
TFAutoModelWithLMHead,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_auto import (
FLAX_MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING,
FLAX_MODEL_FOR_CAUSAL_LM_MAPPING,
FLAX_MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING,
FLAX_MODEL_FOR_MASKED_LM_MAPPING,
FLAX_MODEL_FOR_MULTIPLE_CHOICE_MAPPING,
FLAX_MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING,
FLAX_MODEL_FOR_PRETRAINING_MAPPING,
FLAX_MODEL_FOR_QUESTION_ANSWERING_MAPPING,
FLAX_MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING,
FLAX_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
FLAX_MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING,
FLAX_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
FLAX_MODEL_FOR_VISION_2_SEQ_MAPPING,
FLAX_MODEL_MAPPING,
FlaxAutoModel,
FlaxAutoModelForCausalLM,
FlaxAutoModelForImageClassification,
FlaxAutoModelForMaskedLM,
FlaxAutoModelForMultipleChoice,
FlaxAutoModelForNextSentencePrediction,
FlaxAutoModelForPreTraining,
FlaxAutoModelForQuestionAnswering,
FlaxAutoModelForSeq2SeqLM,
FlaxAutoModelForSequenceClassification,
FlaxAutoModelForSpeechSeq2Seq,
FlaxAutoModelForTokenClassification,
FlaxAutoModelForVision2Seq,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/modeling_auto.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Auto Model class."""
import warnings
from collections import OrderedDict
from ...utils import logging
from .auto_factory import (
_BaseAutoBackboneClass,
_BaseAutoModelClass,
_LazyAutoMapping,
auto_class_update,
)
from .configuration_auto import CONFIG_MAPPING_NAMES
logger = logging.get_logger(__name__)
MODEL_MAPPING_NAMES = OrderedDict(
[
# Base model mapping
("albert", "AlbertModel"),
("align", "AlignModel"),
("altclip", "AltCLIPModel"),
("audio-spectrogram-transformer", "ASTModel"),
("autoformer", "AutoformerModel"),
("bark", "BarkModel"),
("bart", "BartModel"),
("beit", "BeitModel"),
("bert", "BertModel"),
("bert-generation", "BertGenerationEncoder"),
("big_bird", "BigBirdModel"),
("bigbird_pegasus", "BigBirdPegasusModel"),
("biogpt", "BioGptModel"),
("bit", "BitModel"),
("blenderbot", "BlenderbotModel"),
("blenderbot-small", "BlenderbotSmallModel"),
("blip", "BlipModel"),
("blip-2", "Blip2Model"),
("bloom", "BloomModel"),
("bridgetower", "BridgeTowerModel"),
("bros", "BrosModel"),
("camembert", "CamembertModel"),
("canine", "CanineModel"),
("chinese_clip", "ChineseCLIPModel"),
("clap", "ClapModel"),
("clip", "CLIPModel"),
("clip_vision_model", "CLIPVisionModel"),
("clipseg", "CLIPSegModel"),
("clvp", "ClvpModelForConditionalGeneration"),
("code_llama", "LlamaModel"),
("codegen", "CodeGenModel"),
("conditional_detr", "ConditionalDetrModel"),
("convbert", "ConvBertModel"),
("convnext", "ConvNextModel"),
("convnextv2", "ConvNextV2Model"),
("cpmant", "CpmAntModel"),
("ctrl", "CTRLModel"),
("cvt", "CvtModel"),
("data2vec-audio", "Data2VecAudioModel"),
("data2vec-text", "Data2VecTextModel"),
("data2vec-vision", "Data2VecVisionModel"),
("deberta", "DebertaModel"),
("deberta-v2", "DebertaV2Model"),
("decision_transformer", "DecisionTransformerModel"),
("deformable_detr", "DeformableDetrModel"),
("deit", "DeiTModel"),
("deta", "DetaModel"),
("detr", "DetrModel"),
("dinat", "DinatModel"),
("dinov2", "Dinov2Model"),
("distilbert", "DistilBertModel"),
("donut-swin", "DonutSwinModel"),
("dpr", "DPRQuestionEncoder"),
("dpt", "DPTModel"),
("efficientformer", "EfficientFormerModel"),
("efficientnet", "EfficientNetModel"),
("electra", "ElectraModel"),
("encodec", "EncodecModel"),
("ernie", "ErnieModel"),
("ernie_m", "ErnieMModel"),
("esm", "EsmModel"),
("falcon", "FalconModel"),
("flaubert", "FlaubertModel"),
("flava", "FlavaModel"),
("fnet", "FNetModel"),
("focalnet", "FocalNetModel"),
("fsmt", "FSMTModel"),
("funnel", ("FunnelModel", "FunnelBaseModel")),
("git", "GitModel"),
("glpn", "GLPNModel"),
("gpt-sw3", "GPT2Model"),
("gpt2", "GPT2Model"),
("gpt_bigcode", "GPTBigCodeModel"),
("gpt_neo", "GPTNeoModel"),
("gpt_neox", "GPTNeoXModel"),
("gpt_neox_japanese", "GPTNeoXJapaneseModel"),
("gptj", "GPTJModel"),
("gptsan-japanese", "GPTSanJapaneseForConditionalGeneration"),
("graphormer", "GraphormerModel"),
("groupvit", "GroupViTModel"),
("hubert", "HubertModel"),
("ibert", "IBertModel"),
("idefics", "IdeficsModel"),
("imagegpt", "ImageGPTModel"),
("informer", "InformerModel"),
("jukebox", "JukeboxModel"),
("kosmos-2", "Kosmos2Model"),
("layoutlm", "LayoutLMModel"),
("layoutlmv2", "LayoutLMv2Model"),
("layoutlmv3", "LayoutLMv3Model"),
("led", "LEDModel"),
("levit", "LevitModel"),
("lilt", "LiltModel"),
("llama", "LlamaModel"),
("longformer", "LongformerModel"),
("longt5", "LongT5Model"),
("luke", "LukeModel"),
("lxmert", "LxmertModel"),
("m2m_100", "M2M100Model"),
("marian", "MarianModel"),
("markuplm", "MarkupLMModel"),
("mask2former", "Mask2FormerModel"),
("maskformer", "MaskFormerModel"),
("maskformer-swin", "MaskFormerSwinModel"),
("mbart", "MBartModel"),
("mctct", "MCTCTModel"),
("mega", "MegaModel"),
("megatron-bert", "MegatronBertModel"),
("mgp-str", "MgpstrForSceneTextRecognition"),
("mistral", "MistralModel"),
("mobilebert", "MobileBertModel"),
("mobilenet_v1", "MobileNetV1Model"),
("mobilenet_v2", "MobileNetV2Model"),
("mobilevit", "MobileViTModel"),
("mobilevitv2", "MobileViTV2Model"),
("mpnet", "MPNetModel"),
("mpt", "MptModel"),
("mra", "MraModel"),
("mt5", "MT5Model"),
("mvp", "MvpModel"),
("nat", "NatModel"),
("nezha", "NezhaModel"),
("nllb-moe", "NllbMoeModel"),
("nystromformer", "NystromformerModel"),
("oneformer", "OneFormerModel"),
("open-llama", "OpenLlamaModel"),
("openai-gpt", "OpenAIGPTModel"),
("opt", "OPTModel"),
("owlv2", "Owlv2Model"),
("owlvit", "OwlViTModel"),
("patchtsmixer", "PatchTSMixerModel"),
("patchtst", "PatchTSTModel"),
("pegasus", "PegasusModel"),
("pegasus_x", "PegasusXModel"),
("perceiver", "PerceiverModel"),
("persimmon", "PersimmonModel"),
("phi", "PhiModel"),
("plbart", "PLBartModel"),
("poolformer", "PoolFormerModel"),
("prophetnet", "ProphetNetModel"),
("pvt", "PvtModel"),
("qdqbert", "QDQBertModel"),
("reformer", "ReformerModel"),
("regnet", "RegNetModel"),
("rembert", "RemBertModel"),
("resnet", "ResNetModel"),
("retribert", "RetriBertModel"),
("roberta", "RobertaModel"),
("roberta-prelayernorm", "RobertaPreLayerNormModel"),
("roc_bert", "RoCBertModel"),
("roformer", "RoFormerModel"),
("rwkv", "RwkvModel"),
("sam", "SamModel"),
("seamless_m4t", "SeamlessM4TModel"),
("seamless_m4t_v2", "SeamlessM4Tv2Model"),
("segformer", "SegformerModel"),
("sew", "SEWModel"),
("sew-d", "SEWDModel"),
("speech_to_text", "Speech2TextModel"),
("speecht5", "SpeechT5Model"),
("splinter", "SplinterModel"),
("squeezebert", "SqueezeBertModel"),
("swiftformer", "SwiftFormerModel"),
("swin", "SwinModel"),
("swin2sr", "Swin2SRModel"),
("swinv2", "Swinv2Model"),
("switch_transformers", "SwitchTransformersModel"),
("t5", "T5Model"),
("table-transformer", "TableTransformerModel"),
("tapas", "TapasModel"),
("time_series_transformer", "TimeSeriesTransformerModel"),
("timesformer", "TimesformerModel"),
("timm_backbone", "TimmBackbone"),
("trajectory_transformer", "TrajectoryTransformerModel"),
("transfo-xl", "TransfoXLModel"),
("tvlt", "TvltModel"),
("tvp", "TvpModel"),
("umt5", "UMT5Model"),
("unispeech", "UniSpeechModel"),
("unispeech-sat", "UniSpeechSatModel"),
("univnet", "UnivNetModel"),
("van", "VanModel"),
("videomae", "VideoMAEModel"),
("vilt", "ViltModel"),
("vision-text-dual-encoder", "VisionTextDualEncoderModel"),
("visual_bert", "VisualBertModel"),
("vit", "ViTModel"),
("vit_hybrid", "ViTHybridModel"),
("vit_mae", "ViTMAEModel"),
("vit_msn", "ViTMSNModel"),
("vitdet", "VitDetModel"),
("vits", "VitsModel"),
("vivit", "VivitModel"),
("wav2vec2", "Wav2Vec2Model"),
("wav2vec2-conformer", "Wav2Vec2ConformerModel"),
("wavlm", "WavLMModel"),
("whisper", "WhisperModel"),
("xclip", "XCLIPModel"),
("xglm", "XGLMModel"),
("xlm", "XLMModel"),
("xlm-prophetnet", "XLMProphetNetModel"),
("xlm-roberta", "XLMRobertaModel"),
("xlm-roberta-xl", "XLMRobertaXLModel"),
("xlnet", "XLNetModel"),
("xmod", "XmodModel"),
("yolos", "YolosModel"),
("yoso", "YosoModel"),
]
)
MODEL_FOR_PRETRAINING_MAPPING_NAMES = OrderedDict(
[
# Model for pre-training mapping
("albert", "AlbertForPreTraining"),
("bart", "BartForConditionalGeneration"),
("bert", "BertForPreTraining"),
("big_bird", "BigBirdForPreTraining"),
("bloom", "BloomForCausalLM"),
("camembert", "CamembertForMaskedLM"),
("ctrl", "CTRLLMHeadModel"),
("data2vec-text", "Data2VecTextForMaskedLM"),
("deberta", "DebertaForMaskedLM"),
("deberta-v2", "DebertaV2ForMaskedLM"),
("distilbert", "DistilBertForMaskedLM"),
("electra", "ElectraForPreTraining"),
("ernie", "ErnieForPreTraining"),
("flaubert", "FlaubertWithLMHeadModel"),
("flava", "FlavaForPreTraining"),
("fnet", "FNetForPreTraining"),
("fsmt", "FSMTForConditionalGeneration"),
("funnel", "FunnelForPreTraining"),
("gpt-sw3", "GPT2LMHeadModel"),
("gpt2", "GPT2LMHeadModel"),
("gpt_bigcode", "GPTBigCodeForCausalLM"),
("gptsan-japanese", "GPTSanJapaneseForConditionalGeneration"),
("ibert", "IBertForMaskedLM"),
("idefics", "IdeficsForVisionText2Text"),
("layoutlm", "LayoutLMForMaskedLM"),
("llava", "LlavaForConditionalGeneration"),
("longformer", "LongformerForMaskedLM"),
("luke", "LukeForMaskedLM"),
("lxmert", "LxmertForPreTraining"),
("mega", "MegaForMaskedLM"),
("megatron-bert", "MegatronBertForPreTraining"),
("mobilebert", "MobileBertForPreTraining"),
("mpnet", "MPNetForMaskedLM"),
("mpt", "MptForCausalLM"),
("mra", "MraForMaskedLM"),
("mvp", "MvpForConditionalGeneration"),
("nezha", "NezhaForPreTraining"),
("nllb-moe", "NllbMoeForConditionalGeneration"),
("openai-gpt", "OpenAIGPTLMHeadModel"),
("retribert", "RetriBertModel"),
("roberta", "RobertaForMaskedLM"),
("roberta-prelayernorm", "RobertaPreLayerNormForMaskedLM"),
("roc_bert", "RoCBertForPreTraining"),
("rwkv", "RwkvForCausalLM"),
("splinter", "SplinterForPreTraining"),
("squeezebert", "SqueezeBertForMaskedLM"),
("switch_transformers", "SwitchTransformersForConditionalGeneration"),
("t5", "T5ForConditionalGeneration"),
("tapas", "TapasForMaskedLM"),
("transfo-xl", "TransfoXLLMHeadModel"),
("tvlt", "TvltForPreTraining"),
("unispeech", "UniSpeechForPreTraining"),
("unispeech-sat", "UniSpeechSatForPreTraining"),
("videomae", "VideoMAEForPreTraining"),
("visual_bert", "VisualBertForPreTraining"),
("vit_mae", "ViTMAEForPreTraining"),
("wav2vec2", "Wav2Vec2ForPreTraining"),
("wav2vec2-conformer", "Wav2Vec2ConformerForPreTraining"),
("xlm", "XLMWithLMHeadModel"),
("xlm-roberta", "XLMRobertaForMaskedLM"),
("xlm-roberta-xl", "XLMRobertaXLForMaskedLM"),
("xlnet", "XLNetLMHeadModel"),
("xmod", "XmodForMaskedLM"),
]
)
MODEL_WITH_LM_HEAD_MAPPING_NAMES = OrderedDict(
[
# Model with LM heads mapping
("albert", "AlbertForMaskedLM"),
("bart", "BartForConditionalGeneration"),
("bert", "BertForMaskedLM"),
("big_bird", "BigBirdForMaskedLM"),
("bigbird_pegasus", "BigBirdPegasusForConditionalGeneration"),
("blenderbot-small", "BlenderbotSmallForConditionalGeneration"),
("bloom", "BloomForCausalLM"),
("camembert", "CamembertForMaskedLM"),
("codegen", "CodeGenForCausalLM"),
("convbert", "ConvBertForMaskedLM"),
("cpmant", "CpmAntForCausalLM"),
("ctrl", "CTRLLMHeadModel"),
("data2vec-text", "Data2VecTextForMaskedLM"),
("deberta", "DebertaForMaskedLM"),
("deberta-v2", "DebertaV2ForMaskedLM"),
("distilbert", "DistilBertForMaskedLM"),
("electra", "ElectraForMaskedLM"),
("encoder-decoder", "EncoderDecoderModel"),
("ernie", "ErnieForMaskedLM"),
("esm", "EsmForMaskedLM"),
("flaubert", "FlaubertWithLMHeadModel"),
("fnet", "FNetForMaskedLM"),
("fsmt", "FSMTForConditionalGeneration"),
("funnel", "FunnelForMaskedLM"),
("git", "GitForCausalLM"),
("gpt-sw3", "GPT2LMHeadModel"),
("gpt2", "GPT2LMHeadModel"),
("gpt_bigcode", "GPTBigCodeForCausalLM"),
("gpt_neo", "GPTNeoForCausalLM"),
("gpt_neox", "GPTNeoXForCausalLM"),
("gpt_neox_japanese", "GPTNeoXJapaneseForCausalLM"),
("gptj", "GPTJForCausalLM"),
("gptsan-japanese", "GPTSanJapaneseForConditionalGeneration"),
("ibert", "IBertForMaskedLM"),
("layoutlm", "LayoutLMForMaskedLM"),
("led", "LEDForConditionalGeneration"),
("longformer", "LongformerForMaskedLM"),
("longt5", "LongT5ForConditionalGeneration"),
("luke", "LukeForMaskedLM"),
("m2m_100", "M2M100ForConditionalGeneration"),
("marian", "MarianMTModel"),
("mega", "MegaForMaskedLM"),
("megatron-bert", "MegatronBertForCausalLM"),
("mobilebert", "MobileBertForMaskedLM"),
("mpnet", "MPNetForMaskedLM"),
("mpt", "MptForCausalLM"),
("mra", "MraForMaskedLM"),
("mvp", "MvpForConditionalGeneration"),
("nezha", "NezhaForMaskedLM"),
("nllb-moe", "NllbMoeForConditionalGeneration"),
("nystromformer", "NystromformerForMaskedLM"),
("openai-gpt", "OpenAIGPTLMHeadModel"),
("pegasus_x", "PegasusXForConditionalGeneration"),
("plbart", "PLBartForConditionalGeneration"),
("pop2piano", "Pop2PianoForConditionalGeneration"),
("qdqbert", "QDQBertForMaskedLM"),
("reformer", "ReformerModelWithLMHead"),
("rembert", "RemBertForMaskedLM"),
("roberta", "RobertaForMaskedLM"),
("roberta-prelayernorm", "RobertaPreLayerNormForMaskedLM"),
("roc_bert", "RoCBertForMaskedLM"),
("roformer", "RoFormerForMaskedLM"),
("rwkv", "RwkvForCausalLM"),
("speech_to_text", "Speech2TextForConditionalGeneration"),
("squeezebert", "SqueezeBertForMaskedLM"),
("switch_transformers", "SwitchTransformersForConditionalGeneration"),
("t5", "T5ForConditionalGeneration"),
("tapas", "TapasForMaskedLM"),
("transfo-xl", "TransfoXLLMHeadModel"),
("wav2vec2", "Wav2Vec2ForMaskedLM"),
("whisper", "WhisperForConditionalGeneration"),
("xlm", "XLMWithLMHeadModel"),
("xlm-roberta", "XLMRobertaForMaskedLM"),
("xlm-roberta-xl", "XLMRobertaXLForMaskedLM"),
("xlnet", "XLNetLMHeadModel"),
("xmod", "XmodForMaskedLM"),
("yoso", "YosoForMaskedLM"),
]
)
MODEL_FOR_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Causal LM mapping
("bart", "BartForCausalLM"),
("bert", "BertLMHeadModel"),
("bert-generation", "BertGenerationDecoder"),
("big_bird", "BigBirdForCausalLM"),
("bigbird_pegasus", "BigBirdPegasusForCausalLM"),
("biogpt", "BioGptForCausalLM"),
("blenderbot", "BlenderbotForCausalLM"),
("blenderbot-small", "BlenderbotSmallForCausalLM"),
("bloom", "BloomForCausalLM"),
("camembert", "CamembertForCausalLM"),
("code_llama", "LlamaForCausalLM"),
("codegen", "CodeGenForCausalLM"),
("cpmant", "CpmAntForCausalLM"),
("ctrl", "CTRLLMHeadModel"),
("data2vec-text", "Data2VecTextForCausalLM"),
("electra", "ElectraForCausalLM"),
("ernie", "ErnieForCausalLM"),
("falcon", "FalconForCausalLM"),
("fuyu", "FuyuForCausalLM"),
("git", "GitForCausalLM"),
("gpt-sw3", "GPT2LMHeadModel"),
("gpt2", "GPT2LMHeadModel"),
("gpt_bigcode", "GPTBigCodeForCausalLM"),
("gpt_neo", "GPTNeoForCausalLM"),
("gpt_neox", "GPTNeoXForCausalLM"),
("gpt_neox_japanese", "GPTNeoXJapaneseForCausalLM"),
("gptj", "GPTJForCausalLM"),
("llama", "LlamaForCausalLM"),
("marian", "MarianForCausalLM"),
("mbart", "MBartForCausalLM"),
("mega", "MegaForCausalLM"),
("megatron-bert", "MegatronBertForCausalLM"),
("mistral", "MistralForCausalLM"),
("mpt", "MptForCausalLM"),
("musicgen", "MusicgenForCausalLM"),
("mvp", "MvpForCausalLM"),
("open-llama", "OpenLlamaForCausalLM"),
("openai-gpt", "OpenAIGPTLMHeadModel"),
("opt", "OPTForCausalLM"),
("pegasus", "PegasusForCausalLM"),
("persimmon", "PersimmonForCausalLM"),
("phi", "PhiForCausalLM"),
("plbart", "PLBartForCausalLM"),
("prophetnet", "ProphetNetForCausalLM"),
("qdqbert", "QDQBertLMHeadModel"),
("reformer", "ReformerModelWithLMHead"),
("rembert", "RemBertForCausalLM"),
("roberta", "RobertaForCausalLM"),
("roberta-prelayernorm", "RobertaPreLayerNormForCausalLM"),
("roc_bert", "RoCBertForCausalLM"),
("roformer", "RoFormerForCausalLM"),
("rwkv", "RwkvForCausalLM"),
("speech_to_text_2", "Speech2Text2ForCausalLM"),
("transfo-xl", "TransfoXLLMHeadModel"),
("trocr", "TrOCRForCausalLM"),
("whisper", "WhisperForCausalLM"),
("xglm", "XGLMForCausalLM"),
("xlm", "XLMWithLMHeadModel"),
("xlm-prophetnet", "XLMProphetNetForCausalLM"),
("xlm-roberta", "XLMRobertaForCausalLM"),
("xlm-roberta-xl", "XLMRobertaXLForCausalLM"),
("xlnet", "XLNetLMHeadModel"),
("xmod", "XmodForCausalLM"),
]
)
MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING_NAMES = OrderedDict(
[
("deit", "DeiTForMaskedImageModeling"),
("focalnet", "FocalNetForMaskedImageModeling"),
("swin", "SwinForMaskedImageModeling"),
("swinv2", "Swinv2ForMaskedImageModeling"),
("vit", "ViTForMaskedImageModeling"),
]
)
MODEL_FOR_CAUSAL_IMAGE_MODELING_MAPPING_NAMES = OrderedDict(
# Model for Causal Image Modeling mapping
[
("imagegpt", "ImageGPTForCausalImageModeling"),
]
)
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Image Classification mapping
("beit", "BeitForImageClassification"),
("bit", "BitForImageClassification"),
("convnext", "ConvNextForImageClassification"),
("convnextv2", "ConvNextV2ForImageClassification"),
("cvt", "CvtForImageClassification"),
("data2vec-vision", "Data2VecVisionForImageClassification"),
(
"deit",
("DeiTForImageClassification", "DeiTForImageClassificationWithTeacher"),
),
("dinat", "DinatForImageClassification"),
("dinov2", "Dinov2ForImageClassification"),
(
"efficientformer",
(
"EfficientFormerForImageClassification",
"EfficientFormerForImageClassificationWithTeacher",
),
),
("efficientnet", "EfficientNetForImageClassification"),
("focalnet", "FocalNetForImageClassification"),
("imagegpt", "ImageGPTForImageClassification"),
(
"levit",
("LevitForImageClassification", "LevitForImageClassificationWithTeacher"),
),
("mobilenet_v1", "MobileNetV1ForImageClassification"),
("mobilenet_v2", "MobileNetV2ForImageClassification"),
("mobilevit", "MobileViTForImageClassification"),
("mobilevitv2", "MobileViTV2ForImageClassification"),
("nat", "NatForImageClassification"),
(
"perceiver",
(
"PerceiverForImageClassificationLearned",
"PerceiverForImageClassificationFourier",
"PerceiverForImageClassificationConvProcessing",
),
),
("poolformer", "PoolFormerForImageClassification"),
("pvt", "PvtForImageClassification"),
("regnet", "RegNetForImageClassification"),
("resnet", "ResNetForImageClassification"),
("segformer", "SegformerForImageClassification"),
("swiftformer", "SwiftFormerForImageClassification"),
("swin", "SwinForImageClassification"),
("swinv2", "Swinv2ForImageClassification"),
("van", "VanForImageClassification"),
("vit", "ViTForImageClassification"),
("vit_hybrid", "ViTHybridForImageClassification"),
("vit_msn", "ViTMSNForImageClassification"),
]
)
MODEL_FOR_IMAGE_SEGMENTATION_MAPPING_NAMES = OrderedDict(
[
# Do not add new models here, this class will be deprecated in the future.
# Model for Image Segmentation mapping
("detr", "DetrForSegmentation"),
]
)
MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING_NAMES = OrderedDict(
[
# Model for Semantic Segmentation mapping
("beit", "BeitForSemanticSegmentation"),
("data2vec-vision", "Data2VecVisionForSemanticSegmentation"),
("dpt", "DPTForSemanticSegmentation"),
("mobilenet_v2", "MobileNetV2ForSemanticSegmentation"),
("mobilevit", "MobileViTForSemanticSegmentation"),
("mobilevitv2", "MobileViTV2ForSemanticSegmentation"),
("segformer", "SegformerForSemanticSegmentation"),
("upernet", "UperNetForSemanticSegmentation"),
]
)
MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING_NAMES = OrderedDict(
[
# Model for Instance Segmentation mapping
# MaskFormerForInstanceSegmentation can be removed from this mapping in v5
("maskformer", "MaskFormerForInstanceSegmentation"),
]
)
MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING_NAMES = OrderedDict(
[
# Model for Universal Segmentation mapping
("detr", "DetrForSegmentation"),
("mask2former", "Mask2FormerForUniversalSegmentation"),
("maskformer", "MaskFormerForInstanceSegmentation"),
("oneformer", "OneFormerForUniversalSegmentation"),
]
)
MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
("timesformer", "TimesformerForVideoClassification"),
("videomae", "VideoMAEForVideoClassification"),
("vivit", "VivitForVideoClassification"),
]
)
MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("blip", "BlipForConditionalGeneration"),
("blip-2", "Blip2ForConditionalGeneration"),
("git", "GitForCausalLM"),
("instructblip", "InstructBlipForConditionalGeneration"),
("kosmos-2", "Kosmos2ForConditionalGeneration"),
("llava", "LlavaForConditionalGeneration"),
("pix2struct", "Pix2StructForConditionalGeneration"),
("vision-encoder-decoder", "VisionEncoderDecoderModel"),
]
)
MODEL_FOR_MASKED_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Masked LM mapping
("albert", "AlbertForMaskedLM"),
("bart", "BartForConditionalGeneration"),
("bert", "BertForMaskedLM"),
("big_bird", "BigBirdForMaskedLM"),
("camembert", "CamembertForMaskedLM"),
("convbert", "ConvBertForMaskedLM"),
("data2vec-text", "Data2VecTextForMaskedLM"),
("deberta", "DebertaForMaskedLM"),
("deberta-v2", "DebertaV2ForMaskedLM"),
("distilbert", "DistilBertForMaskedLM"),
("electra", "ElectraForMaskedLM"),
("ernie", "ErnieForMaskedLM"),
("esm", "EsmForMaskedLM"),
("flaubert", "FlaubertWithLMHeadModel"),
("fnet", "FNetForMaskedLM"),
("funnel", "FunnelForMaskedLM"),
("ibert", "IBertForMaskedLM"),
("layoutlm", "LayoutLMForMaskedLM"),
("longformer", "LongformerForMaskedLM"),
("luke", "LukeForMaskedLM"),
("mbart", "MBartForConditionalGeneration"),
("mega", "MegaForMaskedLM"),
("megatron-bert", "MegatronBertForMaskedLM"),
("mobilebert", "MobileBertForMaskedLM"),
("mpnet", "MPNetForMaskedLM"),
("mra", "MraForMaskedLM"),
("mvp", "MvpForConditionalGeneration"),
("nezha", "NezhaForMaskedLM"),
("nystromformer", "NystromformerForMaskedLM"),
("perceiver", "PerceiverForMaskedLM"),
("qdqbert", "QDQBertForMaskedLM"),
("reformer", "ReformerForMaskedLM"),
("rembert", "RemBertForMaskedLM"),
("roberta", "RobertaForMaskedLM"),
("roberta-prelayernorm", "RobertaPreLayerNormForMaskedLM"),
("roc_bert", "RoCBertForMaskedLM"),
("roformer", "RoFormerForMaskedLM"),
("squeezebert", "SqueezeBertForMaskedLM"),
("tapas", "TapasForMaskedLM"),
("wav2vec2", "Wav2Vec2ForMaskedLM"),
("xlm", "XLMWithLMHeadModel"),
("xlm-roberta", "XLMRobertaForMaskedLM"),
("xlm-roberta-xl", "XLMRobertaXLForMaskedLM"),
("xmod", "XmodForMaskedLM"),
("yoso", "YosoForMaskedLM"),
]
)
MODEL_FOR_OBJECT_DETECTION_MAPPING_NAMES = OrderedDict(
[
# Model for Object Detection mapping
("conditional_detr", "ConditionalDetrForObjectDetection"),
("deformable_detr", "DeformableDetrForObjectDetection"),
("deta", "DetaForObjectDetection"),
("detr", "DetrForObjectDetection"),
("table-transformer", "TableTransformerForObjectDetection"),
("yolos", "YolosForObjectDetection"),
]
)
MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING_NAMES = OrderedDict(
[
# Model for Zero Shot Object Detection mapping
("owlv2", "Owlv2ForObjectDetection"),
("owlvit", "OwlViTForObjectDetection"),
]
)
MODEL_FOR_DEPTH_ESTIMATION_MAPPING_NAMES = OrderedDict(
[
# Model for depth estimation mapping
("dpt", "DPTForDepthEstimation"),
("glpn", "GLPNForDepthEstimation"),
]
)
MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES = OrderedDict(
[
# Model for Seq2Seq Causal LM mapping
("bart", "BartForConditionalGeneration"),
("bigbird_pegasus", "BigBirdPegasusForConditionalGeneration"),
("blenderbot", "BlenderbotForConditionalGeneration"),
("blenderbot-small", "BlenderbotSmallForConditionalGeneration"),
("encoder-decoder", "EncoderDecoderModel"),
("fsmt", "FSMTForConditionalGeneration"),
("gptsan-japanese", "GPTSanJapaneseForConditionalGeneration"),
("led", "LEDForConditionalGeneration"),
("longt5", "LongT5ForConditionalGeneration"),
("m2m_100", "M2M100ForConditionalGeneration"),
("marian", "MarianMTModel"),
("mbart", "MBartForConditionalGeneration"),
("mt5", "MT5ForConditionalGeneration"),
("mvp", "MvpForConditionalGeneration"),
("nllb-moe", "NllbMoeForConditionalGeneration"),
("pegasus", "PegasusForConditionalGeneration"),
("pegasus_x", "PegasusXForConditionalGeneration"),
("plbart", "PLBartForConditionalGeneration"),
("prophetnet", "ProphetNetForConditionalGeneration"),
("seamless_m4t", "SeamlessM4TForTextToText"),
("seamless_m4t_v2", "SeamlessM4Tv2ForTextToText"),
("switch_transformers", "SwitchTransformersForConditionalGeneration"),
("t5", "T5ForConditionalGeneration"),
("umt5", "UMT5ForConditionalGeneration"),
("xlm-prophetnet", "XLMProphetNetForConditionalGeneration"),
]
)
MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES = OrderedDict(
[
("pop2piano", "Pop2PianoForConditionalGeneration"),
("seamless_m4t", "SeamlessM4TForSpeechToText"),
("seamless_m4t_v2", "SeamlessM4Tv2ForSpeechToText"),
("speech-encoder-decoder", "SpeechEncoderDecoderModel"),
("speech_to_text", "Speech2TextForConditionalGeneration"),
("speecht5", "SpeechT5ForSpeechToText"),
("whisper", "WhisperForConditionalGeneration"),
]
)
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Sequence Classification mapping
("albert", "AlbertForSequenceClassification"),
("bart", "BartForSequenceClassification"),
("bert", "BertForSequenceClassification"),
("big_bird", "BigBirdForSequenceClassification"),
("bigbird_pegasus", "BigBirdPegasusForSequenceClassification"),
("biogpt", "BioGptForSequenceClassification"),
("bloom", "BloomForSequenceClassification"),
("camembert", "CamembertForSequenceClassification"),
("canine", "CanineForSequenceClassification"),
("code_llama", "LlamaForSequenceClassification"),
("convbert", "ConvBertForSequenceClassification"),
("ctrl", "CTRLForSequenceClassification"),
("data2vec-text", "Data2VecTextForSequenceClassification"),
("deberta", "DebertaForSequenceClassification"),
("deberta-v2", "DebertaV2ForSequenceClassification"),
("distilbert", "DistilBertForSequenceClassification"),
("electra", "ElectraForSequenceClassification"),
("ernie", "ErnieForSequenceClassification"),
("ernie_m", "ErnieMForSequenceClassification"),
("esm", "EsmForSequenceClassification"),
("falcon", "FalconForSequenceClassification"),
("flaubert", "FlaubertForSequenceClassification"),
("fnet", "FNetForSequenceClassification"),
("funnel", "FunnelForSequenceClassification"),
("gpt-sw3", "GPT2ForSequenceClassification"),
("gpt2", "GPT2ForSequenceClassification"),
("gpt_bigcode", "GPTBigCodeForSequenceClassification"),
("gpt_neo", "GPTNeoForSequenceClassification"),
("gpt_neox", "GPTNeoXForSequenceClassification"),
("gptj", "GPTJForSequenceClassification"),
("ibert", "IBertForSequenceClassification"),
("layoutlm", "LayoutLMForSequenceClassification"),
("layoutlmv2", "LayoutLMv2ForSequenceClassification"),
("layoutlmv3", "LayoutLMv3ForSequenceClassification"),
("led", "LEDForSequenceClassification"),
("lilt", "LiltForSequenceClassification"),
("llama", "LlamaForSequenceClassification"),
("longformer", "LongformerForSequenceClassification"),
("luke", "LukeForSequenceClassification"),
("markuplm", "MarkupLMForSequenceClassification"),
("mbart", "MBartForSequenceClassification"),
("mega", "MegaForSequenceClassification"),
("megatron-bert", "MegatronBertForSequenceClassification"),
("mistral", "MistralForSequenceClassification"),
("mobilebert", "MobileBertForSequenceClassification"),
("mpnet", "MPNetForSequenceClassification"),
("mpt", "MptForSequenceClassification"),
("mra", "MraForSequenceClassification"),
("mt5", "MT5ForSequenceClassification"),
("mvp", "MvpForSequenceClassification"),
("nezha", "NezhaForSequenceClassification"),
("nystromformer", "NystromformerForSequenceClassification"),
("open-llama", "OpenLlamaForSequenceClassification"),
("openai-gpt", "OpenAIGPTForSequenceClassification"),
("opt", "OPTForSequenceClassification"),
("perceiver", "PerceiverForSequenceClassification"),
("persimmon", "PersimmonForSequenceClassification"),
("phi", "PhiForSequenceClassification"),
("plbart", "PLBartForSequenceClassification"),
("qdqbert", "QDQBertForSequenceClassification"),
("reformer", "ReformerForSequenceClassification"),
("rembert", "RemBertForSequenceClassification"),
("roberta", "RobertaForSequenceClassification"),
("roberta-prelayernorm", "RobertaPreLayerNormForSequenceClassification"),
("roc_bert", "RoCBertForSequenceClassification"),
("roformer", "RoFormerForSequenceClassification"),
("squeezebert", "SqueezeBertForSequenceClassification"),
("t5", "T5ForSequenceClassification"),
("tapas", "TapasForSequenceClassification"),
("transfo-xl", "TransfoXLForSequenceClassification"),
("umt5", "UMT5ForSequenceClassification"),
("xlm", "XLMForSequenceClassification"),
("xlm-roberta", "XLMRobertaForSequenceClassification"),
("xlm-roberta-xl", "XLMRobertaXLForSequenceClassification"),
("xlnet", "XLNetForSequenceClassification"),
("xmod", "XmodForSequenceClassification"),
("yoso", "YosoForSequenceClassification"),
]
)
MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
# Model for Question Answering mapping
("albert", "AlbertForQuestionAnswering"),
("bart", "BartForQuestionAnswering"),
("bert", "BertForQuestionAnswering"),
("big_bird", "BigBirdForQuestionAnswering"),
("bigbird_pegasus", "BigBirdPegasusForQuestionAnswering"),
("bloom", "BloomForQuestionAnswering"),
("camembert", "CamembertForQuestionAnswering"),
("canine", "CanineForQuestionAnswering"),
("convbert", "ConvBertForQuestionAnswering"),
("data2vec-text", "Data2VecTextForQuestionAnswering"),
("deberta", "DebertaForQuestionAnswering"),
("deberta-v2", "DebertaV2ForQuestionAnswering"),
("distilbert", "DistilBertForQuestionAnswering"),
("electra", "ElectraForQuestionAnswering"),
("ernie", "ErnieForQuestionAnswering"),
("ernie_m", "ErnieMForQuestionAnswering"),
("falcon", "FalconForQuestionAnswering"),
("flaubert", "FlaubertForQuestionAnsweringSimple"),
("fnet", "FNetForQuestionAnswering"),
("funnel", "FunnelForQuestionAnswering"),
("gpt2", "GPT2ForQuestionAnswering"),
("gpt_neo", "GPTNeoForQuestionAnswering"),
("gpt_neox", "GPTNeoXForQuestionAnswering"),
("gptj", "GPTJForQuestionAnswering"),
("ibert", "IBertForQuestionAnswering"),
("layoutlmv2", "LayoutLMv2ForQuestionAnswering"),
("layoutlmv3", "LayoutLMv3ForQuestionAnswering"),
("led", "LEDForQuestionAnswering"),
("lilt", "LiltForQuestionAnswering"),
("longformer", "LongformerForQuestionAnswering"),
("luke", "LukeForQuestionAnswering"),
("lxmert", "LxmertForQuestionAnswering"),
("markuplm", "MarkupLMForQuestionAnswering"),
("mbart", "MBartForQuestionAnswering"),
("mega", "MegaForQuestionAnswering"),
("megatron-bert", "MegatronBertForQuestionAnswering"),
("mobilebert", "MobileBertForQuestionAnswering"),
("mpnet", "MPNetForQuestionAnswering"),
("mpt", "MptForQuestionAnswering"),
("mra", "MraForQuestionAnswering"),
("mt5", "MT5ForQuestionAnswering"),
("mvp", "MvpForQuestionAnswering"),
("nezha", "NezhaForQuestionAnswering"),
("nystromformer", "NystromformerForQuestionAnswering"),
("opt", "OPTForQuestionAnswering"),
("qdqbert", "QDQBertForQuestionAnswering"),
("reformer", "ReformerForQuestionAnswering"),
("rembert", "RemBertForQuestionAnswering"),
("roberta", "RobertaForQuestionAnswering"),
("roberta-prelayernorm", "RobertaPreLayerNormForQuestionAnswering"),
("roc_bert", "RoCBertForQuestionAnswering"),
("roformer", "RoFormerForQuestionAnswering"),
("splinter", "SplinterForQuestionAnswering"),
("squeezebert", "SqueezeBertForQuestionAnswering"),
("t5", "T5ForQuestionAnswering"),
("umt5", "UMT5ForQuestionAnswering"),
("xlm", "XLMForQuestionAnsweringSimple"),
("xlm-roberta", "XLMRobertaForQuestionAnswering"),
("xlm-roberta-xl", "XLMRobertaXLForQuestionAnswering"),
("xlnet", "XLNetForQuestionAnsweringSimple"),
("xmod", "XmodForQuestionAnswering"),
("yoso", "YosoForQuestionAnswering"),
]
)
MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
# Model for Table Question Answering mapping
("tapas", "TapasForQuestionAnswering"),
]
)
MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
("blip-2", "Blip2ForConditionalGeneration"),
("vilt", "ViltForQuestionAnswering"),
]
)
MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING_NAMES = OrderedDict(
[
("layoutlm", "LayoutLMForQuestionAnswering"),
("layoutlmv2", "LayoutLMv2ForQuestionAnswering"),
("layoutlmv3", "LayoutLMv3ForQuestionAnswering"),
]
)
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Token Classification mapping
("albert", "AlbertForTokenClassification"),
("bert", "BertForTokenClassification"),
("big_bird", "BigBirdForTokenClassification"),
("biogpt", "BioGptForTokenClassification"),
("bloom", "BloomForTokenClassification"),
("bros", "BrosForTokenClassification"),
("camembert", "CamembertForTokenClassification"),
("canine", "CanineForTokenClassification"),
("convbert", "ConvBertForTokenClassification"),
("data2vec-text", "Data2VecTextForTokenClassification"),
("deberta", "DebertaForTokenClassification"),
("deberta-v2", "DebertaV2ForTokenClassification"),
("distilbert", "DistilBertForTokenClassification"),
("electra", "ElectraForTokenClassification"),
("ernie", "ErnieForTokenClassification"),
("ernie_m", "ErnieMForTokenClassification"),
("esm", "EsmForTokenClassification"),
("falcon", "FalconForTokenClassification"),
("flaubert", "FlaubertForTokenClassification"),
("fnet", "FNetForTokenClassification"),
("funnel", "FunnelForTokenClassification"),
("gpt-sw3", "GPT2ForTokenClassification"),
("gpt2", "GPT2ForTokenClassification"),
("gpt_bigcode", "GPTBigCodeForTokenClassification"),
("gpt_neo", "GPTNeoForTokenClassification"),
("gpt_neox", "GPTNeoXForTokenClassification"),
("ibert", "IBertForTokenClassification"),
("layoutlm", "LayoutLMForTokenClassification"),
("layoutlmv2", "LayoutLMv2ForTokenClassification"),
("layoutlmv3", "LayoutLMv3ForTokenClassification"),
("lilt", "LiltForTokenClassification"),
("longformer", "LongformerForTokenClassification"),
("luke", "LukeForTokenClassification"),
("markuplm", "MarkupLMForTokenClassification"),
("mega", "MegaForTokenClassification"),
("megatron-bert", "MegatronBertForTokenClassification"),
("mobilebert", "MobileBertForTokenClassification"),
("mpnet", "MPNetForTokenClassification"),
("mpt", "MptForTokenClassification"),
("mra", "MraForTokenClassification"),
("nezha", "NezhaForTokenClassification"),
("nystromformer", "NystromformerForTokenClassification"),
("phi", "PhiForTokenClassification"),
("qdqbert", "QDQBertForTokenClassification"),
("rembert", "RemBertForTokenClassification"),
("roberta", "RobertaForTokenClassification"),
("roberta-prelayernorm", "RobertaPreLayerNormForTokenClassification"),
("roc_bert", "RoCBertForTokenClassification"),
("roformer", "RoFormerForTokenClassification"),
("squeezebert", "SqueezeBertForTokenClassification"),
("xlm", "XLMForTokenClassification"),
("xlm-roberta", "XLMRobertaForTokenClassification"),
("xlm-roberta-xl", "XLMRobertaXLForTokenClassification"),
("xlnet", "XLNetForTokenClassification"),
("xmod", "XmodForTokenClassification"),
("yoso", "YosoForTokenClassification"),
]
)
MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES = OrderedDict(
[
# Model for Multiple Choice mapping
("albert", "AlbertForMultipleChoice"),
("bert", "BertForMultipleChoice"),
("big_bird", "BigBirdForMultipleChoice"),
("camembert", "CamembertForMultipleChoice"),
("canine", "CanineForMultipleChoice"),
("convbert", "ConvBertForMultipleChoice"),
("data2vec-text", "Data2VecTextForMultipleChoice"),
("deberta-v2", "DebertaV2ForMultipleChoice"),
("distilbert", "DistilBertForMultipleChoice"),
("electra", "ElectraForMultipleChoice"),
("ernie", "ErnieForMultipleChoice"),
("ernie_m", "ErnieMForMultipleChoice"),
("flaubert", "FlaubertForMultipleChoice"),
("fnet", "FNetForMultipleChoice"),
("funnel", "FunnelForMultipleChoice"),
("ibert", "IBertForMultipleChoice"),
("longformer", "LongformerForMultipleChoice"),
("luke", "LukeForMultipleChoice"),
("mega", "MegaForMultipleChoice"),
("megatron-bert", "MegatronBertForMultipleChoice"),
("mobilebert", "MobileBertForMultipleChoice"),
("mpnet", "MPNetForMultipleChoice"),
("mra", "MraForMultipleChoice"),
("nezha", "NezhaForMultipleChoice"),
("nystromformer", "NystromformerForMultipleChoice"),
("qdqbert", "QDQBertForMultipleChoice"),
("rembert", "RemBertForMultipleChoice"),
("roberta", "RobertaForMultipleChoice"),
("roberta-prelayernorm", "RobertaPreLayerNormForMultipleChoice"),
("roc_bert", "RoCBertForMultipleChoice"),
("roformer", "RoFormerForMultipleChoice"),
("squeezebert", "SqueezeBertForMultipleChoice"),
("xlm", "XLMForMultipleChoice"),
("xlm-roberta", "XLMRobertaForMultipleChoice"),
("xlm-roberta-xl", "XLMRobertaXLForMultipleChoice"),
("xlnet", "XLNetForMultipleChoice"),
("xmod", "XmodForMultipleChoice"),
("yoso", "YosoForMultipleChoice"),
]
)
MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES = OrderedDict(
[
("bert", "BertForNextSentencePrediction"),
("ernie", "ErnieForNextSentencePrediction"),
("fnet", "FNetForNextSentencePrediction"),
("megatron-bert", "MegatronBertForNextSentencePrediction"),
("mobilebert", "MobileBertForNextSentencePrediction"),
("nezha", "NezhaForNextSentencePrediction"),
("qdqbert", "QDQBertForNextSentencePrediction"),
]
)
MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Audio Classification mapping
("audio-spectrogram-transformer", "ASTForAudioClassification"),
("data2vec-audio", "Data2VecAudioForSequenceClassification"),
("hubert", "HubertForSequenceClassification"),
("sew", "SEWForSequenceClassification"),
("sew-d", "SEWDForSequenceClassification"),
("unispeech", "UniSpeechForSequenceClassification"),
("unispeech-sat", "UniSpeechSatForSequenceClassification"),
("wav2vec2", "Wav2Vec2ForSequenceClassification"),
("wav2vec2-conformer", "Wav2Vec2ConformerForSequenceClassification"),
("wavlm", "WavLMForSequenceClassification"),
("whisper", "WhisperForAudioClassification"),
]
)
MODEL_FOR_CTC_MAPPING_NAMES = OrderedDict(
[
# Model for Connectionist temporal classification (CTC) mapping
("data2vec-audio", "Data2VecAudioForCTC"),
("hubert", "HubertForCTC"),
("mctct", "MCTCTForCTC"),
("sew", "SEWForCTC"),
("sew-d", "SEWDForCTC"),
("unispeech", "UniSpeechForCTC"),
("unispeech-sat", "UniSpeechSatForCTC"),
("wav2vec2", "Wav2Vec2ForCTC"),
("wav2vec2-conformer", "Wav2Vec2ConformerForCTC"),
("wavlm", "WavLMForCTC"),
]
)
MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Audio Classification mapping
("data2vec-audio", "Data2VecAudioForAudioFrameClassification"),
("unispeech-sat", "UniSpeechSatForAudioFrameClassification"),
("wav2vec2", "Wav2Vec2ForAudioFrameClassification"),
("wav2vec2-conformer", "Wav2Vec2ConformerForAudioFrameClassification"),
("wavlm", "WavLMForAudioFrameClassification"),
]
)
MODEL_FOR_AUDIO_XVECTOR_MAPPING_NAMES = OrderedDict(
[
# Model for Audio Classification mapping
("data2vec-audio", "Data2VecAudioForXVector"),
("unispeech-sat", "UniSpeechSatForXVector"),
("wav2vec2", "Wav2Vec2ForXVector"),
("wav2vec2-conformer", "Wav2Vec2ConformerForXVector"),
("wavlm", "WavLMForXVector"),
]
)
MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING_NAMES = OrderedDict(
[
# Model for Text-To-Spectrogram mapping
("speecht5", "SpeechT5ForTextToSpeech"),
]
)
MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING_NAMES = OrderedDict(
[
# Model for Text-To-Waveform mapping
("bark", "BarkModel"),
("musicgen", "MusicgenForConditionalGeneration"),
("seamless_m4t", "SeamlessM4TForTextToSpeech"),
("seamless_m4t_v2", "SeamlessM4Tv2ForTextToSpeech"),
("vits", "VitsModel"),
]
)
MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
# Model for Zero Shot Image Classification mapping
("align", "AlignModel"),
("altclip", "AltCLIPModel"),
("blip", "BlipModel"),
("chinese_clip", "ChineseCLIPModel"),
("clip", "CLIPModel"),
("clipseg", "CLIPSegModel"),
]
)
MODEL_FOR_BACKBONE_MAPPING_NAMES = OrderedDict(
[
# Backbone mapping
("beit", "BeitBackbone"),
("bit", "BitBackbone"),
("convnext", "ConvNextBackbone"),
("convnextv2", "ConvNextV2Backbone"),
("dinat", "DinatBackbone"),
("dinov2", "Dinov2Backbone"),
("focalnet", "FocalNetBackbone"),
("maskformer-swin", "MaskFormerSwinBackbone"),
("nat", "NatBackbone"),
("resnet", "ResNetBackbone"),
("swin", "SwinBackbone"),
("timm_backbone", "TimmBackbone"),
("vitdet", "VitDetBackbone"),
]
)
MODEL_FOR_MASK_GENERATION_MAPPING_NAMES = OrderedDict(
[
("sam", "SamModel"),
]
)
MODEL_FOR_TEXT_ENCODING_MAPPING_NAMES = OrderedDict(
[
("albert", "AlbertModel"),
("bert", "BertModel"),
("big_bird", "BigBirdModel"),
("data2vec-text", "Data2VecTextModel"),
("deberta", "DebertaModel"),
("deberta-v2", "DebertaV2Model"),
("distilbert", "DistilBertModel"),
("electra", "ElectraModel"),
("flaubert", "FlaubertModel"),
("ibert", "IBertModel"),
("longformer", "LongformerModel"),
("mobilebert", "MobileBertModel"),
("mt5", "MT5EncoderModel"),
("nystromformer", "NystromformerModel"),
("reformer", "ReformerModel"),
("rembert", "RemBertModel"),
("roberta", "RobertaModel"),
("roberta-prelayernorm", "RobertaPreLayerNormModel"),
("roc_bert", "RoCBertModel"),
("roformer", "RoFormerModel"),
("squeezebert", "SqueezeBertModel"),
("t5", "T5EncoderModel"),
("umt5", "UMT5EncoderModel"),
("xlm", "XLMModel"),
("xlm-roberta", "XLMRobertaModel"),
("xlm-roberta-xl", "XLMRobertaXLModel"),
]
)
MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING_NAMES = OrderedDict(
[
("patchtsmixer", "PatchTSMixerForTimeSeriesClassification"),
("patchtst", "PatchTSTForClassification"),
]
)
MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING_NAMES = OrderedDict(
[
("patchtsmixer", "PatchTSMixerForRegression"),
("patchtst", "PatchTSTForRegression"),
]
)
MODEL_FOR_IMAGE_TO_IMAGE_MAPPING_NAMES = OrderedDict(
[
("swin2sr", "Swin2SRForImageSuperResolution"),
]
)
MODEL_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_MAPPING_NAMES)
MODEL_FOR_PRETRAINING_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_PRETRAINING_MAPPING_NAMES)
MODEL_WITH_LM_HEAD_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_WITH_LM_HEAD_MAPPING_NAMES)
MODEL_FOR_CAUSAL_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_CAUSAL_LM_MAPPING_NAMES)
MODEL_FOR_CAUSAL_IMAGE_MODELING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_CAUSAL_IMAGE_MODELING_MAPPING_NAMES
)
MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_IMAGE_SEGMENTATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_IMAGE_SEGMENTATION_MAPPING_NAMES
)
MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING_NAMES
)
MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING_NAMES
)
MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING_NAMES
)
MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_VISION_2_SEQ_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_VISION_2_SEQ_MAPPING_NAMES)
MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING_NAMES
)
MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING_NAMES
)
MODEL_FOR_MASKED_LM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_MASKED_LM_MAPPING_NAMES)
MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING_NAMES
)
MODEL_FOR_OBJECT_DETECTION_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_OBJECT_DETECTION_MAPPING_NAMES)
MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING_NAMES
)
MODEL_FOR_DEPTH_ESTIMATION_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_DEPTH_ESTIMATION_MAPPING_NAMES)
MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING_NAMES
)
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_QUESTION_ANSWERING_MAPPING_NAMES
)
MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING_NAMES
)
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_MULTIPLE_CHOICE_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_MULTIPLE_CHOICE_MAPPING_NAMES)
MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING_NAMES
)
MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_CTC_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_CTC_MAPPING_NAMES)
MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING_NAMES)
MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_AUDIO_XVECTOR_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_AUDIO_XVECTOR_MAPPING_NAMES)
MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING_NAMES
)
MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING_NAMES)
MODEL_FOR_BACKBONE_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_BACKBONE_MAPPING_NAMES)
MODEL_FOR_MASK_GENERATION_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_MASK_GENERATION_MAPPING_NAMES)
MODEL_FOR_TEXT_ENCODING_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_TEXT_ENCODING_MAPPING_NAMES)
MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING_NAMES
)
MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING = _LazyAutoMapping(
CONFIG_MAPPING_NAMES, MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING_NAMES
)
MODEL_FOR_IMAGE_TO_IMAGE_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, MODEL_FOR_IMAGE_TO_IMAGE_MAPPING_NAMES)
class AutoModelForMaskGeneration(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_MASK_GENERATION_MAPPING
class AutoModelForTextEncoding(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_TEXT_ENCODING_MAPPING
class AutoModelForImageToImage(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_IMAGE_TO_IMAGE_MAPPING
class AutoModel(_BaseAutoModelClass):
_model_mapping = MODEL_MAPPING
AutoModel = auto_class_update(AutoModel)
class AutoModelForPreTraining(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_PRETRAINING_MAPPING
AutoModelForPreTraining = auto_class_update(AutoModelForPreTraining, head_doc="pretraining")
# Private on purpose, the public class will add the deprecation warnings.
class _AutoModelWithLMHead(_BaseAutoModelClass):
_model_mapping = MODEL_WITH_LM_HEAD_MAPPING
_AutoModelWithLMHead = auto_class_update(_AutoModelWithLMHead, head_doc="language modeling")
class AutoModelForCausalLM(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_CAUSAL_LM_MAPPING
AutoModelForCausalLM = auto_class_update(AutoModelForCausalLM, head_doc="causal language modeling")
class AutoModelForMaskedLM(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_MASKED_LM_MAPPING
AutoModelForMaskedLM = auto_class_update(AutoModelForMaskedLM, head_doc="masked language modeling")
class AutoModelForSeq2SeqLM(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_SEQ_TO_SEQ_CAUSAL_LM_MAPPING
AutoModelForSeq2SeqLM = auto_class_update(
AutoModelForSeq2SeqLM,
head_doc="sequence-to-sequence language modeling",
checkpoint_for_example="t5-base",
)
class AutoModelForSequenceClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING
AutoModelForSequenceClassification = auto_class_update(
AutoModelForSequenceClassification, head_doc="sequence classification"
)
class AutoModelForQuestionAnswering(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_QUESTION_ANSWERING_MAPPING
AutoModelForQuestionAnswering = auto_class_update(AutoModelForQuestionAnswering, head_doc="question answering")
class AutoModelForTableQuestionAnswering(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_TABLE_QUESTION_ANSWERING_MAPPING
AutoModelForTableQuestionAnswering = auto_class_update(
AutoModelForTableQuestionAnswering,
head_doc="table question answering",
checkpoint_for_example="google/tapas-base-finetuned-wtq",
)
class AutoModelForVisualQuestionAnswering(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_VISUAL_QUESTION_ANSWERING_MAPPING
AutoModelForVisualQuestionAnswering = auto_class_update(
AutoModelForVisualQuestionAnswering,
head_doc="visual question answering",
checkpoint_for_example="dandelin/vilt-b32-finetuned-vqa",
)
class AutoModelForDocumentQuestionAnswering(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_DOCUMENT_QUESTION_ANSWERING_MAPPING
AutoModelForDocumentQuestionAnswering = auto_class_update(
AutoModelForDocumentQuestionAnswering,
head_doc="document question answering",
checkpoint_for_example='impira/layoutlm-document-qa", revision="52e01b3',
)
class AutoModelForTokenClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING
AutoModelForTokenClassification = auto_class_update(AutoModelForTokenClassification, head_doc="token classification")
class AutoModelForMultipleChoice(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_MULTIPLE_CHOICE_MAPPING
AutoModelForMultipleChoice = auto_class_update(AutoModelForMultipleChoice, head_doc="multiple choice")
class AutoModelForNextSentencePrediction(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_NEXT_SENTENCE_PREDICTION_MAPPING
AutoModelForNextSentencePrediction = auto_class_update(
AutoModelForNextSentencePrediction, head_doc="next sentence prediction"
)
class AutoModelForImageClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_IMAGE_CLASSIFICATION_MAPPING
AutoModelForImageClassification = auto_class_update(AutoModelForImageClassification, head_doc="image classification")
class AutoModelForZeroShotImageClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_ZERO_SHOT_IMAGE_CLASSIFICATION_MAPPING
AutoModelForZeroShotImageClassification = auto_class_update(
AutoModelForZeroShotImageClassification, head_doc="zero-shot image classification"
)
class AutoModelForImageSegmentation(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_IMAGE_SEGMENTATION_MAPPING
AutoModelForImageSegmentation = auto_class_update(AutoModelForImageSegmentation, head_doc="image segmentation")
class AutoModelForSemanticSegmentation(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_SEMANTIC_SEGMENTATION_MAPPING
AutoModelForSemanticSegmentation = auto_class_update(
AutoModelForSemanticSegmentation, head_doc="semantic segmentation"
)
class AutoModelForUniversalSegmentation(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_UNIVERSAL_SEGMENTATION_MAPPING
AutoModelForUniversalSegmentation = auto_class_update(
AutoModelForUniversalSegmentation, head_doc="universal image segmentation"
)
class AutoModelForInstanceSegmentation(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_INSTANCE_SEGMENTATION_MAPPING
AutoModelForInstanceSegmentation = auto_class_update(
AutoModelForInstanceSegmentation, head_doc="instance segmentation"
)
class AutoModelForObjectDetection(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_OBJECT_DETECTION_MAPPING
AutoModelForObjectDetection = auto_class_update(AutoModelForObjectDetection, head_doc="object detection")
class AutoModelForZeroShotObjectDetection(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_ZERO_SHOT_OBJECT_DETECTION_MAPPING
AutoModelForZeroShotObjectDetection = auto_class_update(
AutoModelForZeroShotObjectDetection, head_doc="zero-shot object detection"
)
class AutoModelForDepthEstimation(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_DEPTH_ESTIMATION_MAPPING
AutoModelForDepthEstimation = auto_class_update(AutoModelForDepthEstimation, head_doc="depth estimation")
class AutoModelForVideoClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_VIDEO_CLASSIFICATION_MAPPING
AutoModelForVideoClassification = auto_class_update(AutoModelForVideoClassification, head_doc="video classification")
class AutoModelForVision2Seq(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_VISION_2_SEQ_MAPPING
AutoModelForVision2Seq = auto_class_update(AutoModelForVision2Seq, head_doc="vision-to-text modeling")
class AutoModelForAudioClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_AUDIO_CLASSIFICATION_MAPPING
AutoModelForAudioClassification = auto_class_update(AutoModelForAudioClassification, head_doc="audio classification")
class AutoModelForCTC(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_CTC_MAPPING
AutoModelForCTC = auto_class_update(AutoModelForCTC, head_doc="connectionist temporal classification")
class AutoModelForSpeechSeq2Seq(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_SPEECH_SEQ_2_SEQ_MAPPING
AutoModelForSpeechSeq2Seq = auto_class_update(
AutoModelForSpeechSeq2Seq, head_doc="sequence-to-sequence speech-to-text modeling"
)
class AutoModelForAudioFrameClassification(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_AUDIO_FRAME_CLASSIFICATION_MAPPING
AutoModelForAudioFrameClassification = auto_class_update(
AutoModelForAudioFrameClassification, head_doc="audio frame (token) classification"
)
class AutoModelForAudioXVector(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_AUDIO_XVECTOR_MAPPING
class AutoModelForTextToSpectrogram(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_TEXT_TO_SPECTROGRAM_MAPPING
class AutoModelForTextToWaveform(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_TEXT_TO_WAVEFORM_MAPPING
class AutoBackbone(_BaseAutoBackboneClass):
_model_mapping = MODEL_FOR_BACKBONE_MAPPING
AutoModelForAudioXVector = auto_class_update(AutoModelForAudioXVector, head_doc="audio retrieval via x-vector")
class AutoModelForMaskedImageModeling(_BaseAutoModelClass):
_model_mapping = MODEL_FOR_MASKED_IMAGE_MODELING_MAPPING
AutoModelForMaskedImageModeling = auto_class_update(AutoModelForMaskedImageModeling, head_doc="masked image modeling")
class AutoModelWithLMHead(_AutoModelWithLMHead):
@classmethod
def from_config(cls, config):
warnings.warn(
"The class `AutoModelWithLMHead` is deprecated and will be removed in a future version. Please use "
"`AutoModelForCausalLM` for causal language models, `AutoModelForMaskedLM` for masked language models and "
"`AutoModelForSeq2SeqLM` for encoder-decoder models.",
FutureWarning,
)
return super().from_config(config)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
warnings.warn(
"The class `AutoModelWithLMHead` is deprecated and will be removed in a future version. Please use "
"`AutoModelForCausalLM` for causal language models, `AutoModelForMaskedLM` for masked language models and "
"`AutoModelForSeq2SeqLM` for encoder-decoder models.",
FutureWarning,
)
return super().from_pretrained(pretrained_model_name_or_path, *model_args, **kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/feature_extraction_auto.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" AutoFeatureExtractor class."""
import importlib
import json
import os
import warnings
from collections import OrderedDict
from typing import Dict, Optional, Union
# Build the list of all feature extractors
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...feature_extraction_utils import FeatureExtractionMixin
from ...utils import CONFIG_NAME, FEATURE_EXTRACTOR_NAME, get_file_from_repo, logging
from .auto_factory import _LazyAutoMapping
from .configuration_auto import (
CONFIG_MAPPING_NAMES,
AutoConfig,
model_type_to_module_name,
replace_list_option_in_docstrings,
)
logger = logging.get_logger(__name__)
FEATURE_EXTRACTOR_MAPPING_NAMES = OrderedDict(
[
("audio-spectrogram-transformer", "ASTFeatureExtractor"),
("beit", "BeitFeatureExtractor"),
("chinese_clip", "ChineseCLIPFeatureExtractor"),
("clap", "ClapFeatureExtractor"),
("clip", "CLIPFeatureExtractor"),
("clipseg", "ViTFeatureExtractor"),
("clvp", "ClvpFeatureExtractor"),
("conditional_detr", "ConditionalDetrFeatureExtractor"),
("convnext", "ConvNextFeatureExtractor"),
("cvt", "ConvNextFeatureExtractor"),
("data2vec-audio", "Wav2Vec2FeatureExtractor"),
("data2vec-vision", "BeitFeatureExtractor"),
("deformable_detr", "DeformableDetrFeatureExtractor"),
("deit", "DeiTFeatureExtractor"),
("detr", "DetrFeatureExtractor"),
("dinat", "ViTFeatureExtractor"),
("donut-swin", "DonutFeatureExtractor"),
("dpt", "DPTFeatureExtractor"),
("encodec", "EncodecFeatureExtractor"),
("flava", "FlavaFeatureExtractor"),
("glpn", "GLPNFeatureExtractor"),
("groupvit", "CLIPFeatureExtractor"),
("hubert", "Wav2Vec2FeatureExtractor"),
("imagegpt", "ImageGPTFeatureExtractor"),
("layoutlmv2", "LayoutLMv2FeatureExtractor"),
("layoutlmv3", "LayoutLMv3FeatureExtractor"),
("levit", "LevitFeatureExtractor"),
("maskformer", "MaskFormerFeatureExtractor"),
("mctct", "MCTCTFeatureExtractor"),
("mobilenet_v1", "MobileNetV1FeatureExtractor"),
("mobilenet_v2", "MobileNetV2FeatureExtractor"),
("mobilevit", "MobileViTFeatureExtractor"),
("nat", "ViTFeatureExtractor"),
("owlvit", "OwlViTFeatureExtractor"),
("perceiver", "PerceiverFeatureExtractor"),
("poolformer", "PoolFormerFeatureExtractor"),
("pop2piano", "Pop2PianoFeatureExtractor"),
("regnet", "ConvNextFeatureExtractor"),
("resnet", "ConvNextFeatureExtractor"),
("seamless_m4t", "SeamlessM4TFeatureExtractor"),
("seamless_m4t_v2", "SeamlessM4TFeatureExtractor"),
("segformer", "SegformerFeatureExtractor"),
("sew", "Wav2Vec2FeatureExtractor"),
("sew-d", "Wav2Vec2FeatureExtractor"),
("speech_to_text", "Speech2TextFeatureExtractor"),
("speecht5", "SpeechT5FeatureExtractor"),
("swiftformer", "ViTFeatureExtractor"),
("swin", "ViTFeatureExtractor"),
("swinv2", "ViTFeatureExtractor"),
("table-transformer", "DetrFeatureExtractor"),
("timesformer", "VideoMAEFeatureExtractor"),
("tvlt", "TvltFeatureExtractor"),
("unispeech", "Wav2Vec2FeatureExtractor"),
("unispeech-sat", "Wav2Vec2FeatureExtractor"),
("univnet", "UnivNetFeatureExtractor"),
("van", "ConvNextFeatureExtractor"),
("videomae", "VideoMAEFeatureExtractor"),
("vilt", "ViltFeatureExtractor"),
("vit", "ViTFeatureExtractor"),
("vit_mae", "ViTFeatureExtractor"),
("vit_msn", "ViTFeatureExtractor"),
("wav2vec2", "Wav2Vec2FeatureExtractor"),
("wav2vec2-conformer", "Wav2Vec2FeatureExtractor"),
("wavlm", "Wav2Vec2FeatureExtractor"),
("whisper", "WhisperFeatureExtractor"),
("xclip", "CLIPFeatureExtractor"),
("yolos", "YolosFeatureExtractor"),
]
)
FEATURE_EXTRACTOR_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, FEATURE_EXTRACTOR_MAPPING_NAMES)
def feature_extractor_class_from_name(class_name: str):
for module_name, extractors in FEATURE_EXTRACTOR_MAPPING_NAMES.items():
if class_name in extractors:
module_name = model_type_to_module_name(module_name)
module = importlib.import_module(f".{module_name}", "transformers.models")
try:
return getattr(module, class_name)
except AttributeError:
continue
for _, extractor in FEATURE_EXTRACTOR_MAPPING._extra_content.items():
if getattr(extractor, "__name__", None) == class_name:
return extractor
# We did not fine the class, but maybe it's because a dep is missing. In that case, the class will be in the main
# init and we return the proper dummy to get an appropriate error message.
main_module = importlib.import_module("transformers")
if hasattr(main_module, class_name):
return getattr(main_module, class_name)
return None
def get_feature_extractor_config(
pretrained_model_name_or_path: Union[str, os.PathLike],
cache_dir: Optional[Union[str, os.PathLike]] = None,
force_download: bool = False,
resume_download: bool = False,
proxies: Optional[Dict[str, str]] = None,
token: Optional[Union[bool, str]] = None,
revision: Optional[str] = None,
local_files_only: bool = False,
**kwargs,
):
"""
Loads the tokenizer configuration from a pretrained model tokenizer configuration.
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained model configuration hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced
under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a configuration file saved using the
[`~PreTrainedTokenizer.save_pretrained`] method, e.g., `./my_model_directory/`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the standard
cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the configuration files and override the cached versions if they
exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
local_files_only (`bool`, *optional*, defaults to `False`):
If `True`, will only try to load the tokenizer configuration from local files.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Returns:
`Dict`: The configuration of the tokenizer.
Examples:
```python
# Download configuration from huggingface.co and cache.
tokenizer_config = get_tokenizer_config("bert-base-uncased")
# This model does not have a tokenizer config so the result will be an empty dict.
tokenizer_config = get_tokenizer_config("xlm-roberta-base")
# Save a pretrained tokenizer locally and you can reload its config
from transformers import AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("bert-base-cased")
tokenizer.save_pretrained("tokenizer-test")
tokenizer_config = get_tokenizer_config("tokenizer-test")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if token is not None:
raise ValueError("`token` and `use_auth_token` are both specified. Please set only the argument `token`.")
token = use_auth_token
resolved_config_file = get_file_from_repo(
pretrained_model_name_or_path,
FEATURE_EXTRACTOR_NAME,
cache_dir=cache_dir,
force_download=force_download,
resume_download=resume_download,
proxies=proxies,
token=token,
revision=revision,
local_files_only=local_files_only,
)
if resolved_config_file is None:
logger.info(
"Could not locate the feature extractor configuration file, will try to use the model config instead."
)
return {}
with open(resolved_config_file, encoding="utf-8") as reader:
return json.load(reader)
class AutoFeatureExtractor:
r"""
This is a generic feature extractor class that will be instantiated as one of the feature extractor classes of the
library when created with the [`AutoFeatureExtractor.from_pretrained`] class method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
def __init__(self):
raise EnvironmentError(
"AutoFeatureExtractor is designed to be instantiated "
"using the `AutoFeatureExtractor.from_pretrained(pretrained_model_name_or_path)` method."
)
@classmethod
@replace_list_option_in_docstrings(FEATURE_EXTRACTOR_MAPPING_NAMES)
def from_pretrained(cls, pretrained_model_name_or_path, **kwargs):
r"""
Instantiate one of the feature extractor classes of the library from a pretrained model vocabulary.
The feature extractor class to instantiate is selected based on the `model_type` property of the config object
(either passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's
missing, by falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Params:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained feature_extractor hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a feature extractor file saved using the
[`~feature_extraction_utils.FeatureExtractionMixin.save_pretrained`] method, e.g.,
`./my_model_directory/`.
- a path or url to a saved feature extractor JSON *file*, e.g.,
`./my_model_directory/preprocessor_config.json`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model feature extractor should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the feature extractor files and override the cached versions
if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file
exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
return_unused_kwargs (`bool`, *optional*, defaults to `False`):
If `False`, then this function returns just the final feature extractor object. If `True`, then this
functions returns a `Tuple(feature_extractor, unused_kwargs)` where *unused_kwargs* is a dictionary
consisting of the key/value pairs whose keys are not feature extractor attributes: i.e., the part of
`kwargs` which has not been used to update `feature_extractor` and is otherwise ignored.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
kwargs (`Dict[str, Any]`, *optional*):
The values in kwargs of any keys which are feature extractor attributes will be used to override the
loaded values. Behavior concerning key/value pairs whose keys are *not* feature extractor attributes is
controlled by the `return_unused_kwargs` keyword parameter.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Examples:
```python
>>> from transformers import AutoFeatureExtractor
>>> # Download feature extractor from huggingface.co and cache.
>>> feature_extractor = AutoFeatureExtractor.from_pretrained("facebook/wav2vec2-base-960h")
>>> # If feature extractor files are in a directory (e.g. feature extractor was saved using *save_pretrained('./test/saved_model/')*)
>>> # feature_extractor = AutoFeatureExtractor.from_pretrained("./test/saved_model/")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if kwargs.get("token", None) is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
kwargs["token"] = use_auth_token
config = kwargs.pop("config", None)
trust_remote_code = kwargs.pop("trust_remote_code", None)
kwargs["_from_auto"] = True
config_dict, _ = FeatureExtractionMixin.get_feature_extractor_dict(pretrained_model_name_or_path, **kwargs)
feature_extractor_class = config_dict.get("feature_extractor_type", None)
feature_extractor_auto_map = None
if "AutoFeatureExtractor" in config_dict.get("auto_map", {}):
feature_extractor_auto_map = config_dict["auto_map"]["AutoFeatureExtractor"]
# If we don't find the feature extractor class in the feature extractor config, let's try the model config.
if feature_extractor_class is None and feature_extractor_auto_map is None:
if not isinstance(config, PretrainedConfig):
config = AutoConfig.from_pretrained(pretrained_model_name_or_path, **kwargs)
# It could be in `config.feature_extractor_type``
feature_extractor_class = getattr(config, "feature_extractor_type", None)
if hasattr(config, "auto_map") and "AutoFeatureExtractor" in config.auto_map:
feature_extractor_auto_map = config.auto_map["AutoFeatureExtractor"]
if feature_extractor_class is not None:
feature_extractor_class = feature_extractor_class_from_name(feature_extractor_class)
has_remote_code = feature_extractor_auto_map is not None
has_local_code = feature_extractor_class is not None or type(config) in FEATURE_EXTRACTOR_MAPPING
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
feature_extractor_class = get_class_from_dynamic_module(
feature_extractor_auto_map, pretrained_model_name_or_path, **kwargs
)
_ = kwargs.pop("code_revision", None)
if os.path.isdir(pretrained_model_name_or_path):
feature_extractor_class.register_for_auto_class()
return feature_extractor_class.from_dict(config_dict, **kwargs)
elif feature_extractor_class is not None:
return feature_extractor_class.from_dict(config_dict, **kwargs)
# Last try: we use the FEATURE_EXTRACTOR_MAPPING.
elif type(config) in FEATURE_EXTRACTOR_MAPPING:
feature_extractor_class = FEATURE_EXTRACTOR_MAPPING[type(config)]
return feature_extractor_class.from_dict(config_dict, **kwargs)
raise ValueError(
f"Unrecognized feature extractor in {pretrained_model_name_or_path}. Should have a "
f"`feature_extractor_type` key in its {FEATURE_EXTRACTOR_NAME} of {CONFIG_NAME}, or one of the following "
f"`model_type` keys in its {CONFIG_NAME}: {', '.join(c for c in FEATURE_EXTRACTOR_MAPPING_NAMES.keys())}"
)
@staticmethod
def register(config_class, feature_extractor_class, exist_ok=False):
"""
Register a new feature extractor for this class.
Args:
config_class ([`PretrainedConfig`]):
The configuration corresponding to the model to register.
feature_extractor_class ([`FeatureExtractorMixin`]): The feature extractor to register.
"""
FEATURE_EXTRACTOR_MAPPING.register(config_class, feature_extractor_class, exist_ok=exist_ok)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/auto/tokenization_auto.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Auto Tokenizer class."""
import importlib
import json
import os
import warnings
from collections import OrderedDict
from typing import TYPE_CHECKING, Dict, Optional, Tuple, Union
from ...configuration_utils import PretrainedConfig
from ...dynamic_module_utils import get_class_from_dynamic_module, resolve_trust_remote_code
from ...tokenization_utils import PreTrainedTokenizer
from ...tokenization_utils_base import TOKENIZER_CONFIG_FILE
from ...utils import cached_file, extract_commit_hash, is_sentencepiece_available, is_tokenizers_available, logging
from ..encoder_decoder import EncoderDecoderConfig
from .auto_factory import _LazyAutoMapping
from .configuration_auto import (
CONFIG_MAPPING_NAMES,
AutoConfig,
config_class_to_model_type,
model_type_to_module_name,
replace_list_option_in_docstrings,
)
if is_tokenizers_available():
from ...tokenization_utils_fast import PreTrainedTokenizerFast
else:
PreTrainedTokenizerFast = None
logger = logging.get_logger(__name__)
if TYPE_CHECKING:
# This significantly improves completion suggestion performance when
# the transformers package is used with Microsoft's Pylance language server.
TOKENIZER_MAPPING_NAMES: OrderedDict[str, Tuple[Optional[str], Optional[str]]] = OrderedDict()
else:
TOKENIZER_MAPPING_NAMES = OrderedDict(
[
(
"albert",
(
"AlbertTokenizer" if is_sentencepiece_available() else None,
"AlbertTokenizerFast" if is_tokenizers_available() else None,
),
),
("align", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("bark", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("bart", ("BartTokenizer", "BartTokenizerFast")),
(
"barthez",
(
"BarthezTokenizer" if is_sentencepiece_available() else None,
"BarthezTokenizerFast" if is_tokenizers_available() else None,
),
),
("bartpho", ("BartphoTokenizer", None)),
("bert", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("bert-generation", ("BertGenerationTokenizer" if is_sentencepiece_available() else None, None)),
("bert-japanese", ("BertJapaneseTokenizer", None)),
("bertweet", ("BertweetTokenizer", None)),
(
"big_bird",
(
"BigBirdTokenizer" if is_sentencepiece_available() else None,
"BigBirdTokenizerFast" if is_tokenizers_available() else None,
),
),
("bigbird_pegasus", ("PegasusTokenizer", "PegasusTokenizerFast" if is_tokenizers_available() else None)),
("biogpt", ("BioGptTokenizer", None)),
("blenderbot", ("BlenderbotTokenizer", "BlenderbotTokenizerFast")),
("blenderbot-small", ("BlenderbotSmallTokenizer", None)),
("blip", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("blip-2", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("bloom", (None, "BloomTokenizerFast" if is_tokenizers_available() else None)),
("bridgetower", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
("bros", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("byt5", ("ByT5Tokenizer", None)),
(
"camembert",
(
"CamembertTokenizer" if is_sentencepiece_available() else None,
"CamembertTokenizerFast" if is_tokenizers_available() else None,
),
),
("canine", ("CanineTokenizer", None)),
("chinese_clip", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
(
"clap",
(
"RobertaTokenizer",
"RobertaTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"clip",
(
"CLIPTokenizer",
"CLIPTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"clipseg",
(
"CLIPTokenizer",
"CLIPTokenizerFast" if is_tokenizers_available() else None,
),
),
("clvp", ("ClvpTokenizer", None)),
(
"code_llama",
(
"CodeLlamaTokenizer" if is_sentencepiece_available() else None,
"CodeLlamaTokenizerFast" if is_tokenizers_available() else None,
),
),
("codegen", ("CodeGenTokenizer", "CodeGenTokenizerFast" if is_tokenizers_available() else None)),
("convbert", ("ConvBertTokenizer", "ConvBertTokenizerFast" if is_tokenizers_available() else None)),
(
"cpm",
(
"CpmTokenizer" if is_sentencepiece_available() else None,
"CpmTokenizerFast" if is_tokenizers_available() else None,
),
),
("cpmant", ("CpmAntTokenizer", None)),
("ctrl", ("CTRLTokenizer", None)),
("data2vec-audio", ("Wav2Vec2CTCTokenizer", None)),
("data2vec-text", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
("deberta", ("DebertaTokenizer", "DebertaTokenizerFast" if is_tokenizers_available() else None)),
(
"deberta-v2",
(
"DebertaV2Tokenizer" if is_sentencepiece_available() else None,
"DebertaV2TokenizerFast" if is_tokenizers_available() else None,
),
),
("distilbert", ("DistilBertTokenizer", "DistilBertTokenizerFast" if is_tokenizers_available() else None)),
(
"dpr",
(
"DPRQuestionEncoderTokenizer",
"DPRQuestionEncoderTokenizerFast" if is_tokenizers_available() else None,
),
),
("electra", ("ElectraTokenizer", "ElectraTokenizerFast" if is_tokenizers_available() else None)),
("ernie", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("ernie_m", ("ErnieMTokenizer" if is_sentencepiece_available() else None, None)),
("esm", ("EsmTokenizer", None)),
("falcon", (None, "PreTrainedTokenizerFast" if is_tokenizers_available() else None)),
("flaubert", ("FlaubertTokenizer", None)),
("fnet", ("FNetTokenizer", "FNetTokenizerFast" if is_tokenizers_available() else None)),
("fsmt", ("FSMTTokenizer", None)),
("funnel", ("FunnelTokenizer", "FunnelTokenizerFast" if is_tokenizers_available() else None)),
("git", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("gpt-sw3", ("GPTSw3Tokenizer" if is_sentencepiece_available() else None, None)),
("gpt2", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("gpt_bigcode", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("gpt_neo", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("gpt_neox", (None, "GPTNeoXTokenizerFast" if is_tokenizers_available() else None)),
("gpt_neox_japanese", ("GPTNeoXJapaneseTokenizer", None)),
("gptj", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("gptsan-japanese", ("GPTSanJapaneseTokenizer", None)),
("groupvit", ("CLIPTokenizer", "CLIPTokenizerFast" if is_tokenizers_available() else None)),
("herbert", ("HerbertTokenizer", "HerbertTokenizerFast" if is_tokenizers_available() else None)),
("hubert", ("Wav2Vec2CTCTokenizer", None)),
("ibert", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
("idefics", (None, "LlamaTokenizerFast" if is_tokenizers_available() else None)),
("instructblip", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("jukebox", ("JukeboxTokenizer", None)),
(
"kosmos-2",
(
"XLMRobertaTokenizer" if is_sentencepiece_available() else None,
"XLMRobertaTokenizerFast" if is_tokenizers_available() else None,
),
),
("layoutlm", ("LayoutLMTokenizer", "LayoutLMTokenizerFast" if is_tokenizers_available() else None)),
("layoutlmv2", ("LayoutLMv2Tokenizer", "LayoutLMv2TokenizerFast" if is_tokenizers_available() else None)),
("layoutlmv3", ("LayoutLMv3Tokenizer", "LayoutLMv3TokenizerFast" if is_tokenizers_available() else None)),
("layoutxlm", ("LayoutXLMTokenizer", "LayoutXLMTokenizerFast" if is_tokenizers_available() else None)),
("led", ("LEDTokenizer", "LEDTokenizerFast" if is_tokenizers_available() else None)),
("lilt", ("LayoutLMv3Tokenizer", "LayoutLMv3TokenizerFast" if is_tokenizers_available() else None)),
(
"llama",
(
"LlamaTokenizer" if is_sentencepiece_available() else None,
"LlamaTokenizerFast" if is_tokenizers_available() else None,
),
),
("llava", ("LlamaTokenizer", "LlamaTokenizerFast" if is_tokenizers_available() else None)),
("longformer", ("LongformerTokenizer", "LongformerTokenizerFast" if is_tokenizers_available() else None)),
(
"longt5",
(
"T5Tokenizer" if is_sentencepiece_available() else None,
"T5TokenizerFast" if is_tokenizers_available() else None,
),
),
("luke", ("LukeTokenizer", None)),
("lxmert", ("LxmertTokenizer", "LxmertTokenizerFast" if is_tokenizers_available() else None)),
("m2m_100", ("M2M100Tokenizer" if is_sentencepiece_available() else None, None)),
("marian", ("MarianTokenizer" if is_sentencepiece_available() else None, None)),
(
"mbart",
(
"MBartTokenizer" if is_sentencepiece_available() else None,
"MBartTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"mbart50",
(
"MBart50Tokenizer" if is_sentencepiece_available() else None,
"MBart50TokenizerFast" if is_tokenizers_available() else None,
),
),
("mega", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
("megatron-bert", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("mgp-str", ("MgpstrTokenizer", None)),
(
"mistral",
(
"LlamaTokenizer" if is_sentencepiece_available() else None,
"LlamaTokenizerFast" if is_tokenizers_available() else None,
),
),
("mluke", ("MLukeTokenizer" if is_sentencepiece_available() else None, None)),
("mobilebert", ("MobileBertTokenizer", "MobileBertTokenizerFast" if is_tokenizers_available() else None)),
("mpnet", ("MPNetTokenizer", "MPNetTokenizerFast" if is_tokenizers_available() else None)),
("mpt", (None, "GPTNeoXTokenizerFast" if is_tokenizers_available() else None)),
("mra", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
(
"mt5",
(
"MT5Tokenizer" if is_sentencepiece_available() else None,
"MT5TokenizerFast" if is_tokenizers_available() else None,
),
),
("musicgen", ("T5Tokenizer", "T5TokenizerFast" if is_tokenizers_available() else None)),
("mvp", ("MvpTokenizer", "MvpTokenizerFast" if is_tokenizers_available() else None)),
("nezha", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
(
"nllb",
(
"NllbTokenizer" if is_sentencepiece_available() else None,
"NllbTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"nllb-moe",
(
"NllbTokenizer" if is_sentencepiece_available() else None,
"NllbTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"nystromformer",
(
"AlbertTokenizer" if is_sentencepiece_available() else None,
"AlbertTokenizerFast" if is_tokenizers_available() else None,
),
),
("oneformer", ("CLIPTokenizer", "CLIPTokenizerFast" if is_tokenizers_available() else None)),
("openai-gpt", ("OpenAIGPTTokenizer", "OpenAIGPTTokenizerFast" if is_tokenizers_available() else None)),
("opt", ("GPT2Tokenizer", "GPT2TokenizerFast" if is_tokenizers_available() else None)),
("owlv2", ("CLIPTokenizer", "CLIPTokenizerFast" if is_tokenizers_available() else None)),
("owlvit", ("CLIPTokenizer", "CLIPTokenizerFast" if is_tokenizers_available() else None)),
(
"pegasus",
(
"PegasusTokenizer" if is_sentencepiece_available() else None,
"PegasusTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"pegasus_x",
(
"PegasusTokenizer" if is_sentencepiece_available() else None,
"PegasusTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"perceiver",
(
"PerceiverTokenizer",
None,
),
),
(
"persimmon",
(
"LlamaTokenizer" if is_sentencepiece_available() else None,
"LlamaTokenizerFast" if is_tokenizers_available() else None,
),
),
("phi", ("CodeGenTokenizer", "CodeGenTokenizerFast" if is_tokenizers_available() else None)),
("phobert", ("PhobertTokenizer", None)),
("pix2struct", ("T5Tokenizer", "T5TokenizerFast" if is_tokenizers_available() else None)),
("plbart", ("PLBartTokenizer" if is_sentencepiece_available() else None, None)),
("prophetnet", ("ProphetNetTokenizer", None)),
("qdqbert", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("rag", ("RagTokenizer", None)),
("realm", ("RealmTokenizer", "RealmTokenizerFast" if is_tokenizers_available() else None)),
(
"reformer",
(
"ReformerTokenizer" if is_sentencepiece_available() else None,
"ReformerTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"rembert",
(
"RemBertTokenizer" if is_sentencepiece_available() else None,
"RemBertTokenizerFast" if is_tokenizers_available() else None,
),
),
("retribert", ("RetriBertTokenizer", "RetriBertTokenizerFast" if is_tokenizers_available() else None)),
("roberta", ("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None)),
(
"roberta-prelayernorm",
("RobertaTokenizer", "RobertaTokenizerFast" if is_tokenizers_available() else None),
),
("roc_bert", ("RoCBertTokenizer", None)),
("roformer", ("RoFormerTokenizer", "RoFormerTokenizerFast" if is_tokenizers_available() else None)),
("rwkv", (None, "GPTNeoXTokenizerFast" if is_tokenizers_available() else None)),
(
"seamless_m4t",
(
"SeamlessM4TTokenizer" if is_sentencepiece_available() else None,
"SeamlessM4TTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"seamless_m4t_v2",
(
"SeamlessM4TTokenizer" if is_sentencepiece_available() else None,
"SeamlessM4TTokenizerFast" if is_tokenizers_available() else None,
),
),
("speech_to_text", ("Speech2TextTokenizer" if is_sentencepiece_available() else None, None)),
("speech_to_text_2", ("Speech2Text2Tokenizer", None)),
("speecht5", ("SpeechT5Tokenizer" if is_sentencepiece_available() else None, None)),
("splinter", ("SplinterTokenizer", "SplinterTokenizerFast")),
(
"squeezebert",
("SqueezeBertTokenizer", "SqueezeBertTokenizerFast" if is_tokenizers_available() else None),
),
(
"switch_transformers",
(
"T5Tokenizer" if is_sentencepiece_available() else None,
"T5TokenizerFast" if is_tokenizers_available() else None,
),
),
(
"t5",
(
"T5Tokenizer" if is_sentencepiece_available() else None,
"T5TokenizerFast" if is_tokenizers_available() else None,
),
),
("tapas", ("TapasTokenizer", None)),
("tapex", ("TapexTokenizer", None)),
("transfo-xl", ("TransfoXLTokenizer", None)),
("tvp", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
(
"umt5",
(
"T5Tokenizer" if is_sentencepiece_available() else None,
"T5TokenizerFast" if is_tokenizers_available() else None,
),
),
("vilt", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("visual_bert", ("BertTokenizer", "BertTokenizerFast" if is_tokenizers_available() else None)),
("vits", ("VitsTokenizer", None)),
("wav2vec2", ("Wav2Vec2CTCTokenizer", None)),
("wav2vec2-conformer", ("Wav2Vec2CTCTokenizer", None)),
("wav2vec2_phoneme", ("Wav2Vec2PhonemeCTCTokenizer", None)),
("whisper", ("WhisperTokenizer", "WhisperTokenizerFast" if is_tokenizers_available() else None)),
("xclip", ("CLIPTokenizer", "CLIPTokenizerFast" if is_tokenizers_available() else None)),
(
"xglm",
(
"XGLMTokenizer" if is_sentencepiece_available() else None,
"XGLMTokenizerFast" if is_tokenizers_available() else None,
),
),
("xlm", ("XLMTokenizer", None)),
("xlm-prophetnet", ("XLMProphetNetTokenizer" if is_sentencepiece_available() else None, None)),
(
"xlm-roberta",
(
"XLMRobertaTokenizer" if is_sentencepiece_available() else None,
"XLMRobertaTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"xlm-roberta-xl",
(
"XLMRobertaTokenizer" if is_sentencepiece_available() else None,
"XLMRobertaTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"xlnet",
(
"XLNetTokenizer" if is_sentencepiece_available() else None,
"XLNetTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"xmod",
(
"XLMRobertaTokenizer" if is_sentencepiece_available() else None,
"XLMRobertaTokenizerFast" if is_tokenizers_available() else None,
),
),
(
"yoso",
(
"AlbertTokenizer" if is_sentencepiece_available() else None,
"AlbertTokenizerFast" if is_tokenizers_available() else None,
),
),
]
)
TOKENIZER_MAPPING = _LazyAutoMapping(CONFIG_MAPPING_NAMES, TOKENIZER_MAPPING_NAMES)
CONFIG_TO_TYPE = {v: k for k, v in CONFIG_MAPPING_NAMES.items()}
def tokenizer_class_from_name(class_name: str):
if class_name == "PreTrainedTokenizerFast":
return PreTrainedTokenizerFast
for module_name, tokenizers in TOKENIZER_MAPPING_NAMES.items():
if class_name in tokenizers:
module_name = model_type_to_module_name(module_name)
module = importlib.import_module(f".{module_name}", "transformers.models")
try:
return getattr(module, class_name)
except AttributeError:
continue
for config, tokenizers in TOKENIZER_MAPPING._extra_content.items():
for tokenizer in tokenizers:
if getattr(tokenizer, "__name__", None) == class_name:
return tokenizer
# We did not fine the class, but maybe it's because a dep is missing. In that case, the class will be in the main
# init and we return the proper dummy to get an appropriate error message.
main_module = importlib.import_module("transformers")
if hasattr(main_module, class_name):
return getattr(main_module, class_name)
return None
def get_tokenizer_config(
pretrained_model_name_or_path: Union[str, os.PathLike],
cache_dir: Optional[Union[str, os.PathLike]] = None,
force_download: bool = False,
resume_download: bool = False,
proxies: Optional[Dict[str, str]] = None,
token: Optional[Union[bool, str]] = None,
revision: Optional[str] = None,
local_files_only: bool = False,
subfolder: str = "",
**kwargs,
):
"""
Loads the tokenizer configuration from a pretrained model tokenizer configuration.
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained model configuration hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced
under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a configuration file saved using the
[`~PreTrainedTokenizer.save_pretrained`] method, e.g., `./my_model_directory/`.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the standard
cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force to (re-)download the configuration files and override the cached versions if they
exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received file. Attempts to resume the download if such a file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}.` The proxies are used on each request.
token (`str` or *bool*, *optional*):
The token to use as HTTP bearer authorization for remote files. If `True`, will use the token generated
when running `huggingface-cli login` (stored in `~/.huggingface`).
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
local_files_only (`bool`, *optional*, defaults to `False`):
If `True`, will only try to load the tokenizer configuration from local files.
subfolder (`str`, *optional*, defaults to `""`):
In case the tokenizer config is located inside a subfolder of the model repo on huggingface.co, you can
specify the folder name here.
<Tip>
Passing `token=True` is required when you want to use a private model.
</Tip>
Returns:
`Dict`: The configuration of the tokenizer.
Examples:
```python
# Download configuration from huggingface.co and cache.
tokenizer_config = get_tokenizer_config("bert-base-uncased")
# This model does not have a tokenizer config so the result will be an empty dict.
tokenizer_config = get_tokenizer_config("xlm-roberta-base")
# Save a pretrained tokenizer locally and you can reload its config
from transformers import AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("bert-base-cased")
tokenizer.save_pretrained("tokenizer-test")
tokenizer_config = get_tokenizer_config("tokenizer-test")
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if token is not None:
raise ValueError("`token` and `use_auth_token` are both specified. Please set only the argument `token`.")
token = use_auth_token
commit_hash = kwargs.get("_commit_hash", None)
resolved_config_file = cached_file(
pretrained_model_name_or_path,
TOKENIZER_CONFIG_FILE,
cache_dir=cache_dir,
force_download=force_download,
resume_download=resume_download,
proxies=proxies,
token=token,
revision=revision,
local_files_only=local_files_only,
subfolder=subfolder,
_raise_exceptions_for_missing_entries=False,
_raise_exceptions_for_connection_errors=False,
_commit_hash=commit_hash,
)
if resolved_config_file is None:
logger.info("Could not locate the tokenizer configuration file, will try to use the model config instead.")
return {}
commit_hash = extract_commit_hash(resolved_config_file, commit_hash)
with open(resolved_config_file, encoding="utf-8") as reader:
result = json.load(reader)
result["_commit_hash"] = commit_hash
return result
class AutoTokenizer:
r"""
This is a generic tokenizer class that will be instantiated as one of the tokenizer classes of the library when
created with the [`AutoTokenizer.from_pretrained`] class method.
This class cannot be instantiated directly using `__init__()` (throws an error).
"""
def __init__(self):
raise EnvironmentError(
"AutoTokenizer is designed to be instantiated "
"using the `AutoTokenizer.from_pretrained(pretrained_model_name_or_path)` method."
)
@classmethod
@replace_list_option_in_docstrings(TOKENIZER_MAPPING_NAMES)
def from_pretrained(cls, pretrained_model_name_or_path, *inputs, **kwargs):
r"""
Instantiate one of the tokenizer classes of the library from a pretrained model vocabulary.
The tokenizer class to instantiate is selected based on the `model_type` property of the config object (either
passed as an argument or loaded from `pretrained_model_name_or_path` if possible), or when it's missing, by
falling back to using pattern matching on `pretrained_model_name_or_path`:
List options
Params:
pretrained_model_name_or_path (`str` or `os.PathLike`):
Can be either:
- A string, the *model id* of a predefined tokenizer hosted inside a model repo on huggingface.co.
Valid model ids can be located at the root-level, like `bert-base-uncased`, or namespaced under a
user or organization name, like `dbmdz/bert-base-german-cased`.
- A path to a *directory* containing vocabulary files required by the tokenizer, for instance saved
using the [`~PreTrainedTokenizer.save_pretrained`] method, e.g., `./my_model_directory/`.
- A path or url to a single saved vocabulary file if and only if the tokenizer only requires a
single vocabulary file (like Bert or XLNet), e.g.: `./my_model_directory/vocab.txt`. (Not
applicable to all derived classes)
inputs (additional positional arguments, *optional*):
Will be passed along to the Tokenizer `__init__()` method.
config ([`PretrainedConfig`], *optional*)
The configuration object used to determine the tokenizer class to instantiate.
cache_dir (`str` or `os.PathLike`, *optional*):
Path to a directory in which a downloaded pretrained model configuration should be cached if the
standard cache should not be used.
force_download (`bool`, *optional*, defaults to `False`):
Whether or not to force the (re-)download the model weights and configuration files and override the
cached versions if they exist.
resume_download (`bool`, *optional*, defaults to `False`):
Whether or not to delete incompletely received files. Will attempt to resume the download if such a
file exists.
proxies (`Dict[str, str]`, *optional*):
A dictionary of proxy servers to use by protocol or endpoint, e.g., `{'http': 'foo.bar:3128',
'http://hostname': 'foo.bar:4012'}`. The proxies are used on each request.
revision (`str`, *optional*, defaults to `"main"`):
The specific model version to use. It can be a branch name, a tag name, or a commit id, since we use a
git-based system for storing models and other artifacts on huggingface.co, so `revision` can be any
identifier allowed by git.
subfolder (`str`, *optional*):
In case the relevant files are located inside a subfolder of the model repo on huggingface.co (e.g. for
facebook/rag-token-base), specify it here.
use_fast (`bool`, *optional*, defaults to `True`):
Use a [fast Rust-based tokenizer](https://huggingface.co/docs/tokenizers/index) if it is supported for
a given model. If a fast tokenizer is not available for a given model, a normal Python-based tokenizer
is returned instead.
tokenizer_type (`str`, *optional*):
Tokenizer type to be loaded.
trust_remote_code (`bool`, *optional*, defaults to `False`):
Whether or not to allow for custom models defined on the Hub in their own modeling files. This option
should only be set to `True` for repositories you trust and in which you have read the code, as it will
execute code present on the Hub on your local machine.
kwargs (additional keyword arguments, *optional*):
Will be passed to the Tokenizer `__init__()` method. Can be used to set special tokens like
`bos_token`, `eos_token`, `unk_token`, `sep_token`, `pad_token`, `cls_token`, `mask_token`,
`additional_special_tokens`. See parameters in the `__init__()` for more details.
Examples:
```python
>>> from transformers import AutoTokenizer
>>> # Download vocabulary from huggingface.co and cache.
>>> tokenizer = AutoTokenizer.from_pretrained("bert-base-uncased")
>>> # Download vocabulary from huggingface.co (user-uploaded) and cache.
>>> tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-german-cased")
>>> # If vocabulary files are in a directory (e.g. tokenizer was saved using *save_pretrained('./test/saved_model/')*)
>>> # tokenizer = AutoTokenizer.from_pretrained("./test/bert_saved_model/")
>>> # Download vocabulary from huggingface.co and define model-specific arguments
>>> tokenizer = AutoTokenizer.from_pretrained("roberta-base", add_prefix_space=True)
```"""
use_auth_token = kwargs.pop("use_auth_token", None)
if use_auth_token is not None:
warnings.warn(
"The `use_auth_token` argument is deprecated and will be removed in v5 of Transformers. Please use `token` instead.",
FutureWarning,
)
if kwargs.get("token", None) is not None:
raise ValueError(
"`token` and `use_auth_token` are both specified. Please set only the argument `token`."
)
kwargs["token"] = use_auth_token
config = kwargs.pop("config", None)
kwargs["_from_auto"] = True
use_fast = kwargs.pop("use_fast", True)
tokenizer_type = kwargs.pop("tokenizer_type", None)
trust_remote_code = kwargs.pop("trust_remote_code", None)
# First, let's see whether the tokenizer_type is passed so that we can leverage it
if tokenizer_type is not None:
tokenizer_class = None
tokenizer_class_tuple = TOKENIZER_MAPPING_NAMES.get(tokenizer_type, None)
if tokenizer_class_tuple is None:
raise ValueError(
f"Passed `tokenizer_type` {tokenizer_type} does not exist. `tokenizer_type` should be one of "
f"{', '.join(c for c in TOKENIZER_MAPPING_NAMES.keys())}."
)
tokenizer_class_name, tokenizer_fast_class_name = tokenizer_class_tuple
if use_fast:
if tokenizer_fast_class_name is not None:
tokenizer_class = tokenizer_class_from_name(tokenizer_fast_class_name)
else:
logger.warning(
"`use_fast` is set to `True` but the tokenizer class does not have a fast version. "
" Falling back to the slow version."
)
if tokenizer_class is None:
tokenizer_class = tokenizer_class_from_name(tokenizer_class_name)
if tokenizer_class is None:
raise ValueError(f"Tokenizer class {tokenizer_class_name} is not currently imported.")
return tokenizer_class.from_pretrained(pretrained_model_name_or_path, *inputs, **kwargs)
# Next, let's try to use the tokenizer_config file to get the tokenizer class.
tokenizer_config = get_tokenizer_config(pretrained_model_name_or_path, **kwargs)
if "_commit_hash" in tokenizer_config:
kwargs["_commit_hash"] = tokenizer_config["_commit_hash"]
config_tokenizer_class = tokenizer_config.get("tokenizer_class")
tokenizer_auto_map = None
if "auto_map" in tokenizer_config:
if isinstance(tokenizer_config["auto_map"], (tuple, list)):
# Legacy format for dynamic tokenizers
tokenizer_auto_map = tokenizer_config["auto_map"]
else:
tokenizer_auto_map = tokenizer_config["auto_map"].get("AutoTokenizer", None)
# If that did not work, let's try to use the config.
if config_tokenizer_class is None:
if not isinstance(config, PretrainedConfig):
config = AutoConfig.from_pretrained(
pretrained_model_name_or_path, trust_remote_code=trust_remote_code, **kwargs
)
config_tokenizer_class = config.tokenizer_class
if hasattr(config, "auto_map") and "AutoTokenizer" in config.auto_map:
tokenizer_auto_map = config.auto_map["AutoTokenizer"]
has_remote_code = tokenizer_auto_map is not None
has_local_code = config_tokenizer_class is not None or type(config) in TOKENIZER_MAPPING
trust_remote_code = resolve_trust_remote_code(
trust_remote_code, pretrained_model_name_or_path, has_local_code, has_remote_code
)
if has_remote_code and trust_remote_code:
if use_fast and tokenizer_auto_map[1] is not None:
class_ref = tokenizer_auto_map[1]
else:
class_ref = tokenizer_auto_map[0]
tokenizer_class = get_class_from_dynamic_module(class_ref, pretrained_model_name_or_path, **kwargs)
_ = kwargs.pop("code_revision", None)
if os.path.isdir(pretrained_model_name_or_path):
tokenizer_class.register_for_auto_class()
return tokenizer_class.from_pretrained(pretrained_model_name_or_path, *inputs, **kwargs)
elif config_tokenizer_class is not None:
tokenizer_class = None
if use_fast and not config_tokenizer_class.endswith("Fast"):
tokenizer_class_candidate = f"{config_tokenizer_class}Fast"
tokenizer_class = tokenizer_class_from_name(tokenizer_class_candidate)
if tokenizer_class is None:
tokenizer_class_candidate = config_tokenizer_class
tokenizer_class = tokenizer_class_from_name(tokenizer_class_candidate)
if tokenizer_class is None:
raise ValueError(
f"Tokenizer class {tokenizer_class_candidate} does not exist or is not currently imported."
)
return tokenizer_class.from_pretrained(pretrained_model_name_or_path, *inputs, **kwargs)
# Otherwise we have to be creative.
# if model is an encoder decoder, the encoder tokenizer class is used by default
if isinstance(config, EncoderDecoderConfig):
if type(config.decoder) is not type(config.encoder): # noqa: E721
logger.warning(
f"The encoder model config class: {config.encoder.__class__} is different from the decoder model "
f"config class: {config.decoder.__class__}. It is not recommended to use the "
"`AutoTokenizer.from_pretrained()` method in this case. Please use the encoder and decoder "
"specific tokenizer classes."
)
config = config.encoder
model_type = config_class_to_model_type(type(config).__name__)
if model_type is not None:
tokenizer_class_py, tokenizer_class_fast = TOKENIZER_MAPPING[type(config)]
if tokenizer_class_fast and (use_fast or tokenizer_class_py is None):
return tokenizer_class_fast.from_pretrained(pretrained_model_name_or_path, *inputs, **kwargs)
else:
if tokenizer_class_py is not None:
return tokenizer_class_py.from_pretrained(pretrained_model_name_or_path, *inputs, **kwargs)
else:
raise ValueError(
"This tokenizer cannot be instantiated. Please make sure you have `sentencepiece` installed "
"in order to use this tokenizer."
)
raise ValueError(
f"Unrecognized configuration class {config.__class__} to build an AutoTokenizer.\n"
f"Model type should be one of {', '.join(c.__name__ for c in TOKENIZER_MAPPING.keys())}."
)
def register(config_class, slow_tokenizer_class=None, fast_tokenizer_class=None, exist_ok=False):
"""
Register a new tokenizer in this mapping.
Args:
config_class ([`PretrainedConfig`]):
The configuration corresponding to the model to register.
slow_tokenizer_class ([`PretrainedTokenizer`], *optional*):
The slow tokenizer to register.
fast_tokenizer_class ([`PretrainedTokenizerFast`], *optional*):
The fast tokenizer to register.
"""
if slow_tokenizer_class is None and fast_tokenizer_class is None:
raise ValueError("You need to pass either a `slow_tokenizer_class` or a `fast_tokenizer_class")
if slow_tokenizer_class is not None and issubclass(slow_tokenizer_class, PreTrainedTokenizerFast):
raise ValueError("You passed a fast tokenizer in the `slow_tokenizer_class`.")
if fast_tokenizer_class is not None and issubclass(fast_tokenizer_class, PreTrainedTokenizer):
raise ValueError("You passed a slow tokenizer in the `fast_tokenizer_class`.")
if (
slow_tokenizer_class is not None
and fast_tokenizer_class is not None
and issubclass(fast_tokenizer_class, PreTrainedTokenizerFast)
and fast_tokenizer_class.slow_tokenizer_class != slow_tokenizer_class
):
raise ValueError(
"The fast tokenizer class you are passing has a `slow_tokenizer_class` attribute that is not "
"consistent with the slow tokenizer class you passed (fast tokenizer has "
f"{fast_tokenizer_class.slow_tokenizer_class} and you passed {slow_tokenizer_class}. Fix one of those "
"so they match!"
)
# Avoid resetting a set slow/fast tokenizer if we are passing just the other ones.
if config_class in TOKENIZER_MAPPING._extra_content:
existing_slow, existing_fast = TOKENIZER_MAPPING[config_class]
if slow_tokenizer_class is None:
slow_tokenizer_class = existing_slow
if fast_tokenizer_class is None:
fast_tokenizer_class = existing_fast
TOKENIZER_MAPPING.register(config_class, (slow_tokenizer_class, fast_tokenizer_class), exist_ok=exist_ok)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bert_generation/configuration_bert_generation.py | # coding=utf-8
# Copyright 2020 The Google AI Language Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" BertGeneration model configuration"""
from ...configuration_utils import PretrainedConfig
class BertGenerationConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`BertGenerationPreTrainedModel`]. It is used to
instantiate a BertGeneration model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the BertGeneration
[google/bert_for_seq_generation_L-24_bbc_encoder](https://huggingface.co/google/bert_for_seq_generation_L-24_bbc_encoder)
architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50358):
Vocabulary size of the BERT model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`BertGeneration`].
hidden_size (`int`, *optional*, defaults to 1024):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 24):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often called feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
pad_token_id (`int`, *optional*, defaults to 0):
Padding token id.
bos_token_id (`int`, *optional*, defaults to 2):
Beginning of stream token id.
eos_token_id (`int`, *optional*, defaults to 1):
End of stream token id.
position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query"`. For
positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
[Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
Examples:
```python
>>> from transformers import BertGenerationConfig, BertGenerationEncoder
>>> # Initializing a BertGeneration config
>>> configuration = BertGenerationConfig()
>>> # Initializing a model (with random weights) from the config
>>> model = BertGenerationEncoder(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "bert-generation"
def __init__(
self,
vocab_size=50358,
hidden_size=1024,
num_hidden_layers=24,
num_attention_heads=16,
intermediate_size=4096,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
bos_token_id=2,
eos_token_id=1,
position_embedding_type="absolute",
use_cache=True,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bert_generation/tokenization_bert_generation.py | # coding=utf-8
# Copyright (c) 2020, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Tokenization class for model BertGeneration."""
import os
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple
import sentencepiece as spm
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "spiece.model"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"bert_for_seq_generation": (
"https://huggingface.co/google/bert_for_seq_generation_L-24_bbc_encoder/resolve/main/spiece.model"
),
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"bert_for_seq_generation": 512}
class BertGenerationTokenizer(PreTrainedTokenizer):
"""
Construct a BertGeneration tokenizer. Based on [SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
[SentencePiece](https://github.com/google/sentencepiece) file (generally has a *.spm* extension) that
contains the vocabulary necessary to instantiate a tokenizer.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The begin of sequence token.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
sep_token (`str`, *optional*, defaults to `"<::::>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
prefix_tokens: List[int] = []
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
bos_token="<s>",
eos_token="</s>",
unk_token="<unk>",
pad_token="<pad>",
sep_token="<::::>",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
self.vocab_file = vocab_file
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(vocab_file)
# Add extra_ids to the special token list
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
pad_token=pad_token,
sep_token=sep_token,
sp_model_kwargs=self.sp_model_kwargs,
**kwargs,
)
@property
def vocab_size(self):
return self.sp_model.get_piece_size()
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
return state
def __setstate__(self, d):
self.__dict__ = d
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(self.vocab_file)
def _tokenize(self, text: str) -> List[str]:
"""Take as input a string and return a list of strings (tokens) for words/sub-words"""
return self.sp_model.encode(text, out_type=str)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.sp_model.piece_to_id(token)
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
token = self.sp_model.IdToPiece(index)
return token
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
current_sub_tokens = []
out_string = ""
for token in tokens:
# make sure that special tokens are not decoded using sentencepiece model
if token in self.all_special_tokens:
out_string += self.sp_model.decode(current_sub_tokens) + token
current_sub_tokens = []
else:
current_sub_tokens.append(token)
out_string += self.sp_model.decode(current_sub_tokens)
return out_string.strip()
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
return (out_vocab_file,)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bert_generation/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_sentencepiece_available, is_torch_available
_import_structure = {"configuration_bert_generation": ["BertGenerationConfig"]}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_bert_generation"] = ["BertGenerationTokenizer"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_bert_generation"] = [
"BertGenerationDecoder",
"BertGenerationEncoder",
"BertGenerationPreTrainedModel",
"load_tf_weights_in_bert_generation",
]
if TYPE_CHECKING:
from .configuration_bert_generation import BertGenerationConfig
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_bert_generation import BertGenerationTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_bert_generation import (
BertGenerationDecoder,
BertGenerationEncoder,
BertGenerationPreTrainedModel,
load_tf_weights_in_bert_generation,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bert_generation/modeling_bert_generation.py | # coding=utf-8
# Copyright 2020 The Google AI Language Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch BERT model specific for generation."""
import math
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutputWithPastAndCrossAttentions, CausalLMOutputWithCrossAttentions
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_bert_generation import BertGenerationConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/bert_for_seq_generation_L-24_bbc_encoder"
_CONFIG_FOR_DOC = "BertGenerationConfig"
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->BertGeneration
class BertGenerationSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertSelfAttention with Bert->BertGeneration
class BertGenerationSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
use_cache = past_key_value is not None
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
query_length, key_length = query_layer.shape[2], key_layer.shape[2]
if use_cache:
position_ids_l = torch.tensor(key_length - 1, dtype=torch.long, device=hidden_states.device).view(
-1, 1
)
else:
position_ids_l = torch.arange(query_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(key_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertGenerationModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertAttention with Bert->BertGeneration
class BertGenerationAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = BertGenerationSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = BertGenerationSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->BertGeneration
class BertGenerationIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->BertGeneration
class BertGenerationOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLayer with Bert->BertGeneration
class BertGenerationLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = BertGenerationAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = BertGenerationAttention(config, position_embedding_type="absolute")
self.intermediate = BertGenerationIntermediate(config)
self.output = BertGenerationOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
# Copied from transformers.models.bert.modeling_bert.BertEncoder with Bert->BertGeneration
class BertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([BertGenerationLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
def load_tf_weights_in_bert_generation(
model, tf_hub_path, model_class, is_encoder_named_decoder=False, is_encoder=False
):
try:
import numpy as np
import tensorflow.compat.v1 as tf
import tensorflow_hub as hub
import tensorflow_text # noqa: F401
tf.disable_eager_execution()
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_model = hub.Module(tf_hub_path)
init = tf.global_variables_initializer()
with tf.Session() as sess:
init.run()
all_variables = tf_model.variable_map
keep_track_variables = all_variables.copy()
for key in list(all_variables.keys()):
if "global" in key:
logger.info(f"Skipping {key}...")
continue
if not is_encoder:
model_pointer = getattr(model, model_class)
else:
model_pointer = model
is_embedding = False
logger.info(f"Trying to match {key}...")
# remove start_string = "module/bert/"
sub_layers = key.split("/")[2:]
if is_encoder_named_decoder and sub_layers[0] == "encoder":
logger.info(f"Skipping encoder layer {key} for decoder")
continue
if is_encoder and sub_layers[0] == "decoder":
logger.info(f"Skipping decoder layer {key} for encoder")
continue
for i, sub_layer in enumerate(sub_layers):
if sub_layer == "embeddings":
is_embedding = True
elif sub_layer == "LayerNorm":
is_embedding = False
if "layer" in sub_layer:
model_pointer = model_pointer.layer[int(sub_layer.split("_")[-1])]
elif sub_layer in ["kernel", "gamma"]:
model_pointer = model_pointer.weight
elif sub_layer == "beta":
model_pointer = model_pointer.bias
elif sub_layer == "encdec":
model_pointer = model_pointer.crossattention.self
elif sub_layer == "encdec_output":
model_pointer = model_pointer.crossattention.output
elif is_encoder_named_decoder and sub_layer == "decoder":
model_pointer = model_pointer.encoder
else:
if sub_layer == "attention" and "encdec" in sub_layers[i + 1]:
continue
try:
model_pointer = getattr(model_pointer, sub_layer)
except AttributeError:
logger.info(f"Skipping to initialize {key} at {sub_layer}...")
raise AttributeError
array = np.asarray(sess.run(all_variables[key]))
if not is_embedding:
logger.info(f"Transposing numpy weight of shape {array.shape} for {key}")
array = np.transpose(array)
else:
model_pointer = model_pointer.weight
if model_pointer.shape != array.shape:
raise ValueError(f"Pointer shape {model_pointer.shape} and array shape {array.shape} mismatched")
logger.info(f"Initialize PyTorch weight {key}")
model_pointer.data = torch.from_numpy(array.astype(np.float32))
keep_track_variables.pop(key, None)
logger.info(f"Weights not copied to PyTorch model: {', '.join(keep_track_variables.keys())}")
return model
class BertGenerationEmbeddings(nn.Module):
"""Construct the embeddings from word and position embeddings."""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
def forward(self, input_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length]
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
position_embeddings = self.position_embeddings(position_ids)
embeddings = inputs_embeds + position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class BertGenerationPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BertGenerationConfig
base_model_prefix = "bert"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
BERT_GENERATION_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`BertGenerationConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
BERT_GENERATION_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare BertGeneration model transformer outputting raw hidden-states without any specific head on top.",
BERT_GENERATION_START_DOCSTRING,
)
class BertGenerationEncoder(BertGenerationPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
This model should be used when leveraging Bert or Roberta checkpoints for the [`EncoderDecoderModel`] class as
described in [Leveraging Pre-trained Checkpoints for Sequence Generation Tasks](https://arxiv.org/abs/1907.12461)
by Sascha Rothe, Shashi Narayan, and Aliaksei Severyn.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
def __init__(self, config):
super().__init__(config)
self.config = config
self.embeddings = BertGenerationEmbeddings(config)
self.encoder = BertEncoder(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(BERT_GENERATION_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPastAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPastAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`: `1` for
tokens that are NOT MASKED, `0` for MASKED tokens.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask = None
if not use_cache:
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
if not return_dict:
return (sequence_output,) + encoder_outputs[1:]
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=sequence_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
class BertGenerationOnlyLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.decoder = nn.Linear(config.hidden_size, config.vocab_size)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
self.decoder.bias = self.bias
def forward(self, hidden_states):
logits = self.decoder(hidden_states)
return logits
def _tie_weights(self):
# To tie those two weights if they get disconnected (on TPU or when the bias is resized)
self.bias = self.decoder.bias
@add_start_docstrings(
"""BertGeneration Model with a `language modeling` head on top for CLM fine-tuning.""",
BERT_GENERATION_START_DOCSTRING,
)
class BertGenerationDecoder(BertGenerationPreTrainedModel):
_tied_weights_keys = ["lm_head.decoder.weight", "lm_head.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if not config.is_decoder:
logger.warning("If you want to use `BertGenerationDecoder` as a standalone, add `is_decoder=True.`")
self.bert = BertGenerationEncoder(config)
self.lm_head = BertGenerationOnlyLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BERT_GENERATION_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CausalLMOutputWithCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, BertGenerationDecoder, BertGenerationConfig
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/bert_for_seq_generation_L-24_bbc_encoder")
>>> config = BertGenerationConfig.from_pretrained("google/bert_for_seq_generation_L-24_bbc_encoder")
>>> config.is_decoder = True
>>> model = BertGenerationDecoder.from_pretrained(
... "google/bert_for_seq_generation_L-24_bbc_encoder", config=config
... )
>>> inputs = tokenizer("Hello, my dog is cute", return_token_type_ids=False, return_tensors="pt")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
lm_loss = None
if labels is not None:
# we are doing next-token prediction; shift prediction scores and input ids by one
shifted_prediction_scores = prediction_scores[:, :-1, :].contiguous()
labels = labels[:, 1:].contiguous()
loss_fct = CrossEntropyLoss()
lm_loss = loss_fct(shifted_prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[1:]
return ((lm_loss,) + output) if lm_loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=lm_loss,
logits=prediction_scores,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_shape)
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
past_length = past_key_values[0][0].shape[2]
# Some generation methods already pass only the last input ID
if input_ids.shape[1] > past_length:
remove_prefix_length = past_length
else:
# Default to old behavior: keep only final ID
remove_prefix_length = input_ids.shape[1] - 1
input_ids = input_ids[:, remove_prefix_length:]
return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past_key_values}
def _reorder_cache(self, past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past),
)
return reordered_past
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/wav2vec2_with_lm/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import _LazyModule
_import_structure = {"processing_wav2vec2_with_lm": ["Wav2Vec2ProcessorWithLM"]}
if TYPE_CHECKING:
from .processing_wav2vec2_with_lm import Wav2Vec2ProcessorWithLM
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/wav2vec2_with_lm/processing_wav2vec2_with_lm.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Speech processor class for Wav2Vec2
"""
import os
import warnings
from contextlib import contextmanager, nullcontext
from dataclasses import dataclass
from multiprocessing import Pool, get_context, get_start_method
from typing import TYPE_CHECKING, Dict, Iterable, List, Optional, Union
import numpy as np
from ...processing_utils import ProcessorMixin
from ...utils import ModelOutput, logging, requires_backends
logger = logging.get_logger(__name__)
if TYPE_CHECKING:
from pyctcdecode import BeamSearchDecoderCTC
from ...feature_extraction_utils import FeatureExtractionMixin
from ...tokenization_utils import PreTrainedTokenizerBase
ListOfDict = List[Dict[str, Union[int, str]]]
@dataclass
class Wav2Vec2DecoderWithLMOutput(ModelOutput):
"""
Output type of [`Wav2Vec2DecoderWithLM`], with transcription.
Args:
text (list of `str` or `str`):
Decoded logits in text from. Usually the speech transcription.
logit_score (list of `float` or `float`):
Total logit score of the beams associated with produced text.
lm_score (list of `float`):
Fused lm_score of the beams associated with produced text.
word_offsets (list of `List[Dict[str, Union[int, str]]]` or `List[Dict[str, Union[int, str]]]`):
Offsets of the decoded words. In combination with sampling rate and model downsampling rate word offsets
can be used to compute time stamps for each word.
"""
text: Union[List[List[str]], List[str], str]
logit_score: Union[List[List[float]], List[float], float] = None
lm_score: Union[List[List[float]], List[float], float] = None
word_offsets: Union[List[List[ListOfDict]], List[ListOfDict], ListOfDict] = None
class Wav2Vec2ProcessorWithLM(ProcessorMixin):
r"""
Constructs a Wav2Vec2 processor which wraps a Wav2Vec2 feature extractor, a Wav2Vec2 CTC tokenizer and a decoder
with language model support into a single processor for language model boosted speech recognition decoding.
Args:
feature_extractor ([`Wav2Vec2FeatureExtractor`]):
An instance of [`Wav2Vec2FeatureExtractor`]. The feature extractor is a required input.
tokenizer ([`Wav2Vec2CTCTokenizer`]):
An instance of [`Wav2Vec2CTCTokenizer`]. The tokenizer is a required input.
decoder (`pyctcdecode.BeamSearchDecoderCTC`):
An instance of [`pyctcdecode.BeamSearchDecoderCTC`]. The decoder is a required input.
"""
feature_extractor_class = "Wav2Vec2FeatureExtractor"
tokenizer_class = "Wav2Vec2CTCTokenizer"
def __init__(
self,
feature_extractor: "FeatureExtractionMixin",
tokenizer: "PreTrainedTokenizerBase",
decoder: "BeamSearchDecoderCTC",
):
from pyctcdecode import BeamSearchDecoderCTC
super().__init__(feature_extractor, tokenizer)
if not isinstance(decoder, BeamSearchDecoderCTC):
raise ValueError(f"`decoder` has to be of type {BeamSearchDecoderCTC.__class__}, but is {type(decoder)}")
# make sure that decoder's alphabet and tokenizer's vocab match in content
missing_decoder_tokens = self.get_missing_alphabet_tokens(decoder, tokenizer)
if len(missing_decoder_tokens) > 0:
raise ValueError(
f"The tokens {missing_decoder_tokens} are defined in the tokenizer's "
"vocabulary, but not in the decoder's alphabet. "
f"Make sure to include {missing_decoder_tokens} in the decoder's alphabet."
)
self.decoder = decoder
self.current_processor = self.feature_extractor
self._in_target_context_manager = False
def save_pretrained(self, save_directory):
super().save_pretrained(save_directory)
self.decoder.save_to_dir(save_directory)
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path, **kwargs):
r"""
Instantiate a [`Wav2Vec2ProcessorWithLM`] from a pretrained Wav2Vec2 processor.
<Tip>
This class method is simply calling Wav2Vec2FeatureExtractor's
[`~feature_extraction_utils.FeatureExtractionMixin.from_pretrained`], Wav2Vec2CTCTokenizer's
[`~tokenization_utils_base.PreTrainedTokenizerBase.from_pretrained`], and
[`pyctcdecode.BeamSearchDecoderCTC.load_from_hf_hub`].
Please refer to the docstrings of the methods above for more information.
</Tip>
Args:
pretrained_model_name_or_path (`str` or `os.PathLike`):
This can be either:
- a string, the *model id* of a pretrained feature_extractor hosted inside a model repo on
huggingface.co. Valid model ids can be located at the root-level, like `bert-base-uncased`, or
namespaced under a user or organization name, like `dbmdz/bert-base-german-cased`.
- a path to a *directory* containing a feature extractor file saved using the
[`~SequenceFeatureExtractor.save_pretrained`] method, e.g., `./my_model_directory/`.
- a path or url to a saved feature extractor JSON *file*, e.g.,
`./my_model_directory/preprocessor_config.json`.
**kwargs
Additional keyword arguments passed along to both [`SequenceFeatureExtractor`] and
[`PreTrainedTokenizer`]
"""
requires_backends(cls, "pyctcdecode")
from pyctcdecode import BeamSearchDecoderCTC
feature_extractor, tokenizer = super()._get_arguments_from_pretrained(pretrained_model_name_or_path, **kwargs)
if os.path.isdir(pretrained_model_name_or_path) or os.path.isfile(pretrained_model_name_or_path):
decoder = BeamSearchDecoderCTC.load_from_dir(pretrained_model_name_or_path)
else:
# BeamSearchDecoderCTC has no auto class
kwargs.pop("_from_auto", None)
# snapshot_download has no `trust_remote_code` flag
kwargs.pop("trust_remote_code", None)
# make sure that only relevant filenames are downloaded
language_model_filenames = os.path.join(BeamSearchDecoderCTC._LANGUAGE_MODEL_SERIALIZED_DIRECTORY, "*")
alphabet_filename = BeamSearchDecoderCTC._ALPHABET_SERIALIZED_FILENAME
allow_patterns = [language_model_filenames, alphabet_filename]
decoder = BeamSearchDecoderCTC.load_from_hf_hub(
pretrained_model_name_or_path, allow_patterns=allow_patterns, **kwargs
)
# set language model attributes
for attribute in ["alpha", "beta", "unk_score_offset", "score_boundary"]:
value = kwargs.pop(attribute, None)
if value is not None:
cls._set_language_model_attribute(decoder, attribute, value)
# make sure that decoder's alphabet and tokenizer's vocab match in content
missing_decoder_tokens = cls.get_missing_alphabet_tokens(decoder, tokenizer)
if len(missing_decoder_tokens) > 0:
raise ValueError(
f"The tokens {missing_decoder_tokens} are defined in the tokenizer's "
"vocabulary, but not in the decoder's alphabet. "
f"Make sure to include {missing_decoder_tokens} in the decoder's alphabet."
)
return cls(feature_extractor=feature_extractor, tokenizer=tokenizer, decoder=decoder)
@staticmethod
def _set_language_model_attribute(decoder: "BeamSearchDecoderCTC", attribute: str, value: float):
setattr(decoder.model_container[decoder._model_key], attribute, value)
@property
def language_model(self):
return self.decoder.model_container[self.decoder._model_key]
@staticmethod
def get_missing_alphabet_tokens(decoder, tokenizer):
from pyctcdecode.alphabet import BLANK_TOKEN_PTN, UNK_TOKEN, UNK_TOKEN_PTN
# we need to make sure that all of the tokenizer's except the special tokens
# are present in the decoder's alphabet. Retrieve missing alphabet token
# from decoder
tokenizer_vocab_list = list(tokenizer.get_vocab().keys())
# replace special tokens
for i, token in enumerate(tokenizer_vocab_list):
if BLANK_TOKEN_PTN.match(token):
tokenizer_vocab_list[i] = ""
if token == tokenizer.word_delimiter_token:
tokenizer_vocab_list[i] = " "
if UNK_TOKEN_PTN.match(token):
tokenizer_vocab_list[i] = UNK_TOKEN
# are any of the extra tokens no special tokenizer tokens?
missing_tokens = set(tokenizer_vocab_list) - set(decoder._alphabet.labels)
return missing_tokens
def __call__(self, *args, **kwargs):
"""
When used in normal mode, this method forwards all its arguments to Wav2Vec2FeatureExtractor's
[`~Wav2Vec2FeatureExtractor.__call__`] and returns its output. If used in the context
[`~Wav2Vec2ProcessorWithLM.as_target_processor`] this method forwards all its arguments to
Wav2Vec2CTCTokenizer's [`~Wav2Vec2CTCTokenizer.__call__`]. Please refer to the docstring of the above two
methods for more information.
"""
# For backward compatibility
if self._in_target_context_manager:
return self.current_processor(*args, **kwargs)
if "raw_speech" in kwargs:
warnings.warn("Using `raw_speech` as a keyword argument is deprecated. Use `audio` instead.")
audio = kwargs.pop("raw_speech")
else:
audio = kwargs.pop("audio", None)
sampling_rate = kwargs.pop("sampling_rate", None)
text = kwargs.pop("text", None)
if len(args) > 0:
audio = args[0]
args = args[1:]
if audio is None and text is None:
raise ValueError("You need to specify either an `audio` or `text` input to process.")
if audio is not None:
inputs = self.feature_extractor(audio, *args, sampling_rate=sampling_rate, **kwargs)
if text is not None:
encodings = self.tokenizer(text, **kwargs)
if text is None:
return inputs
elif audio is None:
return encodings
else:
inputs["labels"] = encodings["input_ids"]
return inputs
def pad(self, *args, **kwargs):
"""
When used in normal mode, this method forwards all its arguments to Wav2Vec2FeatureExtractor's
[`~Wav2Vec2FeatureExtractor.pad`] and returns its output. If used in the context
[`~Wav2Vec2ProcessorWithLM.as_target_processor`] this method forwards all its arguments to
Wav2Vec2CTCTokenizer's [`~Wav2Vec2CTCTokenizer.pad`]. Please refer to the docstring of the above two methods
for more information.
"""
# For backward compatibility
if self._in_target_context_manager:
return self.current_processor.pad(*args, **kwargs)
input_features = kwargs.pop("input_features", None)
labels = kwargs.pop("labels", None)
if len(args) > 0:
input_features = args[0]
args = args[1:]
if input_features is not None:
input_features = self.feature_extractor.pad(input_features, *args, **kwargs)
if labels is not None:
labels = self.tokenizer.pad(labels, **kwargs)
if labels is None:
return input_features
elif input_features is None:
return labels
else:
input_features["labels"] = labels["input_ids"]
return input_features
def batch_decode(
self,
logits: np.ndarray,
pool: Optional[Pool] = None,
num_processes: Optional[int] = None,
beam_width: Optional[int] = None,
beam_prune_logp: Optional[float] = None,
token_min_logp: Optional[float] = None,
hotwords: Optional[Iterable[str]] = None,
hotword_weight: Optional[float] = None,
alpha: Optional[float] = None,
beta: Optional[float] = None,
unk_score_offset: Optional[float] = None,
lm_score_boundary: Optional[bool] = None,
output_word_offsets: bool = False,
n_best: int = 1,
):
"""
Batch decode output logits to audio transcription with language model support.
<Tip>
This function makes use of Python's multiprocessing. Currently, multiprocessing is available only on Unix
systems (see this [issue](https://github.com/kensho-technologies/pyctcdecode/issues/65)).
If you are decoding multiple batches, consider creating a `Pool` and passing it to `batch_decode`. Otherwise,
`batch_decode` will be very slow since it will create a fresh `Pool` for each call. See usage example below.
</Tip>
Args:
logits (`np.ndarray`):
The logits output vector of the model representing the log probabilities for each token.
pool (`multiprocessing.Pool`, *optional*):
An optional user-managed pool. If not set, one will be automatically created and closed. The pool
should be instantiated *after* `Wav2Vec2ProcessorWithLM`. Otherwise, the LM won't be available to the
pool's sub-processes.
<Tip>
Currently, only pools created with a 'fork' context can be used. If a 'spawn' pool is passed, it will
be ignored and sequential decoding will be used instead.
</Tip>
num_processes (`int`, *optional*):
If `pool` is not set, number of processes on which the function should be parallelized over. Defaults
to the number of available CPUs.
beam_width (`int`, *optional*):
Maximum number of beams at each step in decoding. Defaults to pyctcdecode's DEFAULT_BEAM_WIDTH.
beam_prune_logp (`int`, *optional*):
Beams that are much worse than best beam will be pruned Defaults to pyctcdecode's DEFAULT_PRUNE_LOGP.
token_min_logp (`int`, *optional*):
Tokens below this logp are skipped unless they are argmax of frame Defaults to pyctcdecode's
DEFAULT_MIN_TOKEN_LOGP.
hotwords (`List[str]`, *optional*):
List of words with extra importance, can be OOV for LM
hotword_weight (`int`, *optional*):
Weight factor for hotword importance Defaults to pyctcdecode's DEFAULT_HOTWORD_WEIGHT.
alpha (`float`, *optional*):
Weight for language model during shallow fusion
beta (`float`, *optional*):
Weight for length score adjustment of during scoring
unk_score_offset (`float`, *optional*):
Amount of log score offset for unknown tokens
lm_score_boundary (`bool`, *optional*):
Whether to have kenlm respect boundaries when scoring
output_word_offsets (`bool`, *optional*, defaults to `False`):
Whether or not to output word offsets. Word offsets can be used in combination with the sampling rate
and model downsampling rate to compute the time-stamps of transcribed words.
n_best (`int`, *optional*, defaults to `1`):
Number of best hypotheses to return. If `n_best` is greater than 1, the returned `text` will be a list
of lists of strings, `logit_score` will be a list of lists of floats, and `lm_score` will be a list of
lists of floats, where the length of the outer list will correspond to the batch size and the length of
the inner list will correspond to the number of returned hypotheses . The value should be >= 1.
<Tip>
Please take a look at the Example of [`~Wav2Vec2ProcessorWithLM.decode`] to better understand how to
make use of `output_word_offsets`. [`~Wav2Vec2ProcessorWithLM.batch_decode`] works the same way with
batched output.
</Tip>
Returns:
[`~models.wav2vec2.Wav2Vec2DecoderWithLMOutput`].
Example:
See [Decoding multiple audios](#decoding-multiple-audios).
"""
from pyctcdecode.constants import (
DEFAULT_BEAM_WIDTH,
DEFAULT_HOTWORD_WEIGHT,
DEFAULT_MIN_TOKEN_LOGP,
DEFAULT_PRUNE_LOGP,
)
# set defaults
beam_width = beam_width if beam_width is not None else DEFAULT_BEAM_WIDTH
beam_prune_logp = beam_prune_logp if beam_prune_logp is not None else DEFAULT_PRUNE_LOGP
token_min_logp = token_min_logp if token_min_logp is not None else DEFAULT_MIN_TOKEN_LOGP
hotword_weight = hotword_weight if hotword_weight is not None else DEFAULT_HOTWORD_WEIGHT
# reset params at every forward call. It's just a `set` method in pyctcdecode
self.decoder.reset_params(
alpha=alpha, beta=beta, unk_score_offset=unk_score_offset, lm_score_boundary=lm_score_boundary
)
# create multiprocessing pool and list numpy arrays
# filter out logits padding
logits_list = [array[(array != -100.0).all(axis=-1)] for array in logits]
# create a pool if necessary while also using it as a context manager to close itself
if pool is None:
# fork is safe to use only on Unix, see "Contexts and start methods" section on
# multiprocessing's docs (https://docs.python.org/3/library/multiprocessing.html#contexts-and-start-methods)
default_context = get_start_method()
if default_context == "fork":
cm = pool = get_context().Pool(num_processes)
else:
logger.warning(
"Parallel batch decoding is not currently supported in this platform. "
"Falling back to sequential decoding."
)
cm = nullcontext()
else:
# pool is managed by the user, so we don't need to close it
cm = nullcontext()
if num_processes is not None:
logger.warning(
"Parameter `num_process` was passed, but it will be ignored since `pool` was also specified."
)
# pyctcdecode
with cm:
decoded_beams = self.decoder.decode_beams_batch(
pool=pool,
logits_list=logits_list,
beam_width=beam_width,
beam_prune_logp=beam_prune_logp,
token_min_logp=token_min_logp,
hotwords=hotwords,
hotword_weight=hotword_weight,
)
# extract text and scores
batch_texts, logit_scores, lm_scores, word_offsets = [], [], [], []
for d in decoded_beams:
batch_texts.append([beam[0] for beam in d])
logit_scores.append([beam[-2] for beam in d])
lm_scores.append([beam[-1] for beam in d])
# word_offsets.append([{"word": t[0], "start_offset": t[1][0], "end_offset": t[1][1]} for t in d[0][1]])
word_offsets.append(
[
[
{"word": word, "start_offset": start_offset, "end_offset": end_offset}
for word, (start_offset, end_offset) in beam[1]
]
for beam in d
]
)
word_offsets = word_offsets if output_word_offsets else None
if n_best == 1:
return Wav2Vec2DecoderWithLMOutput(
text=[hyps[0] for hyps in batch_texts],
logit_score=[hyps[0] for hyps in logit_scores],
lm_score=[hyps[0] for hyps in lm_scores],
word_offsets=[hyps[0] for hyps in word_offsets] if word_offsets is not None else None,
)
else:
return Wav2Vec2DecoderWithLMOutput(
text=[hyps[:n_best] for hyps in batch_texts],
logit_score=[hyps[:n_best] for hyps in logit_scores],
lm_score=[hyps[:n_best] for hyps in lm_scores],
word_offsets=[hyps[:n_best] for hyps in word_offsets] if word_offsets is not None else None,
)
def decode(
self,
logits: np.ndarray,
beam_width: Optional[int] = None,
beam_prune_logp: Optional[float] = None,
token_min_logp: Optional[float] = None,
hotwords: Optional[Iterable[str]] = None,
hotword_weight: Optional[float] = None,
alpha: Optional[float] = None,
beta: Optional[float] = None,
unk_score_offset: Optional[float] = None,
lm_score_boundary: Optional[bool] = None,
output_word_offsets: bool = False,
n_best: int = 1,
):
"""
Decode output logits to audio transcription with language model support.
Args:
logits (`np.ndarray`):
The logits output vector of the model representing the log probabilities for each token.
beam_width (`int`, *optional*):
Maximum number of beams at each step in decoding. Defaults to pyctcdecode's DEFAULT_BEAM_WIDTH.
beam_prune_logp (`int`, *optional*):
A threshold to prune beams with log-probs less than best_beam_logp + beam_prune_logp. The value should
be <= 0. Defaults to pyctcdecode's DEFAULT_PRUNE_LOGP.
token_min_logp (`int`, *optional*):
Tokens with log-probs below token_min_logp are skipped unless they are have the maximum log-prob for an
utterance. Defaults to pyctcdecode's DEFAULT_MIN_TOKEN_LOGP.
hotwords (`List[str]`, *optional*):
List of words with extra importance which can be missing from the LM's vocabulary, e.g. ["huggingface"]
hotword_weight (`int`, *optional*):
Weight multiplier that boosts hotword scores. Defaults to pyctcdecode's DEFAULT_HOTWORD_WEIGHT.
alpha (`float`, *optional*):
Weight for language model during shallow fusion
beta (`float`, *optional*):
Weight for length score adjustment of during scoring
unk_score_offset (`float`, *optional*):
Amount of log score offset for unknown tokens
lm_score_boundary (`bool`, *optional*):
Whether to have kenlm respect boundaries when scoring
output_word_offsets (`bool`, *optional*, defaults to `False`):
Whether or not to output word offsets. Word offsets can be used in combination with the sampling rate
and model downsampling rate to compute the time-stamps of transcribed words.
n_best (`int`, *optional*, defaults to `1`):
Number of best hypotheses to return. If `n_best` is greater than 1, the returned `text` will be a list
of strings, `logit_score` will be a list of floats, and `lm_score` will be a list of floats, where the
length of these lists will correspond to the number of returned hypotheses. The value should be >= 1.
<Tip>
Please take a look at the example below to better understand how to make use of `output_word_offsets`.
</Tip>
Returns:
[`~models.wav2vec2.Wav2Vec2DecoderWithLMOutput`].
Example:
```python
>>> # Let's see how to retrieve time steps for a model
>>> from transformers import AutoTokenizer, AutoProcessor, AutoModelForCTC
>>> from datasets import load_dataset
>>> import datasets
>>> import torch
>>> # import model, feature extractor, tokenizer
>>> model = AutoModelForCTC.from_pretrained("patrickvonplaten/wav2vec2-base-100h-with-lm")
>>> processor = AutoProcessor.from_pretrained("patrickvonplaten/wav2vec2-base-100h-with-lm")
>>> # load first sample of English common_voice
>>> dataset = load_dataset("mozilla-foundation/common_voice_11_0", "en", split="train", streaming=True)
>>> dataset = dataset.cast_column("audio", datasets.Audio(sampling_rate=16_000))
>>> dataset_iter = iter(dataset)
>>> sample = next(dataset_iter)
>>> # forward sample through model to get greedily predicted transcription ids
>>> input_values = processor(sample["audio"]["array"], return_tensors="pt").input_values
>>> with torch.no_grad():
... logits = model(input_values).logits[0].cpu().numpy()
>>> # retrieve word stamps (analogous commands for `output_char_offsets`)
>>> outputs = processor.decode(logits, output_word_offsets=True)
>>> # compute `time_offset` in seconds as product of downsampling ratio and sampling_rate
>>> time_offset = model.config.inputs_to_logits_ratio / processor.feature_extractor.sampling_rate
>>> word_offsets = [
... {
... "word": d["word"],
... "start_time": round(d["start_offset"] * time_offset, 2),
... "end_time": round(d["end_offset"] * time_offset, 2),
... }
... for d in outputs.word_offsets
... ]
>>> # compare word offsets with audio `en_train_0/common_voice_en_19121553.mp3` online on the dataset viewer:
>>> # https://huggingface.co/datasets/mozilla-foundation/common_voice_11_0/viewer/en
>>> word_offsets[:4]
[{'word': 'THE', 'start_time': 0.68, 'end_time': 0.78}, {'word': 'TRACK', 'start_time': 0.88, 'end_time': 1.1}, {'word': 'APPEARS', 'start_time': 1.18, 'end_time': 1.66}, {'word': 'ON', 'start_time': 1.86, 'end_time': 1.92}]
```"""
from pyctcdecode.constants import (
DEFAULT_BEAM_WIDTH,
DEFAULT_HOTWORD_WEIGHT,
DEFAULT_MIN_TOKEN_LOGP,
DEFAULT_PRUNE_LOGP,
)
# set defaults
beam_width = beam_width if beam_width is not None else DEFAULT_BEAM_WIDTH
beam_prune_logp = beam_prune_logp if beam_prune_logp is not None else DEFAULT_PRUNE_LOGP
token_min_logp = token_min_logp if token_min_logp is not None else DEFAULT_MIN_TOKEN_LOGP
hotword_weight = hotword_weight if hotword_weight is not None else DEFAULT_HOTWORD_WEIGHT
# reset params at every forward call. It's just a `set` method in pyctcdecode
self.decoder.reset_params(
alpha=alpha, beta=beta, unk_score_offset=unk_score_offset, lm_score_boundary=lm_score_boundary
)
# pyctcdecode
decoded_beams = self.decoder.decode_beams(
logits,
beam_width=beam_width,
beam_prune_logp=beam_prune_logp,
token_min_logp=token_min_logp,
hotwords=hotwords,
hotword_weight=hotword_weight,
)
word_offsets = None
if output_word_offsets:
word_offsets = [
[
{"word": word, "start_offset": start_offset, "end_offset": end_offset}
for word, (start_offset, end_offset) in beam[2]
]
for beam in decoded_beams
]
logit_scores = [beam[-2] for beam in decoded_beams]
lm_scores = [beam[-1] for beam in decoded_beams]
hypotheses = [beam[0] for beam in decoded_beams]
if n_best > len(decoded_beams):
logger.info(
"N-best size is larger than the number of generated hypotheses, all hypotheses will be returned."
)
if n_best == 1:
return Wav2Vec2DecoderWithLMOutput(
text=hypotheses[0],
logit_score=logit_scores[0],
lm_score=lm_scores[0],
word_offsets=word_offsets[0] if word_offsets is not None else None,
)
else:
return Wav2Vec2DecoderWithLMOutput(
text=hypotheses[:n_best],
logit_score=logit_scores[:n_best],
lm_score=lm_scores[:n_best],
word_offsets=word_offsets[:n_best] if word_offsets is not None else None,
)
@contextmanager
def as_target_processor(self):
"""
Temporarily sets the processor for processing the target. Useful for encoding the labels when fine-tuning
Wav2Vec2.
"""
warnings.warn(
"`as_target_processor` is deprecated and will be removed in v5 of Transformers. You can process your "
"labels by using the argument `text` of the regular `__call__` method (either in the same call as "
"your audio inputs, or in a separate call."
)
self._in_target_context_manager = True
self.current_processor = self.tokenizer
yield
self.current_processor = self.feature_extractor
self._in_target_context_manager = False
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/vit_msn/convert_msn_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert ViT MSN checkpoints from the original repository: https://github.com/facebookresearch/msn"""
import argparse
import json
import requests
import torch
from huggingface_hub import hf_hub_download
from PIL import Image
from transformers import ViTImageProcessor, ViTMSNConfig, ViTMSNModel
from transformers.image_utils import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD
torch.set_grad_enabled(False)
# here we list all keys to be renamed (original name on the left, our name on the right)
def create_rename_keys(config, base_model=False):
rename_keys = []
for i in range(config.num_hidden_layers):
# encoder layers: output projection, 2 feedforward neural networks and 2 layernorms
rename_keys.append((f"module.blocks.{i}.norm1.weight", f"vit.encoder.layer.{i}.layernorm_before.weight"))
rename_keys.append((f"module.blocks.{i}.norm1.bias", f"vit.encoder.layer.{i}.layernorm_before.bias"))
rename_keys.append(
(f"module.blocks.{i}.attn.proj.weight", f"vit.encoder.layer.{i}.attention.output.dense.weight")
)
rename_keys.append((f"module.blocks.{i}.attn.proj.bias", f"vit.encoder.layer.{i}.attention.output.dense.bias"))
rename_keys.append((f"module.blocks.{i}.norm2.weight", f"vit.encoder.layer.{i}.layernorm_after.weight"))
rename_keys.append((f"module.blocks.{i}.norm2.bias", f"vit.encoder.layer.{i}.layernorm_after.bias"))
rename_keys.append((f"module.blocks.{i}.mlp.fc1.weight", f"vit.encoder.layer.{i}.intermediate.dense.weight"))
rename_keys.append((f"module.blocks.{i}.mlp.fc1.bias", f"vit.encoder.layer.{i}.intermediate.dense.bias"))
rename_keys.append((f"module.blocks.{i}.mlp.fc2.weight", f"vit.encoder.layer.{i}.output.dense.weight"))
rename_keys.append((f"module.blocks.{i}.mlp.fc2.bias", f"vit.encoder.layer.{i}.output.dense.bias"))
# projection layer + position embeddings
rename_keys.extend(
[
("module.cls_token", "vit.embeddings.cls_token"),
("module.patch_embed.proj.weight", "vit.embeddings.patch_embeddings.projection.weight"),
("module.patch_embed.proj.bias", "vit.embeddings.patch_embeddings.projection.bias"),
("module.pos_embed", "vit.embeddings.position_embeddings"),
]
)
if base_model:
# layernorm + pooler
rename_keys.extend(
[
("module.norm.weight", "layernorm.weight"),
("module.norm.bias", "layernorm.bias"),
]
)
# if just the base model, we should remove "vit" from all keys that start with "vit"
rename_keys = [(pair[0], pair[1][4:]) if pair[1].startswith("vit") else pair for pair in rename_keys]
else:
# layernorm + classification head
rename_keys.extend(
[
("norm.weight", "vit.layernorm.weight"),
("norm.bias", "vit.layernorm.bias"),
("head.weight", "classifier.weight"),
("head.bias", "classifier.bias"),
]
)
return rename_keys
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_q_k_v(state_dict, config, base_model=False):
for i in range(config.num_hidden_layers):
if base_model:
prefix = ""
else:
prefix = "vit."
# read in weights + bias of input projection layer (in timm, this is a single matrix + bias)
in_proj_weight = state_dict.pop(f"module.blocks.{i}.attn.qkv.weight")
in_proj_bias = state_dict.pop(f"module.blocks.{i}.attn.qkv.bias")
# next, add query, keys and values (in that order) to the state dict
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.query.weight"] = in_proj_weight[
: config.hidden_size, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.query.bias"] = in_proj_bias[: config.hidden_size]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.key.weight"] = in_proj_weight[
config.hidden_size : config.hidden_size * 2, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.key.bias"] = in_proj_bias[
config.hidden_size : config.hidden_size * 2
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.value.weight"] = in_proj_weight[
-config.hidden_size :, :
]
state_dict[f"{prefix}encoder.layer.{i}.attention.attention.value.bias"] = in_proj_bias[-config.hidden_size :]
def remove_classification_head_(state_dict):
ignore_keys = ["head.weight", "head.bias"]
for k in ignore_keys:
state_dict.pop(k, None)
def remove_projection_head(state_dict):
# projection head is used in the self-supervised pre-training in MSN,
# for downstream task it's not needed.
ignore_keys = [
"module.fc.fc1.weight",
"module.fc.fc1.bias",
"module.fc.bn1.weight",
"module.fc.bn1.bias",
"module.fc.bn1.running_mean",
"module.fc.bn1.running_var",
"module.fc.bn1.num_batches_tracked",
"module.fc.fc2.weight",
"module.fc.fc2.bias",
"module.fc.bn2.weight",
"module.fc.bn2.bias",
"module.fc.bn2.running_mean",
"module.fc.bn2.running_var",
"module.fc.bn2.num_batches_tracked",
"module.fc.fc3.weight",
"module.fc.fc3.bias",
]
for k in ignore_keys:
state_dict.pop(k, None)
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
def convert_vit_msn_checkpoint(checkpoint_url, pytorch_dump_folder_path):
config = ViTMSNConfig()
config.num_labels = 1000
repo_id = "datasets/huggingface/label-files"
filename = "imagenet-1k-id2label.json"
id2label = json.load(open(hf_hub_download(repo_id, filename), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
if "s16" in checkpoint_url:
config.hidden_size = 384
config.intermediate_size = 1536
config.num_attention_heads = 6
elif "l16" in checkpoint_url:
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
config.hidden_dropout_prob = 0.1
elif "b4" in checkpoint_url:
config.patch_size = 4
elif "l7" in checkpoint_url:
config.patch_size = 7
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
config.hidden_dropout_prob = 0.1
model = ViTMSNModel(config)
state_dict = torch.hub.load_state_dict_from_url(checkpoint_url, map_location="cpu")["target_encoder"]
image_processor = ViTImageProcessor(size=config.image_size)
remove_projection_head(state_dict)
rename_keys = create_rename_keys(config, base_model=True)
for src, dest in rename_keys:
rename_key(state_dict, src, dest)
read_in_q_k_v(state_dict, config, base_model=True)
model.load_state_dict(state_dict)
model.eval()
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
image = Image.open(requests.get(url, stream=True).raw)
image_processor = ViTImageProcessor(
size=config.image_size, image_mean=IMAGENET_DEFAULT_MEAN, image_std=IMAGENET_DEFAULT_STD
)
inputs = image_processor(images=image, return_tensors="pt")
# forward pass
torch.manual_seed(2)
outputs = model(**inputs)
last_hidden_state = outputs.last_hidden_state
# The following Colab Notebook was used to generate these outputs:
# https://colab.research.google.com/gist/sayakpaul/3672419a04f5997827503fd84079bdd1/scratchpad.ipynb
if "s16" in checkpoint_url:
expected_slice = torch.tensor([[-1.0915, -1.4876, -1.1809]])
elif "b16" in checkpoint_url:
expected_slice = torch.tensor([[14.2889, -18.9045, 11.7281]])
elif "l16" in checkpoint_url:
expected_slice = torch.tensor([[41.5028, -22.8681, 45.6475]])
elif "b4" in checkpoint_url:
expected_slice = torch.tensor([[-4.3868, 5.2932, -0.4137]])
else:
expected_slice = torch.tensor([[-0.1792, -0.6465, 2.4263]])
# verify logits
assert torch.allclose(last_hidden_state[:, 0, :3], expected_slice, atol=1e-4)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving image processor to {pytorch_dump_folder_path}")
image_processor.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--checkpoint_url",
default="https://dl.fbaipublicfiles.com/msn/vits16_800ep.pth.tar",
type=str,
help="URL of the checkpoint you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model directory."
)
args = parser.parse_args()
convert_vit_msn_checkpoint(args.checkpoint_url, args.pytorch_dump_folder_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/vit_msn/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {"configuration_vit_msn": ["VIT_MSN_PRETRAINED_CONFIG_ARCHIVE_MAP", "ViTMSNConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_vit_msn"] = [
"VIT_MSN_PRETRAINED_MODEL_ARCHIVE_LIST",
"ViTMSNModel",
"ViTMSNForImageClassification",
"ViTMSNPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_vit_msn import VIT_MSN_PRETRAINED_CONFIG_ARCHIVE_MAP, ViTMSNConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_vit_msn import (
VIT_MSN_PRETRAINED_MODEL_ARCHIVE_LIST,
ViTMSNForImageClassification,
ViTMSNModel,
ViTMSNPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/vit_msn/configuration_vit_msn.py | # coding=utf-8
# Copyright 2022 Facebook AI and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" ViT MSN model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
VIT_MSN_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"sayakpaul/vit-msn-base": "https://huggingface.co/sayakpaul/vit-msn-base/resolve/main/config.json",
# See all ViT MSN models at https://huggingface.co/models?filter=vit_msn
}
class ViTMSNConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`ViTMSNModel`]. It is used to instantiate an ViT
MSN model according to the specified arguments, defining the model architecture. Instantiating a configuration with
the defaults will yield a similar configuration to that of the ViT
[facebook/vit_msn_base](https://huggingface.co/facebook/vit_msn_base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-06):
The epsilon used by the layer normalization layers.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
qkv_bias (`bool`, *optional*, defaults to `True`):
Whether to add a bias to the queries, keys and values.
Example:
```python
>>> from transformers import ViTMSNModel, ViTMSNConfig
>>> # Initializing a ViT MSN vit-msn-base style configuration
>>> configuration = ViTConfig()
>>> # Initializing a model from the vit-msn-base style configuration
>>> model = ViTMSNModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "vit_msn"
def __init__(
self,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-06,
image_size=224,
patch_size=16,
num_channels=3,
qkv_bias=True,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.qkv_bias = qkv_bias
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/vit_msn/modeling_vit_msn.py | # coding=utf-8
# Copyright 2022 Facebook AI and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ViT MSN (masked siamese network) model."""
import collections.abc
import math
from typing import Dict, List, Optional, Set, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, ImageClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_vit_msn import ViTMSNConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "ViTMSNConfig"
_CHECKPOINT_FOR_DOC = "facebook/vit-msn-small"
VIT_MSN_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/vit-msn-small",
# See all ViTMSN models at https://huggingface.co/models?filter=vit_msn
]
class ViTMSNEmbeddings(nn.Module):
"""
Construct the CLS token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: ViTMSNConfig, use_mask_token: bool = False) -> None:
super().__init__()
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.mask_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size)) if use_mask_token else None
self.patch_embeddings = ViTMSNPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.hidden_size))
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.config = config
def interpolate_pos_encoding(self, embeddings: torch.Tensor, height: int, width: int) -> torch.Tensor:
"""
This method allows to interpolate the pre-trained position encodings, to be able to use the model on higher
resolution images.
Source:
https://github.com/facebookresearch/dino/blob/de9ee3df6cf39fac952ab558447af1fa1365362a/vision_transformer.py#L174
"""
num_patches = embeddings.shape[1] - 1
num_positions = self.position_embeddings.shape[1] - 1
if num_patches == num_positions and height == width:
return self.position_embeddings
class_pos_embed = self.position_embeddings[:, 0]
patch_pos_embed = self.position_embeddings[:, 1:]
dim = embeddings.shape[-1]
patch_window_height = height // self.config.patch_size
patch_window_width = width // self.config.patch_size
# we add a small number to avoid floating point error in the interpolation
# see discussion at https://github.com/facebookresearch/dino/issues/8
patch_window_height, patch_window_width = patch_window_height + 0.1, patch_window_width + 0.1
patch_pos_embed = patch_pos_embed.reshape(1, int(math.sqrt(num_positions)), int(math.sqrt(num_positions)), dim)
patch_pos_embed = patch_pos_embed.permute(0, 3, 1, 2)
patch_pos_embed = nn.functional.interpolate(
patch_pos_embed,
scale_factor=(
patch_window_height / math.sqrt(num_positions),
patch_window_width / math.sqrt(num_positions),
),
mode="bicubic",
align_corners=False,
)
patch_pos_embed = patch_pos_embed.permute(0, 2, 3, 1).view(1, -1, dim)
return torch.cat((class_pos_embed.unsqueeze(0), patch_pos_embed), dim=1)
def forward(
self,
pixel_values: torch.Tensor,
bool_masked_pos: Optional[torch.BoolTensor] = None,
interpolate_pos_encoding: bool = False,
) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
embeddings = self.patch_embeddings(pixel_values, interpolate_pos_encoding=interpolate_pos_encoding)
if bool_masked_pos is not None:
seq_length = embeddings.shape[1]
mask_tokens = self.mask_token.expand(batch_size, seq_length, -1)
# replace the masked visual tokens by mask_tokens
mask = bool_masked_pos.unsqueeze(-1).type_as(mask_tokens)
embeddings = embeddings * (1.0 - mask) + mask_tokens * mask
# add the [CLS] token to the embedded patch tokens
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
# add positional encoding to each token
if interpolate_pos_encoding:
embeddings = embeddings + self.interpolate_pos_encoding(embeddings, height, width)
else:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
# Copied from transformers.models.vit.modeling_vit.ViTPatchEmbeddings with ViT->ViTMSN
class ViTMSNPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values: torch.Tensor, interpolate_pos_encoding: bool = False) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
f" Expected {self.num_channels} but got {num_channels}."
)
if not interpolate_pos_encoding:
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model"
f" ({self.image_size[0]}*{self.image_size[1]})."
)
embeddings = self.projection(pixel_values).flatten(2).transpose(1, 2)
return embeddings
# Copied from transformers.models.vit.modeling_vit.ViTSelfAttention with ViT->ViTMSN
class ViTMSNSelfAttention(nn.Module):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self, hidden_states, head_mask: Optional[torch.Tensor] = None, output_attentions: bool = False
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTSelfOutput with ViT->ViTMSN
class ViTMSNSelfOutput(nn.Module):
"""
The residual connection is defined in ViTMSNLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTAttention with ViT->ViTMSN
class ViTMSNAttention(nn.Module):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.attention = ViTMSNSelfAttention(config)
self.output = ViTMSNSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads: Set[int]) -> None:
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_outputs = self.attention(hidden_states, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTIntermediate with ViT->ViTMSN
class ViTMSNIntermediate(nn.Module):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTOutput with ViT->ViTMSN
class ViTMSNOutput(nn.Module):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTLayer with ViT->ViTMSN
class ViTMSNLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = ViTMSNAttention(config)
self.intermediate = ViTMSNIntermediate(config)
self.output = ViTMSNOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in ViTMSN, layernorm is applied before self-attention
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# first residual connection
hidden_states = attention_output + hidden_states
# in ViTMSN, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
# second residual connection is done here
layer_output = self.output(layer_output, hidden_states)
outputs = (layer_output,) + outputs
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTEncoder with ViT->ViTMSN
class ViTMSNEncoder(nn.Module):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__()
self.config = config
self.layer = nn.ModuleList([ViTMSNLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
layer_head_mask,
output_attentions,
)
else:
layer_outputs = layer_module(hidden_states, layer_head_mask, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class ViTMSNPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = ViTMSNConfig
base_model_prefix = "vit"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
# todo: Resort to https://github.com/facebookresearch/msn/blob/main/src/deit.py#L200-#L211
# when creating pre-training scripts.
def _init_weights(self, module: Union[nn.Linear, nn.Conv2d, nn.LayerNorm]) -> None:
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
VIT_MSN_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`ViTMSNConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
VIT_MSN_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See [`ViTImageProcessor.__call__`]
for details.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
interpolate_pos_encoding (`bool`, *optional*):
Whether to interpolate the pre-trained position encodings.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ViTMSN Model outputting raw hidden-states without any specific head on top.",
VIT_MSN_START_DOCSTRING,
)
class ViTMSNModel(ViTMSNPreTrainedModel):
def __init__(self, config: ViTMSNConfig, use_mask_token: bool = False):
super().__init__(config)
self.config = config
self.embeddings = ViTMSNEmbeddings(config, use_mask_token=use_mask_token)
self.encoder = ViTMSNEncoder(config)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> ViTMSNPatchEmbeddings:
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune: Dict[int, List[int]]) -> None:
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(VIT_MSN_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
interpolate_pos_encoding: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, BaseModelOutput]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`, *optional*):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, ViTMSNModel
>>> import torch
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/vit-msn-small")
>>> model = ViTMSNModel.from_pretrained("facebook/vit-msn-small")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
pixel_values, bool_masked_pos=bool_masked_pos, interpolate_pos_encoding=interpolate_pos_encoding
)
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
if not return_dict:
head_outputs = (sequence_output,)
return head_outputs + encoder_outputs[1:]
return BaseModelOutput(
last_hidden_state=sequence_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
# Caution: We don't have the weights for the classification head yet. This class
# is here for the users that are interested to fine-tune the base model (ViTMSNModel).
@add_start_docstrings(
"""
ViTMSN Model with an image classification head on top e.g. for ImageNet.
""",
VIT_MSN_START_DOCSTRING,
)
class ViTMSNForImageClassification(ViTMSNPreTrainedModel):
def __init__(self, config: ViTMSNConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.vit = ViTMSNModel(config)
# Classifier head
self.classifier = nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(VIT_MSN_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ImageClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
interpolate_pos_encoding: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, ImageClassifierOutput]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, ViTMSNForImageClassification
>>> import torch
>>> from PIL import Image
>>> import requests
>>> torch.manual_seed(2) # doctest: +IGNORE_RESULT
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/vit-msn-small")
>>> model = ViTMSNForImageClassification.from_pretrained("facebook/vit-msn-small")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> # model predicts one of the 1000 ImageNet classes
>>> predicted_label = logits.argmax(-1).item()
>>> print(model.config.id2label[predicted_label])
Kerry blue terrier
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.vit(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
interpolate_pos_encoding=interpolate_pos_encoding,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output[:, 0, :])
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/configuration_lxmert.py | # coding=utf-8
# Copyright 2018, Hao Tan, Mohit Bansal
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" LXMERT model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"unc-nlp/lxmert-base-uncased": "https://huggingface.co/unc-nlp/lxmert-base-uncased/resolve/main/config.json",
}
class LxmertConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`LxmertModel`] or a [`TFLxmertModel`]. It is used
to instantiate a LXMERT model according to the specified arguments, defining the model architecture. Instantiating
a configuration with the defaults will yield a similar configuration to that of the Lxmert
[unc-nlp/lxmert-base-uncased](https://huggingface.co/unc-nlp/lxmert-base-uncased) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the LXMERT model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`LxmertModel`] or [`TFLxmertModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
num_qa_labels (`int`, *optional*, defaults to 9500):
This represents the total number of different question answering (QA) labels there are. If using more than
one dataset with QA, the user will need to account for the total number of labels that all of the datasets
have in total.
num_object_labels (`int`, *optional*, defaults to 1600):
This represents the total number of semantically unique objects that lxmert will be able to classify a
pooled-object feature as belonging too.
num_attr_labels (`int`, *optional*, defaults to 400):
This represents the total number of semantically unique attributes that lxmert will be able to classify a
pooled-object feature as possessing.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the *token_type_ids* passed into [`BertModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
l_layers (`int`, *optional*, defaults to 9):
Number of hidden layers in the Transformer language encoder.
x_layers (`int`, *optional*, defaults to 5):
Number of hidden layers in the Transformer cross modality encoder.
r_layers (`int`, *optional*, defaults to 5):
Number of hidden layers in the Transformer visual encoder.
visual_feat_dim (`int`, *optional*, defaults to 2048):
This represents the last dimension of the pooled-object features used as input for the model, representing
the size of each object feature itself.
visual_pos_dim (`int`, *optional*, defaults to 4):
This represents the number of spacial features that are mixed into the visual features. The default is set
to 4 because most commonly this will represent the location of a bounding box. i.e., (x, y, width, height)
visual_loss_normalizer (`float`, *optional*, defaults to 6.67):
This represents the scaling factor in which each visual loss is multiplied by if during pretraining, one
decided to train with multiple vision-based loss objectives.
task_matched (`bool`, *optional*, defaults to `True`):
This task is used for sentence-image matching. If the sentence correctly describes the image the label will
be 1. If the sentence does not correctly describe the image, the label will be 0.
task_mask_lm (`bool`, *optional*, defaults to `True`):
Whether or not to add masked language modeling (as used in pretraining models such as BERT) to the loss
objective.
task_obj_predict (`bool`, *optional*, defaults to `True`):
Whether or not to add object prediction, attribute prediction and feature regression to the loss objective.
task_qa (`bool`, *optional*, defaults to `True`):
Whether or not to add the question-answering loss to the objective
visual_obj_loss (`bool`, *optional*, defaults to `True`):
Whether or not to calculate the object-prediction loss objective
visual_attr_loss (`bool`, *optional*, defaults to `True`):
Whether or not to calculate the attribute-prediction loss objective
visual_feat_loss (`bool`, *optional*, defaults to `True`):
Whether or not to calculate the feature-regression loss objective
"""
model_type = "lxmert"
attribute_map = {}
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_attention_heads=12,
num_qa_labels=9500,
num_object_labels=1600,
num_attr_labels=400,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
l_layers=9,
x_layers=5,
r_layers=5,
visual_feat_dim=2048,
visual_pos_dim=4,
visual_loss_normalizer=6.67,
task_matched=True,
task_mask_lm=True,
task_obj_predict=True,
task_qa=True,
visual_obj_loss=True,
visual_attr_loss=True,
visual_feat_loss=True,
**kwargs,
):
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_size = type_vocab_size
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.num_qa_labels = num_qa_labels
self.num_object_labels = num_object_labels
self.num_attr_labels = num_attr_labels
self.l_layers = l_layers
self.x_layers = x_layers
self.r_layers = r_layers
self.visual_feat_dim = visual_feat_dim
self.visual_pos_dim = visual_pos_dim
self.visual_loss_normalizer = visual_loss_normalizer
self.task_matched = task_matched
self.task_mask_lm = task_mask_lm
self.task_obj_predict = task_obj_predict
self.task_qa = task_qa
self.visual_obj_loss = visual_obj_loss
self.visual_attr_loss = visual_attr_loss
self.visual_feat_loss = visual_feat_loss
self.num_hidden_layers = {"vision": r_layers, "cross_encoder": x_layers, "language": l_layers}
super().__init__(**kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/modeling_lxmert.py | # coding=utf-8
# Copyright 2018 Hao Tan, Mohit Bansal, and the HuggingFace team
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch LXMERT model."""
import math
import os
import warnings
from dataclasses import dataclass
from typing import Dict, Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import CrossEntropyLoss, SmoothL1Loss
from ...activations import ACT2FN, gelu
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_lxmert import LxmertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "unc-nlp/lxmert-base-uncased"
_CONFIG_FOR_DOC = "LxmertConfig"
LXMERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"unc-nlp/lxmert-base-uncased",
]
class GeLU(nn.Module):
def __init__(self):
super().__init__()
def forward(self, x):
return gelu(x)
@dataclass
class LxmertModelOutput(ModelOutput):
"""
Lxmert's outputs that contain the last hidden states, pooled outputs, and attention probabilities for the language,
visual, and, cross-modality encoders. (note: the visual encoder in Lxmert is referred to as the "relation-ship"
encoder")
Args:
language_output (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the language encoder.
vision_output (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the visual encoder.
pooled_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification, CLS, token) further processed
by a Linear layer and a Tanh activation function. The Linear
language_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
vision_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
language_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
vision_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
language_output: Optional[torch.FloatTensor] = None
vision_output: Optional[torch.FloatTensor] = None
pooled_output: Optional[torch.FloatTensor] = None
language_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
vision_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
language_attentions: Optional[Tuple[torch.FloatTensor]] = None
vision_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class LxmertForQuestionAnsweringOutput(ModelOutput):
"""
Output type of [`LxmertForQuestionAnswering`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.k.
question_answering_score (`torch.FloatTensor` of shape `(batch_size, n_qa_answers)`, *optional*):
Prediction scores of question answering objective (classification).
language_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
vision_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
language_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
vision_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
question_answering_score: Optional[torch.FloatTensor] = None
language_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
vision_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
language_attentions: Optional[Tuple[torch.FloatTensor]] = None
vision_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class LxmertForPreTrainingOutput(ModelOutput):
"""
Output type of [`LxmertForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
cross_relationship_score (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the textual matching objective (classification) head (scores of True/False
continuation before SoftMax).
question_answering_score (`torch.FloatTensor` of shape `(batch_size, n_qa_answers)`):
Prediction scores of question answering objective (classification).
language_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
vision_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for input features + one for the output of each cross-modality layer) of
shape `(batch_size, sequence_length, hidden_size)`.
language_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
vision_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
prediction_logits: Optional[torch.FloatTensor] = None
cross_relationship_score: Optional[torch.FloatTensor] = None
question_answering_score: Optional[torch.FloatTensor] = None
language_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
vision_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
language_attentions: Optional[Tuple[torch.FloatTensor]] = None
vision_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
def load_tf_weights_in_lxmert(model, config, tf_checkpoint_path):
"""Load tf checkpoints in a pytorch model."""
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
names = []
arrays = []
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
names.append(name)
arrays.append(array)
for name, array in zip(names, arrays):
name = name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n
in [
"adam_v",
"adam_m",
"AdamWeightDecayOptimizer",
"AdamWeightDecayOptimizer_1",
"global_step",
]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
else:
try:
pointer = getattr(pointer, scope_names[0])
except AttributeError:
logger.info(f"Skipping {'/'.join(name)}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
if m_name[-11:] == "_embeddings":
pointer = getattr(pointer, "weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
assert pointer.shape == array.shape
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
return model
class LxmertEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=0)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size, padding_idx=0)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size, padding_idx=0)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=1e-12)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, input_ids, token_type_ids=None, inputs_embeds=None):
if input_ids is not None:
input_shape = input_ids.size()
device = input_ids.device
else:
input_shape = inputs_embeds.size()[:-1]
device = inputs_embeds.device
seq_length = input_shape[1]
position_ids = torch.arange(seq_length, dtype=torch.long, device=device)
position_ids = position_ids.unsqueeze(0).expand(input_shape)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + position_embeddings + token_type_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class LxmertAttention(nn.Module):
def __init__(self, config, ctx_dim=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.head_size = self.num_attention_heads * self.attention_head_size
# visual_dim = 2048
if ctx_dim is None:
ctx_dim = config.hidden_size
self.query = nn.Linear(config.hidden_size, self.head_size)
self.key = nn.Linear(ctx_dim, self.head_size)
self.value = nn.Linear(ctx_dim, self.head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (
self.num_attention_heads,
self.attention_head_size,
)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(self, hidden_states, context, attention_mask=None, output_attentions=False):
mixed_query_layer = self.query(hidden_states)
mixed_key_layer = self.key(context)
mixed_value_layer = self.value(context)
query_layer = self.transpose_for_scores(mixed_query_layer)
key_layer = self.transpose_for_scores(mixed_key_layer)
value_layer = self.transpose_for_scores(mixed_value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
if attention_mask is not None:
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class LxmertAttentionOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=1e-12)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class LxmertCrossAttentionLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.att = LxmertAttention(config)
self.output = LxmertAttentionOutput(config)
def forward(self, input_tensor, ctx_tensor, ctx_att_mask=None, output_attentions=False):
output = self.att(input_tensor, ctx_tensor, ctx_att_mask, output_attentions=output_attentions)
if output_attentions:
attention_probs = output[1]
attention_output = self.output(output[0], input_tensor)
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
return outputs
class LxmertSelfAttentionLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.self = LxmertAttention(config)
self.output = LxmertAttentionOutput(config)
def forward(self, input_tensor, attention_mask, output_attentions=False):
# Self attention attends to itself, thus keys and queries are the same (input_tensor).
output = self.self(
input_tensor,
input_tensor,
attention_mask,
output_attentions=output_attentions,
)
if output_attentions:
attention_probs = output[1]
attention_output = self.output(output[0], input_tensor)
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
return outputs
class LxmertIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
self.intermediate_act_fn = ACT2FN[config.hidden_act]
def forward(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class LxmertOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=1e-12)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class LxmertLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = LxmertSelfAttentionLayer(config)
self.intermediate = LxmertIntermediate(config)
self.output = LxmertOutput(config)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
outputs = self.attention(hidden_states, attention_mask, output_attentions=output_attentions)
attention_output = outputs[0]
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
outputs = (layer_output,) + outputs[1:] # add attentions if we output them
return outputs
class LxmertXLayer(nn.Module):
def __init__(self, config):
super().__init__()
# The cross-attention Layer
self.visual_attention = LxmertCrossAttentionLayer(config)
# Self-attention Layers
self.lang_self_att = LxmertSelfAttentionLayer(config)
self.visn_self_att = LxmertSelfAttentionLayer(config)
# Intermediate and Output Layers (FFNs)
self.lang_inter = LxmertIntermediate(config)
self.lang_output = LxmertOutput(config)
self.visn_inter = LxmertIntermediate(config)
self.visn_output = LxmertOutput(config)
def cross_att(
self,
lang_input,
lang_attention_mask,
visual_input,
visual_attention_mask,
output_x_attentions=False,
):
# Cross Attention
lang_att_output = self.visual_attention(
lang_input,
visual_input,
ctx_att_mask=visual_attention_mask,
output_attentions=output_x_attentions,
)
visual_att_output = self.visual_attention(
visual_input,
lang_input,
ctx_att_mask=lang_attention_mask,
output_attentions=False,
)
return lang_att_output, visual_att_output
def self_att(self, lang_input, lang_attention_mask, visual_input, visual_attention_mask):
# Self Attention
lang_att_output = self.lang_self_att(lang_input, lang_attention_mask, output_attentions=False)
visual_att_output = self.visn_self_att(visual_input, visual_attention_mask, output_attentions=False)
return lang_att_output[0], visual_att_output[0]
def output_fc(self, lang_input, visual_input):
# FC layers
lang_inter_output = self.lang_inter(lang_input)
visual_inter_output = self.visn_inter(visual_input)
# Layer output
lang_output = self.lang_output(lang_inter_output, lang_input)
visual_output = self.visn_output(visual_inter_output, visual_input)
return lang_output, visual_output
def forward(
self,
lang_feats,
lang_attention_mask,
visual_feats,
visual_attention_mask,
output_attentions=False,
):
lang_att_output, visual_att_output = self.cross_att(
lang_input=lang_feats,
lang_attention_mask=lang_attention_mask,
visual_input=visual_feats,
visual_attention_mask=visual_attention_mask,
output_x_attentions=output_attentions,
)
attention_probs = lang_att_output[1:]
lang_att_output, visual_att_output = self.self_att(
lang_att_output[0],
lang_attention_mask,
visual_att_output[0],
visual_attention_mask,
)
lang_output, visual_output = self.output_fc(lang_att_output, visual_att_output)
return (
(
lang_output,
visual_output,
attention_probs[0],
)
if output_attentions
else (lang_output, visual_output)
)
class LxmertVisualFeatureEncoder(nn.Module):
def __init__(self, config):
super().__init__()
feat_dim = config.visual_feat_dim
pos_dim = config.visual_pos_dim
# Object feature encoding
self.visn_fc = nn.Linear(feat_dim, config.hidden_size)
self.visn_layer_norm = nn.LayerNorm(config.hidden_size, eps=1e-12)
# Box position encoding
self.box_fc = nn.Linear(pos_dim, config.hidden_size)
self.box_layer_norm = nn.LayerNorm(config.hidden_size, eps=1e-12)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, visual_feats, visual_pos):
x = self.visn_fc(visual_feats)
x = self.visn_layer_norm(x)
y = self.box_fc(visual_pos)
y = self.box_layer_norm(y)
output = (x + y) / 2
output = self.dropout(output)
return output
class LxmertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
# Obj-level image embedding layer
self.visn_fc = LxmertVisualFeatureEncoder(config)
self.config = config
# Number of layers
self.num_l_layers = config.l_layers
self.num_x_layers = config.x_layers
self.num_r_layers = config.r_layers
# Layers
# Using self.layer instead of self.l_layer to support loading BERT weights.
self.layer = nn.ModuleList([LxmertLayer(config) for _ in range(self.num_l_layers)])
self.x_layers = nn.ModuleList([LxmertXLayer(config) for _ in range(self.num_x_layers)])
self.r_layers = nn.ModuleList([LxmertLayer(config) for _ in range(self.num_r_layers)])
def forward(
self,
lang_feats,
lang_attention_mask,
visual_feats,
visual_pos,
visual_attention_mask=None,
output_attentions=None,
):
vision_hidden_states = ()
language_hidden_states = ()
vision_attentions = () if output_attentions or self.config.output_attentions else None
language_attentions = () if output_attentions or self.config.output_attentions else None
cross_encoder_attentions = () if output_attentions or self.config.output_attentions else None
visual_feats = self.visn_fc(visual_feats, visual_pos)
# Run language layers
for layer_module in self.layer:
l_outputs = layer_module(lang_feats, lang_attention_mask, output_attentions=output_attentions)
lang_feats = l_outputs[0]
language_hidden_states = language_hidden_states + (lang_feats,)
if language_attentions is not None:
language_attentions = language_attentions + (l_outputs[1],)
# Run relational layers
for layer_module in self.r_layers:
v_outputs = layer_module(visual_feats, visual_attention_mask, output_attentions=output_attentions)
visual_feats = v_outputs[0]
vision_hidden_states = vision_hidden_states + (visual_feats,)
if vision_attentions is not None:
vision_attentions = vision_attentions + (v_outputs[1],)
# Run cross-modality layers
for layer_module in self.x_layers:
x_outputs = layer_module(
lang_feats,
lang_attention_mask,
visual_feats,
visual_attention_mask,
output_attentions=output_attentions,
)
lang_feats, visual_feats = x_outputs[:2]
vision_hidden_states = vision_hidden_states + (visual_feats,)
language_hidden_states = language_hidden_states + (lang_feats,)
if cross_encoder_attentions is not None:
cross_encoder_attentions = cross_encoder_attentions + (x_outputs[2],)
visual_encoder_outputs = (
vision_hidden_states,
vision_attentions if output_attentions else None,
)
lang_encoder_outputs = (
language_hidden_states,
language_attentions if output_attentions else None,
)
return (
visual_encoder_outputs,
lang_encoder_outputs,
cross_encoder_attentions if output_attentions else None,
)
class LxmertPooler(nn.Module):
def __init__(self, config):
super(LxmertPooler, self).__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class LxmertPredictionHeadTransform(nn.Module):
def __init__(self, config):
super(LxmertPredictionHeadTransform, self).__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.transform_act_fn = ACT2FN[config.hidden_act]
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=1e-12)
def forward(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class LxmertLMPredictionHead(nn.Module):
def __init__(self, config, lxmert_model_embedding_weights):
super(LxmertLMPredictionHead, self).__init__()
self.transform = LxmertPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(
lxmert_model_embedding_weights.size(1),
lxmert_model_embedding_weights.size(0),
bias=False,
)
self.decoder.weight = lxmert_model_embedding_weights
self.bias = nn.Parameter(torch.zeros(lxmert_model_embedding_weights.size(0)))
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states) + self.bias
return hidden_states
class LxmertVisualAnswerHead(nn.Module):
def __init__(self, config, num_labels):
super().__init__()
hid_dim = config.hidden_size
self.logit_fc = nn.Sequential(
nn.Linear(hid_dim, hid_dim * 2),
GeLU(),
nn.LayerNorm(hid_dim * 2, eps=1e-12),
nn.Linear(hid_dim * 2, num_labels),
)
def forward(self, hidden_states):
return self.logit_fc(hidden_states)
class LxmertVisualObjHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = LxmertPredictionHeadTransform(config)
# Decide the use of visual losses
visual_losses = {}
if config.visual_obj_loss:
visual_losses["obj"] = {"shape": (-1,), "num": config.num_object_labels}
if config.visual_attr_loss:
visual_losses["attr"] = {"shape": (-1,), "num": config.num_attr_labels}
if config.visual_feat_loss:
visual_losses["feat"] = {
"shape": (-1, config.visual_feat_dim),
"num": config.visual_feat_dim,
}
self.visual_losses = visual_losses
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder_dict = nn.ModuleDict(
{key: nn.Linear(config.hidden_size, self.visual_losses[key]["num"]) for key in self.visual_losses}
)
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
output = {}
for key in self.visual_losses:
output[key] = self.decoder_dict[key](hidden_states)
return output
class LxmertPreTrainingHeads(nn.Module):
def __init__(self, config, lxmert_model_embedding_weights):
super(LxmertPreTrainingHeads, self).__init__()
self.predictions = LxmertLMPredictionHead(config, lxmert_model_embedding_weights)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output, pooled_output):
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class LxmertPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LxmertConfig
load_tf_weights = load_tf_weights_in_lxmert
base_model_prefix = "lxmert"
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
LXMERT_START_DOCSTRING = r"""
The LXMERT model was proposed in [LXMERT: Learning Cross-Modality Encoder Representations from
Transformers](https://arxiv.org/abs/1908.07490) by Hao Tan and Mohit Bansal. It's a vision and language transformer
model, pretrained on a variety of multi-modal datasets comprising of GQA, VQAv2.0, MSCOCO captions, and Visual
genome, using a combination of masked language modeling, region of interest feature regression, cross entropy loss
for question answering attribute prediction, and object tag prediction.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`LxmertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
LXMERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
visual_feats (`torch.FloatTensor` of shape `(batch_size, num_visual_features, visual_feat_dim)`):
This input represents visual features. They ROI pooled object features from bounding boxes using a
faster-RCNN model)
These are currently not provided by the transformers library.
visual_pos (`torch.FloatTensor` of shape `(batch_size, num_visual_features, visual_pos_dim)`):
This input represents spacial features corresponding to their relative (via index) visual features. The
pre-trained LXMERT model expects these spacial features to be normalized bounding boxes on a scale of 0 to
1.
These are currently not provided by the transformers library.
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
visual_attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Lxmert Model transformer outputting raw hidden-states without any specific head on top.",
LXMERT_START_DOCSTRING,
)
class LxmertModel(LxmertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.embeddings = LxmertEmbeddings(config)
self.encoder = LxmertEncoder(config)
self.pooler = LxmertPooler(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, new_embeddings):
self.embeddings.word_embeddings = new_embeddings
@add_start_docstrings_to_model_forward(LXMERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=LxmertModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
visual_feats: Optional[torch.FloatTensor] = None,
visual_pos: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
visual_attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[LxmertModelOutput, Tuple[torch.FloatTensor]]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if visual_feats is None:
raise ValueError("`visual_feats` cannot be `None`")
if visual_pos is None:
raise ValueError("`visual_pos` cannot be `None`")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and the dtype's smallest value for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = extended_attention_mask.to(dtype=self.dtype)
extended_attention_mask = (1.0 - extended_attention_mask) * torch.finfo(self.dtype).min
# Process the visual attention mask
if visual_attention_mask is not None:
extended_visual_attention_mask = visual_attention_mask.unsqueeze(1).unsqueeze(2)
extended_visual_attention_mask = extended_visual_attention_mask.to(dtype=self.dtype)
extended_visual_attention_mask = (1.0 - extended_visual_attention_mask) * torch.finfo(self.dtype).min
else:
extended_visual_attention_mask = None
# Positional Word Embeddings
embedding_output = self.embeddings(input_ids, token_type_ids, inputs_embeds)
# Run Lxmert encoder
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
visual_feats=visual_feats,
visual_pos=visual_pos,
visual_attention_mask=extended_visual_attention_mask,
output_attentions=output_attentions,
)
visual_encoder_outputs, lang_encoder_outputs = encoder_outputs[:2]
vision_hidden_states = visual_encoder_outputs[0]
language_hidden_states = lang_encoder_outputs[0]
all_attentions = ()
if output_attentions:
language_attentions = lang_encoder_outputs[1]
vision_attentions = visual_encoder_outputs[1]
cross_encoder_attentions = encoder_outputs[2]
all_attentions = (
language_attentions,
vision_attentions,
cross_encoder_attentions,
)
hidden_states = (language_hidden_states, vision_hidden_states) if output_hidden_states else ()
visual_output = vision_hidden_states[-1]
lang_output = language_hidden_states[-1]
pooled_output = self.pooler(lang_output)
if not return_dict:
return (lang_output, visual_output, pooled_output) + hidden_states + all_attentions
return LxmertModelOutput(
pooled_output=pooled_output,
language_output=lang_output,
vision_output=visual_output,
language_hidden_states=language_hidden_states if output_hidden_states else None,
vision_hidden_states=vision_hidden_states if output_hidden_states else None,
language_attentions=language_attentions if output_attentions else None,
vision_attentions=vision_attentions if output_attentions else None,
cross_encoder_attentions=cross_encoder_attentions if output_attentions else None,
)
@add_start_docstrings(
"""Lxmert Model with a specified pretraining head on top.""",
LXMERT_START_DOCSTRING,
)
class LxmertForPreTraining(LxmertPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight"]
def __init__(self, config):
super().__init__(config)
# Configuration
self.config = config
self.num_qa_labels = config.num_qa_labels
self.visual_loss_normalizer = config.visual_loss_normalizer
# Use of pretraining tasks
self.task_mask_lm = config.task_mask_lm
self.task_obj_predict = config.task_obj_predict
self.task_matched = config.task_matched
self.task_qa = config.task_qa
# Lxmert backbone
self.lxmert = LxmertModel(config)
# Pre-training heads
self.cls = LxmertPreTrainingHeads(config, self.lxmert.embeddings.word_embeddings.weight)
if self.task_obj_predict:
self.obj_predict_head = LxmertVisualObjHead(config)
if self.task_qa:
self.answer_head = LxmertVisualAnswerHead(config, self.num_qa_labels)
# Weight initialization
# Initialize weights and apply final processing
self.post_init()
# Loss functions
self.loss_fcts = {
"l2": SmoothL1Loss(reduction="none"),
"visual_ce": CrossEntropyLoss(reduction="none"),
"ce": CrossEntropyLoss(),
}
visual_losses = {}
if config.visual_obj_loss:
visual_losses["obj"] = {
"shape": (-1,),
"num": config.num_object_labels,
"loss": "visual_ce",
}
if config.visual_attr_loss:
visual_losses["attr"] = {
"shape": (-1,),
"num": config.num_attr_labels,
"loss": "visual_ce",
}
if config.visual_feat_loss:
visual_losses["feat"] = {
"shape": (-1, config.visual_feat_dim),
"num": config.visual_feat_dim,
"loss": "l2",
}
self.visual_losses = visual_losses
def resize_num_qa_labels(self, num_labels):
"""
Build a resized question answering linear layer Module from a provided new linear layer. Increasing the size
will add newly initialized weights. Reducing the size will remove weights from the end
Args:
num_labels (`int`, *optional*):
New number of labels in the linear layer weight matrix. Increasing the size will add newly initialized
weights at the end. Reducing the size will remove weights from the end. If not provided or `None`, just
returns a pointer to the qa labels ``torch.nn.Linear``` module of the model without doing anything.
Return:
`torch.nn.Linear`: Pointer to the resized Linear layer or the old Linear layer
"""
cur_qa_logit_layer = self.get_qa_logit_layer()
if num_labels is None or cur_qa_logit_layer is None:
return
new_qa_logit_layer = self._resize_qa_labels(num_labels)
self.config.num_qa_labels = num_labels
self.num_qa_labels = num_labels
return new_qa_logit_layer
def _resize_qa_labels(self, num_labels):
cur_qa_logit_layer = self.get_qa_logit_layer()
new_qa_logit_layer = self._get_resized_qa_labels(cur_qa_logit_layer, num_labels)
self._set_qa_logit_layer(new_qa_logit_layer)
return self.get_qa_logit_layer()
def get_qa_logit_layer(self) -> nn.Module:
"""
Returns the linear layer that produces question answering logits.
Returns:
`nn.Module`: A torch module mapping the question answering prediction hidden states or `None` if LXMERT
does not have a visual answering head.
"""
if hasattr(self, "answer_head"):
return self.answer_head.logit_fc[-1]
def _set_qa_logit_layer(self, qa_logit_layer):
self.answer_head.logit_fc[-1] = qa_logit_layer
def _get_resized_qa_labels(self, cur_qa_logit_layer, num_labels):
if num_labels is None:
return cur_qa_logit_layer
cur_qa_labels, hidden_dim = cur_qa_logit_layer.weight.size()
if cur_qa_labels == num_labels:
return cur_qa_logit_layer
# Build new linear output
if getattr(cur_qa_logit_layer, "bias", None) is not None:
new_qa_logit_layer = nn.Linear(hidden_dim, num_labels)
else:
new_qa_logit_layer = nn.Linear(hidden_dim, num_labels, bias=False)
new_qa_logit_layer.to(cur_qa_logit_layer.weight.device)
# initialize all new labels
self._init_weights(new_qa_logit_layer)
# Copy labels from the previous weights
num_labels_to_copy = min(cur_qa_labels, num_labels)
new_qa_logit_layer.weight.data[:num_labels_to_copy, :] = cur_qa_logit_layer.weight.data[:num_labels_to_copy, :]
if getattr(cur_qa_logit_layer, "bias", None) is not None:
new_qa_logit_layer.bias.data[:num_labels_to_copy] = cur_qa_logit_layer.bias.data[:num_labels_to_copy]
return new_qa_logit_layer
@add_start_docstrings_to_model_forward(LXMERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=LxmertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
visual_feats: Optional[torch.FloatTensor] = None,
visual_pos: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
visual_attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
obj_labels: Optional[Dict[str, Tuple[torch.FloatTensor, torch.FloatTensor]]] = None,
matched_label: Optional[torch.LongTensor] = None,
ans: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[LxmertForPreTrainingOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
obj_labels (`Dict[Str: Tuple[Torch.FloatTensor, Torch.FloatTensor]]`, *optional*):
each key is named after each one of the visual losses and each element of the tuple is of the shape
`(batch_size, num_features)` and `(batch_size, num_features, visual_feature_dim)` for each the label id and
the label score respectively
matched_label (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the whether or not the text input matches the image (classification) loss. Input
should be a sequence pair (see `input_ids` docstring) Indices should be in `[0, 1]`:
- 0 indicates that the sentence does not match the image,
- 1 indicates that the sentence does match the image.
ans (`Torch.Tensor` of shape `(batch_size)`, *optional*):
a one hot representation hof the correct answer *optional*
Returns:
"""
if "masked_lm_labels" in kwargs:
warnings.warn(
"The `masked_lm_labels` argument is deprecated and will be removed in a future version, use `labels`"
" instead.",
FutureWarning,
)
labels = kwargs.pop("masked_lm_labels")
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
device = input_ids.device if input_ids is not None else inputs_embeds.device
lxmert_output = self.lxmert(
input_ids=input_ids,
visual_feats=visual_feats,
visual_pos=visual_pos,
token_type_ids=token_type_ids,
attention_mask=attention_mask,
visual_attention_mask=visual_attention_mask,
inputs_embeds=inputs_embeds,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
return_dict=return_dict,
)
lang_output, visual_output, pooled_output = (
lxmert_output[0],
lxmert_output[1],
lxmert_output[2],
)
lang_prediction_scores, cross_relationship_score = self.cls(lang_output, pooled_output)
if self.task_qa:
answer_score = self.answer_head(pooled_output)
else:
answer_score = pooled_output[0][0]
total_loss = (
None
if (labels is None and matched_label is None and obj_labels is None and ans is None)
else torch.tensor(0.0, device=device)
)
if labels is not None and self.task_mask_lm:
masked_lm_loss = self.loss_fcts["ce"](
lang_prediction_scores.view(-1, self.config.vocab_size),
labels.view(-1),
)
total_loss += masked_lm_loss
if matched_label is not None and self.task_matched:
matched_loss = self.loss_fcts["ce"](cross_relationship_score.view(-1, 2), matched_label.view(-1))
total_loss += matched_loss
if obj_labels is not None and self.task_obj_predict:
total_visual_loss = torch.tensor(0.0, device=input_ids.device)
visual_prediction_scores_dict = self.obj_predict_head(visual_output)
for key, key_info in self.visual_losses.items():
label, mask_conf = obj_labels[key]
output_dim = key_info["num"]
loss_fct_name = key_info["loss"]
label_shape = key_info["shape"]
weight = self.visual_loss_normalizer
visual_loss_fct = self.loss_fcts[loss_fct_name]
visual_prediction_scores = visual_prediction_scores_dict[key]
visual_loss = visual_loss_fct(
visual_prediction_scores.view(-1, output_dim),
label.view(label_shape),
)
if visual_loss.dim() > 1: # Regression Losses
visual_loss = visual_loss.mean(1)
visual_loss = (visual_loss * mask_conf.view(-1)).mean() * weight
total_visual_loss += visual_loss
total_loss += total_visual_loss
if ans is not None and self.task_qa:
answer_loss = self.loss_fcts["ce"](answer_score.view(-1, self.num_qa_labels), ans.view(-1))
total_loss += answer_loss
if not return_dict:
output = (
lang_prediction_scores,
cross_relationship_score,
answer_score,
) + lxmert_output[3:]
return ((total_loss,) + output) if total_loss is not None else output
return LxmertForPreTrainingOutput(
loss=total_loss,
prediction_logits=lang_prediction_scores,
cross_relationship_score=cross_relationship_score,
question_answering_score=answer_score,
language_hidden_states=lxmert_output.language_hidden_states,
vision_hidden_states=lxmert_output.vision_hidden_states,
language_attentions=lxmert_output.language_attentions,
vision_attentions=lxmert_output.vision_attentions,
cross_encoder_attentions=lxmert_output.cross_encoder_attentions,
)
@add_start_docstrings(
"""Lxmert Model with a visual-answering head on top for downstream QA tasks""",
LXMERT_START_DOCSTRING,
)
class LxmertForQuestionAnswering(LxmertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
# Configuration
self.config = config
self.num_qa_labels = config.num_qa_labels
self.visual_loss_normalizer = config.visual_loss_normalizer
# Lxmert backbone
self.lxmert = LxmertModel(config)
self.answer_head = LxmertVisualAnswerHead(config, self.num_qa_labels)
# Weight initialization
# Initialize weights and apply final processing
self.post_init()
# Loss function
self.loss = CrossEntropyLoss()
def resize_num_qa_labels(self, num_labels):
"""
Build a resized question answering linear layer Module from a provided new linear layer. Increasing the size
will add newly initialized weights. Reducing the size will remove weights from the end
Args:
num_labels (`int`, *optional*):
New number of labels in the linear layer weight matrix. Increasing the size will add newly initialized
weights at the end. Reducing the size will remove weights from the end. If not provided or `None`, just
returns a pointer to the qa labels ``torch.nn.Linear``` module of the model without doing anything.
Return:
`torch.nn.Linear`: Pointer to the resized Linear layer or the old Linear layer
"""
cur_qa_logit_layer = self.get_qa_logit_layer()
if num_labels is None or cur_qa_logit_layer is None:
return
new_qa_logit_layer = self._resize_qa_labels(num_labels)
self.config.num_qa_labels = num_labels
self.num_qa_labels = num_labels
return new_qa_logit_layer
def _resize_qa_labels(self, num_labels):
cur_qa_logit_layer = self.get_qa_logit_layer()
new_qa_logit_layer = self._get_resized_qa_labels(cur_qa_logit_layer, num_labels)
self._set_qa_logit_layer(new_qa_logit_layer)
return self.get_qa_logit_layer()
def get_qa_logit_layer(self) -> nn.Module:
"""
Returns the linear layer that produces question answering logits
Returns:
`nn.Module`: A torch module mapping the question answering prediction hidden states. `None`: A NoneType
object if Lxmert does not have the visual answering head.
"""
if hasattr(self, "answer_head"):
return self.answer_head.logit_fc[-1]
def _set_qa_logit_layer(self, qa_logit_layer):
self.answer_head.logit_fc[-1] = qa_logit_layer
def _get_resized_qa_labels(self, cur_qa_logit_layer, num_labels):
if num_labels is None:
return cur_qa_logit_layer
cur_qa_labels, hidden_dim = cur_qa_logit_layer.weight.size()
if cur_qa_labels == num_labels:
return cur_qa_logit_layer
# Build new linear output
if getattr(cur_qa_logit_layer, "bias", None) is not None:
new_qa_logit_layer = nn.Linear(hidden_dim, num_labels)
else:
new_qa_logit_layer = nn.Linear(hidden_dim, num_labels, bias=False)
new_qa_logit_layer.to(cur_qa_logit_layer.weight.device)
# initialize all new labels
self._init_weights(new_qa_logit_layer)
# Copy labels from the previous weights
num_labels_to_copy = min(cur_qa_labels, num_labels)
new_qa_logit_layer.weight.data[:num_labels_to_copy, :] = cur_qa_logit_layer.weight.data[:num_labels_to_copy, :]
if getattr(cur_qa_logit_layer, "bias", None) is not None:
new_qa_logit_layer.bias.data[:num_labels_to_copy] = cur_qa_logit_layer.bias.data[:num_labels_to_copy]
return new_qa_logit_layer
@add_start_docstrings_to_model_forward(LXMERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=LxmertForQuestionAnsweringOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
visual_feats: Optional[torch.FloatTensor] = None,
visual_pos: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
visual_attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[LxmertForQuestionAnsweringOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`Torch.Tensor` of shape `(batch_size)`, *optional*):
A one-hot representation of the correct answer
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
lxmert_output = self.lxmert(
input_ids=input_ids,
visual_feats=visual_feats,
visual_pos=visual_pos,
token_type_ids=token_type_ids,
attention_mask=attention_mask,
visual_attention_mask=visual_attention_mask,
inputs_embeds=inputs_embeds,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
return_dict=return_dict,
)
pooled_output = lxmert_output[2]
answer_score = self.answer_head(pooled_output)
loss = None
if labels is not None:
loss = self.loss(answer_score.view(-1, self.num_qa_labels), labels.view(-1))
if not return_dict:
output = (answer_score,) + lxmert_output[3:]
return (loss,) + output if loss is not None else output
return LxmertForQuestionAnsweringOutput(
loss=loss,
question_answering_score=answer_score,
language_hidden_states=lxmert_output.language_hidden_states,
vision_hidden_states=lxmert_output.vision_hidden_states,
language_attentions=lxmert_output.language_attentions,
vision_attentions=lxmert_output.vision_attentions,
cross_encoder_attentions=lxmert_output.cross_encoder_attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_lxmert": ["LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP", "LxmertConfig"],
"tokenization_lxmert": ["LxmertTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_lxmert_fast"] = ["LxmertTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_lxmert"] = [
"LxmertEncoder",
"LxmertForPreTraining",
"LxmertForQuestionAnswering",
"LxmertModel",
"LxmertPreTrainedModel",
"LxmertVisualFeatureEncoder",
"LxmertXLayer",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_lxmert"] = [
"TF_LXMERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFLxmertForPreTraining",
"TFLxmertMainLayer",
"TFLxmertModel",
"TFLxmertPreTrainedModel",
"TFLxmertVisualFeatureEncoder",
]
if TYPE_CHECKING:
from .configuration_lxmert import LXMERT_PRETRAINED_CONFIG_ARCHIVE_MAP, LxmertConfig
from .tokenization_lxmert import LxmertTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_lxmert_fast import LxmertTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_lxmert import (
LxmertEncoder,
LxmertForPreTraining,
LxmertForQuestionAnswering,
LxmertModel,
LxmertPreTrainedModel,
LxmertVisualFeatureEncoder,
LxmertXLayer,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_lxmert import (
TF_LXMERT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFLxmertForPreTraining,
TFLxmertMainLayer,
TFLxmertModel,
TFLxmertPreTrainedModel,
TFLxmertVisualFeatureEncoder,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/tokenization_lxmert_fast.py | # coding=utf-8
# Copyright 2020 The Google AI Team, Stanford University and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import json
from typing import List, Optional, Tuple
from tokenizers import normalizers
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from .tokenization_lxmert import LxmertTokenizer
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"unc-nlp/lxmert-base-uncased": "https://huggingface.co/unc-nlp/lxmert-base-uncased/resolve/main/vocab.txt",
},
"tokenizer_file": {
"unc-nlp/lxmert-base-uncased": (
"https://huggingface.co/unc-nlp/lxmert-base-uncased/resolve/main/tokenizer.json"
),
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"unc-nlp/lxmert-base-uncased": 512,
}
PRETRAINED_INIT_CONFIGURATION = {
"unc-nlp/lxmert-base-uncased": {"do_lower_case": True},
}
# Copied from transformers.models.bert.tokenization_bert_fast.BertTokenizerFast with bert-base-cased->unc-nlp/lxmert-base-uncased, BERT->Lxmert, Bert->Lxmert
class LxmertTokenizerFast(PreTrainedTokenizerFast):
r"""
Construct a "fast" Lxmert tokenizer (backed by HuggingFace's *tokenizers* library). Based on WordPiece.
This tokenizer inherits from [`PreTrainedTokenizerFast`] which contains most of the main methods. Users should
refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
clean_text (`bool`, *optional*, defaults to `True`):
Whether or not to clean the text before tokenization by removing any control characters and replacing all
whitespaces by the classic one.
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters. This should likely be deactivated for Japanese (see [this
issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original Lxmert).
wordpieces_prefix (`str`, *optional*, defaults to `"##"`):
The prefix for subwords.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
slow_tokenizer_class = LxmertTokenizer
def __init__(
self,
vocab_file=None,
tokenizer_file=None,
do_lower_case=True,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
tokenize_chinese_chars=True,
strip_accents=None,
**kwargs,
):
super().__init__(
vocab_file,
tokenizer_file=tokenizer_file,
do_lower_case=do_lower_case,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
**kwargs,
)
normalizer_state = json.loads(self.backend_tokenizer.normalizer.__getstate__())
if (
normalizer_state.get("lowercase", do_lower_case) != do_lower_case
or normalizer_state.get("strip_accents", strip_accents) != strip_accents
or normalizer_state.get("handle_chinese_chars", tokenize_chinese_chars) != tokenize_chinese_chars
):
normalizer_class = getattr(normalizers, normalizer_state.pop("type"))
normalizer_state["lowercase"] = do_lower_case
normalizer_state["strip_accents"] = strip_accents
normalizer_state["handle_chinese_chars"] = tokenize_chinese_chars
self.backend_tokenizer.normalizer = normalizer_class(**normalizer_state)
self.do_lower_case = do_lower_case
def build_inputs_with_special_tokens(self, token_ids_0, token_ids_1=None):
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A Lxmert sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
output = [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
if token_ids_1 is not None:
output += token_ids_1 + [self.sep_token_id]
return output
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A Lxmert sequence
pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
files = self._tokenizer.model.save(save_directory, name=filename_prefix)
return tuple(files)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/modeling_tf_lxmert.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors, The HuggingFace Inc. team, and the
# Lxmert Authors.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 LXMERT model."""
from __future__ import annotations
import warnings
from dataclasses import dataclass
from typing import Dict, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_utils import (
TFModelInputType,
TFPreTrainedModel,
get_initializer,
keras_serializable,
shape_list,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, stable_softmax
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_lxmert import LxmertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "unc-nlp/lxmert-base-uncased"
_CONFIG_FOR_DOC = "LxmertConfig"
TF_LXMERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"unc-nlp/lxmert-base-uncased",
]
@dataclass
class TFLxmertModelOutput(ModelOutput):
"""
Lxmert's outputs that contain the last hidden states, pooled outputs, and attention probabilities for the language,
visual, and, cross-modality encoders. (note: the visual encoder in Lxmert is referred to as the "relation-ship"
encoder")
Args:
language_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the language encoder.
vision_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the visual encoder.
pooled_output (`tf.Tensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification, CLS, token) further processed
by a Linear layer and a Tanh activation function. The Linear
language_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for input features + one for the output of each cross-modality layer) of shape
`(batch_size, sequence_length, hidden_size)`.
vision_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for input features + one for the output of each cross-modality layer) of shape
`(batch_size, sequence_length, hidden_size)`.
language_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
vision_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_encoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
language_output: tf.Tensor | None = None
vision_output: tf.Tensor | None = None
pooled_output: tf.Tensor | None = None
language_hidden_states: Tuple[tf.Tensor] | None = None
vision_hidden_states: Tuple[tf.Tensor] | None = None
language_attentions: Tuple[tf.Tensor] | None = None
vision_attentions: Tuple[tf.Tensor] | None = None
cross_encoder_attentions: Tuple[tf.Tensor] | None = None
@dataclass
class TFLxmertForPreTrainingOutput(ModelOutput):
"""
Output type of [`LxmertForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `tf.Tensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`tf.Tensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
cross_relationship_score (`tf.Tensor` of shape `(batch_size, 2)`):
Prediction scores of the textual matching objective (classification) head (scores of True/False
continuation before SoftMax).
question_answering_score (`tf.Tensor` of shape `(batch_size, n_qa_answers)`):
Prediction scores of question answering objective (classification).
language_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for input features + one for the output of each cross-modality layer) of shape
`(batch_size, sequence_length, hidden_size)`.
vision_hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for input features + one for the output of each cross-modality layer) of shape
`(batch_size, sequence_length, hidden_size)`.
language_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
vision_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
cross_encoder_attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: tf.Tensor | None = None
prediction_logits: tf.Tensor | None = None
cross_relationship_score: tf.Tensor | None = None
question_answering_score: tf.Tensor | None = None
language_hidden_states: Tuple[tf.Tensor] | None = None
vision_hidden_states: Tuple[tf.Tensor] | None = None
language_attentions: Tuple[tf.Tensor] | None = None
vision_attentions: Tuple[tf.Tensor] | None = None
cross_encoder_attentions: Tuple[tf.Tensor] | None = None
class TFLxmertVisualFeatureEncoder(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
# Object feature encoding
self.visn_fc = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="visn_fc",
)
self.visn_layer_norm = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="visn_layer_norm"
)
# Box position encoding
self.box_fc = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="box_fc",
)
self.box_layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="box_layer_norm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, visn_input, training=False):
feats, boxes = visn_input
x = self.visn_fc(feats)
x = self.visn_layer_norm(x)
y = self.box_fc(boxes)
y = self.box_layer_norm(y)
output = (x + y) / 2
output = self.dropout(output, training=training)
return output
class TFLxmertEmbeddings(tf.keras.layers.Layer):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("token_type_embeddings"):
self.token_type_embeddings = self.add_weight(
name="embeddings",
shape=[self.config.type_vocab_size, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
super().build(input_shape)
def call(self, input_ids=None, token_type_ids=None, inputs_embeds=None, training=False):
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape, value=0)
position_ids = tf.expand_dims(tf.range(start=0, limit=input_shape[-1]), axis=0)
position_embeds = tf.gather(params=self.position_embeddings, indices=position_ids)
token_type_embeds = tf.gather(params=self.token_type_embeddings, indices=token_type_ids)
final_embeddings = inputs_embeds + position_embeds + token_type_embeds
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
class TFLxmertAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads}"
)
self.num_attention_heads = config.num_attention_heads
assert config.hidden_size % config.num_attention_heads == 0
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = tf.keras.layers.Dense(
self.all_head_size,
kernel_initializer=get_initializer(config.initializer_range),
name="query",
)
self.key = tf.keras.layers.Dense(
self.all_head_size,
kernel_initializer=get_initializer(config.initializer_range),
name="key",
)
self.value = tf.keras.layers.Dense(
self.all_head_size,
kernel_initializer=get_initializer(config.initializer_range),
name="value",
)
self.dropout = tf.keras.layers.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x, batch_size):
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
x = tf.reshape(x, (batch_size, -1, self.num_attention_heads, self.attention_head_size))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(self, hidden_states, context, attention_mask, output_attentions, training=False):
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.query(hidden_states)
mixed_key_layer = self.key(context)
mixed_value_layer = self.value(context)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(
query_layer, key_layer, transpose_b=True
) # (batch size, num_heads, seq_len_q, seq_len_k)
dk = tf.cast(shape_list(key_layer)[-1], dtype=attention_scores.dtype) # scale attention_scores
attention_scores = attention_scores / tf.math.sqrt(dk)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TFLxmertModel call() function)
attention_mask = tf.cast(attention_mask, dtype=attention_scores.dtype)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
context_layer = tf.matmul(attention_probs, value_layer)
context_layer = tf.transpose(context_layer, perm=[0, 2, 1, 3])
context_layer = tf.reshape(
context_layer, (batch_size, -1, self.all_head_size)
) # (batch_size, seq_len_q, all_head_size)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class TFLxmertIntermediate(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.intermediate_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class TFLxmertOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class TFLxmertAttentionOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class TFLxmertSelfAttentionLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.self = TFLxmertAttention(config, name="self")
self.attention_output = TFLxmertAttentionOutput(config, name="output")
def call(self, input_tensor, attention_mask, output_attentions, training=False):
# Self attention attends to itself, thus keys and queries are the same (input_tensor).
self_output = self.self(input_tensor, input_tensor, attention_mask, output_attentions)
if output_attentions:
attention_probs = self_output[1]
attention_output = self.attention_output(self_output[0], input_tensor)
return (attention_output, attention_probs) if output_attentions else (attention_output,)
class TFLxmertCrossAttentionLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.att = TFLxmertAttention(config, name="att")
self.attention_output = TFLxmertAttentionOutput(config, name="output")
def call(
self,
input_tensor,
ctx_tensor,
ctx_att_mask,
output_attentions=False,
training=False,
):
output = self.att(input_tensor, ctx_tensor, ctx_att_mask, output_attentions, training=training)
if output_attentions:
attention_probs = output[1]
attention_output = self.attention_output(output[0], input_tensor, training=training)
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
return outputs
class TFLxmertLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.attention = TFLxmertSelfAttentionLayer(config, name="attention")
self.intermediate = TFLxmertIntermediate(config, name="intermediate")
self.transformer_output = TFLxmertOutput(config, name="output")
def call(self, hidden_states, attention_mask, output_attentions, training=False):
attention_outputs = self.attention(hidden_states, attention_mask, output_attentions, training=training)
attention_output = attention_outputs[0]
intermediate_output = self.intermediate(attention_output)
layer_output = self.transformer_output(intermediate_output, attention_output, training=training)
outputs = (layer_output,) + attention_outputs[1:] # add attentions if we output them
return outputs
class TFLxmertXLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.visual_attention = TFLxmertCrossAttentionLayer(config, name="visual_attention")
# Self-attention Layers
self.lang_self_att = TFLxmertSelfAttentionLayer(config, name="lang_self_att")
self.visn_self_att = TFLxmertSelfAttentionLayer(config, name="visn_self_att")
# Intermediate and Output Layers (FFNs)
self.lang_inter = TFLxmertIntermediate(config, name="lang_inter")
self.lang_output = TFLxmertOutput(config, name="lang_output")
self.visn_inter = TFLxmertIntermediate(config, name="visn_inter")
self.visn_output = TFLxmertOutput(config, name="visn_output")
def cross_att(
self,
lang_input,
lang_attention_mask,
visn_input,
visn_attention_mask,
output_attentions,
training=False,
):
# Cross Attention
# Keras saving and loading model *does not work* with the same inputs for two layers.
lang_attention_lang_input = tf.identity(lang_input)
visn_attention_lang_input = tf.identity(lang_input)
lang_attention_visn_input = tf.identity(visn_input)
visn_attention_visn_input = tf.identity(visn_input)
lang_att_output = self.visual_attention(
lang_attention_lang_input,
lang_attention_visn_input,
visn_attention_mask,
output_attentions=output_attentions,
training=training,
)
visn_att_output = self.visual_attention(
visn_attention_visn_input,
visn_attention_lang_input,
lang_attention_mask,
output_attentions=output_attentions,
training=training,
)
return lang_att_output, visn_att_output
def self_att(
self,
lang_input,
lang_attention_mask,
visn_input,
visn_attention_mask,
training=False,
):
# Self Attention
output_attentions = False
lang_att_output = self.lang_self_att(lang_input, lang_attention_mask, output_attentions, training=training)
visn_att_output = self.visn_self_att(visn_input, visn_attention_mask, output_attentions, training=training)
return lang_att_output[0], visn_att_output[0]
def output_fc(self, lang_input, visn_input, training=False):
# FC layers
lang_inter_output = self.lang_inter(lang_input)
visn_inter_output = self.visn_inter(visn_input)
# Layer output
lang_output = self.lang_output(lang_inter_output, lang_input, training)
visn_output = self.visn_output(visn_inter_output, visn_input, training)
return lang_output, visn_output
def call(
self,
lang_feats,
lang_attention_mask,
visn_feats,
visn_attention_mask,
output_attentions,
training=False,
):
lang_att_output = lang_feats
visn_att_output = visn_feats
lang_att_output, visn_att_output = self.cross_att(
lang_att_output,
lang_attention_mask,
visn_att_output,
visn_attention_mask,
output_attentions,
training=training,
)
attention_probs = lang_att_output[1:]
lang_att_output, visn_att_output = self.self_att(
lang_att_output[0],
lang_attention_mask,
visn_att_output[0],
visn_attention_mask,
training=training,
)
lang_output, visn_output = self.output_fc(lang_att_output, visn_att_output, training=training)
return (lang_output, visn_output, attention_probs[0]) if output_attentions else (lang_output, visn_output)
class TFLxmertEncoder(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.visn_fc = TFLxmertVisualFeatureEncoder(config, name="visn_fc")
# Number of layers
self.num_l_layers = config.l_layers
self.num_x_layers = config.x_layers
self.num_r_layers = config.r_layers
# Layers
# Using self.layer instead of self.l_layer to support loading BERT weights.
self.layer = [TFLxmertLayer(config, name=f"layer_._{i}") for i in range(self.num_l_layers)]
self.x_layers = [TFLxmertXLayer(config, name=f"x_layers_._{i}") for i in range(self.num_x_layers)]
self.r_layers = [TFLxmertLayer(config, name=f"r_layers_._{i}") for i in range(self.num_r_layers)]
self.config = config
def call(
self,
lang_feats=None,
lang_attention_mask=None,
visual_feats=None,
visual_pos=None,
visual_attention_mask=None,
output_attentions=None,
training=False,
):
vision_hidden_states = ()
language_hidden_states = ()
vision_attentions = () if output_attentions or self.config.output_attentions else None
language_attentions = () if output_attentions or self.config.output_attentions else None
cross_encoder_attentions = () if output_attentions or self.config.output_attentions else None
visual_feats = self.visn_fc([visual_feats, visual_pos], training=training)
# Run language layers
for layer_module in self.layer:
l_outputs = layer_module(lang_feats, lang_attention_mask, output_attentions, training=training)
lang_feats = l_outputs[0]
language_hidden_states = language_hidden_states + (lang_feats,)
if language_attentions is not None:
language_attentions = language_attentions + (l_outputs[1],)
# Run relational layers
for layer_module in self.r_layers:
v_outputs = layer_module(
visual_feats,
visual_attention_mask,
output_attentions,
training=training,
)
visual_feats = v_outputs[0]
vision_hidden_states = vision_hidden_states + (visual_feats,)
if vision_attentions is not None:
vision_attentions = vision_attentions + (v_outputs[1],)
# Run cross-modality layers
for layer_module in self.x_layers:
x_outputs = layer_module(
lang_feats,
lang_attention_mask,
visual_feats,
visual_attention_mask,
output_attentions,
training=training,
)
lang_feats, visual_feats = x_outputs[:2]
vision_hidden_states = vision_hidden_states + (visual_feats,)
language_hidden_states = language_hidden_states + (lang_feats,)
if cross_encoder_attentions is not None:
cross_encoder_attentions = cross_encoder_attentions + (x_outputs[2],)
visual_encoder_outputs = (
vision_hidden_states,
vision_attentions if output_attentions else None,
)
lang_encoder_outputs = (
language_hidden_states,
language_attentions if output_attentions else None,
)
return (
visual_encoder_outputs,
lang_encoder_outputs,
cross_encoder_attentions if output_attentions else None,
)
@keras_serializable
class TFLxmertMainLayer(tf.keras.layers.Layer):
config_class = LxmertConfig
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.num_l_layers = config.l_layers
self.num_x_layers = config.x_layers
self.num_r_layers = config.r_layers
self.initializer_range = config.initializer_range
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.return_dict = config.use_return_dict
self.embeddings = TFLxmertEmbeddings(config, name="embeddings")
self.encoder = TFLxmertEncoder(config, name="encoder")
self.pooler = TFLxmertPooler(config, name="pooler")
self.config = config
def get_input_embeddings(self):
return self.embeddings
def set_input_embeddings(self, value):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids=None,
visual_feats=None,
visual_pos=None,
attention_mask=None,
visual_attention_mask=None,
token_type_ids=None,
inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if visual_pos is None or visual_feats is None:
raise ValueError("visual_feats and visual_pos cannot be `None` in LXMERT's `call` method.")
if attention_mask is None:
attention_mask = tf.fill(input_shape, 1)
if token_type_ids is None:
token_type_ids = tf.fill(input_shape, 0)
# Positional Word Embeddings
embedding_output = self.embeddings(input_ids, token_type_ids, inputs_embeds, training)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
if visual_attention_mask is not None:
extended_visual_attention_mask = tf.reshape(visual_attention_mask, (input_shape[0], 1, 1, input_shape[1]))
extended_visual_attention_mask = tf.expand_dims(tf.expand_dims(visual_attention_mask, axis=1), axis=1)
extended_visual_attention_mask = tf.cast(extended_visual_attention_mask, dtype=embedding_output.dtype)
extended_visual_attention_mask = tf.multiply(
tf.subtract(one_cst, extended_visual_attention_mask), ten_thousand_cst
)
else:
extended_visual_attention_mask = None
# Run Lxmert encoder
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
visual_feats,
visual_pos,
extended_visual_attention_mask,
output_attentions,
training,
)
visual_encoder_outputs, lang_encoder_outputs = encoder_outputs[:2]
vision_hidden_states = visual_encoder_outputs[0]
language_hidden_states = lang_encoder_outputs[0]
all_attentions = ()
if output_attentions:
language_attentions = lang_encoder_outputs[1]
vision_attentions = visual_encoder_outputs[1]
cross_encoder_attentions = encoder_outputs[2]
all_attentions = (
language_attentions,
vision_attentions,
cross_encoder_attentions,
)
hidden_states = (language_hidden_states, vision_hidden_states) if output_hidden_states else ()
visual_output = vision_hidden_states[-1]
lang_output = language_hidden_states[-1]
pooled_output = self.pooler(lang_output)
if not return_dict:
return (lang_output, visual_output, pooled_output) + hidden_states + all_attentions
return TFLxmertModelOutput(
pooled_output=pooled_output,
language_output=lang_output,
vision_output=visual_output,
language_hidden_states=language_hidden_states if output_hidden_states else None,
vision_hidden_states=vision_hidden_states if output_hidden_states else None,
language_attentions=language_attentions if output_attentions else None,
vision_attentions=vision_attentions if output_attentions else None,
cross_encoder_attentions=cross_encoder_attentions if output_attentions else None,
)
class TFLxmertPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LxmertConfig
base_model_prefix = "lxmert"
@property
def dummy_inputs(self):
"""
Dummy inputs to build the network.
Returns:
tf.Tensor with dummy inputs
"""
batch_size = 2
num_visual_features = 10
input_ids = tf.constant([[3, 5, 6], [2, 3, 4]], dtype=tf.int32)
visual_feats = tf.random.uniform((batch_size, num_visual_features, self.config.visual_feat_dim))
visual_pos = tf.random.uniform((batch_size, num_visual_features, 4))
return {
"input_ids": input_ids,
"visual_feats": visual_feats,
"visual_pos": visual_pos,
}
@property
def input_signature(self):
return {
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
"visual_feats": tf.TensorSpec((None, None, self.config.visual_feat_dim), tf.float32, name="visual_feats"),
"visual_pos": tf.TensorSpec((None, None, 4), tf.float32, name="visual_pos"),
"visual_attention_mask": tf.TensorSpec((None, None), tf.int32, name="visual_attention_mask"),
"token_type_ids": tf.TensorSpec((None, None), tf.int32, name="token_type_ids"),
}
LXMERT_START_DOCSTRING = r"""
The LXMERT model was proposed in [LXMERT: Learning Cross-Modality Encoder Representations from
Transformers](https://arxiv.org/abs/1908.07490) by Hao Tan and Mohit Bansal. It's a vision and language transformer
model, pre-trained on a variety of multi-modal datasets comprising of GQA, VQAv2.0, MCSCOCO captions, and Visual
genome, using a combination of masked language modeling, region of interest feature regression, cross entropy loss
for question answering attribute prediction, and object tag prediction.
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`LxmertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
LXMERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray` or `tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
visual_feats (`tf.Tensor` of shape `(batch_size, num_visual_features, visual_feat_dim)`):
This input represents visual features. They ROI pooled object features from bounding boxes using a
faster-RCNN model)
These are currently not provided by the transformers library.
visual_pos (`tf.Tensor` of shape `(batch_size, num_visual_features, visual_feat_dim)`):
This input represents spacial features corresponding to their relative (via index) visual features. The
pre-trained LXMERT model expects these spacial features to be normalized bounding boxes on a scale of 0 to
1.
These are currently not provided by the transformers library.
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
visual_attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
MMask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
inputs_embeds (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare Lxmert Model transformer outputting raw hidden-states without any specific head on top.",
LXMERT_START_DOCSTRING,
)
class TFLxmertModel(TFLxmertPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.lxmert = TFLxmertMainLayer(config, name="lxmert")
@unpack_inputs
@add_start_docstrings_to_model_forward(LXMERT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFLxmertModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
visual_feats: tf.Tensor | None = None,
visual_pos: tf.Tensor | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
visual_attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[Tuple, TFLxmertModelOutput]:
outputs = self.lxmert(
input_ids,
visual_feats,
visual_pos,
attention_mask,
visual_attention_mask,
token_type_ids,
inputs_embeds,
output_attentions,
output_hidden_states,
return_dict,
training,
)
return outputs
class TFLxmertPooler(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
return pooled_output
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPredictionHeadTransform with Bert->Lxmert
class TFLxmertPredictionHeadTransform(tf.keras.layers.Layer):
def __init__(self, config: LxmertConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
if isinstance(config.hidden_act, str):
self.transform_act_fn = get_tf_activation(config.hidden_act)
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(inputs=hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertLMPredictionHead with Bert->Lxmert
class TFLxmertLMPredictionHead(tf.keras.layers.Layer):
def __init__(self, config: LxmertConfig, input_embeddings: tf.keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.config = config
self.hidden_size = config.hidden_size
self.transform = TFLxmertPredictionHeadTransform(config, name="transform")
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.input_embeddings = input_embeddings
def build(self, input_shape: tf.TensorShape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
super().build(input_shape)
def get_output_embeddings(self) -> tf.keras.layers.Layer:
return self.input_embeddings
def set_output_embeddings(self, value: tf.Variable):
self.input_embeddings.weight = value
self.input_embeddings.vocab_size = shape_list(value)[0]
def get_bias(self) -> Dict[str, tf.Variable]:
return {"bias": self.bias}
def set_bias(self, value: tf.Variable):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.transform(hidden_states=hidden_states)
seq_length = shape_list(hidden_states)[1]
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, self.hidden_size])
hidden_states = tf.matmul(a=hidden_states, b=self.input_embeddings.weight, transpose_b=True)
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, seq_length, self.config.vocab_size])
hidden_states = tf.nn.bias_add(value=hidden_states, bias=self.bias)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertMLMHead with Bert->Lxmert
class TFLxmertMLMHead(tf.keras.layers.Layer):
def __init__(self, config: LxmertConfig, input_embeddings: tf.keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.predictions = TFLxmertLMPredictionHead(config, input_embeddings, name="predictions")
def call(self, sequence_output: tf.Tensor) -> tf.Tensor:
prediction_scores = self.predictions(hidden_states=sequence_output)
return prediction_scores
class TFLxmertPreTrainingHeads(tf.keras.layers.Layer):
def __init__(self, config, input_embeddings, **kwargs):
super().__init__(**kwargs)
self.predictions = TFLxmertLMPredictionHead(config, input_embeddings, name="predictions")
self.seq_relationship = tf.keras.layers.Dense(
2,
kernel_initializer=get_initializer(config.initializer_range),
name="seq_relationship",
)
def call(self, sequence_output, pooled_output):
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class TFLxmertVisualAnswerHead(tf.keras.layers.Layer):
def __init__(self, config, num_labels, **kwargs):
super().__init__(**kwargs)
hid_dim = config.hidden_size
self.dense = tf.keras.layers.Dense(
hid_dim * 2,
kernel_initializer=get_initializer(config.initializer_range),
name="logit_fc_._0",
)
self.activation = get_tf_activation("gelu")
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="logit_fc_._2")
self.dense_1 = tf.keras.layers.Dense(
num_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="logit_fc_._3",
)
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.dense_1(hidden_states)
return hidden_states
class TFLxmertVisualObjHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.transform = TFLxmertPredictionHeadTransform(config, name="transform")
# Decide the use of visual losses
visual_losses = {}
if config.visual_obj_loss:
visual_losses["obj"] = {"shape": (-1,), "num": config.num_object_labels}
if config.visual_attr_loss:
visual_losses["attr"] = {"shape": (-1,), "num": config.num_attr_labels}
if config.visual_feat_loss:
visual_losses["feat"] = {"shape": (-1, 2048), "num": config.visual_feat_dim}
self.visual_losses = visual_losses
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder_dict = {
key: tf.keras.layers.Dense(
self.visual_losses[key]["num"],
kernel_initializer=get_initializer(config.initializer_range),
name=f"decoder_dict.{key}",
)
for key in self.visual_losses
}
def call(self, hidden_states):
hidden_states = self.transform(hidden_states)
output = {}
for key in self.visual_losses:
output[key] = self.decoder_dict[key](hidden_states)
return output
@add_start_docstrings("""Lxmert Model with a `language modeling` head on top.""", LXMERT_START_DOCSTRING)
class TFLxmertForPreTraining(TFLxmertPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.config = config
self.num_qa_labels = config.num_qa_labels
self.visual_loss_normalizer = config.visual_loss_normalizer
# Use of pretraining tasks
self.task_mask_lm = config.task_mask_lm
self.task_obj_predict = config.task_obj_predict
self.task_matched = config.task_matched
self.task_qa = config.task_qa
# Lxmert backbone
self.lxmert = TFLxmertMainLayer(config, name="lxmert")
# Pre-training heads
self.cls = TFLxmertPreTrainingHeads(config, self.lxmert.embeddings, name="cls")
if self.task_obj_predict:
self.obj_predict_head = TFLxmertVisualObjHead(config, name="obj_predict_head")
if self.task_qa:
self.answer_head = TFLxmertVisualAnswerHead(config, self.num_qa_labels, name="answer_head")
# Loss functions
self.loss_fcts = {
"l2": tf.keras.losses.Huber(delta=1.0, name="huber_loss"),
"visn_ce": tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
"ce": tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
}
visual_losses = {}
if config.visual_obj_loss:
visual_losses["obj"] = {
"shape": (-1,),
"num": config.num_object_labels,
"loss": "visn_ce",
}
if config.visual_attr_loss:
visual_losses["attr"] = {
"shape": (-1,),
"num": config.num_attr_labels,
"loss": "visn_ce",
}
if config.visual_feat_loss:
visual_losses["feat"] = {
"shape": (-1, config.visual_feat_dim),
"num": config.visual_feat_dim,
"loss": "l2",
}
self.visual_losses = visual_losses
@property
def dummy_inputs(self):
"""
Dummy inputs to build the network.
Returns:
tf.Tensor with dummy inputs
"""
batch_size = 2
num_visual_features = 10
input_ids = tf.constant([[3, 5, 6], [2, 3, 4]], dtype=tf.int32)
visual_feats = tf.random.uniform((batch_size, num_visual_features, self.config.visual_feat_dim))
visual_pos = tf.random.uniform((batch_size, num_visual_features, 4))
if self.config.task_obj_predict:
obj_labels = {}
if self.config.visual_attr_loss and self.config.task_obj_predict:
obj_labels["attr"] = (
tf.ones([batch_size, num_visual_features]),
tf.ones([batch_size, num_visual_features]),
)
if self.config.visual_feat_loss and self.config.task_obj_predict:
obj_labels["feat"] = (
tf.ones([batch_size, num_visual_features, self.config.visual_feat_dim]),
tf.ones([batch_size, num_visual_features]),
)
if self.config.visual_obj_loss and self.config.task_obj_predict:
obj_labels["obj"] = (
tf.ones([batch_size, num_visual_features]),
tf.ones([batch_size, num_visual_features]),
)
return {
**{
"input_ids": input_ids,
"visual_feats": visual_feats,
"visual_pos": visual_pos,
},
**({"obj_labels": obj_labels} if self.config.task_obj_predict else {}),
}
def get_lm_head(self):
return self.cls.predictions
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.cls.name + "/" + self.cls.predictions.name
@unpack_inputs
@add_start_docstrings_to_model_forward(LXMERT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFLxmertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
visual_feats: tf.Tensor | None = None,
visual_pos: tf.Tensor | None = None,
attention_mask: tf.Tensor | None = None,
visual_attention_mask: tf.Tensor | None = None,
token_type_ids: tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
masked_lm_labels: tf.Tensor | None = None,
obj_labels: Dict[str, Tuple[tf.Tensor, tf.Tensor]] | None = None,
matched_label: tf.Tensor | None = None,
ans: tf.Tensor | None = None,
output_attentions: bool | None = None,
output_hidden_states: bool | None = None,
return_dict: bool | None = None,
training: bool = False,
) -> Tuple[tf.Tensor] | TFLxmertForPreTrainingOutput:
r"""
masked_lm_labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
obj_labels (`Dict[Str: Tuple[tf.Tensor, tf.Tensor]]`, *optional*, defaults to `None`):
each key is named after each one of the visual losses and each element of the tuple is of the shape
`(batch_size, num_features)` and `(batch_size, num_features, visual_feature_dim)` for each the label id and
the label score respectively
matched_label (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the whether or not the text input matches the image (classification) loss. Input
should be a sequence pair (see `input_ids` docstring) Indices should be in `[0, 1]`:
- 0 indicates that the sentence does not match the image,
- 1 indicates that the sentence does match the image.
ans (`tf.Tensor` of shape `(batch_size)`, *optional*, defaults to `None`):
a one hot representation hof the correct answer *optional*
Returns:
"""
lxmert_output = self.lxmert(
input_ids,
visual_feats,
visual_pos,
attention_mask,
visual_attention_mask,
token_type_ids,
inputs_embeds,
output_attentions,
output_hidden_states,
return_dict,
training,
)
lang_output, visual_output, pooled_output = (
lxmert_output[0],
lxmert_output[1],
lxmert_output[2],
)
lang_prediction_scores, cross_relationship_score = self.cls(lang_output, pooled_output)
if self.task_qa:
answer_score = self.answer_head(pooled_output)
else:
answer_score = pooled_output[0][0]
total_loss = (
None
if (masked_lm_labels is None and matched_label is None and obj_labels is None and ans is None)
else tf.constant(0.0)
)
losses = ()
if masked_lm_labels is not None and self.task_mask_lm:
masked_lm_loss = self.loss_fcts["ce"](
tf.reshape(masked_lm_labels, [-1]),
tf.reshape(lang_prediction_scores, [-1, self.config.vocab_size]),
)
total_loss += masked_lm_loss
losses += (masked_lm_loss,)
if matched_label is not None and self.task_matched:
matched_loss = self.loss_fcts["ce"](
tf.reshape(matched_label, [-1]),
tf.reshape(cross_relationship_score, [-1, 2]),
)
total_loss += matched_loss
losses += (matched_loss,)
if obj_labels is not None and self.task_obj_predict:
total_visn_loss = 0.0
visn_prediction_scores_dict = self.obj_predict_head(visual_output)
for key, key_info in self.visual_losses.items():
label, mask_conf = obj_labels[key]
output_dim = key_info["num"]
loss_fct_name = key_info["loss"]
label_shape = key_info["shape"]
weight = self.visual_loss_normalizer
visn_loss_fct = self.loss_fcts[loss_fct_name]
visn_prediction_scores = visn_prediction_scores_dict[key]
visn_loss = visn_loss_fct(
tf.reshape(label, label_shape),
tf.reshape(visn_prediction_scores, [-1, output_dim]),
)
if visn_loss.ndim > 1: # Regression Losses
visn_loss = tf.reduce_mean(visn_loss)
visn_loss = tf.reduce_mean(visn_loss * tf.cast(tf.reshape(mask_conf, [-1]), visn_loss.dtype)) * weight
total_visn_loss += visn_loss
losses += (visn_loss,)
total_loss += total_visn_loss
if ans is not None and self.task_qa:
answer_loss = self.loss_fcts["ce"](
tf.reshape(ans, [-1]), tf.reshape(answer_score, [-1, self.num_qa_labels])
)
# exclude "*2" here to match the effect of QA losses.
# Previous: (loss *0) for 6 epochs, (loss *2) for 6 epochs. (Used 10 instead of 6 in EMNLP paper)
# Now : (loss *1) for 12 epochs
#
# * 2 # Multiply by 2 because > half of the data will not have label
total_loss += answer_loss
losses += (answer_loss,)
# return total_loss, tf.stack(losses)[tf.new_axis, ...], answer_score.detach()
if not return_dict:
output = (
lang_prediction_scores,
cross_relationship_score,
answer_score,
) + lxmert_output[3:]
return ((total_loss,) + output) if total_loss is not None else output
return TFLxmertForPreTrainingOutput(
loss=total_loss,
prediction_logits=lang_prediction_scores,
cross_relationship_score=cross_relationship_score,
question_answering_score=answer_score,
language_hidden_states=lxmert_output.language_hidden_states,
vision_hidden_states=lxmert_output.vision_hidden_states,
language_attentions=lxmert_output.language_attentions,
vision_attentions=lxmert_output.vision_attentions,
cross_encoder_attentions=lxmert_output.cross_encoder_attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/tokenization_lxmert.py | # coding=utf-8
# Copyright 2020 The Google AI Team, Stanford University and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import collections
import os
import unicodedata
from typing import List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"unc-nlp/lxmert-base-uncased": "https://huggingface.co/unc-nlp/lxmert-base-uncased/resolve/main/vocab.txt",
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"unc-nlp/lxmert-base-uncased": 512,
}
PRETRAINED_INIT_CONFIGURATION = {
"unc-nlp/lxmert-base-uncased": {"do_lower_case": True},
}
# Copied from transformers.models.bert.tokenization_bert.load_vocab
def load_vocab(vocab_file):
"""Loads a vocabulary file into a dictionary."""
vocab = collections.OrderedDict()
with open(vocab_file, "r", encoding="utf-8") as reader:
tokens = reader.readlines()
for index, token in enumerate(tokens):
token = token.rstrip("\n")
vocab[token] = index
return vocab
# Copied from transformers.models.bert.tokenization_bert.whitespace_tokenize
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
# Copied from transformers.models.bert.tokenization_bert.BertTokenizer with bert-base-cased->unc-nlp/lxmert-base-uncased, BERT->Lxmert, BertTokenizer->LxmertTokenizer
class LxmertTokenizer(PreTrainedTokenizer):
r"""
Construct a Lxmert tokenizer. Based on WordPiece.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
do_basic_tokenize (`bool`, *optional*, defaults to `True`):
Whether or not to do basic tokenization before WordPiece.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original Lxmert).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
do_lower_case=True,
do_basic_tokenize=True,
never_split=None,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
tokenize_chinese_chars=True,
strip_accents=None,
**kwargs,
):
if not os.path.isfile(vocab_file):
raise ValueError(
f"Can't find a vocabulary file at path '{vocab_file}'. To load the vocabulary from a Google pretrained"
" model use `tokenizer = LxmertTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.vocab = load_vocab(vocab_file)
self.ids_to_tokens = collections.OrderedDict([(ids, tok) for tok, ids in self.vocab.items()])
self.do_basic_tokenize = do_basic_tokenize
if do_basic_tokenize:
self.basic_tokenizer = BasicTokenizer(
do_lower_case=do_lower_case,
never_split=never_split,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
)
self.wordpiece_tokenizer = WordpieceTokenizer(vocab=self.vocab, unk_token=str(unk_token))
super().__init__(
do_lower_case=do_lower_case,
do_basic_tokenize=do_basic_tokenize,
never_split=never_split,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
**kwargs,
)
@property
def do_lower_case(self):
return self.basic_tokenizer.do_lower_case
@property
def vocab_size(self):
return len(self.vocab)
def get_vocab(self):
return dict(self.vocab, **self.added_tokens_encoder)
def _tokenize(self, text, split_special_tokens=False):
split_tokens = []
if self.do_basic_tokenize:
for token in self.basic_tokenizer.tokenize(
text, never_split=self.all_special_tokens if not split_special_tokens else None
):
# If the token is part of the never_split set
if token in self.basic_tokenizer.never_split:
split_tokens.append(token)
else:
split_tokens += self.wordpiece_tokenizer.tokenize(token)
else:
split_tokens = self.wordpiece_tokenizer.tokenize(text)
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.vocab.get(token, self.vocab.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.ids_to_tokens.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace(" ##", "").strip()
return out_string
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A Lxmert sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A Lxmert sequence
pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
index = 0
if os.path.isdir(save_directory):
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
with open(vocab_file, "w", encoding="utf-8") as writer:
for token, token_index in sorted(self.vocab.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
do_split_on_punc (`bool`, *optional*, defaults to `True`):
In some instances we want to skip the basic punctuation splitting so that later tokenization can capture
the full context of the words, such as contractions.
"""
def __init__(
self,
do_lower_case=True,
never_split=None,
tokenize_chinese_chars=True,
strip_accents=None,
do_split_on_punc=True,
):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
self.do_split_on_punc = do_split_on_punc
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. For sub-word tokenization, see WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
# prevents treating the same character with different unicode codepoints as different characters
unicode_normalized_text = unicodedata.normalize("NFC", text)
orig_tokens = whitespace_tokenize(unicode_normalized_text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if not self.do_split_on_punc or (never_split is not None and text in never_split):
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
# Copied from transformers.models.bert.tokenization_bert.WordpieceTokenizer
class WordpieceTokenizer(object):
"""Runs WordPiece tokenization."""
def __init__(self, vocab, unk_token, max_input_chars_per_word=100):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, text):
"""
Tokenizes a piece of text into its word pieces. This uses a greedy longest-match-first algorithm to perform
tokenization using the given vocabulary.
For example, `input = "unaffable"` wil return as output `["un", "##aff", "##able"]`.
Args:
text: A single token or whitespace separated tokens. This should have
already been passed through *BasicTokenizer*.
Returns:
A list of wordpiece tokens.
"""
output_tokens = []
for token in whitespace_tokenize(text):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
output_tokens.append(self.unk_token)
continue
is_bad = False
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if start > 0:
substr = "##" + substr
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
is_bad = True
break
sub_tokens.append(cur_substr)
start = end
if is_bad:
output_tokens.append(self.unk_token)
else:
output_tokens.extend(sub_tokens)
return output_tokens
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/lxmert/convert_lxmert_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert LXMERT checkpoint."""
import argparse
import torch
from transformers import LxmertConfig, LxmertForPreTraining, load_tf_weights_in_lxmert
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_checkpoint_path, config_file, pytorch_dump_path):
# Initialise PyTorch model
config = LxmertConfig.from_json_file(config_file)
print(f"Building PyTorch model from configuration: {config}")
model = LxmertForPreTraining(config)
# Load weights from tf checkpoint
load_tf_weights_in_lxmert(model, config, tf_checkpoint_path)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
torch.save(model.state_dict(), pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--config_file",
default=None,
type=str,
required=True,
help="The config json file corresponding to the pre-trained model. \nThis specifies the model architecture.",
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(args.tf_checkpoint_path, args.config_file, args.pytorch_dump_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/configuration_clip.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" CLIP model configuration"""
import os
from collections import OrderedDict
from typing import TYPE_CHECKING, Any, Mapping, Optional, Union
if TYPE_CHECKING:
from ...processing_utils import ProcessorMixin
from ...utils import TensorType
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
CLIP_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"openai/clip-vit-base-patch32": "https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/config.json",
# See all CLIP models at https://huggingface.co/models?filter=clip
}
class CLIPTextConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`CLIPTextModel`]. It is used to instantiate a CLIP
text encoder according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the text encoder of the CLIP
[openai/clip-vit-base-patch32](https://huggingface.co/openai/clip-vit-base-patch32) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 49408):
Vocabulary size of the CLIP text model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`CLIPModel`].
hidden_size (`int`, *optional*, defaults to 512):
Dimensionality of the encoder layers and the pooler layer.
intermediate_size (`int`, *optional*, defaults to 2048):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
projection_dim (`int`, *optional*, defaults to 512):
Dimentionality of text and vision projection layers.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 8):
Number of attention heads for each attention layer in the Transformer encoder.
max_position_embeddings (`int`, *optional*, defaults to 77):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
hidden_act (`str` or `function`, *optional*, defaults to `"quick_gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` `"quick_gelu"` are supported.
layer_norm_eps (`float`, *optional*, defaults to 1e-05):
The epsilon used by the layer normalization layers.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
initializer_factor (`float`, *optional*, defaults to 1.0):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
pad_token_id (`int`, *optional*, defaults to 1):
Padding token id.
bos_token_id (`int`, *optional*, defaults to 49406):
Beginning of stream token id.
eos_token_id (`int`, *optional*, defaults to 49407):
End of stream token id.
Example:
```python
>>> from transformers import CLIPTextConfig, CLIPTextModel
>>> # Initializing a CLIPTextConfig with openai/clip-vit-base-patch32 style configuration
>>> configuration = CLIPTextConfig()
>>> # Initializing a CLIPTextModel (with random weights) from the openai/clip-vit-base-patch32 style configuration
>>> model = CLIPTextModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "clip_text_model"
def __init__(
self,
vocab_size=49408,
hidden_size=512,
intermediate_size=2048,
projection_dim=512,
num_hidden_layers=12,
num_attention_heads=8,
max_position_embeddings=77,
hidden_act="quick_gelu",
layer_norm_eps=1e-5,
attention_dropout=0.0,
initializer_range=0.02,
initializer_factor=1.0,
# This differs from `CLIPTokenizer`'s default and from openai/clip
# See https://github.com/huggingface/transformers/pull/24773#issuecomment-1632287538
pad_token_id=1,
bos_token_id=49406,
eos_token_id=49407,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.projection_dim = projection_dim
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.max_position_embeddings = max_position_embeddings
self.layer_norm_eps = layer_norm_eps
self.hidden_act = hidden_act
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.attention_dropout = attention_dropout
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
cls._set_token_in_kwargs(kwargs)
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
# get the text config dict if we are loading from CLIPConfig
if config_dict.get("model_type") == "clip":
config_dict = config_dict["text_config"]
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
class CLIPVisionConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`CLIPVisionModel`]. It is used to instantiate a
CLIP vision encoder according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the vision encoder of the CLIP
[openai/clip-vit-base-patch32](https://huggingface.co/openai/clip-vit-base-patch32) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
projection_dim (`int`, *optional*, defaults to 512):
Dimentionality of text and vision projection layers.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 32):
The size (resolution) of each patch.
hidden_act (`str` or `function`, *optional*, defaults to `"quick_gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` ``"quick_gelu"` are supported.
layer_norm_eps (`float`, *optional*, defaults to 1e-05):
The epsilon used by the layer normalization layers.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
initializer_factor (`float`, *optional*, defaults to 1.0):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
Example:
```python
>>> from transformers import CLIPVisionConfig, CLIPVisionModel
>>> # Initializing a CLIPVisionConfig with openai/clip-vit-base-patch32 style configuration
>>> configuration = CLIPVisionConfig()
>>> # Initializing a CLIPVisionModel (with random weights) from the openai/clip-vit-base-patch32 style configuration
>>> model = CLIPVisionModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "clip_vision_model"
def __init__(
self,
hidden_size=768,
intermediate_size=3072,
projection_dim=512,
num_hidden_layers=12,
num_attention_heads=12,
num_channels=3,
image_size=224,
patch_size=32,
hidden_act="quick_gelu",
layer_norm_eps=1e-5,
attention_dropout=0.0,
initializer_range=0.02,
initializer_factor=1.0,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.projection_dim = projection_dim
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.num_channels = num_channels
self.patch_size = patch_size
self.image_size = image_size
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.attention_dropout = attention_dropout
self.layer_norm_eps = layer_norm_eps
self.hidden_act = hidden_act
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
cls._set_token_in_kwargs(kwargs)
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
# get the vision config dict if we are loading from CLIPConfig
if config_dict.get("model_type") == "clip":
config_dict = config_dict["vision_config"]
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
class CLIPConfig(PretrainedConfig):
r"""
[`CLIPConfig`] is the configuration class to store the configuration of a [`CLIPModel`]. It is used to instantiate
a CLIP model according to the specified arguments, defining the text model and vision model configs. Instantiating
a configuration with the defaults will yield a similar configuration to that of the CLIP
[openai/clip-vit-base-patch32](https://huggingface.co/openai/clip-vit-base-patch32) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
text_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`CLIPTextConfig`].
vision_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`CLIPVisionConfig`].
projection_dim (`int`, *optional*, defaults to 512):
Dimentionality of text and vision projection layers.
logit_scale_init_value (`float`, *optional*, defaults to 2.6592):
The inital value of the *logit_scale* paramter. Default is used as per the original CLIP implementation.
kwargs (*optional*):
Dictionary of keyword arguments.
Example:
```python
>>> from transformers import CLIPConfig, CLIPModel
>>> # Initializing a CLIPConfig with openai/clip-vit-base-patch32 style configuration
>>> configuration = CLIPConfig()
>>> # Initializing a CLIPModel (with random weights) from the openai/clip-vit-base-patch32 style configuration
>>> model = CLIPModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
>>> # We can also initialize a CLIPConfig from a CLIPTextConfig and a CLIPVisionConfig
>>> from transformers import CLIPTextConfig, CLIPVisionConfig
>>> # Initializing a CLIPText and CLIPVision configuration
>>> config_text = CLIPTextConfig()
>>> config_vision = CLIPVisionConfig()
>>> config = CLIPConfig.from_text_vision_configs(config_text, config_vision)
```"""
model_type = "clip"
def __init__(
self, text_config=None, vision_config=None, projection_dim=512, logit_scale_init_value=2.6592, **kwargs
):
# If `_config_dict` exist, we use them for the backward compatibility.
# We pop out these 2 attributes before calling `super().__init__` to avoid them being saved (which causes a lot
# of confusion!).
text_config_dict = kwargs.pop("text_config_dict", None)
vision_config_dict = kwargs.pop("vision_config_dict", None)
super().__init__(**kwargs)
# Instead of simply assigning `[text|vision]_config_dict` to `[text|vision]_config`, we use the values in
# `[text|vision]_config_dict` to update the values in `[text|vision]_config`. The values should be same in most
# cases, but we don't want to break anything regarding `_config_dict` that existed before commit `8827e1b2`.
if text_config_dict is not None:
if text_config is None:
text_config = {}
# This is the complete result when using `text_config_dict`.
_text_config_dict = CLIPTextConfig(**text_config_dict).to_dict()
# Give a warning if the values exist in both `_text_config_dict` and `text_config` but being different.
for key, value in _text_config_dict.items():
if key in text_config and value != text_config[key] and key not in ["transformers_version"]:
# If specified in `text_config_dict`
if key in text_config_dict:
message = (
f"`{key}` is found in both `text_config_dict` and `text_config` but with different values. "
f'The value `text_config_dict["{key}"]` will be used instead.'
)
# If inferred from default argument values (just to be super careful)
else:
message = (
f"`text_config_dict` is provided which will be used to initialize `CLIPTextConfig`. The "
f'value `text_config["{key}"]` will be overriden.'
)
logger.warning(message)
# Update all values in `text_config` with the ones in `_text_config_dict`.
text_config.update(_text_config_dict)
if vision_config_dict is not None:
if vision_config is None:
vision_config = {}
# This is the complete result when using `vision_config_dict`.
_vision_config_dict = CLIPVisionConfig(**vision_config_dict).to_dict()
# convert keys to string instead of integer
if "id2label" in _vision_config_dict:
_vision_config_dict["id2label"] = {
str(key): value for key, value in _vision_config_dict["id2label"].items()
}
# Give a warning if the values exist in both `_vision_config_dict` and `vision_config` but being different.
for key, value in _vision_config_dict.items():
if key in vision_config and value != vision_config[key] and key not in ["transformers_version"]:
# If specified in `vision_config_dict`
if key in vision_config_dict:
message = (
f"`{key}` is found in both `vision_config_dict` and `vision_config` but with different "
f'values. The value `vision_config_dict["{key}"]` will be used instead.'
)
# If inferred from default argument values (just to be super careful)
else:
message = (
f"`vision_config_dict` is provided which will be used to initialize `CLIPVisionConfig`. "
f'The value `vision_config["{key}"]` will be overriden.'
)
logger.warning(message)
# Update all values in `vision_config` with the ones in `_vision_config_dict`.
vision_config.update(_vision_config_dict)
if text_config is None:
text_config = {}
logger.info("`text_config` is `None`. Initializing the `CLIPTextConfig` with default values.")
if vision_config is None:
vision_config = {}
logger.info("`vision_config` is `None`. initializing the `CLIPVisionConfig` with default values.")
self.text_config = CLIPTextConfig(**text_config)
self.vision_config = CLIPVisionConfig(**vision_config)
self.projection_dim = projection_dim
self.logit_scale_init_value = logit_scale_init_value
self.initializer_factor = 1.0
@classmethod
def from_text_vision_configs(cls, text_config: CLIPTextConfig, vision_config: CLIPVisionConfig, **kwargs):
r"""
Instantiate a [`CLIPConfig`] (or a derived class) from clip text model configuration and clip vision model
configuration.
Returns:
[`CLIPConfig`]: An instance of a configuration object
"""
return cls(text_config=text_config.to_dict(), vision_config=vision_config.to_dict(), **kwargs)
class CLIPOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("input_ids", {0: "batch", 1: "sequence"}),
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
("attention_mask", {0: "batch", 1: "sequence"}),
]
)
@property
def outputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("logits_per_image", {0: "batch"}),
("logits_per_text", {0: "batch"}),
("text_embeds", {0: "batch"}),
("image_embeds", {0: "batch"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
def generate_dummy_inputs(
self,
processor: "ProcessorMixin",
batch_size: int = -1,
seq_length: int = -1,
framework: Optional["TensorType"] = None,
) -> Mapping[str, Any]:
text_input_dict = super().generate_dummy_inputs(
processor.tokenizer, batch_size=batch_size, seq_length=seq_length, framework=framework
)
image_input_dict = super().generate_dummy_inputs(
processor.image_processor, batch_size=batch_size, framework=framework
)
return {**text_input_dict, **image_input_dict}
@property
def default_onnx_opset(self) -> int:
return 14
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/modeling_tf_clip.py | # coding=utf-8
# Copyright 2021 The OpenAI Team Authors and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 CLIP model."""
from __future__ import annotations
import math
from dataclasses import dataclass
from typing import Any, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import TFBaseModelOutput, TFBaseModelOutputWithPooling
# Public API
from ...modeling_tf_utils import (
TFModelInputType,
TFPreTrainedModel,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_clip import CLIPConfig, CLIPTextConfig, CLIPVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "openai/clip-vit-base-patch32"
TF_CLIP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"openai/clip-vit-base-patch32",
# See all CLIP models at https://huggingface.co/models?filter=clip
]
LARGE_NEGATIVE = -1e8
# Copied from transformers.models.bart.modeling_tf_bart._expand_mask
def _expand_mask(mask: tf.Tensor, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
src_len = shape_list(mask)[1]
tgt_len = tgt_len if tgt_len is not None else src_len
one_cst = tf.constant(1.0)
mask = tf.cast(mask, dtype=one_cst.dtype)
expanded_mask = tf.tile(mask[:, None, None, :], (1, 1, tgt_len, 1))
return (one_cst - expanded_mask) * LARGE_NEGATIVE
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/pytorch/pytorch%20lightning/loss%20function/gpu/2021/03/07/CLIP.html
def contrastive_loss(logits: tf.Tensor) -> tf.Tensor:
return tf.math.reduce_mean(
tf.keras.metrics.sparse_categorical_crossentropy(
y_true=tf.range(shape_list(logits)[0]), y_pred=logits, from_logits=True
)
)
def clip_loss(similarity: tf.Tensor) -> tf.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(tf.transpose(similarity))
return (caption_loss + image_loss) / 2.0
@dataclass
class TFCLIPOutput(ModelOutput):
"""
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image:(`tf.Tensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text:(`tf.Tensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
text_embeds(`tf.Tensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of [`TFCLIPTextModel`].
image_embeds(`tf.Tensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`TFCLIPVisionModel`].
text_model_output([`~modeling_tf_utils.TFBaseModelOutputWithPooling`]):
The output of the [`TFCLIPTextModel`].
vision_model_output([`~modeling_tf_utils.TFBaseModelOutputWithPooling`]):
The output of the [`TFCLIPVisionModel`].
"""
loss: tf.Tensor | None = None
logits_per_image: tf.Tensor = None
logits_per_text: tf.Tensor = None
text_embeds: tf.Tensor = None
image_embeds: tf.Tensor = None
text_model_output: TFBaseModelOutputWithPooling = None
vision_model_output: TFBaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
class TFCLIPVisionEmbeddings(tf.keras.layers.Layer):
def __init__(self, config: CLIPVisionConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.image_size = config.image_size
self.patch_size = config.patch_size
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.config = config
self.patch_embedding = tf.keras.layers.Conv2D(
filters=self.embed_dim,
kernel_size=self.patch_size,
strides=self.patch_size,
padding="valid",
data_format="channels_last",
use_bias=False,
kernel_initializer=get_initializer(self.config.initializer_range * self.config.initializer_factor),
name="patch_embedding",
)
def build(self, input_shape: tf.TensorShape = None):
factor = self.config.initializer_factor
self.class_embedding = self.add_weight(
shape=(self.embed_dim,),
initializer=get_initializer(self.embed_dim**-0.5 * factor),
trainable=True,
name="class_embedding",
)
with tf.name_scope("position_embedding"):
self.position_embedding = self.add_weight(
shape=(self.num_positions, self.embed_dim),
initializer=get_initializer(self.config.initializer_range * factor),
trainable=True,
name="embeddings",
)
super().build(input_shape)
def call(self, pixel_values: tf.Tensor) -> tf.Tensor:
"""`pixel_values` is expected to be of NCHW format."""
batch_size, num_channels, height, width = shape_list(pixel_values)
# When running on CPU, `tf.nn.conv2d` doesn't support `NCHW` format.
# So change the input format from `NCHW` to `NHWC`.
# shape = (batch_size, in_height, in_width, in_channels=num_channels)
pixel_values = tf.transpose(pixel_values, perm=(0, 2, 3, 1))
patch_embeds = self.patch_embedding(pixel_values)
# Change the 2D spatial dimensions to a single temporal dimension.
# shape = (batch_size, num_patches, out_channels=embed_dim)
patch_embeds = tf.reshape(tensor=patch_embeds, shape=(batch_size, self.num_patches, -1))
# add the [CLS] token to the embedded patch tokens
class_embeds = tf.broadcast_to(self.class_embedding, shape=(batch_size, 1, self.embed_dim))
embeddings = tf.concat((class_embeds, patch_embeds), axis=1)
embeddings = embeddings + self.position_embedding
return embeddings
class TFCLIPTextEmbeddings(tf.keras.layers.Layer):
def __init__(self, config: CLIPTextConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.config = config
def build(self, input_shape: tf.TensorShape = None):
with tf.name_scope("token_embedding"):
self.weight = self.add_weight(
shape=(self.config.vocab_size, self.embed_dim),
initializer=get_initializer(self.config.initializer_factor * self.config.initializer_range),
trainable=True,
name="weight",
)
with tf.name_scope("position_embedding"):
self.position_embedding = self.add_weight(
shape=(self.config.max_position_embeddings, self.embed_dim),
initializer=get_initializer(self.config.initializer_factor * self.config.initializer_range),
trainable=True,
name="embeddings",
)
super().build(input_shape)
def call(
self,
input_ids: tf.Tensor = None,
position_ids: tf.Tensor = None,
inputs_embeds: tf.Tensor = None,
) -> tf.Tensor:
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
if input_ids is None and inputs_embeds is None:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if position_ids is None:
position_ids = tf.expand_dims(tf.range(start=0, limit=input_shape[-1]), axis=0)
position_embeds = tf.gather(params=self.position_embedding, indices=position_ids)
position_embeds = tf.tile(input=position_embeds, multiples=(input_shape[0], 1, 1))
final_embeddings = inputs_embeds + position_embeds
return final_embeddings
class TFCLIPAttention(tf.keras.layers.Layer):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config: CLIPConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = self.embed_dim // self.num_attention_heads
if self.attention_head_size * self.num_attention_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_attention_heads})."
)
factor = config.initializer_factor
in_proj_std = (self.embed_dim**-0.5) * ((2 * config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (self.embed_dim**-0.5) * factor
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.q_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="q_proj"
)
self.k_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="k_proj"
)
self.v_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="v_proj"
)
self.dropout = tf.keras.layers.Dropout(rate=config.attention_dropout)
self.out_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(out_proj_std), name="out_proj"
)
# copied from transformers.models.bert.modeling_tf_bert.TFBertSelfAttention.transpose_for_scores
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
causal_attention_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
"""Input shape: Batch x Time x Channel"""
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.q_proj(inputs=hidden_states)
mixed_key_layer = self.k_proj(inputs=hidden_states)
mixed_value_layer = self.v_proj(inputs=hidden_states)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
dk = tf.cast(self.sqrt_att_head_size, dtype=attention_scores.dtype)
attention_scores = tf.divide(attention_scores, dk)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
# Apply the causal attention mask (precomputed for all layers in TFCLIPModel call() function)
attention_scores = tf.add(attention_scores, causal_attention_mask)
if attention_mask is not None:
# Apply the attention mask (precomputed for all layers in TFCLIPModel call() function)
attention_scores = tf.add(attention_scores, attention_mask)
# Normalize the attention scores to probabilities.
_attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=_attention_probs, training=training)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, embed_dim)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.embed_dim))
attention_output = self.out_proj(attention_output, training=training)
# In TFBert, attention weights are returned after dropout.
# However, in CLIP, they are returned before dropout.
outputs = (attention_output, _attention_probs) if output_attentions else (attention_output,)
return outputs
class TFCLIPMLP(tf.keras.layers.Layer):
def __init__(self, config: CLIPConfig, **kwargs):
super().__init__(**kwargs)
self.activation_fn = get_tf_activation(config.hidden_act)
factor = config.initializer_factor
in_proj_std = (config.hidden_size**-0.5) * ((2 * config.num_hidden_layers) ** -0.5) * factor
fc_std = (2 * config.hidden_size) ** -0.5 * factor
self.fc1 = tf.keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(fc_std), name="fc1"
)
self.fc2 = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(in_proj_std), name="fc2"
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.fc1(inputs=hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(inputs=hidden_states)
return hidden_states
class TFCLIPEncoderLayer(tf.keras.layers.Layer):
def __init__(self, config: CLIPConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.self_attn = TFCLIPAttention(config, name="self_attn")
self.layer_norm1 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm1")
self.mlp = TFCLIPMLP(config, name="mlp")
self.layer_norm2 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm2")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
causal_attention_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`tf.Tensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
causal_attention_mask (`tf.Tensor`): causal attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
output_attentions (`bool`):
Whether or not to return the attentions tensors of all attention layers. See `outputs` under returned
tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(inputs=hidden_states)
attention_outputs = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
training=training,
)
hidden_states = attention_outputs[0]
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(inputs=hidden_states)
hidden_states = self.mlp(hidden_states=hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,) + attention_outputs[1:] # add attentions if we output them
return outputs
class TFCLIPEncoder(tf.keras.layers.Layer):
"""
Transformer encoder consisting of `config.num_hidden_layers` self attention layers. Each layer is a
[`TFCLIPEncoderLayer`].
Args:
config: CLIPConfig
"""
def __init__(self, config: CLIPConfig, **kwargs):
super().__init__(**kwargs)
self.layers = [TFCLIPEncoderLayer(config, name=f"layers_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
causal_attention_mask: tf.Tensor,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layers):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class TFCLIPTextTransformer(tf.keras.layers.Layer):
def __init__(self, config: CLIPTextConfig, **kwargs):
super().__init__(**kwargs)
self.embeddings = TFCLIPTextEmbeddings(config, name="embeddings")
self.encoder = TFCLIPEncoder(config, name="encoder")
self.final_layer_norm = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="final_layer_norm"
)
# For `pooled_output` computation
self.eos_token_id = config.eos_token_id
def call(
self,
input_ids: TFModelInputType,
attention_mask: tf.Tensor,
position_ids: tf.Tensor,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
input_shape = shape_list(input_ids)
embedding_output = self.embeddings(input_ids=input_ids, position_ids=position_ids)
batch_size, seq_length = input_shape
# CLIP's text model uses causal mask, prepare it here.
# https://github.com/openai/CLIP/blob/cfcffb90e69f37bf2ff1e988237a0fbe41f33c04/clip/model.py#L324
causal_attention_mask = self._build_causal_attention_mask(batch_size, seq_length, dtype=embedding_output.dtype)
# check attention mask and invert
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask)
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
sequence_output = self.final_layer_norm(inputs=sequence_output)
if self.eos_token_id == 2:
# The `eos_token_id` was incorrect before PR #24773: Let's keep what have been done here.
# A CLIP model with such `eos_token_id` in the config can't work correctly with extra new tokens added
# ------------------------------------------------------------
# text_embeds.shape = [batch_size, n_ctx, transformer.width]
# take features from the eot embedding (eot_token is the highest number in each sequence)
pooled_output = tf.gather_nd(
params=sequence_output,
indices=tf.stack(
values=(tf.range(input_shape[0], dtype=tf.int64), tf.math.argmax(input_ids, axis=-1)), axis=1
),
)
else:
# The config gets updated `eos_token_id` from PR #24773 (so the use of exta new tokens is possible)
pooled_output = tf.gather_nd(
params=sequence_output,
indices=tf.stack(
values=(
tf.range(input_shape[0], dtype=tf.int64),
tf.math.argmax(tf.cast(input_ids == self.eos_token_id, dtype=tf.int8), axis=-1),
),
axis=1,
),
)
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def _build_causal_attention_mask(self, batch_size, seq_length, dtype=tf.float32):
# It is possible with an unspecified sequence length for seq_length to be
# a runtime value, which is unsupported by tf.constant. Per the TensorFlow
# docs, tf.fill can handle runtime dynamic shapes:
# https://www.tensorflow.org/api_docs/python/tf/fill
diag = tf.cast(tf.fill((seq_length,), 0.0), dtype)
# set an additive 2D attention mask with all places being masked
to_mask = tf.cast(tf.fill((seq_length, seq_length), -10000.0), dtype)
# set diagonal & lower triangular parts to 0 (i.e. the places not to be masked)
# TIP: think the 2D matrix as the space of (query_seq, key_seq)
to_mask = tf.linalg.band_part(to_mask, 0, -1)
# to_mask = tf.linalg.band_part(to_mask, -1, 0)
to_mask = tf.linalg.set_diag(to_mask, diagonal=diag)
return tf.broadcast_to(input=to_mask, shape=(batch_size, 1, seq_length, seq_length))
@keras_serializable
class TFCLIPTextMainLayer(tf.keras.layers.Layer):
config_class = CLIPTextConfig
def __init__(self, config: CLIPTextConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.text_model = TFCLIPTextTransformer(config, name="text_model")
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.text_model.embeddings
def set_input_embeddings(self, value: tf.Variable):
self.text_model.embeddings.weight = value
self.text_model.embeddings.vocab_size = shape_list(value)[0]
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if input_ids is None:
raise ValueError("You have to specify input_ids")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
text_model_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return text_model_outputs
class TFCLIPVisionTransformer(tf.keras.layers.Layer):
def __init__(self, config: CLIPVisionConfig, **kwargs):
super().__init__(**kwargs)
self.embeddings = TFCLIPVisionEmbeddings(config, name="embeddings")
self.pre_layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="pre_layrnorm")
self.encoder = TFCLIPEncoder(config, name="encoder")
self.post_layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="post_layernorm")
def call(
self,
pixel_values: TFModelInputType,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
embedding_output = self.embeddings(pixel_values=pixel_values)
embedding_output = self.pre_layernorm(inputs=embedding_output)
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=None,
causal_attention_mask=None,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = sequence_output[:, 0, :]
pooled_output = self.post_layernorm(inputs=pooled_output)
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@keras_serializable
class TFCLIPVisionMainLayer(tf.keras.layers.Layer):
config_class = CLIPVisionConfig
def __init__(self, config: CLIPVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.vision_model = TFCLIPVisionTransformer(config, name="vision_model")
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.vision_model.embeddings
@unpack_inputs
def call(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
vision_model_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return vision_model_outputs
@keras_serializable
class TFCLIPMainLayer(tf.keras.layers.Layer):
config_class = CLIPConfig
def __init__(self, config: CLIPConfig, **kwargs):
super().__init__(**kwargs)
if not isinstance(config.text_config, CLIPTextConfig):
raise ValueError(
"config.text_config is expected to be of type CLIPTextConfig but is of type"
f" {type(config.text_config)}."
)
if not isinstance(config.vision_config, CLIPVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type CLIPVisionConfig but is of type"
f" {type(config.vision_config)}."
)
self.config = config
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.text_model = TFCLIPTextTransformer(text_config, name="text_model")
self.vision_model = TFCLIPVisionTransformer(vision_config, name="vision_model")
self.visual_projection = tf.keras.layers.Dense(
units=self.projection_dim,
kernel_initializer=get_initializer(vision_config.hidden_size**-0.5 * self.config.initializer_factor),
use_bias=False,
name="visual_projection",
)
self.text_projection = tf.keras.layers.Dense(
units=self.projection_dim,
kernel_initializer=get_initializer(text_config.hidden_size**-0.5 * self.config.initializer_factor),
use_bias=False,
name="text_projection",
)
def build(self, input_shape: tf.TensorShape = None):
self.logit_scale = self.add_weight(
shape=(1,),
initializer=tf.keras.initializers.Constant(self.config.logit_scale_init_value),
trainable=True,
name="logit_scale",
)
super().build(input_shape)
@unpack_inputs
def get_text_features(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
if input_ids is None:
raise ValueError("You have to specify either input_ids")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = text_outputs[1]
text_features = self.text_projection(inputs=pooled_output)
return text_features
@unpack_inputs
def get_image_features(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = vision_outputs[1] # pooled_output
image_features = self.visual_projection(inputs=pooled_output)
return image_features
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
pixel_values: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFCLIPOutput, Tuple[tf.Tensor]]:
if input_ids is None:
raise ValueError("You have to specify either input_ids")
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(inputs=image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(inputs=text_embeds)
# normalized features
image_embeds = image_embeds / tf.norm(tensor=image_embeds, ord="euclidean", axis=-1, keepdims=True)
text_embeds = text_embeds / tf.norm(tensor=text_embeds, ord="euclidean", axis=-1, keepdims=True)
# cosine similarity as logits
logit_scale = tf.math.exp(self.logit_scale)
logits_per_text = tf.matmul(text_embeds, image_embeds, transpose_b=True) * logit_scale
logits_per_image = tf.transpose(logits_per_text)
loss = None
if return_loss:
loss = clip_loss(logits_per_text)
loss = tf.reshape(loss, (1,))
if not return_dict:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return (loss,) + output if loss is not None else output
return TFCLIPOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
class TFCLIPPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CLIPConfig
base_model_prefix = "clip"
_keys_to_ignore_on_load_missing = [r"position_ids"]
_keys_to_ignore_on_load_unexpected = [r"position_ids"]
CLIP_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Args:
config ([`CLIPConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
CLIP_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
CLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`CLIPImageProcessor.__call__`] for details. output_attentions (`bool`, *optional*): Whether or not to
return the attentions tensors of all attention layers. See `attentions` under returned tensors for more
detail. This argument can be used only in eager mode, in graph mode the value in the config will be used
instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
CLIP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
pixel_values (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` `Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`CLIPImageProcessor.__call__`] for details.
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
class TFCLIPTextModel(TFCLIPPreTrainedModel):
config_class = CLIPTextConfig
def __init__(self, config: CLIPTextConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.clip = TFCLIPTextMainLayer(config, name="clip")
@unpack_inputs
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=CLIPTextConfig)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TFCLIPTextModel
>>> model = TFCLIPTextModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled (EOS token) states
```"""
outputs = self.clip(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
class TFCLIPVisionModel(TFCLIPPreTrainedModel):
config_class = CLIPVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: CLIPVisionConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.clip = TFCLIPVisionMainLayer(config, name="clip")
@unpack_inputs
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=CLIPVisionConfig)
def call(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFCLIPVisionModel
>>> model = TFCLIPVisionModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
outputs = self.clip(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(CLIP_START_DOCSTRING)
class TFCLIPModel(TFCLIPPreTrainedModel):
config_class = CLIPConfig
def __init__(self, config: CLIPConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.clip = TFCLIPMainLayer(config, name="clip")
@unpack_inputs
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def get_text_features(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
r"""
Returns:
text_features (`tf.Tensor` of shape `(batch_size, output_dim`): The text embeddings obtained by applying
the projection layer to the pooled output of [`TFCLIPTextModel`].
Examples:
```python
>>> from transformers import AutoTokenizer, TFCLIPModel
>>> model = TFCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="tf")
>>> text_features = model.get_text_features(**inputs)
```"""
text_features = self.clip.get_text_features(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return text_features
@unpack_inputs
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
r"""
Returns:
image_features (`tf.Tensor` of shape `(batch_size, output_dim`): The image embeddings obtained by applying
the projection layer to the pooled output of [`TFCLIPVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFCLIPModel
>>> model = TFCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="tf")
>>> image_features = model.get_image_features(**inputs)
```"""
image_features = self.clip.get_image_features(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return image_features
@unpack_inputs
@add_start_docstrings_to_model_forward(CLIP_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFCLIPOutput, config_class=CLIPConfig)
def call(
self,
input_ids: TFModelInputType | None = None,
pixel_values: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFCLIPOutput, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> import tensorflow as tf
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFCLIPModel
>>> model = TFCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="tf", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = tf.nn.softmax(logits_per_image, axis=1) # we can take the softmax to get the label probabilities
```"""
outputs = self.clip(
input_ids=input_ids,
pixel_values=pixel_values,
attention_mask=attention_mask,
position_ids=position_ids,
return_loss=return_loss,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return outputs
def serving_output(self, output: TFCLIPOutput) -> TFCLIPOutput:
# TODO: As is this currently fails with saved_model=True, because
# TensorFlow cannot trace through nested dataclasses. Reference:
# https://github.com/huggingface/transformers/pull/16886
return output
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/modeling_flax_clip.py | # coding=utf-8
# Copyright 2021 The OpenAI Team Authors, The Google Flax Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Any, Optional, Tuple, Union
import flax
import flax.linen as nn
import jax
import jax.numpy as jnp
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax import lax
from ...modeling_flax_outputs import FlaxBaseModelOutput, FlaxBaseModelOutputWithPooling
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import ModelOutput, add_start_docstrings, logging
from .configuration_clip import CLIPConfig, CLIPTextConfig, CLIPVisionConfig
logger = logging.get_logger(__name__)
CLIP_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading, saving and converting weights from PyTorch models)
This model is also a
[flax.linen.Module](https://flax.readthedocs.io/en/latest/api_reference/flax.linen/module.html) subclass. Use it as
a regular Flax linen Module and refer to the Flax documentation for all matter related to general usage and
behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`CLIPConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
CLIP_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
CLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`numpy.ndarray` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
CLIP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
pixel_values (`numpy.ndarray` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@flax.struct.dataclass
class FlaxCLIPTextModelOutput(ModelOutput):
"""
Base class for text model's outputs that also contains a pooling of the last hidden states.
Args:
text_embeds (`jnp.ndarray` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of
[`FlaxCLIPTextModel`].
last_hidden_state (`jnp.ndarray` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
text_embeds: jnp.ndarray = None
last_hidden_state: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxCLIPOutput(ModelOutput):
"""
Args:
logits_per_image:(`jnp.ndarray` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text:(`jnp.ndarray` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
text_embeds(`jnp.ndarray` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of
[`FlaxCLIPTextModel`].
image_embeds(`jnp.ndarray` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`FlaxCLIPVisionModel`].
text_model_output(`FlaxBaseModelOutputWithPooling`):
The output of the [`FlaxCLIPTextModel`].
vision_model_output(`FlaxBaseModelOutputWithPooling`):
The output of the [`FlaxCLIPVisionModel`].
"""
logits_per_image: jnp.ndarray = None
logits_per_text: jnp.ndarray = None
text_embeds: jnp.ndarray = None
image_embeds: jnp.ndarray = None
text_model_output: FlaxBaseModelOutputWithPooling = None
vision_model_output: FlaxBaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
class FlaxCLIPVisionEmbeddings(nn.Module):
config: CLIPVisionConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
embed_dim = self.config.hidden_size
image_size = self.config.image_size
patch_size = self.config.patch_size
self.class_embedding = self.param("class_embedding", jax.nn.initializers.normal(stddev=0.02), (embed_dim,))
self.patch_embedding = nn.Conv(
embed_dim,
kernel_size=(patch_size, patch_size),
strides=(patch_size, patch_size),
padding="VALID",
use_bias=False,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(),
)
self.num_patches = (image_size // patch_size) ** 2
num_positions = self.num_patches + 1
self.position_embedding = nn.Embed(num_positions, embed_dim, embedding_init=jax.nn.initializers.normal())
self.position_ids = jnp.expand_dims(jnp.arange(0, num_positions, dtype="i4"), axis=0)
def __call__(self, pixel_values):
patch_embeds = self.patch_embedding(pixel_values)
batch_size, height, width, channels = patch_embeds.shape
patch_embeds = jnp.reshape(patch_embeds, (batch_size, height * width, channels))
class_embeds = jnp.expand_dims(self.class_embedding, axis=(0, 1))
class_embeds = jnp.tile(class_embeds, (batch_size, 1, 1))
embeddings = jnp.concatenate([class_embeds, patch_embeds], axis=1)
embeddings = embeddings + self.position_embedding(self.position_ids)
return embeddings
class FlaxCLIPTextEmbeddings(nn.Module):
config: CLIPTextConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
embed_dim = self.config.hidden_size
self.token_embedding = nn.Embed(self.config.vocab_size, embed_dim, embedding_init=jax.nn.initializers.normal())
self.position_embedding = nn.Embed(
self.config.max_position_embeddings, embed_dim, embedding_init=jax.nn.initializers.normal()
)
self.position_ids = jnp.expand_dims(
jnp.arange(0, self.config.max_position_embeddings, dtype="i4"), axis=(0, 1)
)
def __call__(self, input_ids, position_ids):
input_embeds = self.token_embedding(input_ids.astype("i4"))
position_embeds = self.position_embedding(position_ids.astype("i4"))
embeddings = input_embeds + position_embeds
return embeddings
class FlaxCLIPAttention(nn.Module):
config: Union[CLIPTextConfig, CLIPVisionConfig]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.embed_dim = self.config.hidden_size
self.num_heads = self.config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = self.config.attention_dropout
self.k_proj = nn.Dense(self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(0.01))
self.v_proj = nn.Dense(self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(0.01))
self.q_proj = nn.Dense(self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(0.01))
self.out_proj = nn.Dense(self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(0.01))
self.causal = isinstance(self.config, CLIPTextConfig)
if self.causal:
self.causal_mask = make_causal_mask(jnp.ones((1, self.config.max_position_embeddings), dtype="i4"))
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.num_heads, self.head_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.embed_dim,))
def __call__(
self,
hidden_states,
attention_mask=None,
deterministic: bool = True,
output_attentions: bool = False,
):
query = self.q_proj(hidden_states)
key = self.k_proj(hidden_states)
value = self.v_proj(hidden_states)
query = self._split_heads(query)
key = self._split_heads(key)
value = self._split_heads(value)
causal_attention_mask = None
if self.causal:
query_length, key_length = query.shape[1], key.shape[1]
causal_attention_mask = self.causal_mask[:, :, key_length - query_length : key_length, :key_length]
if attention_mask is not None and causal_attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
attention_mask = combine_masks(attention_mask, causal_attention_mask, dtype="i4")
elif causal_attention_mask is not None:
attention_mask = causal_attention_mask
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
if attention_mask is not None:
attention_bias = lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, jnp.finfo(self.dtype).min).astype(self.dtype),
)
else:
attention_bias = None
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
attn_weights = dot_product_attention_weights(
query,
key,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value)
attn_output = self._merge_heads(attn_output)
attn_output = self.out_proj(attn_output)
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
class FlaxCLIPMLP(nn.Module):
config: Union[CLIPTextConfig, CLIPVisionConfig]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.activation_fn = ACT2FN[self.config.hidden_act]
self.fc1 = nn.Dense(
self.config.intermediate_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(0.01),
)
self.fc2 = nn.Dense(self.config.hidden_size, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(0.01))
def __call__(self, hidden_states):
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
class FlaxCLIPEncoderLayer(nn.Module):
config: Union[CLIPTextConfig, CLIPVisionConfig]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.self_attn = FlaxCLIPAttention(self.config, dtype=self.dtype)
self.layer_norm1 = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.mlp = FlaxCLIPMLP(self.config, dtype=self.dtype)
self.layer_norm2 = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(
self,
hidden_states,
attention_mask,
deterministic: bool = True,
output_attentions: bool = False,
):
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
attn_outputs = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
)
hidden_states = attn_outputs[0]
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += attn_outputs[1:]
return outputs
class FlaxCLIPLayerCollection(nn.Module):
config: Union[CLIPTextConfig, CLIPVisionConfig]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.layers = [
FlaxCLIPEncoderLayer(self.config, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
def __call__(
self,
hidden_states,
attention_mask=None,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
for layer in self.layers:
if output_hidden_states:
all_hidden_states += (hidden_states,)
layer_outputs = layer(
hidden_states, attention_mask, deterministic=deterministic, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions += (layer_outputs[1],)
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = (hidden_states,)
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class FlaxCLIPEncoder(nn.Module):
config: Union[CLIPTextConfig, CLIPVisionConfig]
dtype: jnp.dtype = jnp.float32
def setup(self):
self.layers = FlaxCLIPLayerCollection(self.config, dtype=self.dtype)
def __call__(
self,
inputs_embeds,
attention_mask=None,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.layers(
hidden_states=inputs_embeds,
attention_mask=attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class FlaxCLIPTextTransformer(nn.Module):
config: CLIPTextConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.embeddings = FlaxCLIPTextEmbeddings(self.config, dtype=self.dtype)
self.encoder = FlaxCLIPEncoder(self.config, dtype=self.dtype)
self.final_layer_norm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
# For `pooled_output` computation
self.eos_token_id = self.config.eos_token_id
def __call__(
self,
input_ids,
attention_mask,
position_ids,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
hidden_states = self.embeddings(input_ids=input_ids, position_ids=position_ids)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
attention_mask=attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
last_hidden_state = self.final_layer_norm(last_hidden_state)
if self.eos_token_id == 2:
# The `eos_token_id` was incorrect before PR #24773: Let's keep what have been done here.
# A CLIP model with such `eos_token_id` in the config can't work correctly with extra new tokens added
# ------------------------------------------------------------
# text_embeds.shape = [batch_size, sequence_length, transformer.width]
# take features from the EOS embedding (eos_token_id is the highest number in each sequence)
pooled_output = last_hidden_state[jnp.arange(last_hidden_state.shape[0]), input_ids.argmax(axis=-1)]
else:
# (no need to cast from bool to int after comparing to `eos_token_id`)
pooled_output = last_hidden_state[
jnp.arange(last_hidden_state.shape[0]), (input_ids == self.eos_token_id).argmax(axis=-1)
]
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return FlaxBaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class FlaxCLIPVisionTransformer(nn.Module):
config: CLIPVisionConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.embeddings = FlaxCLIPVisionEmbeddings(self.config, dtype=self.dtype)
self.pre_layrnorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.encoder = FlaxCLIPEncoder(self.config, dtype=self.dtype)
self.post_layernorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(
self,
pixel_values=None,
deterministic: bool = True,
output_attentions=None,
output_hidden_states=None,
return_dict: bool = True,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
hidden_states = self.embeddings(pixel_values)
hidden_states = self.pre_layrnorm(hidden_states)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
pooled_output = last_hidden_state[:, 0, :]
pooled_output = self.post_layernorm(pooled_output)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return FlaxBaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class FlaxCLIPTextPreTrainedModel(FlaxPreTrainedModel):
config_class = CLIPTextConfig
module_class: nn.Module = None
def __init__(
self,
config: CLIPTextConfig,
input_shape=(1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensor
input_ids = jnp.zeros(input_shape, dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_shape)
attention_mask = jnp.ones_like(input_ids)
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(rngs, input_ids, attention_mask, position_ids)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
def __call__(
self,
input_ids,
attention_mask=None,
position_ids=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
jnp.array(position_ids, dtype="i4"),
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
class FlaxCLIPVisionPreTrainedModel(FlaxPreTrainedModel):
config_class = CLIPVisionConfig
main_input_name = "pixel_values"
module_class: nn.Module = None
def __init__(
self,
config: CLIPVisionConfig,
input_shape: Optional[Tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
if input_shape is None:
input_shape = (1, config.image_size, config.image_size, 3)
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensor
pixel_values = jax.random.normal(rng, input_shape)
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(rngs, pixel_values)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
def __call__(
self,
pixel_values,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
pixel_values = jnp.transpose(pixel_values, (0, 2, 3, 1))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(pixel_values, dtype=jnp.float32),
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
class FlaxCLIPPreTrainedModel(FlaxPreTrainedModel):
config_class = CLIPConfig
module_class: nn.Module = None
def __init__(
self,
config: CLIPConfig,
input_shape: Optional[Tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
if input_shape is None:
input_shape = ((1, 1), (1, config.vision_config.image_size, config.vision_config.image_size, 3))
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensor
input_ids = jnp.zeros(input_shape[0], dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_shape[0])
attention_mask = jnp.ones_like(input_ids)
pixel_values = jax.random.normal(rng, input_shape[1])
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(rngs, input_ids, pixel_values, attention_mask, position_ids)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
def __call__(
self,
input_ids,
pixel_values,
attention_mask=None,
position_ids=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
pixel_values = jnp.transpose(pixel_values, (0, 2, 3, 1))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(input_ids, dtype="i4"),
jnp.array(pixel_values, dtype=jnp.float32),
jnp.array(attention_mask, dtype="i4"),
jnp.array(position_ids, dtype="i4"),
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
def get_text_features(
self,
input_ids,
attention_mask=None,
position_ids=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train=False,
):
r"""
Args:
input_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
Returns:
text_features (`jnp.ndarray` of shape `(batch_size, output_dim`): The text embeddings obtained by applying
the projection layer to the pooled output of [`FlaxCLIPTextModel`].
Examples:
```python
>>> from transformers import AutoTokenizer, FlaxCLIPModel
>>> model = FlaxCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="np")
>>> text_features = model.get_text_features(**inputs)
```"""
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
def _get_features(module, input_ids, attention_mask, position_ids, deterministic):
text_outputs = module.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
deterministic=deterministic,
)
pooled_output = text_outputs[1]
text_features = module.text_projection(pooled_output)
return text_features
return self.module.apply(
{"params": params or self.params},
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
jnp.array(position_ids, dtype="i4"),
not train,
method=_get_features,
rngs=rngs,
)
def get_image_features(
self, pixel_values, params: dict = None, dropout_rng: jax.random.PRNGKey = None, train=False
):
r"""
Args:
pixel_values (`numpy.ndarray` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained
using [`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
Returns:
image_features (`jnp.ndarray` of shape `(batch_size, output_dim`): The image embeddings obtained by
applying the projection layer to the pooled output of [`FlaxCLIPVisionModel`]
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, FlaxCLIPModel
>>> model = FlaxCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="np")
>>> image_features = model.get_image_features(**inputs)
```"""
pixel_values = jnp.transpose(pixel_values, (0, 2, 3, 1))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
def _get_features(module, pixel_values, deterministic):
vision_outputs = module.vision_model(pixel_values=pixel_values, deterministic=deterministic)
pooled_output = vision_outputs[1] # pooled_output
image_features = module.visual_projection(pooled_output)
return image_features
return self.module.apply(
{"params": params or self.params},
jnp.array(pixel_values, dtype=jnp.float32),
not train,
method=_get_features,
rngs=rngs,
)
class FlaxCLIPTextModule(nn.Module):
config: CLIPTextConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.text_model = FlaxCLIPTextTransformer(self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class FlaxCLIPTextModel(FlaxCLIPTextPreTrainedModel):
module_class = FlaxCLIPTextModule
FLAX_CLIP_TEXT_MODEL_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxCLIPTextModel
>>> model = FlaxCLIPTextModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="np")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooler_output = outputs.pooler_output # pooled (EOS token) states
```
"""
overwrite_call_docstring(FlaxCLIPTextModel, CLIP_TEXT_INPUTS_DOCSTRING + FLAX_CLIP_TEXT_MODEL_DOCSTRING)
append_replace_return_docstrings(
FlaxCLIPTextModel, output_type=FlaxBaseModelOutputWithPooling, config_class=CLIPTextConfig
)
class FlaxCLIPTextModelWithProjectionModule(nn.Module):
config: CLIPTextConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.text_model = FlaxCLIPTextTransformer(self.config, dtype=self.dtype)
self.text_projection = nn.Dense(self.config.projection_dim, use_bias=False, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_embeds = self.text_projection(pooled_output)
if not return_dict:
return (text_embeds, text_outputs[0]) + text_outputs[2:]
return FlaxCLIPTextModelOutput(
text_embeds=text_embeds,
last_hidden_state=text_outputs.last_hidden_state,
hidden_states=text_outputs.hidden_states,
attentions=text_outputs.attentions,
)
class FlaxCLIPTextModelWithProjection(FlaxCLIPTextPreTrainedModel):
module_class = FlaxCLIPTextModelWithProjectionModule
FLAX_CLIP_TEXT_MODEL_WITH_PROJECTION_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxCLIPTextModelWithProjection
>>> model = FlaxCLIPTextModelWithProjection.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="np")
>>> outputs = model(**inputs)
>>> text_embeds = outputs.text_embeds
```
"""
overwrite_call_docstring(
FlaxCLIPTextModelWithProjection, CLIP_TEXT_INPUTS_DOCSTRING + FLAX_CLIP_TEXT_MODEL_WITH_PROJECTION_DOCSTRING
)
append_replace_return_docstrings(
FlaxCLIPTextModelWithProjection, output_type=FlaxCLIPTextModelOutput, config_class=CLIPTextConfig
)
class FlaxCLIPVisionModule(nn.Module):
config: CLIPVisionConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.vision_model = FlaxCLIPVisionTransformer(self.config, dtype=self.dtype)
def __call__(
self,
pixel_values,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.vision_model(
pixel_values=pixel_values,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class FlaxCLIPVisionModel(FlaxCLIPVisionPreTrainedModel):
module_class = FlaxCLIPVisionModule
FLAX_CLIP_VISION_MODEL_DOCSTRING = """
Returns:
Example:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, FlaxCLIPVisionModel
>>> model = FlaxCLIPVisionModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="np")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooler_output = outputs.pooler_output # pooled CLS states
```
"""
overwrite_call_docstring(FlaxCLIPVisionModel, CLIP_VISION_INPUTS_DOCSTRING + FLAX_CLIP_VISION_MODEL_DOCSTRING)
append_replace_return_docstrings(
FlaxCLIPVisionModel, output_type=FlaxBaseModelOutputWithPooling, config_class=CLIPVisionConfig
)
class FlaxCLIPModule(nn.Module):
config: CLIPConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
text_config = self.config.text_config
vision_config = self.config.vision_config
self.projection_dim = self.config.projection_dim
self.text_embed_dim = text_config.hidden_size
self.vision_embed_dim = vision_config.hidden_size
self.text_model = FlaxCLIPTextTransformer(text_config, dtype=self.dtype)
self.vision_model = FlaxCLIPVisionTransformer(vision_config, dtype=self.dtype)
self.visual_projection = nn.Dense(
self.projection_dim,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(0.02),
use_bias=False,
)
self.text_projection = nn.Dense(
self.projection_dim,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(0.02),
use_bias=False,
)
self.logit_scale = self.param(
"logit_scale", lambda _, shape: jnp.ones(shape) * self.config.logit_scale_init_value, []
)
def __call__(
self,
input_ids=None,
pixel_values=None,
attention_mask=None,
position_ids=None,
deterministic: bool = True,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
return_dict = return_dict if return_dict is not None else self.config.return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(text_embeds)
# normalized features
image_embeds = image_embeds / jnp.linalg.norm(image_embeds, axis=-1, keepdims=True)
text_embeds = text_embeds / jnp.linalg.norm(text_embeds, axis=-1, keepdims=True)
# cosine similarity as logits
logit_scale = jnp.exp(self.logit_scale)
logits_per_text = jnp.matmul(text_embeds, image_embeds.T) * logit_scale
logits_per_image = logits_per_text.T
if not return_dict:
return (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return FlaxCLIPOutput(
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
@add_start_docstrings(CLIP_START_DOCSTRING)
class FlaxCLIPModel(FlaxCLIPPreTrainedModel):
module_class = FlaxCLIPModule
FLAX_CLIP_MODEL_DOCSTRING = """
Returns:
Example:
```python
>>> import jax
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, FlaxCLIPModel
>>> model = FlaxCLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="np", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = jax.nn.softmax(logits_per_image, axis=1) # we can take the softmax to get the label probabilities
```
"""
overwrite_call_docstring(FlaxCLIPModel, CLIP_INPUTS_DOCSTRING + FLAX_CLIP_MODEL_DOCSTRING)
append_replace_return_docstrings(FlaxCLIPModel, output_type=FlaxCLIPOutput, config_class=CLIPConfig)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/convert_clip_original_pytorch_to_hf.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import torch
from clip import load
from transformers import CLIPConfig, CLIPModel
def copy_attn_layer(hf_attn_layer, pt_attn_layer):
q_proj, k_proj, v_proj = pt_attn_layer.in_proj_weight.chunk(3, dim=0)
q_proj_bias, k_proj_bias, v_proj_bias = pt_attn_layer.in_proj_bias.chunk(3, dim=0)
out_proj_weights = pt_attn_layer.out_proj.weight
out_proj_bias = pt_attn_layer.out_proj.bias
hf_attn_layer.q_proj.weight.data = q_proj
hf_attn_layer.q_proj.bias.data = q_proj_bias
hf_attn_layer.k_proj.weight.data = k_proj
hf_attn_layer.k_proj.bias.data = k_proj_bias
hf_attn_layer.v_proj.weight.data = v_proj
hf_attn_layer.v_proj.bias.data = v_proj_bias
hf_attn_layer.out_proj.weight = out_proj_weights
hf_attn_layer.out_proj.bias = out_proj_bias
def copy_mlp(hf_mlp, pt_mlp):
copy_linear(hf_mlp.fc1, pt_mlp.c_fc)
copy_linear(hf_mlp.fc2, pt_mlp.c_proj)
def copy_linear(hf_linear, pt_linear):
hf_linear.weight = pt_linear.weight
hf_linear.bias = pt_linear.bias
def copy_layer(hf_layer, pt_layer):
# copy layer norms
copy_linear(hf_layer.layer_norm1, pt_layer.ln_1)
copy_linear(hf_layer.layer_norm2, pt_layer.ln_2)
# copy MLP
copy_mlp(hf_layer.mlp, pt_layer.mlp)
# copy attn
copy_attn_layer(hf_layer.self_attn, pt_layer.attn)
def copy_layers(hf_layers, pt_layers):
for hf_layer, pt_layer in zip(hf_layers, pt_layers):
copy_layer(hf_layer, pt_layer)
def copy_encoder(hf_encoder, pt_model):
# copy embeds
hf_encoder.embeddings.token_embedding.weight = pt_model.token_embedding.weight
hf_encoder.embeddings.position_embedding.weight.data = pt_model.positional_embedding
# copy layer norm
copy_linear(hf_encoder.final_layer_norm, pt_model.ln_final)
# copy hidden layers
copy_layers(hf_encoder.encoder.layers, pt_model.transformer.resblocks)
def copy_text_model_and_projection(hf_model, pt_model):
# copy projection
hf_model.text_projection.weight.data = pt_model.text_projection.data.T
# copy text encoder
copy_encoder(hf_model.text_model, pt_model)
def copy_vison_model_and_projection(hf_model, pt_model):
# copy projection
hf_model.visual_projection.weight.data = pt_model.visual.proj.data.T
# copy layer norms
copy_linear(hf_model.vision_model.pre_layrnorm, pt_model.visual.ln_pre)
copy_linear(hf_model.vision_model.post_layernorm, pt_model.visual.ln_post)
# copy embeds
hf_model.vision_model.embeddings.patch_embedding.weight.data = pt_model.visual.conv1.weight.data
hf_model.vision_model.embeddings.class_embedding = pt_model.visual.class_embedding
hf_model.vision_model.embeddings.position_embedding.weight.data = pt_model.visual.positional_embedding.data
# copy encoder
copy_layers(hf_model.vision_model.encoder.layers, pt_model.visual.transformer.resblocks)
@torch.no_grad()
def convert_clip_checkpoint(checkpoint_path, pytorch_dump_folder_path, config_path=None):
"""
Copy/paste/tweak model's weights to transformers design.
"""
if config_path is not None:
config = CLIPConfig.from_pretrained(config_path)
else:
config = CLIPConfig(projection_dim=512, text_config={}, vision_config={})
hf_model = CLIPModel(config).eval()
pt_model, _ = load(checkpoint_path, device="cpu", jit=False)
pt_model = pt_model.eval()
copy_text_model_and_projection(hf_model, pt_model)
copy_vison_model_and_projection(hf_model, pt_model)
hf_model.logit_scale = pt_model.logit_scale
input_ids = torch.arange(0, 77).unsqueeze(0)
pixel_values = torch.randn(1, 3, 224, 224)
hf_outputs = hf_model(input_ids=input_ids, pixel_values=pixel_values, return_dict=True)
hf_logits_per_image = hf_outputs.logits_per_image
hf_logits_per_text = hf_outputs.logits_per_text
pt_logits_per_image, pt_logits_per_text = pt_model(pixel_values, input_ids)
assert torch.allclose(hf_logits_per_image, pt_logits_per_image, atol=1e-3)
assert torch.allclose(hf_logits_per_text, pt_logits_per_text, atol=1e-3)
hf_model.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument("--checkpoint_path", default=None, type=str, help="Path to fairseq checkpoint")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
args = parser.parse_args()
convert_clip_checkpoint(args.checkpoint_path, args.pytorch_dump_folder_path, args.config_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/image_processing_clip.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for CLIP."""
from typing import Dict, List, Optional, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import (
convert_to_rgb,
get_resize_output_image_size,
resize,
to_channel_dimension_format,
)
from ...image_utils import (
OPENAI_CLIP_MEAN,
OPENAI_CLIP_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
infer_channel_dimension_format,
is_scaled_image,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, is_vision_available, logging
logger = logging.get_logger(__name__)
if is_vision_available():
import PIL
class CLIPImageProcessor(BaseImageProcessor):
r"""
Constructs a CLIP image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `size`. Can be overridden by
`do_resize` in the `preprocess` method.
size (`Dict[str, int]` *optional*, defaults to `{"shortest_edge": 224}`):
Size of the image after resizing. The shortest edge of the image is resized to size["shortest_edge"], with
the longest edge resized to keep the input aspect ratio. Can be overridden by `size` in the `preprocess`
method.
resample (`PILImageResampling`, *optional*, defaults to `Resampling.BICUBIC`):
Resampling filter to use if resizing the image. Can be overridden by `resample` in the `preprocess` method.
do_center_crop (`bool`, *optional*, defaults to `True`):
Whether to center crop the image to the specified `crop_size`. Can be overridden by `do_center_crop` in the
`preprocess` method.
crop_size (`Dict[str, int]` *optional*, defaults to 224):
Size of the output image after applying `center_crop`. Can be overridden by `crop_size` in the `preprocess`
method.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by `do_rescale` in
the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by `rescale_factor` in the `preprocess`
method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by `do_normalize` in the `preprocess` method.
image_mean (`float` or `List[float]`, *optional*, defaults to `[0.48145466, 0.4578275, 0.40821073]`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `[0.26862954, 0.26130258, 0.27577711]`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
Can be overridden by the `image_std` parameter in the `preprocess` method.
do_convert_rgb (`bool`, *optional*, defaults to `True`):
Whether to convert the image to RGB.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BICUBIC,
do_center_crop: bool = True,
crop_size: Dict[str, int] = None,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_convert_rgb: bool = True,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"shortest_edge": 224}
size = get_size_dict(size, default_to_square=False)
crop_size = crop_size if crop_size is not None else {"height": 224, "width": 224}
crop_size = get_size_dict(crop_size, default_to_square=True, param_name="crop_size")
self.do_resize = do_resize
self.size = size
self.resample = resample
self.do_center_crop = do_center_crop
self.crop_size = crop_size
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else OPENAI_CLIP_MEAN
self.image_std = image_std if image_std is not None else OPENAI_CLIP_STD
self.do_convert_rgb = do_convert_rgb
# for backwards compatibility of KOSMOS-2
if "use_square_size" in kwargs:
self.size = {"height": size["shortest_edge"], "width": size["shortest_edge"]}
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image. The shortest edge of the image is resized to size["shortest_edge"], with the longest edge
resized to keep the input aspect ratio.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Size of the output image.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use when resiizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format of the input image. If not provided, it will be inferred.
"""
default_to_square = True
if "shortest_edge" in size:
size = size["shortest_edge"]
default_to_square = False
elif "height" in size and "width" in size:
size = (size["height"], size["width"])
else:
raise ValueError("Size must contain either 'shortest_edge' or 'height' and 'width'.")
output_size = get_resize_output_image_size(
image,
size=size,
default_to_square=default_to_square,
input_data_format=input_data_format,
)
return resize(
image,
size=output_size,
resample=resample,
data_format=data_format,
input_data_format=input_data_format,
**kwargs,
)
def preprocess(
self,
images: ImageInput,
do_resize: bool = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_center_crop: bool = None,
crop_size: int = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
do_convert_rgb: bool = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Optional[ChannelDimension] = ChannelDimension.FIRST,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> PIL.Image.Image:
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess. Expects a single or batch of images with pixel values ranging from 0 to 255. If
passing in images with pixel values between 0 and 1, set `do_rescale=False`.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after resizing. Shortest edge of the image is resized to size["shortest_edge"], with
the longest edge resized to keep the input aspect ratio.
resample (`int`, *optional*, defaults to `self.resample`):
Resampling filter to use if resizing the image. This can be one of the enum `PILImageResampling`. Only
has an effect if `do_resize` is set to `True`.
do_center_crop (`bool`, *optional*, defaults to `self.do_center_crop`):
Whether to center crop the image.
crop_size (`Dict[str, int]`, *optional*, defaults to `self.crop_size`):
Size of the center crop. Only has an effect if `do_center_crop` is set to `True`.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image.
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean to use for normalization. Only has an effect if `do_normalize` is set to `True`.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation to use for normalization. Only has an effect if `do_normalize` is set to
`True`.
do_convert_rgb (`bool`, *optional*, defaults to `self.do_convert_rgb`):
Whether to convert the image to RGB.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- Unset: Use the channel dimension format of the input image.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the input image. If unset, the channel dimension format is inferred
from the input image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- `"none"` or `ChannelDimension.NONE`: image in (height, width) format.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(size, param_name="size", default_to_square=False)
resample = resample if resample is not None else self.resample
do_center_crop = do_center_crop if do_center_crop is not None else self.do_center_crop
crop_size = crop_size if crop_size is not None else self.crop_size
crop_size = get_size_dict(crop_size, param_name="crop_size", default_to_square=True)
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
do_convert_rgb = do_convert_rgb if do_convert_rgb is not None else self.do_convert_rgb
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None:
raise ValueError("Size must be specified if do_resize is True.")
if do_center_crop and crop_size is None:
raise ValueError("Crop size must be specified if do_center_crop is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
# PIL RGBA images are converted to RGB
if do_convert_rgb:
images = [convert_to_rgb(image) for image in images]
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
if is_scaled_image(images[0]) and do_rescale:
logger.warning_once(
"It looks like you are trying to rescale already rescaled images. If the input"
" images have pixel values between 0 and 1, set `do_rescale=False` to avoid rescaling them again."
)
if input_data_format is None:
# We assume that all images have the same channel dimension format.
input_data_format = infer_channel_dimension_format(images[0])
if do_resize:
images = [
self.resize(image=image, size=size, resample=resample, input_data_format=input_data_format)
for image in images
]
if do_center_crop:
images = [
self.center_crop(image=image, size=crop_size, input_data_format=input_data_format) for image in images
]
if do_rescale:
images = [
self.rescale(image=image, scale=rescale_factor, input_data_format=input_data_format)
for image in images
]
if do_normalize:
images = [
self.normalize(image=image, mean=image_mean, std=image_std, input_data_format=input_data_format)
for image in images
]
images = [
to_channel_dimension_format(image, data_format, input_channel_dim=input_data_format) for image in images
]
data = {"pixel_values": images}
return BatchFeature(data=data, tensor_type=return_tensors)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
is_vision_available,
)
_import_structure = {
"configuration_clip": [
"CLIP_PRETRAINED_CONFIG_ARCHIVE_MAP",
"CLIPConfig",
"CLIPOnnxConfig",
"CLIPTextConfig",
"CLIPVisionConfig",
],
"processing_clip": ["CLIPProcessor"],
"tokenization_clip": ["CLIPTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_clip_fast"] = ["CLIPTokenizerFast"]
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_clip"] = ["CLIPFeatureExtractor"]
_import_structure["image_processing_clip"] = ["CLIPImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_clip"] = [
"CLIP_PRETRAINED_MODEL_ARCHIVE_LIST",
"CLIPModel",
"CLIPPreTrainedModel",
"CLIPTextModel",
"CLIPTextModelWithProjection",
"CLIPVisionModel",
"CLIPVisionModelWithProjection",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_clip"] = [
"TF_CLIP_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFCLIPModel",
"TFCLIPPreTrainedModel",
"TFCLIPTextModel",
"TFCLIPVisionModel",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_clip"] = [
"FlaxCLIPModel",
"FlaxCLIPPreTrainedModel",
"FlaxCLIPTextModel",
"FlaxCLIPTextPreTrainedModel",
"FlaxCLIPTextModelWithProjection",
"FlaxCLIPVisionModel",
"FlaxCLIPVisionPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_clip import (
CLIP_PRETRAINED_CONFIG_ARCHIVE_MAP,
CLIPConfig,
CLIPOnnxConfig,
CLIPTextConfig,
CLIPVisionConfig,
)
from .processing_clip import CLIPProcessor
from .tokenization_clip import CLIPTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_clip_fast import CLIPTokenizerFast
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_clip import CLIPFeatureExtractor
from .image_processing_clip import CLIPImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_clip import (
CLIP_PRETRAINED_MODEL_ARCHIVE_LIST,
CLIPModel,
CLIPPreTrainedModel,
CLIPTextModel,
CLIPTextModelWithProjection,
CLIPVisionModel,
CLIPVisionModelWithProjection,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_clip import (
TF_CLIP_PRETRAINED_MODEL_ARCHIVE_LIST,
TFCLIPModel,
TFCLIPPreTrainedModel,
TFCLIPTextModel,
TFCLIPVisionModel,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_clip import (
FlaxCLIPModel,
FlaxCLIPPreTrainedModel,
FlaxCLIPTextModel,
FlaxCLIPTextModelWithProjection,
FlaxCLIPTextPreTrainedModel,
FlaxCLIPVisionModel,
FlaxCLIPVisionPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/processing_clip.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Image/Text processor class for CLIP
"""
import warnings
from ...processing_utils import ProcessorMixin
from ...tokenization_utils_base import BatchEncoding
class CLIPProcessor(ProcessorMixin):
r"""
Constructs a CLIP processor which wraps a CLIP image processor and a CLIP tokenizer into a single processor.
[`CLIPProcessor`] offers all the functionalities of [`CLIPImageProcessor`] and [`CLIPTokenizerFast`]. See the
[`~CLIPProcessor.__call__`] and [`~CLIPProcessor.decode`] for more information.
Args:
image_processor ([`CLIPImageProcessor`], *optional*):
The image processor is a required input.
tokenizer ([`CLIPTokenizerFast`], *optional*):
The tokenizer is a required input.
"""
attributes = ["image_processor", "tokenizer"]
image_processor_class = "CLIPImageProcessor"
tokenizer_class = ("CLIPTokenizer", "CLIPTokenizerFast")
def __init__(self, image_processor=None, tokenizer=None, **kwargs):
feature_extractor = None
if "feature_extractor" in kwargs:
warnings.warn(
"The `feature_extractor` argument is deprecated and will be removed in v5, use `image_processor`"
" instead.",
FutureWarning,
)
feature_extractor = kwargs.pop("feature_extractor")
image_processor = image_processor if image_processor is not None else feature_extractor
if image_processor is None:
raise ValueError("You need to specify an `image_processor`.")
if tokenizer is None:
raise ValueError("You need to specify a `tokenizer`.")
super().__init__(image_processor, tokenizer)
def __call__(self, text=None, images=None, return_tensors=None, **kwargs):
"""
Main method to prepare for the model one or several sequences(s) and image(s). This method forwards the `text`
and `kwargs` arguments to CLIPTokenizerFast's [`~CLIPTokenizerFast.__call__`] if `text` is not `None` to encode
the text. To prepare the image(s), this method forwards the `images` and `kwrags` arguments to
CLIPImageProcessor's [`~CLIPImageProcessor.__call__`] if `images` is not `None`. Please refer to the doctsring
of the above two methods for more information.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string or a list of strings
(pretokenized string). If the sequences are provided as list of strings (pretokenized), you must set
`is_split_into_words=True` (to lift the ambiguity with a batch of sequences).
images (`PIL.Image.Image`, `np.ndarray`, `torch.Tensor`, `List[PIL.Image.Image]`, `List[np.ndarray]`, `List[torch.Tensor]`):
The image or batch of images to be prepared. Each image can be a PIL image, NumPy array or PyTorch
tensor. In case of a NumPy array/PyTorch tensor, each image should be of shape (C, H, W), where C is a
number of channels, H and W are image height and width.
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors of a particular framework. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return NumPy `np.ndarray` objects.
- `'jax'`: Return JAX `jnp.ndarray` objects.
Returns:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model. Returned when `text` is not `None`.
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names` and if `text` is not
`None`).
- **pixel_values** -- Pixel values to be fed to a model. Returned when `images` is not `None`.
"""
if text is None and images is None:
raise ValueError("You have to specify either text or images. Both cannot be none.")
if text is not None:
encoding = self.tokenizer(text, return_tensors=return_tensors, **kwargs)
if images is not None:
image_features = self.image_processor(images, return_tensors=return_tensors, **kwargs)
if text is not None and images is not None:
encoding["pixel_values"] = image_features.pixel_values
return encoding
elif text is not None:
return encoding
else:
return BatchEncoding(data=dict(**image_features), tensor_type=return_tensors)
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to CLIPTokenizerFast's [`~PreTrainedTokenizer.batch_decode`]. Please
refer to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to CLIPTokenizerFast's [`~PreTrainedTokenizer.decode`]. Please refer to
the docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
@property
def model_input_names(self):
tokenizer_input_names = self.tokenizer.model_input_names
image_processor_input_names = self.image_processor.model_input_names
return list(dict.fromkeys(tokenizer_input_names + image_processor_input_names))
@property
def feature_extractor_class(self):
warnings.warn(
"`feature_extractor_class` is deprecated and will be removed in v5. Use `image_processor_class` instead.",
FutureWarning,
)
return self.image_processor_class
@property
def feature_extractor(self):
warnings.warn(
"`feature_extractor` is deprecated and will be removed in v5. Use `image_processor` instead.",
FutureWarning,
)
return self.image_processor
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/modeling_clip.py | # coding=utf-8
# Copyright 2021 The OpenAI Team Authors and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch CLIP model."""
from dataclasses import dataclass
from typing import Any, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from ...activations import ACT2FN
from ...modeling_attn_mask_utils import _create_4d_causal_attention_mask, _prepare_4d_attention_mask
from ...modeling_outputs import BaseModelOutput, BaseModelOutputWithPooling
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_clip import CLIPConfig, CLIPTextConfig, CLIPVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "openai/clip-vit-base-patch32"
CLIP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"openai/clip-vit-base-patch32",
# See all CLIP models at https://huggingface.co/models?filter=clip
]
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/2021-03-07-clip.html
def contrastive_loss(logits: torch.Tensor) -> torch.Tensor:
return nn.functional.cross_entropy(logits, torch.arange(len(logits), device=logits.device))
def clip_loss(similarity: torch.Tensor) -> torch.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(similarity.t())
return (caption_loss + image_loss) / 2.0
@dataclass
class CLIPVisionModelOutput(ModelOutput):
"""
Base class for vision model's outputs that also contains image embeddings of the pooling of the last hidden states.
Args:
image_embeds (`torch.FloatTensor` of shape `(batch_size, output_dim)` *optional* returned when model is initialized with `with_projection=True`):
The image embeddings obtained by applying the projection layer to the pooler_output.
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
image_embeds: Optional[torch.FloatTensor] = None
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class CLIPTextModelOutput(ModelOutput):
"""
Base class for text model's outputs that also contains a pooling of the last hidden states.
Args:
text_embeds (`torch.FloatTensor` of shape `(batch_size, output_dim)` *optional* returned when model is initialized with `with_projection=True`):
The text embeddings obtained by applying the projection layer to the pooler_output.
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
text_embeds: Optional[torch.FloatTensor] = None
last_hidden_state: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class CLIPOutput(ModelOutput):
"""
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image:(`torch.FloatTensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text:(`torch.FloatTensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
text_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of [`CLIPTextModel`].
image_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of [`CLIPVisionModel`].
text_model_output(`BaseModelOutputWithPooling`):
The output of the [`CLIPTextModel`].
vision_model_output(`BaseModelOutputWithPooling`):
The output of the [`CLIPVisionModel`].
"""
loss: Optional[torch.FloatTensor] = None
logits_per_image: torch.FloatTensor = None
logits_per_text: torch.FloatTensor = None
text_embeds: torch.FloatTensor = None
image_embeds: torch.FloatTensor = None
text_model_output: BaseModelOutputWithPooling = None
vision_model_output: BaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
class CLIPVisionEmbeddings(nn.Module):
def __init__(self, config: CLIPVisionConfig):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.image_size = config.image_size
self.patch_size = config.patch_size
self.class_embedding = nn.Parameter(torch.randn(self.embed_dim))
self.patch_embedding = nn.Conv2d(
in_channels=config.num_channels,
out_channels=self.embed_dim,
kernel_size=self.patch_size,
stride=self.patch_size,
bias=False,
)
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.position_embedding = nn.Embedding(self.num_positions, self.embed_dim)
self.register_buffer("position_ids", torch.arange(self.num_positions).expand((1, -1)), persistent=False)
def forward(self, pixel_values: torch.FloatTensor) -> torch.Tensor:
batch_size = pixel_values.shape[0]
target_dtype = self.patch_embedding.weight.dtype
patch_embeds = self.patch_embedding(pixel_values.to(dtype=target_dtype)) # shape = [*, width, grid, grid]
patch_embeds = patch_embeds.flatten(2).transpose(1, 2)
class_embeds = self.class_embedding.expand(batch_size, 1, -1)
embeddings = torch.cat([class_embeds, patch_embeds], dim=1)
embeddings = embeddings + self.position_embedding(self.position_ids)
return embeddings
class CLIPTextEmbeddings(nn.Module):
def __init__(self, config: CLIPTextConfig):
super().__init__()
embed_dim = config.hidden_size
self.token_embedding = nn.Embedding(config.vocab_size, embed_dim)
self.position_embedding = nn.Embedding(config.max_position_embeddings, embed_dim)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
) -> torch.Tensor:
seq_length = input_ids.shape[-1] if input_ids is not None else inputs_embeds.shape[-2]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
if inputs_embeds is None:
inputs_embeds = self.token_embedding(input_ids)
position_embeddings = self.position_embedding(position_ids)
embeddings = inputs_embeds + position_embeddings
return embeddings
class CLIPAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.num_heads = config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = config.attention_dropout
self.k_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.v_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.q_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.out_proj = nn.Linear(self.embed_dim, self.embed_dim)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
bsz, tgt_len, embed_dim = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scale
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
if causal_attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {causal_attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + causal_attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit akward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(bsz, tgt_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
class CLIPMLP(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.activation_fn = ACT2FN[config.hidden_act]
self.fc1 = nn.Linear(config.hidden_size, config.intermediate_size)
self.fc2 = nn.Linear(config.intermediate_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
class CLIPEncoderLayer(nn.Module):
def __init__(self, config: CLIPConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = CLIPAttention(config)
self.layer_norm1 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
self.mlp = CLIPMLP(config)
self.layer_norm2 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
causal_attention_mask: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class CLIPPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CLIPConfig
base_model_prefix = "clip"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor
if isinstance(module, CLIPTextEmbeddings):
module.token_embedding.weight.data.normal_(mean=0.0, std=factor * 0.02)
module.position_embedding.weight.data.normal_(mean=0.0, std=factor * 0.02)
elif isinstance(module, CLIPVisionEmbeddings):
factor = self.config.initializer_factor
nn.init.normal_(module.class_embedding, mean=0.0, std=module.embed_dim**-0.5 * factor)
nn.init.normal_(module.patch_embedding.weight, std=module.config.initializer_range * factor)
nn.init.normal_(module.position_embedding.weight, std=module.config.initializer_range * factor)
elif isinstance(module, CLIPAttention):
factor = self.config.initializer_factor
in_proj_std = (module.embed_dim**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (module.embed_dim**-0.5) * factor
nn.init.normal_(module.q_proj.weight, std=in_proj_std)
nn.init.normal_(module.k_proj.weight, std=in_proj_std)
nn.init.normal_(module.v_proj.weight, std=in_proj_std)
nn.init.normal_(module.out_proj.weight, std=out_proj_std)
elif isinstance(module, CLIPMLP):
factor = self.config.initializer_factor
in_proj_std = (module.config.hidden_size**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
fc_std = (2 * module.config.hidden_size) ** -0.5 * factor
nn.init.normal_(module.fc1.weight, std=fc_std)
nn.init.normal_(module.fc2.weight, std=in_proj_std)
elif isinstance(module, CLIPModel):
nn.init.normal_(
module.text_projection.weight,
std=module.text_embed_dim**-0.5 * self.config.initializer_factor,
)
nn.init.normal_(
module.visual_projection.weight,
std=module.vision_embed_dim**-0.5 * self.config.initializer_factor,
)
elif isinstance(module, CLIPVisionModelWithProjection):
nn.init.normal_(
module.visual_projection.weight,
std=self.config.hidden_size**-0.5 * self.config.initializer_factor,
)
elif isinstance(module, CLIPTextModelWithProjection):
nn.init.normal_(
module.text_projection.weight,
std=self.config.hidden_size**-0.5 * self.config.initializer_factor,
)
if isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
if isinstance(module, nn.Linear) and module.bias is not None:
module.bias.data.zero_()
CLIP_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`CLIPConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CLIP_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
CLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
CLIP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class CLIPEncoder(nn.Module):
"""
Transformer encoder consisting of `config.num_hidden_layers` self attention layers. Each layer is a
[`CLIPEncoderLayer`].
Args:
config: CLIPConfig
"""
def __init__(self, config: CLIPConfig):
super().__init__()
self.config = config
self.layers = nn.ModuleList([CLIPEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
causal_attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Causal mask for the text model. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
hidden_states = inputs_embeds
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
encoder_layer.__call__,
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class CLIPTextTransformer(nn.Module):
def __init__(self, config: CLIPTextConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = CLIPTextEmbeddings(config)
self.encoder = CLIPEncoder(config)
self.final_layer_norm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
# For `pooled_output` computation
self.eos_token_id = config.eos_token_id
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=CLIPTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None:
raise ValueError("You have to specify input_ids")
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
hidden_states = self.embeddings(input_ids=input_ids, position_ids=position_ids)
# CLIP's text model uses causal mask, prepare it here.
# https://github.com/openai/CLIP/blob/cfcffb90e69f37bf2ff1e988237a0fbe41f33c04/clip/model.py#L324
causal_attention_mask = _create_4d_causal_attention_mask(
input_shape, hidden_states.dtype, device=hidden_states.device
)
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _prepare_4d_attention_mask(attention_mask, hidden_states.dtype)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
last_hidden_state = self.final_layer_norm(last_hidden_state)
if self.eos_token_id == 2:
# The `eos_token_id` was incorrect before PR #24773: Let's keep what have been done here.
# A CLIP model with such `eos_token_id` in the config can't work correctly with extra new tokens added
# ------------------------------------------------------------
# text_embeds.shape = [batch_size, sequence_length, transformer.width]
# take features from the eot embedding (eot_token is the highest number in each sequence)
# casting to torch.int for onnx compatibility: argmax doesn't support int64 inputs with opset 14
pooled_output = last_hidden_state[
torch.arange(last_hidden_state.shape[0], device=last_hidden_state.device),
input_ids.to(dtype=torch.int, device=last_hidden_state.device).argmax(dim=-1),
]
else:
# The config gets updated `eos_token_id` from PR #24773 (so the use of exta new tokens is possible)
pooled_output = last_hidden_state[
torch.arange(last_hidden_state.shape[0], device=last_hidden_state.device),
# We need to get the first position of `eos_token_id` value (`pad_token_ids` might equal to `eos_token_id`)
(input_ids.to(dtype=torch.int, device=last_hidden_state.device) == self.eos_token_id)
.int()
.argmax(dim=-1),
]
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""The text model from CLIP without any head or projection on top.""",
CLIP_START_DOCSTRING,
)
class CLIPTextModel(CLIPPreTrainedModel):
config_class = CLIPTextConfig
_no_split_modules = ["CLIPTextEmbeddings", "CLIPEncoderLayer"]
def __init__(self, config: CLIPTextConfig):
super().__init__(config)
self.text_model = CLIPTextTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.text_model.embeddings.token_embedding
def set_input_embeddings(self, value):
self.text_model.embeddings.token_embedding = value
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=CLIPTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, CLIPTextModel
>>> model = CLIPTextModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled (EOS token) states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
return self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class CLIPVisionTransformer(nn.Module):
def __init__(self, config: CLIPVisionConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = CLIPVisionEmbeddings(config)
self.pre_layrnorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
self.encoder = CLIPEncoder(config)
self.post_layernorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=CLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.embeddings(pixel_values)
hidden_states = self.pre_layrnorm(hidden_states)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
pooled_output = last_hidden_state[:, 0, :]
pooled_output = self.post_layernorm(pooled_output)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""The vision model from CLIP without any head or projection on top.""",
CLIP_START_DOCSTRING,
)
class CLIPVisionModel(CLIPPreTrainedModel):
config_class = CLIPVisionConfig
main_input_name = "pixel_values"
_no_split_modules = ["CLIPEncoderLayer"]
def __init__(self, config: CLIPVisionConfig):
super().__init__(config)
self.vision_model = CLIPVisionTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.vision_model.embeddings.patch_embedding
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=CLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, CLIPVisionModel
>>> model = CLIPVisionModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
return self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
@add_start_docstrings(CLIP_START_DOCSTRING)
class CLIPModel(CLIPPreTrainedModel):
config_class = CLIPConfig
def __init__(self, config: CLIPConfig):
super().__init__(config)
if not isinstance(config.text_config, CLIPTextConfig):
raise ValueError(
"config.text_config is expected to be of type CLIPTextConfig but is of type"
f" {type(config.text_config)}."
)
if not isinstance(config.vision_config, CLIPVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type CLIPVisionConfig but is of type"
f" {type(config.vision_config)}."
)
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.text_embed_dim = text_config.hidden_size
self.vision_embed_dim = vision_config.hidden_size
self.text_model = CLIPTextTransformer(text_config)
self.vision_model = CLIPVisionTransformer(vision_config)
self.visual_projection = nn.Linear(self.vision_embed_dim, self.projection_dim, bias=False)
self.text_projection = nn.Linear(self.text_embed_dim, self.projection_dim, bias=False)
self.logit_scale = nn.Parameter(torch.tensor(self.config.logit_scale_init_value))
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING)
def get_text_features(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
text_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The text embeddings obtained by
applying the projection layer to the pooled output of [`CLIPTextModel`].
Examples:
```python
>>> from transformers import AutoTokenizer, CLIPModel
>>> model = CLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> text_features = model.get_text_features(**inputs)
```"""
# Use CLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_features = self.text_projection(pooled_output)
return text_features
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
image_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The image embeddings obtained by
applying the projection layer to the pooled output of [`CLIPVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, CLIPModel
>>> model = CLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> image_features = model.get_image_features(**inputs)
```"""
# Use CLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = vision_outputs[1] # pooled_output
image_features = self.visual_projection(pooled_output)
return image_features
@add_start_docstrings_to_model_forward(CLIP_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=CLIPOutput, config_class=CLIPConfig)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
pixel_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CLIPOutput]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, CLIPModel
>>> model = CLIPModel.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="pt", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = logits_per_image.softmax(dim=1) # we can take the softmax to get the label probabilities
```"""
# Use CLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(text_embeds)
# normalized features
image_embeds = image_embeds / image_embeds.norm(p=2, dim=-1, keepdim=True)
text_embeds = text_embeds / text_embeds.norm(p=2, dim=-1, keepdim=True)
# cosine similarity as logits
logit_scale = self.logit_scale.exp()
logits_per_text = torch.matmul(text_embeds, image_embeds.t()) * logit_scale
logits_per_image = logits_per_text.t()
loss = None
if return_loss:
loss = clip_loss(logits_per_text)
if not return_dict:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return ((loss,) + output) if loss is not None else output
return CLIPOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
@add_start_docstrings(
"""
CLIP Text Model with a projection layer on top (a linear layer on top of the pooled output).
""",
CLIP_START_DOCSTRING,
)
class CLIPTextModelWithProjection(CLIPPreTrainedModel):
config_class = CLIPTextConfig
_no_split_modules = ["CLIPTextEmbeddings", "CLIPEncoderLayer"]
def __init__(self, config: CLIPTextConfig):
super().__init__(config)
self.text_model = CLIPTextTransformer(config)
self.text_projection = nn.Linear(config.hidden_size, config.projection_dim, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.text_model.embeddings.token_embedding
def set_input_embeddings(self, value):
self.text_model.embeddings.token_embedding = value
@add_start_docstrings_to_model_forward(CLIP_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=CLIPTextModelOutput, config_class=CLIPTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CLIPTextModelOutput]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, CLIPTextModelWithProjection
>>> model = CLIPTextModelWithProjection.from_pretrained("openai/clip-vit-base-patch32")
>>> tokenizer = AutoTokenizer.from_pretrained("openai/clip-vit-base-patch32")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> outputs = model(**inputs)
>>> text_embeds = outputs.text_embeds
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_embeds = self.text_projection(pooled_output)
if not return_dict:
outputs = (text_embeds, text_outputs[0]) + text_outputs[2:]
return tuple(output for output in outputs if output is not None)
return CLIPTextModelOutput(
text_embeds=text_embeds,
last_hidden_state=text_outputs.last_hidden_state,
hidden_states=text_outputs.hidden_states,
attentions=text_outputs.attentions,
)
@add_start_docstrings(
"""
CLIP Vision Model with a projection layer on top (a linear layer on top of the pooled output).
""",
CLIP_START_DOCSTRING,
)
class CLIPVisionModelWithProjection(CLIPPreTrainedModel):
config_class = CLIPVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: CLIPVisionConfig):
super().__init__(config)
self.vision_model = CLIPVisionTransformer(config)
self.visual_projection = nn.Linear(config.hidden_size, config.projection_dim, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.vision_model.embeddings.patch_embedding
@add_start_docstrings_to_model_forward(CLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=CLIPVisionModelOutput, config_class=CLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CLIPVisionModelOutput]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, CLIPVisionModelWithProjection
>>> model = CLIPVisionModelWithProjection.from_pretrained("openai/clip-vit-base-patch32")
>>> processor = AutoProcessor.from_pretrained("openai/clip-vit-base-patch32")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> image_embeds = outputs.image_embeds
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = vision_outputs[1] # pooled_output
image_embeds = self.visual_projection(pooled_output)
if not return_dict:
outputs = (image_embeds, vision_outputs[0]) + vision_outputs[2:]
return tuple(output for output in outputs if output is not None)
return CLIPVisionModelOutput(
image_embeds=image_embeds,
last_hidden_state=vision_outputs.last_hidden_state,
hidden_states=vision_outputs.hidden_states,
attentions=vision_outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/tokenization_clip.py | # coding=utf-8
# Copyright 2021 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for CLIP."""
import json
import os
import unicodedata
from functools import lru_cache
from typing import List, Optional, Tuple
import regex as re
from ...tokenization_utils import AddedToken, PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"openai/clip-vit-base-patch32": "https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/vocab.json",
},
"merges_file": {
"openai/clip-vit-base-patch32": "https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/merges.txt",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"openai/clip-vit-base-patch32": 77,
}
PRETRAINED_INIT_CONFIGURATION = {
"openai/clip-vit-base-patch32": {},
}
@lru_cache()
def bytes_to_unicode():
"""
Returns list of utf-8 byte and a mapping to unicode strings. We specifically avoids mapping to whitespace/control
characters the bpe code barfs on.
The reversible bpe codes work on unicode strings. This means you need a large # of unicode characters in your vocab
if you want to avoid UNKs. When you're at something like a 10B token dataset you end up needing around 5K for
decent coverage. This is a significant percentage of your normal, say, 32K bpe vocab. To avoid that, we want lookup
tables between utf-8 bytes and unicode strings.
"""
bs = (
list(range(ord("!"), ord("~") + 1)) + list(range(ord("¡"), ord("¬") + 1)) + list(range(ord("®"), ord("ÿ") + 1))
)
cs = bs[:]
n = 0
for b in range(2**8):
if b not in bs:
bs.append(b)
cs.append(2**8 + n)
n += 1
cs = [chr(n) for n in cs]
return dict(zip(bs, cs))
def get_pairs(word):
"""
Return set of symbol pairs in a word.
Word is represented as tuple of symbols (symbols being variable-length strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
def whitespace_clean(text):
text = re.sub(r"\s+", " ", text)
text = text.strip()
return text
# Copied from transformers.models.bert.tokenization_bert.whitespace_tokenize
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
do_split_on_punc (`bool`, *optional*, defaults to `True`):
In some instances we want to skip the basic punctuation splitting so that later tokenization can capture
the full context of the words, such as contractions.
"""
def __init__(
self,
do_lower_case=True,
never_split=None,
tokenize_chinese_chars=True,
strip_accents=None,
do_split_on_punc=True,
):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
self.do_split_on_punc = do_split_on_punc
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. For sub-word tokenization, see WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
# prevents treating the same character with different unicode codepoints as different characters
unicode_normalized_text = unicodedata.normalize("NFC", text)
orig_tokens = whitespace_tokenize(unicode_normalized_text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if not self.do_split_on_punc or (never_split is not None and text in never_split):
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
class CLIPTokenizer(PreTrainedTokenizer):
"""
Construct a CLIP tokenizer. Based on byte-level Byte-Pair-Encoding.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
errors (`str`, *optional*, defaults to `"replace"`):
Paradigm to follow when decoding bytes to UTF-8. See
[bytes.decode](https://docs.python.org/3/library/stdtypes.html#bytes.decode) for more information.
unk_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
bos_token (`str`, *optional*, defaults to `"<|startoftext|>"`):
The beginning of sequence token.
eos_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The end of sequence token.
pad_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The token used for padding, for example when batching sequences of different lengths.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
merges_file,
errors="replace",
unk_token="<|endoftext|>",
bos_token="<|startoftext|>",
eos_token="<|endoftext|>",
pad_token="<|endoftext|>", # hack to enable padding
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
try:
import ftfy
self.fix_text = ftfy.fix_text
except ImportError:
logger.info("ftfy or spacy is not installed using custom BasicTokenizer instead of ftfy.")
self.nlp = BasicTokenizer(strip_accents=False, do_split_on_punc=False)
self.fix_text = None
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
self.errors = errors # how to handle errors in decoding
self.byte_encoder = bytes_to_unicode()
self.byte_decoder = {v: k for k, v in self.byte_encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
bpe_merges = merges_handle.read().strip().split("\n")[1 : 49152 - 256 - 2 + 1]
bpe_merges = [tuple(merge.split()) for merge in bpe_merges]
self.bpe_ranks = dict(zip(bpe_merges, range(len(bpe_merges))))
self.cache = {"<|startoftext|>": "<|startoftext|>", "<|endoftext|>": "<|endoftext|>"}
self.pat = re.compile(
r"""<\|startoftext\|>|<\|endoftext\|>|'s|'t|'re|'ve|'m|'ll|'d|[\p{L}]+|[\p{N}]|[^\s\p{L}\p{N}]+""",
re.IGNORECASE,
)
super().__init__(
errors=errors,
unk_token=unk_token,
bos_token=bos_token,
eos_token=eos_token,
pad_token=pad_token,
**kwargs,
)
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A CLIP sequence has the following format:
- single sequence: `<|startoftext|> X <|endoftext|>`
Pairs of sequences are not the expected use case, but they will be handled without a separator.
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
bos_token = [self.bos_token_id]
eos_token = [self.eos_token_id]
if token_ids_1 is None:
return bos_token + token_ids_0 + eos_token
return bos_token + token_ids_0 + eos_token + eos_token + token_ids_1 + eos_token
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed. CLIP does not make use of token type ids, therefore a list of
zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
bos_token = [self.bos_token_id]
eos_token = [self.eos_token_id]
if token_ids_1 is None:
return len(bos_token + token_ids_0 + eos_token) * [0]
return len(bos_token + token_ids_0 + eos_token + eos_token + token_ids_1 + eos_token) * [0]
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token[:-1]) + (token[-1] + "</w>",)
pairs = get_pairs(word)
if not pairs:
return token + "</w>"
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
bpe_tokens = []
if self.fix_text is None:
text = " ".join(self.nlp.tokenize(text))
else:
text = whitespace_clean(self.fix_text(text)).lower()
for token in re.findall(self.pat, text):
token = "".join(
self.byte_encoder[b] for b in token.encode("utf-8")
) # Maps all our bytes to unicode strings, avoiding control tokens of the BPE (spaces in our case)
bpe_tokens.extend(bpe_token for bpe_token in self.bpe(token).split(" "))
return bpe_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
text = "".join(tokens)
byte_array = bytearray([self.byte_decoder[c] for c in text])
text = byte_array.decode("utf-8", errors=self.errors).replace("</w>", " ").strip()
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error("Vocabulary path ({}) should be a directory".format(save_directory))
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
"Saving vocabulary to {}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!".format(merge_file)
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/tokenization_clip_fast.py | # coding=utf-8
# Copyright 2021 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for OpenAI GPT."""
from typing import List, Optional, Tuple
from tokenizers import pre_tokenizers
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from ...utils import logging
from .tokenization_clip import CLIPTokenizer
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.json", "merges_file": "merges.txt", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"openai/clip-vit-base-patch32": "https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/vocab.json",
},
"merges_file": {
"openai/clip-vit-base-patch32": "https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/merges.txt",
},
"tokenizer_file": {
"openai/clip-vit-base-patch32": (
"https://huggingface.co/openai/clip-vit-base-patch32/resolve/main/tokenizer.json"
),
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"openai/clip-vit-base-patch32": 77,
}
class CLIPTokenizerFast(PreTrainedTokenizerFast):
"""
Construct a "fast" CLIP tokenizer (backed by HuggingFace's *tokenizers* library). Based on byte-level
Byte-Pair-Encoding.
This tokenizer inherits from [`PreTrainedTokenizerFast`] which contains most of the main methods. Users should
refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`, *optional*):
Path to the vocabulary file.
merges_file (`str`, *optional*):
Path to the merges file.
tokenizer_file (`str`, *optional*):
The path to a tokenizer file to use instead of the vocab file.
unk_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
bos_token (`str`, *optional*, defaults to `"<|startoftext|>"`):
The beginning of sequence token.
eos_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The end of sequence token.
pad_token (`str`, *optional*, defaults to `"<|endoftext|>"`):
The token used for padding, for example when batching sequences of different lengths.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
slow_tokenizer_class = CLIPTokenizer
def __init__(
self,
vocab_file=None,
merges_file=None,
tokenizer_file=None,
unk_token="<|endoftext|>",
bos_token="<|startoftext|>",
eos_token="<|endoftext|>",
pad_token="<|endoftext|>", # hack to enable padding
**kwargs,
):
super().__init__(
vocab_file,
merges_file,
tokenizer_file=tokenizer_file,
unk_token=unk_token,
bos_token=bos_token,
eos_token=eos_token,
pad_token=pad_token,
**kwargs,
)
if not isinstance(self.backend_tokenizer.pre_tokenizer, pre_tokenizers.Sequence):
raise ValueError(
"The `backend_tokenizer` provided does not match the expected format. The CLIP tokenizer has been"
" heavily modified from transformers version 4.17.0. You need to convert the tokenizer you are using"
" to be compatible with this version.The easiest way to do so is"
' `CLIPTokenizerFast.from_pretrained("path_to_local_folder_or_hub_repo, from_slow=True)`. If you want'
" to use your existing tokenizer, you will have to revert to a version prior to 4.17.0 of"
" transformers."
)
self._wrap_decode_method_backend_tokenizer()
# Very ugly hack to enable padding to have a correct decoding see https://github.com/huggingface/tokenizers/issues/872
def _wrap_decode_method_backend_tokenizer(self):
orig_decode_method = self.backend_tokenizer.decode
def new_decode_method(*args, **kwargs):
text = orig_decode_method(*args, **kwargs)
text = text.replace(self.backend_tokenizer.model.end_of_word_suffix, " ").strip()
return text
self.backend_tokenizer.decode = new_decode_method
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A CLIP sequence has the following format:
- single sequence: `<|startoftext|> X <|endoftext|>`
Pairs of sequences are not the expected use case, but they will be handled without a separator.
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
bos_token = [self.bos_token_id]
eos_token = [self.eos_token_id]
if token_ids_1 is None:
return bos_token + token_ids_0 + eos_token
return bos_token + token_ids_0 + eos_token + eos_token + token_ids_1 + eos_token
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed. CLIP does not make use of token type ids, therefore a list of
zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
bos_token = [self.bos_token_id]
eos_token = [self.eos_token_id]
if token_ids_1 is None:
return len(bos_token + token_ids_0 + eos_token) * [0]
return len(bos_token + token_ids_0 + eos_token + eos_token + token_ids_1 + eos_token) * [0]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
files = self._tokenizer.model.save(save_directory, name=filename_prefix)
return tuple(files)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/clip/feature_extraction_clip.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Feature extractor class for CLIP."""
import warnings
from ...utils import logging
from .image_processing_clip import CLIPImageProcessor
logger = logging.get_logger(__name__)
class CLIPFeatureExtractor(CLIPImageProcessor):
def __init__(self, *args, **kwargs) -> None:
warnings.warn(
"The class CLIPFeatureExtractor is deprecated and will be removed in version 5 of Transformers. Please"
" use CLIPImageProcessor instead.",
FutureWarning,
)
super().__init__(*args, **kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/ctrl/tokenization_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for Salesforce CTRL."""
import json
import os
from typing import Optional, Tuple
import regex as re
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {"ctrl": "https://raw.githubusercontent.com/salesforce/ctrl/master/ctrl-vocab.json"},
"merges_file": {"ctrl": "https://raw.githubusercontent.com/salesforce/ctrl/master/ctrl-merges.txt"},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"ctrl": 256,
}
CONTROL_CODES = {
"Pregnancy": 168629,
"Christianity": 7675,
"Explain": 106423,
"Fitness": 63440,
"Saving": 63163,
"Ask": 27171,
"Ass": 95985,
"Joke": 163509,
"Questions": 45622,
"Thoughts": 49605,
"Retail": 52342,
"Feminism": 164338,
"Writing": 11992,
"Atheism": 192263,
"Netflix": 48616,
"Computing": 39639,
"Opinion": 43213,
"Alone": 44967,
"Funny": 58917,
"Gaming": 40358,
"Human": 4088,
"India": 1331,
"Joker": 77138,
"Diet": 36206,
"Legal": 11859,
"Norman": 4939,
"Tip": 72689,
"Weight": 52343,
"Movies": 46273,
"Running": 23425,
"Science": 2090,
"Horror": 37793,
"Confession": 60572,
"Finance": 12250,
"Politics": 16360,
"Scary": 191985,
"Support": 12654,
"Technologies": 32516,
"Teenage": 66160,
"Event": 32769,
"Learned": 67460,
"Notion": 182770,
"Wikipedia": 37583,
"Books": 6665,
"Extract": 76050,
"Confessions": 102701,
"Conspiracy": 75932,
"Links": 63674,
"Narcissus": 150425,
"Relationship": 54766,
"Relationships": 134796,
"Reviews": 41671,
"News": 4256,
"Translation": 26820,
"multilingual": 128406,
}
def get_pairs(word):
"""
Return set of symbol pairs in a word.
Word is represented as tuple of symbols (symbols being variable-length strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
pairs = set(pairs)
return pairs
class CTRLTokenizer(PreTrainedTokenizer):
"""
Construct a CTRL tokenizer. Based on Byte-Pair-Encoding.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
control_codes = CONTROL_CODES
def __init__(self, vocab_file, merges_file, unk_token="<unk>", **kwargs):
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[1:-1]
merges = [tuple(merge.split()) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
super().__init__(unk_token=unk_token, **kwargs)
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
word = tuple(list(word[:-1]) + [word[-1] + "</w>"])
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = "@@ ".join(word)
word = word[:-4]
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
split_tokens = []
words = re.findall(r"\S+\n?", text)
for token in words:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace("@@ ", "").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
# def decode(self, token_ids, skip_special_tokens=False, clean_up_tokenization_spaces=True):
# filtered_tokens = ' '.join(self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens))
# tokens_generated_so_far = re.sub('(@@ )', '', string=filtered_tokens)
# tokens_generated_so_far = re.sub('(@@ ?$)', '', string=tokens_generated_so_far)
# return ''.join(tokens_generated_so_far)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/ctrl/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_ctrl": ["CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP", "CTRLConfig"],
"tokenization_ctrl": ["CTRLTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_ctrl"] = [
"CTRL_PRETRAINED_MODEL_ARCHIVE_LIST",
"CTRLForSequenceClassification",
"CTRLLMHeadModel",
"CTRLModel",
"CTRLPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_ctrl"] = [
"TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFCTRLForSequenceClassification",
"TFCTRLLMHeadModel",
"TFCTRLModel",
"TFCTRLPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_ctrl import CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP, CTRLConfig
from .tokenization_ctrl import CTRLTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_ctrl import (
CTRL_PRETRAINED_MODEL_ARCHIVE_LIST,
CTRLForSequenceClassification,
CTRLLMHeadModel,
CTRLModel,
CTRLPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_ctrl import (
TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST,
TFCTRLForSequenceClassification,
TFCTRLLMHeadModel,
TFCTRLModel,
TFCTRLPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/ctrl/modeling_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch CTRL model."""
from typing import Optional, Tuple, Union
import numpy as np
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...modeling_outputs import BaseModelOutputWithPast, CausalLMOutputWithPast, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import Conv1D, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_ctrl import CTRLConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "CTRLConfig"
CTRL_PRETRAINED_MODEL_ARCHIVE_LIST = [
"Salesforce/ctrl"
# See all CTRL models at https://huggingface.co/models?filter=ctrl
]
def angle_defn(pos, i, d_model_size):
angle_rates = 1 / torch.pow(10000, (2 * (i // 2)) / d_model_size)
return pos * angle_rates
def positional_encoding(position, d_model_size, dtype):
# create the sinusoidal pattern for the positional encoding
angle_rads = angle_defn(
torch.arange(position, dtype=dtype).unsqueeze(1),
torch.arange(d_model_size, dtype=dtype).unsqueeze(0),
d_model_size,
)
sines = torch.sin(angle_rads[:, 0::2])
cosines = torch.cos(angle_rads[:, 1::2])
pos_encoding = torch.cat([sines, cosines], dim=-1)
return pos_encoding
def scaled_dot_product_attention(q, k, v, mask, attention_mask=None, head_mask=None):
# calculate attention
matmul_qk = torch.matmul(q, k.permute(0, 1, 3, 2))
dk = k.shape[-1]
scaled_attention_logits = matmul_qk / np.sqrt(dk)
if mask is not None:
nd, ns = scaled_attention_logits.size(-2), scaled_attention_logits.size(-1)
scaled_attention_logits += mask[ns - nd : ns, :ns] * -1e4
if attention_mask is not None:
# Apply the attention mask
scaled_attention_logits = scaled_attention_logits + attention_mask
attention_weights = torch.softmax(scaled_attention_logits, dim=-1)
# Mask heads if we want to
if head_mask is not None:
attention_weights = attention_weights * head_mask
output = torch.matmul(attention_weights, v)
return output, attention_weights
class MultiHeadAttention(nn.Module):
def __init__(self, d_model_size, num_heads):
super().__init__()
self.num_heads = num_heads
self.d_model_size = d_model_size
self.depth = int(d_model_size / self.num_heads)
self.Wq = nn.Linear(d_model_size, d_model_size)
self.Wk = nn.Linear(d_model_size, d_model_size)
self.Wv = nn.Linear(d_model_size, d_model_size)
self.dense = nn.Linear(d_model_size, d_model_size)
self.pruned_heads = set()
def prune_heads(self, heads):
attention_head_size = self.d_model_size // self.num_heads
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(heads, self.num_heads, attention_head_size, self.pruned_heads)
# Prune linear layers
self.Wq = prune_linear_layer(self.Wq, index)
self.Wk = prune_linear_layer(self.Wk, index)
self.Wv = prune_linear_layer(self.Wv, index)
self.dense = prune_linear_layer(self.dense, index, dim=1)
# Update hyper params
self.num_heads = self.num_heads - len(heads)
self.d_model_size = attention_head_size * self.num_heads
self.pruned_heads = self.pruned_heads.union(heads)
def split_into_heads(self, x, batch_size):
x = x.reshape(batch_size, -1, self.num_heads, self.depth)
return x.permute([0, 2, 1, 3])
def forward(
self,
v,
k,
q,
mask,
layer_past=None,
attention_mask=None,
head_mask=None,
use_cache=False,
output_attentions=False,
):
batch_size = q.shape[0]
q = self.Wq(q)
k = self.Wk(k)
v = self.Wv(v)
q = self.split_into_heads(q, batch_size)
k = self.split_into_heads(k, batch_size)
v = self.split_into_heads(v, batch_size)
if layer_past is not None:
past_key, past_value = layer_past[0], layer_past[1]
k = torch.cat((past_key, k), dim=-2)
v = torch.cat((past_value, v), dim=-2)
if use_cache is True:
present = torch.stack((k, v))
else:
present = (None,)
output = scaled_dot_product_attention(q, k, v, mask, attention_mask, head_mask)
scaled_attention = output[0].permute([0, 2, 1, 3])
attn = output[1]
original_size_attention = scaled_attention.reshape(batch_size, -1, self.d_model_size)
output = self.dense(original_size_attention)
outputs = (output, present)
if output_attentions:
outputs = outputs + (attn,)
return outputs
def point_wise_feed_forward_network(d_model_size, dff):
return nn.Sequential(nn.Linear(d_model_size, dff), nn.ReLU(), nn.Linear(dff, d_model_size))
class EncoderLayer(nn.Module):
def __init__(self, d_model_size, num_heads, dff, rate=0.1):
super().__init__()
self.multi_head_attention = MultiHeadAttention(d_model_size, num_heads)
self.ffn = point_wise_feed_forward_network(d_model_size, dff)
self.layernorm1 = nn.LayerNorm(d_model_size, eps=1e-6)
self.layernorm2 = nn.LayerNorm(d_model_size, eps=1e-6)
self.dropout1 = nn.Dropout(rate)
self.dropout2 = nn.Dropout(rate)
def forward(
self, x, mask, layer_past=None, attention_mask=None, head_mask=None, use_cache=False, output_attentions=False
):
normed = self.layernorm1(x)
attn_outputs = self.multi_head_attention(
normed,
normed,
normed,
mask,
layer_past=layer_past,
attention_mask=attention_mask,
head_mask=head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
)
attn_output = attn_outputs[0]
attn_output = self.dropout1(attn_output)
out1 = x + attn_output
out2 = self.layernorm2(out1)
ffn_output = self.ffn(out2)
ffn_output = self.dropout2(ffn_output)
out2 = out1 + ffn_output
outputs = (out2,) + attn_outputs[1:]
return outputs
class CTRLPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CTRLConfig
base_model_prefix = "transformer"
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, (nn.Linear, Conv1D)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
CTRL_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`CTRLConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CTRL_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
`input_ids_length` = `sequence_length` if `past_key_values` is `None` else `past_key_values[0].shape[-2]`
(`sequence_length` of input past key value states). Indices of input sequence tokens in the vocabulary.
If `past_key_values` is used, only input IDs that do not have their past calculated should be passed as
`input_ids`.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
past_key_values (`Tuple[Tuple[torch.FloatTensor]]` of length `config.n_layers`):
Contains pre-computed hidden-states (key and values in the attention blocks) as computed by the model (see
`past_key_values` output below). Can be used to speed up sequential decoding. The `input_ids` which have
their past given to this model should not be passed as input ids as they have already been computed.
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare CTRL Model transformer outputting raw hidden-states without any specific head on top.",
CTRL_START_DOCSTRING,
)
class CTRLModel(CTRLPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.d_model_size = config.n_embd
self.num_layers = config.n_layer
self.pos_encoding = positional_encoding(config.n_positions, self.d_model_size, torch.float)
self.w = nn.Embedding(config.vocab_size, config.n_embd)
self.dropout = nn.Dropout(config.embd_pdrop)
self.h = nn.ModuleList(
[EncoderLayer(config.n_embd, config.n_head, config.dff, config.resid_pdrop) for _ in range(config.n_layer)]
)
self.layernorm = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.w
def set_input_embeddings(self, new_embeddings):
self.w = new_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
for layer, heads in heads_to_prune.items():
self.h[layer].multi_head_attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPast, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPast]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, CTRLModel
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("Salesforce/ctrl")
>>> model = CTRLModel.from_pretrained("Salesforce/ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 5, 1280]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
batch_size = input_ids.shape[0]
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
batch_size = inputs_embeds.shape[0]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if past_key_values is None:
past_length = 0
past_key_values = tuple([None] * len(self.h))
else:
past_length = past_key_values[0][0].size(-2)
if position_ids is None:
position_ids = torch.arange(past_length, input_shape[-1] + past_length, dtype=torch.long, device=device)
position_ids = position_ids.unsqueeze(0)
# Attention mask.
if attention_mask is not None:
if batch_size <= 0:
raise ValueError("batch_size has to be defined and > 0")
attention_mask = attention_mask.view(batch_size, -1)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and the dtype's smallest value for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
attention_mask = attention_mask.to(dtype=self.dtype) # fp16 compatibility
attention_mask = (1.0 - attention_mask) * torch.finfo(self.dtype).min
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.n_layer)
if token_type_ids is not None:
token_type_ids = token_type_ids.view(-1, input_shape[-1])
token_type_embeds = self.w(token_type_ids)
token_type_embeds *= np.sqrt(self.d_model_size)
else:
token_type_embeds = 0
if inputs_embeds is None:
inputs_embeds = self.w(input_ids)
# inputs_embeds = embedded.unsqueeze(0) if len(input_ids.shape)<2 else embedded
seq_len = input_shape[-1]
mask = torch.triu(torch.ones(seq_len + past_length, seq_len + past_length), 1).to(device)
inputs_embeds *= np.sqrt(self.d_model_size)
# `self.pos_encoding` won't be sent to the correct device along the model, so we do it manually.
self.pos_encoding = self.pos_encoding.to(device)
pos_embeds = self.pos_encoding[position_ids, :]
hidden_states = inputs_embeds + pos_embeds + token_type_embeds
hidden_states = self.dropout(hidden_states)
presents = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, (h, layer_past) in enumerate(zip(self.h, past_key_values)):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
outputs = h(
hidden_states,
mask,
layer_past=layer_past,
attention_mask=attention_mask,
head_mask=head_mask[i],
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states, present = outputs[:2]
if use_cache is True:
presents = presents + (present,)
if output_attentions:
all_attentions += (outputs[2],)
hidden_states = self.layernorm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, presents, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=presents,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
@add_start_docstrings(
"""
The CTRL Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
CTRL_START_DOCSTRING,
)
class CTRLLMHeadModel(CTRLPreTrainedModel):
_tied_weights_keys = ["lm_head.weight"]
def __init__(self, config):
super().__init__(config)
self.transformer = CTRLModel(config)
self.lm_head = nn.Linear(config.n_embd, config.vocab_size, bias=True)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, use_cache=None, **kwargs):
# only last tokens for inputs_ids if past is defined in kwargs
if past_key_values is not None:
past_length = past_key_values[0][0].shape[2]
# Some generation methods already pass only the last input ID
if input_ids.shape[1] > past_length:
remove_prefix_length = past_length
else:
# Default to old behavior: keep only final ID
remove_prefix_length = input_ids.shape[1] - 1
input_ids = input_ids[:, remove_prefix_length:]
return {"input_ids": input_ids, "past_key_values": past_key_values, "use_cache": use_cache}
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=CausalLMOutputWithPast, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], CausalLMOutputWithPast]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for language modeling. Note that the labels **are shifted** inside the model, i.e. you can set
`labels = input_ids` Indices are selected in `[-100, 0, ..., config.vocab_size]` All labels set to `-100`
are ignored (masked), the loss is only computed for labels in `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLLMHeadModel
>>> tokenizer = AutoTokenizer.from_pretrained("Salesforce/ctrl")
>>> model = CTRLLMHeadModel.from_pretrained("Salesforce/ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Wikipedia The llama is", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> sequence_ids = model.generate(inputs["input_ids"])
>>> sequences = tokenizer.batch_decode(sequence_ids)
>>> sequences
['Wikipedia The llama is a member of the family Bovidae. It is native to the Andes of Peru,']
>>> outputs = model(**inputs, labels=inputs["input_ids"])
>>> round(outputs.loss.item(), 2)
9.21
>>> list(outputs.logits.shape)
[1, 5, 246534]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
lm_logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
# Shift so that tokens < n predict n
shift_logits = lm_logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous()
# Flatten the tokens
loss_fct = CrossEntropyLoss()
loss = loss_fct(shift_logits.view(-1, shift_logits.size(-1)), shift_labels.view(-1))
if not return_dict:
output = (lm_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutputWithPast(
loss=loss,
logits=lm_logits,
past_key_values=transformer_outputs.past_key_values,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@staticmethod
def _reorder_cache(
past_key_values: Tuple[Tuple[torch.Tensor]], beam_idx: torch.Tensor
) -> Tuple[Tuple[torch.Tensor]]:
"""
This function is used to re-order the `past_key_values` cache if [`~PreTrainedModel.beam_search`] or
[`~PreTrainedModel.beam_sample`] is called. This is required to match `past_key_values` with the correct
beam_idx at every generation step.
"""
return tuple(
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past)
for layer_past in past_key_values
)
@add_start_docstrings(
"""
The CTRL Model transformer with a sequence classification head on top (linear layer).
[`CTRLForSequenceClassification`] uses the last token in order to do the classification, as other causal models
(e.g. GPT-2) do. Since it does classification on the last token, it requires to know the position of the last
token. If a `pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in
each row. If no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot
guess the padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last
value in each row of the batch).
""",
CTRL_START_DOCSTRING,
)
class CTRLForSequenceClassification(CTRLPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.transformer = CTRLModel(config)
self.classifier = nn.Linear(config.n_embd, self.num_labels, bias=False)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Example of single-label classification:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLForSequenceClassification
>>> tokenizer = AutoTokenizer.from_pretrained("Salesforce/ctrl")
>>> model = CTRLForSequenceClassification.from_pretrained("Salesforce/ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> import torch
>>> torch.manual_seed(42) # doctest: +IGNORE_RESULT
>>> # To train a model on `num_labels` classes, you can pass `num_labels=num_labels` to `.from_pretrained(...)`
>>> num_labels = len(model.config.id2label)
>>> model = CTRLForSequenceClassification.from_pretrained("Salesforce/ctrl", num_labels=num_labels)
>>> labels = torch.tensor(1)
>>> loss = model(**inputs, labels=labels).loss
>>> round(loss.item(), 2)
0.35
```
Example of multi-label classification:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLForSequenceClassification
>>> tokenizer = AutoTokenizer.from_pretrained("Salesforce/ctrl")
>>> model = CTRLForSequenceClassification.from_pretrained(
... "Salesforce/ctrl", problem_type="multi_label_classification"
... )
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> # To train a model on `num_labels` classes, you can pass `num_labels=num_labels` to `.from_pretrained(...)`
>>> num_labels = len(model.config.id2label)
>>> model = CTRLForSequenceClassification.from_pretrained("Salesforce/ctrl", num_labels=num_labels)
>>> num_labels = len(model.config.id2label)
>>> labels = torch.nn.functional.one_hot(torch.tensor([predicted_class_id]), num_classes=num_labels).to(
... torch.float
... )
>>> loss = model(**inputs, labels=labels).loss
>>> loss.backward() # doctest: +IGNORE_RESULT
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
logits = self.classifier(hidden_states)
if input_ids is not None:
batch_size, sequence_length = input_ids.shape[:2]
else:
batch_size, sequence_length = inputs_embeds.shape[:2]
if self.config.pad_token_id is None and batch_size != 1:
raise ValueError("Cannot handle batch sizes > 1 if no padding token is defined.")
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = (torch.eq(input_ids, self.config.pad_token_id).int().argmax(-1) - 1).to(
logits.device
)
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
pooled_logits = logits[range(batch_size), sequence_lengths]
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(pooled_logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(pooled_logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(pooled_logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(pooled_logits, labels)
if not return_dict:
output = (pooled_logits,) + transformer_outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/ctrl/configuration_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Salesforce CTRL configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"Salesforce/ctrl": "https://huggingface.co/Salesforce/ctrl/resolve/main/config.json"
}
class CTRLConfig(PretrainedConfig):
"""
This is the configuration class to store the configuration of a [`CTRLModel`] or a [`TFCTRLModel`]. It is used to
instantiate a CTRL model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the
[Salesforce/ctrl](https://huggingface.co/Salesforce/ctrl) architecture from SalesForce.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 246534):
Vocabulary size of the CTRL model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`CTRLModel`] or [`TFCTRLModel`].
n_positions (`int`, *optional*, defaults to 256):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
n_embd (`int`, *optional*, defaults to 1280):
Dimensionality of the embeddings and hidden states.
dff (`int`, *optional*, defaults to 8192):
Dimensionality of the inner dimension of the feed forward networks (FFN).
n_layer (`int`, *optional*, defaults to 48):
Number of hidden layers in the Transformer encoder.
n_head (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
resid_pdrop (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
embd_pdrop (`int`, *optional*, defaults to 0.1):
The dropout ratio for the embeddings.
layer_norm_epsilon (`float`, *optional*, defaults to 1e-06):
The epsilon to use in the layer normalization layers
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
Examples:
```python
>>> from transformers import CTRLConfig, CTRLModel
>>> # Initializing a CTRL configuration
>>> configuration = CTRLConfig()
>>> # Initializing a model (with random weights) from the configuration
>>> model = CTRLModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "ctrl"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {
"max_position_embeddings": "n_positions",
"hidden_size": "n_embd",
"num_attention_heads": "n_head",
"num_hidden_layers": "n_layer",
}
def __init__(
self,
vocab_size=246534,
n_positions=256,
n_embd=1280,
dff=8192,
n_layer=48,
n_head=16,
resid_pdrop=0.1,
embd_pdrop=0.1,
layer_norm_epsilon=1e-6,
initializer_range=0.02,
use_cache=True,
**kwargs,
):
self.vocab_size = vocab_size
self.n_positions = n_positions
self.n_embd = n_embd
self.n_layer = n_layer
self.n_head = n_head
self.dff = dff
self.resid_pdrop = resid_pdrop
self.embd_pdrop = embd_pdrop
self.layer_norm_epsilon = layer_norm_epsilon
self.initializer_range = initializer_range
self.use_cache = use_cache
super().__init__(**kwargs)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/ctrl/modeling_tf_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 CTRL model."""
from __future__ import annotations
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...modeling_tf_outputs import TFBaseModelOutputWithPast, TFCausalLMOutputWithPast, TFSequenceClassifierOutput
from ...modeling_tf_utils import (
TFCausalLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_ctrl import CTRLConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "Salesforce/ctrl"
_CONFIG_FOR_DOC = "CTRLConfig"
TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST = [
"Salesforce/ctrl"
# See all CTRL models at https://huggingface.co/models?filter=ctrl
]
def angle_defn(pos, i, d_model_size):
angle_rates = 1 / np.power(10000, (2 * (i // 2)) / d_model_size)
return pos * angle_rates
def positional_encoding(position, d_model_size):
# create the sinusoidal pattern for the positional encoding
angle_rads = angle_defn(np.arange(position)[:, np.newaxis], np.arange(d_model_size)[np.newaxis, :], d_model_size)
sines = np.sin(angle_rads[:, 0::2])
cosines = np.cos(angle_rads[:, 1::2])
pos_encoding = tf.convert_to_tensor(np.concatenate([sines, cosines], axis=-1))
return pos_encoding
def scaled_dot_product_attention(q, k, v, mask, attention_mask=None, head_mask=None):
# calculate attention
matmul_qk = tf.matmul(q, k, transpose_b=True)
dk = tf.cast(shape_list(k)[-1], dtype=matmul_qk.dtype)
scaled_attention_logits = matmul_qk / tf.math.sqrt(dk)
if mask is not None:
scaled_attention_logits += tf.cast(mask * -1e4, dtype=scaled_attention_logits.dtype)
if attention_mask is not None:
# Apply the attention mask
attention_mask = tf.cast(attention_mask, dtype=scaled_attention_logits.dtype)
scaled_attention_logits = scaled_attention_logits + attention_mask
attention_weights = stable_softmax(scaled_attention_logits, axis=-1)
# Mask heads if we want to
if head_mask is not None:
attention_weights = attention_weights * head_mask
output = tf.matmul(attention_weights, v)
return output, attention_weights
class TFMultiHeadAttention(tf.keras.layers.Layer):
def __init__(self, d_model_size, num_heads, output_attentions=False, **kwargs):
super().__init__(**kwargs)
self.num_heads = num_heads
self.d_model_size = d_model_size
self.output_attentions = output_attentions
self.depth = int(d_model_size / self.num_heads)
self.Wq = tf.keras.layers.Dense(d_model_size, name="Wq")
self.Wk = tf.keras.layers.Dense(d_model_size, name="Wk")
self.Wv = tf.keras.layers.Dense(d_model_size, name="Wv")
self.dense = tf.keras.layers.Dense(d_model_size, name="dense")
def split_into_heads(self, x, batch_size):
x = tf.reshape(x, (batch_size, -1, self.num_heads, self.depth))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(self, v, k, q, mask, layer_past, attention_mask, head_mask, use_cache, output_attentions, training=False):
batch_size = shape_list(q)[0]
q = self.Wq(q)
k = self.Wk(k)
v = self.Wv(v)
q = self.split_into_heads(q, batch_size)
k = self.split_into_heads(k, batch_size)
v = self.split_into_heads(v, batch_size)
if layer_past is not None:
past_key, past_value = tf.unstack(layer_past, axis=0)
k = tf.concat((past_key, k), axis=-2)
v = tf.concat((past_value, v), axis=-2)
if use_cache:
present = tf.stack((k, v), axis=0)
else:
present = (None,)
output = scaled_dot_product_attention(q, k, v, mask, attention_mask, head_mask)
scaled_attention = tf.transpose(output[0], perm=[0, 2, 1, 3])
attn = output[1]
original_size_attention = tf.reshape(scaled_attention, (batch_size, -1, self.d_model_size))
output = self.dense(original_size_attention)
outputs = (output, present)
if output_attentions:
outputs = outputs + (attn,)
return outputs
class TFPointWiseFeedForwardLayer(tf.keras.layers.Layer):
def __init__(self, d_model_size, dff, **kwargs):
super().__init__(**kwargs)
self.dense_0 = tf.keras.layers.Dense(dff, activation="relu", name="0")
self.dense_2 = tf.keras.layers.Dense(d_model_size, name="2")
def call(self, inputs, trainable=False):
dense_0_output = self.dense_0(inputs)
dense_2_output = self.dense_2(dense_0_output)
return dense_2_output
class TFEncoderLayer(tf.keras.layers.Layer):
def __init__(
self, d_model_size, num_heads, dff, rate=0.1, layer_norm_epsilon=1e-6, output_attentions=False, **kwargs
):
super().__init__(**kwargs)
self.output_attentions = output_attentions
self.multi_head_attention = TFMultiHeadAttention(
d_model_size, num_heads, output_attentions=self.output_attentions, name="multi_head_attention"
)
self.ffn = TFPointWiseFeedForwardLayer(d_model_size, dff, name="ffn")
self.layernorm1 = tf.keras.layers.LayerNormalization(epsilon=layer_norm_epsilon, name="layernorm1")
self.layernorm2 = tf.keras.layers.LayerNormalization(epsilon=layer_norm_epsilon, name="layernorm2")
self.dropout1 = tf.keras.layers.Dropout(rate)
self.dropout2 = tf.keras.layers.Dropout(rate)
def call(self, x, mask, layer_past, attention_mask, head_mask, use_cache, output_attentions, training=False):
normed = self.layernorm1(x)
attn_outputs = self.multi_head_attention(
normed,
normed,
normed,
mask,
layer_past,
attention_mask,
head_mask,
use_cache,
output_attentions,
training=training,
)
attn_output = attn_outputs[0]
attn_output = self.dropout1(attn_output, training=training)
out1 = x + attn_output
out2 = self.layernorm2(out1)
ffn_output = self.ffn(out2)
ffn_output = self.dropout2(ffn_output, training=training)
out2 = out1 + ffn_output
outputs = (out2,) + attn_outputs[1:]
return outputs
@keras_serializable
class TFCTRLMainLayer(tf.keras.layers.Layer):
config_class = CTRLConfig
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.output_hidden_states = config.output_hidden_states
self.output_attentions = config.output_attentions
self.use_cache = config.use_cache
self.return_dict = config.use_return_dict
self.d_model_size = config.n_embd
self.num_layers = config.n_layer
self.pos_encoding = positional_encoding(config.n_positions, self.d_model_size)
self.w = tf.keras.layers.Embedding(
input_dim=config.vocab_size,
output_dim=config.n_embd,
embeddings_initializer=get_initializer(config.initializer_range),
name="w",
)
self.dropout = tf.keras.layers.Dropout(config.embd_pdrop)
self.h = [
TFEncoderLayer(
config.n_embd,
config.n_head,
config.dff,
config.resid_pdrop,
config.layer_norm_epsilon,
self.output_attentions,
name=f"h_._{i}",
)
for i in range(config.n_layer)
]
self.layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_epsilon, name="layernorm")
def get_input_embeddings(self):
return self.w
def set_input_embeddings(self, new_embeddings):
self.w = new_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPast]:
# If using past key value states, only the last tokens
# should be given as an input
if past_key_values is not None:
if input_ids is not None:
input_ids = input_ids[:, -1:]
if inputs_embeds is not None:
inputs_embeds = inputs_embeds[:, -1:]
if token_type_ids is not None:
token_type_ids = token_type_ids[:, -1:]
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
input_ids = tf.reshape(input_ids, [-1, input_shape[-1]])
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if past_key_values is None:
past_length = 0
past_key_values = [None] * len(self.h)
else:
past_length = shape_list(past_key_values[0][0])[-2]
if position_ids is None:
position_ids = tf.expand_dims(tf.range(past_length, input_shape[-1] + past_length, dtype=tf.int32), axis=0)
position_ids = tf.tile(position_ids, [input_shape[0], 1])
# Attention mask.
if attention_mask is not None:
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1] + past_length))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
one_cst = tf.constant(1.0)
ten_thousand_cst = tf.constant(-10000.0)
attention_mask = tf.cast(attention_mask, dtype=one_cst.dtype)
attention_mask = tf.multiply(tf.subtract(one_cst, attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# head_mask has shape n_layer x batch x n_heads x N x N
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_layers
if token_type_ids is not None:
token_type_ids = tf.reshape(token_type_ids, [-1, shape_list(token_type_ids)[-1]])
token_type_embeds = self.w(token_type_ids)
token_type_embeds *= tf.math.sqrt(tf.cast(self.d_model_size, dtype=token_type_embeds.dtype))
else:
token_type_embeds = tf.constant(0.0)
position_ids = tf.reshape(position_ids, [-1, shape_list(position_ids)[-1]])
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.w.input_dim)
inputs_embeds = self.w(input_ids)
seq_len = input_shape[-1]
mask = 1 - tf.linalg.band_part(tf.ones((seq_len, seq_len)), -1, 0)
inputs_embeds *= tf.math.sqrt(tf.cast(self.d_model_size, inputs_embeds.dtype))
pos_embeds = tf.gather(self.pos_encoding, position_ids)
pos_embeds = tf.cast(pos_embeds, dtype=token_type_embeds.dtype)
hidden_states = inputs_embeds + pos_embeds + token_type_embeds
hidden_states = self.dropout(hidden_states, training=training)
output_shape = input_shape + [shape_list(hidden_states)[-1]]
presents = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, (h, layer_past) in enumerate(zip(self.h, past_key_values)):
if output_hidden_states:
all_hidden_states = all_hidden_states + (tf.reshape(hidden_states, output_shape),)
outputs = h(
hidden_states,
mask,
layer_past,
attention_mask,
head_mask[i],
use_cache,
output_attentions,
training=training,
)
hidden_states, present = outputs[:2]
if use_cache:
presents = presents + (present,)
if output_attentions:
all_attentions = all_attentions + (outputs[2],)
hidden_states = self.layernorm(hidden_states)
hidden_states = tf.reshape(hidden_states, output_shape)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if output_attentions:
# let the number of heads free (-1) so we can extract attention even after head pruning
attention_output_shape = input_shape[:-1] + [-1] + shape_list(all_attentions[0])[-2:]
all_attentions = tuple(tf.reshape(t, attention_output_shape) for t in all_attentions)
if not return_dict:
return tuple(v for v in [hidden_states, presents, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=presents,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
class TFCTRLPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CTRLConfig
base_model_prefix = "transformer"
CTRL_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`CTRLConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CTRL_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `(batch_size, input_ids_length)`):
`input_ids_length` = `sequence_length` if `past` is `None` else `past[0].shape[-2]` (`sequence_length` of
input past key value states).
Indices of input sequence tokens in the vocabulary.
If `past` is used, only input IDs that do not have their past calculated should be passed as `input_ids`.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
past (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states (key and values in the attention blocks) as computed by the model (see
`past` output below). Can be used to speed up sequential decoding. The token ids which have their past
given to this model should not be passed as input ids as they have already been computed.
attention_mask (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past` key value states are returned and can be used to speed up decoding (see `past`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare CTRL Model transformer outputting raw hidden-states without any specific head on top.",
CTRL_START_DOCSTRING,
)
class TFCTRLModel(TFCTRLPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFCTRLMainLayer(config, name="transformer")
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPast]:
outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
class TFCTRLBiasLayer(tf.keras.layers.Layer):
"""
Bias as a layer. It is used for serialization purposes: `tf.keras.Model.save_weights` stores on a per-layer basis,
so all weights have to be registered in a layer.
"""
def __init__(self, shape, initializer, trainable, name, **kwargs):
super().__init__(name=name, **kwargs)
self.shape = shape
self.initializer = initializer
self.trainable = trainable
def build(self, input_shape):
self.bias = self.add_weight(
name="bias", shape=self.shape, initializer=self.initializer, trainable=self.trainable
)
super().build(input_shape)
def call(self, x):
return x + self.bias
@add_start_docstrings(
"""
The CTRL Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
CTRL_START_DOCSTRING,
)
class TFCTRLLMHeadModel(TFCTRLPreTrainedModel, TFCausalLanguageModelingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFCTRLMainLayer(config, name="transformer")
self.bias_layer = TFCTRLBiasLayer(
name="lm_head", shape=[1, config.vocab_size], initializer="zeros", trainable=True
)
def get_output_embeddings(self):
return self.get_input_embeddings()
def set_output_embeddings(self, value):
self.set_input_embeddings(value)
def get_bias(self):
return {"lm_head.bias": self.bias_layer.bias}
def set_bias(self, value):
# Replaces the existing layers containing bias for correct (de)serialization.
vocab_size = value["lm_head.bias"].shape[-1]
self.bias_layer = TFCTRLBiasLayer(
name="final_logits_bias", shape=[1, vocab_size], initializer="zeros", trainable=True
)
self.bias_layer.build(None)
self.bias_layer.bias.assign(value["lm_head.bias"])
# Copied from transformers.models.gpt2.modeling_tf_gpt2.TFGPT2LMHeadModel.prepare_inputs_for_generation
def prepare_inputs_for_generation(self, inputs, past_key_values=None, use_cache=None, **kwargs):
token_type_ids = kwargs.get("token_type_ids", None)
# only last token for inputs_ids if past is defined in kwargs
if past_key_values:
inputs = tf.expand_dims(inputs[:, -1], -1)
if token_type_ids is not None:
token_type_ids = tf.expand_dims(token_type_ids[:, -1], -1)
position_ids = kwargs.get("position_ids", None)
attention_mask = kwargs.get("attention_mask", None)
if attention_mask is not None and position_ids is None:
position_ids = tf.math.cumsum(attention_mask, axis=-1, exclusive=True)
if past_key_values:
position_ids = tf.expand_dims(position_ids[:, -1], -1)
return {
"input_ids": inputs,
"attention_mask": attention_mask,
"position_ids": position_ids,
"past_key_values": past_key_values,
"use_cache": use_cache,
"token_type_ids": token_type_ids,
}
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFCausalLMOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFCausalLMOutputWithPast]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = tf.matmul(hidden_states, self.transformer.w.weights, transpose_b=True)
logits = self.bias_layer(logits)
loss = None
if labels is not None:
# shift labels to the left and cut last logit token
shifted_logits = logits[:, :-1]
labels = labels[:, 1:]
loss = self.hf_compute_loss(labels, shifted_logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFCausalLMOutputWithPast(
loss=loss,
logits=logits,
past_key_values=transformer_outputs.past_key_values,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@add_start_docstrings(
"""
The CTRL Model transformer with a sequence classification head on top (linear layer).
[`TFCTRLForSequenceClassification`] uses the last token in order to do the classification, as other causal models
(e.g. GPT-1, GPT-2) do.
Since it does classification on the last token, it requires to know the position of the last token. If a
`pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in each row. If
no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot guess the
padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last value in
each row of the batch).
""",
CTRL_START_DOCSTRING,
)
class TFCTRLForSequenceClassification(TFCTRLPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.classifier = tf.keras.layers.Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="classifier",
use_bias=False,
)
self.transformer = TFCTRLMainLayer(config, name="transformer")
def get_output_embeddings(self):
# Remove after transformers v4.32. Fix this model's `test_model_common_attributes` test too.
logger.warning(
"Sequence classification models do not have output embeddings. `.get_output_embeddings` will be removed "
"in transformers v4.32."
)
return self.transformer.w
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: TFModelInputType | None = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSequenceClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = self.classifier(hidden_states)
in_logits = None
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = (
tf.argmax(tf.cast(tf.math.equal(input_ids, self.config.pad_token_id), input_ids.dtype), axis=-1)
- 1
)
sequence_lengths = tf.where(sequence_lengths >= 0, sequence_lengths, input_ids.shape[-1] - 1)
in_logits = tf.gather(logits, sequence_lengths, batch_dims=1, axis=1)
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
loss = None
if labels is not None:
if input_ids is not None:
batch_size, sequence_length = shape_list(input_ids)[:2]
else:
batch_size, sequence_length = shape_list(inputs_embeds)[:2]
if self.config.pad_token_id is None and batch_size != 1:
raise ValueError("Cannot handle batch sizes > 1 if no padding token is defined.")
if not tf.is_tensor(sequence_lengths):
in_logits = logits[0:batch_size, sequence_lengths]
loss = self.hf_compute_loss(tf.reshape(labels, [-1, 1]), tf.reshape(in_logits, [-1, self.num_labels]))
pooled_logits = in_logits if in_logits is not None else logits
if not return_dict:
output = (pooled_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bertweet/tokenization_bertweet.py | # coding=utf-8
# Copyright (c) 2020, VinAI Research and the HuggingFace Inc. team.
# Copyright 2018 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Tokenization classes for BERTweet"""
import html
import os
import re
from shutil import copyfile
from typing import List, Optional, Tuple
import regex
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.txt",
"merges_file": "bpe.codes",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"vinai/bertweet-base": "https://huggingface.co/vinai/bertweet-base/resolve/main/vocab.txt",
},
"merges_file": {
"vinai/bertweet-base": "https://huggingface.co/vinai/bertweet-base/resolve/main/bpe.codes",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"vinai/bertweet-base": 128,
}
def get_pairs(word):
"""
Return set of symbol pairs in a word.
Word is represented as tuple of symbols (symbols being variable-length strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
pairs = set(pairs)
return pairs
class BertweetTokenizer(PreTrainedTokenizer):
"""
Constructs a BERTweet tokenizer, using Byte-Pair-Encoding.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
normalization (`bool`, *optional*, defaults to `False`):
Whether or not to apply a normalization preprocess.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
merges_file,
normalization=False,
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
**kwargs,
):
try:
from emoji import demojize
self.demojizer = demojize
except ImportError:
logger.warning(
"emoji is not installed, thus not converting emoticons or emojis into text. Install emoji: pip3"
" install emoji==0.6.0"
)
self.demojizer = None
self.vocab_file = vocab_file
self.merges_file = merges_file
self.encoder = {}
self.encoder[str(bos_token)] = 0
self.encoder[str(pad_token)] = 1
self.encoder[str(eos_token)] = 2
self.encoder[str(unk_token)] = 3
self.add_from_file(vocab_file)
self.decoder = {v: k for k, v in self.encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[:-1]
merges = [tuple(merge.split()[:-1]) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
self.normalization = normalization
self.tweetPreprocessor = TweetTokenizer()
self.special_puncts = {"’": "'", "…": "..."}
super().__init__(
normalization=normalization,
bos_token=bos_token,
eos_token=eos_token,
sep_token=sep_token,
cls_token=cls_token,
unk_token=unk_token,
pad_token=pad_token,
mask_token=mask_token,
**kwargs,
)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A BERTweet sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. BERTweet does
not make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + sep + token_ids_1 + sep) * [0]
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
word = tuple(list(word[:-1]) + [word[-1] + "</w>"])
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = "@@ ".join(word)
word = word[:-4]
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
if self.normalization: # Perform Tweet normalization before performing BPE
text = self.normalizeTweet(text)
split_tokens = []
words = re.findall(r"\S+\n?", text)
for token in words:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
def normalizeTweet(self, tweet):
"""
Normalize a raw Tweet
"""
for punct in self.special_puncts:
tweet = tweet.replace(punct, self.special_puncts[punct])
tokens = self.tweetPreprocessor.tokenize(tweet)
normTweet = " ".join([self.normalizeToken(token) for token in tokens])
normTweet = (
normTweet.replace("cannot ", "can not ")
.replace("n't ", " n't ")
.replace("n 't ", " n't ")
.replace("ca n't", "can't")
.replace("ai n't", "ain't")
)
normTweet = (
normTweet.replace("'m ", " 'm ")
.replace("'re ", " 're ")
.replace("'s ", " 's ")
.replace("'ll ", " 'll ")
.replace("'d ", " 'd ")
.replace("'ve ", " 've ")
)
normTweet = (
normTweet.replace(" p . m .", " p.m.")
.replace(" p . m ", " p.m ")
.replace(" a . m .", " a.m.")
.replace(" a . m ", " a.m ")
)
return " ".join(normTweet.split())
def normalizeToken(self, token):
"""
Normalize tokens in a Tweet
"""
lowercased_token = token.lower()
if token.startswith("@"):
return "@USER"
elif lowercased_token.startswith("http") or lowercased_token.startswith("www"):
return "HTTPURL"
elif len(token) == 1:
if token in self.special_puncts:
return self.special_puncts[token]
if self.demojizer is not None:
return self.demojizer(token)
else:
return token
else:
return token
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace("@@ ", "").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
out_merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
if os.path.abspath(self.merges_file) != os.path.abspath(out_merge_file):
copyfile(self.merges_file, out_merge_file)
return out_vocab_file, out_merge_file
# def decode(self, token_ids, skip_special_tokens=False, clean_up_tokenization_spaces=True):
# filtered_tokens = ' '.join(self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens))
# tokens_generated_so_far = re.sub('(@@ )', '', string=filtered_tokens)
# tokens_generated_so_far = re.sub('(@@ ?$)', '', string=tokens_generated_so_far)
# return ''.join(tokens_generated_so_far)
def add_from_file(self, f):
"""
Loads a pre-existing dictionary from a text file and adds its symbols to this instance.
"""
if isinstance(f, str):
try:
with open(f, "r", encoding="utf-8") as fd:
self.add_from_file(fd)
except FileNotFoundError as fnfe:
raise fnfe
except UnicodeError:
raise Exception(f"Incorrect encoding detected in {f}, please rebuild the dataset")
return
lines = f.readlines()
for lineTmp in lines:
line = lineTmp.strip()
idx = line.rfind(" ")
if idx == -1:
raise ValueError("Incorrect dictionary format, expected '<token> <cnt>'")
word = line[:idx]
self.encoder[word] = len(self.encoder)
# Natural Language Toolkit: Twitter Tokenizer
#
# Copyright (C) 2001-2020 NLTK Project
# Author: Christopher Potts <cgpotts@stanford.edu>
# Ewan Klein <ewan@inf.ed.ac.uk> (modifications)
# Pierpaolo Pantone <> (modifications)
# URL: http://nltk.org/
# For license information, see LICENSE.TXT
#
"""
Twitter-aware tokenizer, designed to be flexible and easy to adapt to new domains and tasks. The basic logic is this:
1. The tuple regex_strings defines a list of regular expression strings.
2. The regex_strings strings are put, in order, into a compiled regular expression object called word_re.
3. The tokenization is done by word_re.findall(s), where s is the user-supplied string, inside the tokenize() method of
the class Tokenizer.
4. When instantiating Tokenizer objects, there is a single option: preserve_case. By default, it is set to True. If it
is set to False, then the tokenizer will lowercase everything except for emoticons.
"""
######################################################################
#
# import regex # https://github.com/nltk/nltk/issues/2409
# import html
#
######################################################################
# The following strings are components in the regular expression
# that is used for tokenizing. It's important that phone_number
# appears first in the final regex (since it can contain whitespace).
# It also could matter that tags comes after emoticons, due to the
# possibility of having text like
#
# <:| and some text >:)
#
# Most importantly, the final element should always be last, since it
# does a last ditch whitespace-based tokenization of whatever is left.
# ToDo: Update with http://en.wikipedia.org/wiki/List_of_emoticons ?
# This particular element is used in a couple ways, so we define it
# with a name:
# docstyle-ignore
EMOTICONS = r"""
(?:
[<>]?
[:;=8] # eyes
[\-o\*\']? # optional nose
[\)\]\(\[dDpP/\:\}\{@\|\\] # mouth
|
[\)\]\(\[dDpP/\:\}\{@\|\\] # mouth
[\-o\*\']? # optional nose
[:;=8] # eyes
[<>]?
|
<3 # heart
)"""
# URL pattern due to John Gruber, modified by Tom Winzig. See
# https://gist.github.com/winzig/8894715
# docstyle-ignore
URLS = r""" # Capture 1: entire matched URL
(?:
https?: # URL protocol and colon
(?:
/{1,3} # 1-3 slashes
| # or
[a-z0-9%] # Single letter or digit or '%'
# (Trying not to match e.g. "URI::Escape")
)
| # or
# looks like domain name followed by a slash:
[a-z0-9.\-]+[.]
(?:[a-z]{2,13})
/
)
(?: # One or more:
[^\s()<>{}\[\]]+ # Run of non-space, non-()<>{}[]
| # or
\([^\s()]*?\([^\s()]+\)[^\s()]*?\) # balanced parens, one level deep: (...(...)...)
|
\([^\s]+?\) # balanced parens, non-recursive: (...)
)+
(?: # End with:
\([^\s()]*?\([^\s()]+\)[^\s()]*?\) # balanced parens, one level deep: (...(...)...)
|
\([^\s]+?\) # balanced parens, non-recursive: (...)
| # or
[^\s`!()\[\]{};:'".,<>?«»“”‘’] # not a space or one of these punct chars
)
| # OR, the following to match naked domains:
(?:
(?<!@) # not preceded by a @, avoid matching foo@_gmail.com_
[a-z0-9]+
(?:[.\-][a-z0-9]+)*
[.]
(?:[a-z]{2,13})
\b
/?
(?!@) # not succeeded by a @,
# avoid matching "foo.na" in "foo.na@example.com"
)
"""
# docstyle-ignore
# The components of the tokenizer:
REGEXPS = (
URLS,
# Phone numbers:
r"""
(?:
(?: # (international)
\+?[01]
[ *\-.\)]*
)?
(?: # (area code)
[\(]?
\d{3}
[ *\-.\)]*
)?
\d{3} # exchange
[ *\-.\)]*
\d{4} # base
)""",
# ASCII Emoticons
EMOTICONS,
# HTML tags:
r"""<[^>\s]+>""",
# ASCII Arrows
r"""[\-]+>|<[\-]+""",
# Twitter username:
r"""(?:@[\w_]+)""",
# Twitter hashtags:
r"""(?:\#+[\w_]+[\w\'_\-]*[\w_]+)""",
# email addresses
r"""[\w.+-]+@[\w-]+\.(?:[\w-]\.?)+[\w-]""",
# docstyle-ignore
# Remaining word types:
r"""
(?:[^\W\d_](?:[^\W\d_]|['\-_])+[^\W\d_]) # Words with apostrophes or dashes.
|
(?:[+\-]?\d+[,/.:-]\d+[+\-]?) # Numbers, including fractions, decimals.
|
(?:[\w_]+) # Words without apostrophes or dashes.
|
(?:\.(?:\s*\.){1,}) # Ellipsis dots.
|
(?:\S) # Everything else that isn't whitespace.
""",
)
######################################################################
# This is the core tokenizing regex:
WORD_RE = regex.compile(r"""(%s)""" % "|".join(REGEXPS), regex.VERBOSE | regex.I | regex.UNICODE)
# WORD_RE performs poorly on these patterns:
HANG_RE = regex.compile(r"([^a-zA-Z0-9])\1{3,}")
# The emoticon string gets its own regex so that we can preserve case for
# them as needed:
EMOTICON_RE = regex.compile(EMOTICONS, regex.VERBOSE | regex.I | regex.UNICODE)
# These are for regularizing HTML entities to Unicode:
ENT_RE = regex.compile(r"&(#?(x?))([^&;\s]+);")
######################################################################
# Functions for converting html entities
######################################################################
def _str_to_unicode(text, encoding=None, errors="strict"):
if encoding is None:
encoding = "utf-8"
if isinstance(text, bytes):
return text.decode(encoding, errors)
return text
def _replace_html_entities(text, keep=(), remove_illegal=True, encoding="utf-8"):
"""
Remove entities from text by converting them to their corresponding unicode character.
Args:
text:
A unicode string or a byte string encoded in the given *encoding* (which defaults to 'utf-8').
keep (list):
List of entity names which should not be replaced. This supports both numeric entities (`&#nnnn;` and
`&#hhhh;`) and named entities (such as ` ` or `>`).
remove_illegal (bool):
If `True`, entities that can't be converted are removed. Otherwise, entities that can't be converted are
kept "as is".
Returns: A unicode string with the entities removed.
See https://github.com/scrapy/w3lib/blob/master/w3lib/html.py
Examples:
```python
>>> from nltk.tokenize.casual import _replace_html_entities
>>> _replace_html_entities(b"Price: £100")
'Price: \\xa3100'
>>> print(_replace_html_entities(b"Price: £100"))
Price: £100
```"""
def _convert_entity(match):
entity_body = match.group(3)
if match.group(1):
try:
if match.group(2):
number = int(entity_body, 16)
else:
number = int(entity_body, 10)
# Numeric character references in the 80-9F range are typically
# interpreted by browsers as representing the characters mapped
# to bytes 80-9F in the Windows-1252 encoding. For more info
# see: https://en.wikipedia.org/wiki/ISO/IEC_8859-1#Similar_character_sets
if 0x80 <= number <= 0x9F:
return bytes((number,)).decode("cp1252")
except ValueError:
number = None
else:
if entity_body in keep:
return match.group(0)
else:
number = html.entities.name2codepoint.get(entity_body)
if number is not None:
try:
return chr(number)
except (ValueError, OverflowError):
pass
return "" if remove_illegal else match.group(0)
return ENT_RE.sub(_convert_entity, _str_to_unicode(text, encoding))
######################################################################
class TweetTokenizer:
r"""
Examples:
```python
>>> # Tokenizer for tweets.
>>> from nltk.tokenize import TweetTokenizer
>>> tknzr = TweetTokenizer()
>>> s0 = "This is a cooool #dummysmiley: :-) :-P <3 and some arrows < > -> <--"
>>> tknzr.tokenize(s0)
['This', 'is', 'a', 'cooool', '#dummysmiley', ':', ':-)', ':-P', '<3', 'and', 'some', 'arrows', '<', '>', '->', '<--']
>>> # Examples using *strip_handles* and *reduce_len parameters*:
>>> tknzr = TweetTokenizer(strip_handles=True, reduce_len=True)
>>> s1 = "@remy: This is waaaaayyyy too much for you!!!!!!"
>>> tknzr.tokenize(s1)
[':', 'This', 'is', 'waaayyy', 'too', 'much', 'for', 'you', '!', '!', '!']
```"""
def __init__(self, preserve_case=True, reduce_len=False, strip_handles=False):
self.preserve_case = preserve_case
self.reduce_len = reduce_len
self.strip_handles = strip_handles
def tokenize(self, text):
"""
Args:
text: str
Returns: list(str) A tokenized list of strings; concatenating this list returns the original string if
`preserve_case=False`
"""
# Fix HTML character entities:
text = _replace_html_entities(text)
# Remove username handles
if self.strip_handles:
text = remove_handles(text)
# Normalize word lengthening
if self.reduce_len:
text = reduce_lengthening(text)
# Shorten problematic sequences of characters
safe_text = HANG_RE.sub(r"\1\1\1", text)
# Tokenize:
words = WORD_RE.findall(safe_text)
# Possibly alter the case, but avoid changing emoticons like :D into :d:
if not self.preserve_case:
words = [x if EMOTICON_RE.search(x) else x.lower() for x in words]
return words
######################################################################
# Normalization Functions
######################################################################
def reduce_lengthening(text):
"""
Replace repeated character sequences of length 3 or greater with sequences of length 3.
"""
pattern = regex.compile(r"(.)\1{2,}")
return pattern.sub(r"\1\1\1", text)
def remove_handles(text):
"""
Remove Twitter username handles from text.
"""
pattern = regex.compile(
r"(?<![A-Za-z0-9_!@#\$%&*])@(([A-Za-z0-9_]){20}(?!@))|(?<![A-Za-z0-9_!@#\$%&*])@(([A-Za-z0-9_]){1,19})(?![A-Za-z0-9_]*@)"
)
# Substitute handles with ' ' to ensure that text on either side of removed handles are tokenized correctly
return pattern.sub(" ", text)
######################################################################
# Tokenization Function
######################################################################
def casual_tokenize(text, preserve_case=True, reduce_len=False, strip_handles=False):
"""
Convenience function for wrapping the tokenizer.
"""
return TweetTokenizer(preserve_case=preserve_case, reduce_len=reduce_len, strip_handles=strip_handles).tokenize(
text
)
###############################################################################
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/bertweet/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import _LazyModule
_import_structure = {"tokenization_bertweet": ["BertweetTokenizer"]}
if TYPE_CHECKING:
from .tokenization_bertweet import BertweetTokenizer
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/convert_distilhubert_original_s3prl_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Hubert checkpoint."""
import argparse
import torch
from s3prl.hub import distilhubert
from transformers import HubertConfig, HubertModel, Wav2Vec2FeatureExtractor, logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
MAPPING = {
"post_extract_proj": "feature_projection.projection",
"encoder.pos_conv.0": "encoder.pos_conv_embed.conv",
"self_attn.k_proj": "encoder.layers.*.attention.k_proj",
"self_attn.v_proj": "encoder.layers.*.attention.v_proj",
"self_attn.q_proj": "encoder.layers.*.attention.q_proj",
"self_attn.out_proj": "encoder.layers.*.attention.out_proj",
"self_attn_layer_norm": "encoder.layers.*.layer_norm",
"fc1": "encoder.layers.*.feed_forward.intermediate_dense",
"fc2": "encoder.layers.*.feed_forward.output_dense",
"final_layer_norm": "encoder.layers.*.final_layer_norm",
"encoder.layer_norm": "encoder.layer_norm",
"mask_emb": "masked_spec_embed",
}
def set_recursively(hf_pointer, key, value, full_name, weight_type):
for attribute in key.split("."):
hf_pointer = getattr(hf_pointer, attribute)
if weight_type is not None:
hf_shape = getattr(hf_pointer, weight_type).shape
else:
hf_shape = hf_pointer.shape
assert hf_shape == value.shape, (
f"Shape of hf {key + '.' + weight_type if weight_type is not None else ''} is {hf_shape}, but should be"
f" {value.shape} for {full_name}"
)
if weight_type == "weight":
hf_pointer.weight.data = value
elif weight_type == "weight_g":
hf_pointer.weight_g.data = value
elif weight_type == "weight_v":
hf_pointer.weight_v.data = value
elif weight_type == "bias":
hf_pointer.bias.data = value
else:
hf_pointer.data = value
logger.info(f"{key + '.' + weight_type if weight_type is not None else ''} was initialized from {full_name}.")
def recursively_load_weights(fairseq_model, hf_model):
unused_weights = []
fairseq_dict = fairseq_model.state_dict()
feature_extractor = hf_model.feature_extractor
for name, value in fairseq_dict.items():
is_used = False
if "conv_layers" in name:
load_conv_layer(
name,
value,
feature_extractor,
unused_weights,
hf_model.config.feat_extract_norm == "group",
)
is_used = True
else:
for key, mapped_key in MAPPING.items():
mapped_key = mapped_key
if key in name:
is_used = True
if "*" in mapped_key:
layer_index = name.split(key)[0].split(".")[-2]
mapped_key = mapped_key.replace("*", layer_index)
if "weight_g" in name:
weight_type = "weight_g"
elif "weight_v" in name:
weight_type = "weight_v"
elif "weight" in name:
weight_type = "weight"
elif "bias" in name:
weight_type = "bias"
else:
weight_type = None
set_recursively(hf_model, mapped_key, value, name, weight_type)
continue
if not is_used:
unused_weights.append(name)
logger.warning(f"Unused weights: {unused_weights}")
def load_conv_layer(full_name, value, feature_extractor, unused_weights, use_group_norm):
name = full_name.split("conv_layers.")[-1]
items = name.split(".")
layer_id = int(items[0])
type_id = int(items[1])
if type_id == 0:
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.bias.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.bias.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.bias.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.weight.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif (type_id == 2 and not use_group_norm) or (type_id == 2 and layer_id == 0 and use_group_norm):
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.bias.data.shape, (
f"{full_name} has size {value.shape}, but {feature_extractor[layer_id].layer_norm.bias.data.shape} was"
" found."
)
feature_extractor.conv_layers[layer_id].layer_norm.bias.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor[layer_id].layer_norm.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].layer_norm.weight.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
else:
unused_weights.append(full_name)
def convert_config(model):
config = HubertConfig()
fs_config = model.config
config.activation_dropout = fs_config.activation_dropout
config.apply_spec_augment = False
config.attention_dropout = fs_config.attention_dropout
config.conv_bias = False
conv_layers = eval(fs_config.extractor_conv_feature_layers)
config.conv_dim = [x[0] for x in conv_layers]
config.conv_kernel = [x[1] for x in conv_layers]
config.conv_stride = [x[2] for x in conv_layers]
config.feat_extract_activation = "gelu"
config.feat_extract_norm = "layer" if fs_config.extractor_mode == "layer_norm" else "group"
config.feat_proj_layer_norm = False
config.feat_proj_dropout = 0.0
config.final_dropout = 0.0
config.hidden_act = fs_config.activation_fn
config.hidden_dropout = fs_config.dropout
config.hidden_size = fs_config.encoder_embed_dim
config.initializer_range = 0.02
config.intermediate_size = fs_config.encoder_ffn_embed_dim
config.layer_norm_eps = 1e-5
config.layerdrop = 0.0
config.num_attention_heads = fs_config.encoder_attention_heads
config.num_conv_pos_embedding_groups = fs_config.conv_pos_groups
config.num_conv_pos_embeddings = fs_config.conv_pos
config.num_feat_extract_layers = len(conv_layers)
config.num_hidden_layers = fs_config.encoder_layers
return config
@torch.no_grad()
def convert_hubert_checkpoint(pytorch_dump_folder_path, config_path=None):
"""
Copy/paste/tweak model's weights to transformers design.
"""
model = distilhubert().model.model
if config_path is not None:
config = HubertConfig.from_pretrained(config_path)
else:
config = convert_config(model)
model = model.eval()
feature_extractor = Wav2Vec2FeatureExtractor(
feature_size=1,
sampling_rate=16000,
padding_value=0,
do_normalize=False,
return_attention_mask=False,
)
hf_model = HubertModel(config)
recursively_load_weights(model, hf_model)
feature_extractor.save_pretrained(pytorch_dump_folder_path)
hf_model.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
args = parser.parse_args()
convert_hubert_checkpoint(args.pytorch_dump_folder_path, args.config_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/modeling_tf_hubert.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TensorFlow Hubert model."""
from __future__ import annotations
import warnings
from typing import Any, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import TFBaseModelOutput, TFCausalLMOutput
from ...modeling_tf_utils import (
TFPreTrainedModel,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import (
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_hubert import HubertConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "HubertConfig"
TF_HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/hubert-base-ls960",
# See all Hubert models at https://huggingface.co/models?filter=hubert
]
LARGE_NEGATIVE = -1e8
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2._sample_without_replacement
def _sample_without_replacement(distribution, num_samples):
"""
Categorical sampling without replacement is currently not implemented. The gumbel-max trick will do for now - see
https://github.com/tensorflow/tensorflow/issues/9260 for more info
"""
z = -tf.math.log(tf.random.uniform(shape_list(distribution), 0, 1))
_, indices = tf.nn.top_k(distribution + z, num_samples)
return indices
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2._scatter_values_on_batch_indices
def _scatter_values_on_batch_indices(values, batch_indices, output_shape):
"""
Scatter function as in PyTorch with indices in format (batch_dim, indixes)
"""
indices_shape = shape_list(batch_indices)
# broadcast batch dim to indices_shape
broad_casted_batch_dims = tf.reshape(
tf.broadcast_to(tf.expand_dims(tf.range(indices_shape[0]), axis=-1), indices_shape), [1, -1]
)
# transform batch_indices to pair_indices
pair_indices = tf.transpose(tf.concat([broad_casted_batch_dims, tf.reshape(batch_indices, [1, -1])], 0))
# scatter values to pair indices
return tf.scatter_nd(pair_indices, tf.reshape(values, [-1]), output_shape)
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2._compute_mask_indices
def _compute_mask_indices(
shape: Tuple[int, int],
mask_prob: float,
mask_length: int,
min_masks: int = 0,
) -> tf.Tensor:
"""
Computes random mask spans for a given shape
Args:
shape: the shape for which to compute masks.
should be of size 2 where first element is batch size and 2nd is timesteps
attention_mask: optional padding mask of the same size as shape, which will prevent masking padded elements
mask_prob:
probability for each token to be chosen as start of the span to be masked. this will be multiplied by
number of timesteps divided by length of mask span to mask approximately this percentage of all elements.
however due to overlaps, the actual number will be smaller (unless no_overlap is True)
mask_length: size of the mask
min_masks: minimum number of masked spans
Adapted from [fairseq's
data_utils.py](https://github.com/pytorch/fairseq/blob/e0788f7007a8473a76db573985031f3c94201e79/fairseq/data/data_utils.py#L376).
"""
batch_size, sequence_length = shape
if mask_length < 1:
raise ValueError("`mask_length` has to be bigger than 0.")
tf.debugging.assert_less(
mask_length,
sequence_length,
message=(
f"`mask_length` has to be smaller than `sequence_length`, but got `mask_length`: {mask_length} and"
f" `sequence_length`: {sequence_length}`"
),
)
# compute number of masked spans in batch
num_masked_spans = mask_prob * tf.cast(sequence_length, tf.float32) / mask_length + tf.random.uniform((1,))
num_masked_spans = tf.maximum(num_masked_spans, min_masks)
num_masked_spans = tf.cast(num_masked_spans, tf.int32)
# make sure num masked indices <= sequence_length
num_masked_spans = tf.math.minimum(sequence_length // mask_length, num_masked_spans)
num_masked_spans = tf.squeeze(num_masked_spans)
# SpecAugment mask to fill
spec_aug_mask = tf.zeros((batch_size, sequence_length), dtype=tf.int32)
# uniform distribution to sample from, make sure that offset samples are < sequence_length
uniform_dist = tf.ones((batch_size, sequence_length - (mask_length - 1)))
# get random indices to mask
spec_aug_mask_idxs = _sample_without_replacement(uniform_dist, num_masked_spans)
# expand masked indices to masked spans
spec_aug_mask_idxs = tf.expand_dims(spec_aug_mask_idxs, -1)
spec_aug_mask_idxs = tf.tile(spec_aug_mask_idxs, (1, 1, mask_length))
spec_aug_mask_idxs = tf.reshape(spec_aug_mask_idxs, (batch_size, num_masked_spans * mask_length))
offsets = tf.range(mask_length)[tf.newaxis, tf.newaxis, :]
offsets = tf.tile(offsets, (batch_size, num_masked_spans, 1))
offsets = tf.reshape(offsets, (batch_size, num_masked_spans * mask_length))
spec_aug_mask_idxs = spec_aug_mask_idxs + offsets
# scatter indices to mask
spec_aug_mask = _scatter_values_on_batch_indices(
tf.ones_like(spec_aug_mask_idxs), spec_aug_mask_idxs, tf.shape(spec_aug_mask)
)
return spec_aug_mask
# Copied from transformers.models.bart.modeling_tf_bart._expand_mask
def _expand_mask(mask: tf.Tensor, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
src_len = shape_list(mask)[1]
tgt_len = tgt_len if tgt_len is not None else src_len
one_cst = tf.constant(1.0)
mask = tf.cast(mask, dtype=one_cst.dtype)
expanded_mask = tf.tile(mask[:, None, None, :], (1, 1, tgt_len, 1))
return (one_cst - expanded_mask) * LARGE_NEGATIVE
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2GroupNorm with Wav2Vec2->Hubert
class TFHubertGroupNorm(tf.keras.layers.Layer):
"""
From tensorflow-addons https://www.tensorflow.org/addons/api_docs/python/tfa/layers/GroupNormalization
"""
def __init__(
self,
groups: int = 32,
axis: int = -1,
epsilon: float = 1e-3,
center: bool = True,
scale: bool = True,
beta_initializer: tf.keras.initializers.Initializer = "zeros",
gamma_initializer: tf.keras.initializers.Initializer = "ones",
beta_regularizer: tf.keras.regularizers.Regularizer = None,
gamma_regularizer: tf.keras.regularizers.Regularizer = None,
beta_constraint: tf.keras.constraints.Constraint = None,
gamma_constraint: tf.keras.constraints.Constraint = None,
**kwargs,
):
super().__init__(**kwargs)
self.supports_masking = True
self.groups = groups
self.axis = axis
self.epsilon = epsilon
self.center = center
self.scale = scale
self.beta_initializer = tf.keras.initializers.get(beta_initializer)
self.gamma_initializer = tf.keras.initializers.get(gamma_initializer)
self.beta_regularizer = tf.keras.regularizers.get(beta_regularizer)
self.gamma_regularizer = tf.keras.regularizers.get(gamma_regularizer)
self.beta_constraint = tf.keras.constraints.get(beta_constraint)
self.gamma_constraint = tf.keras.constraints.get(gamma_constraint)
self._check_axis()
def build(self, input_shape):
self._check_if_input_shape_is_none(input_shape)
self._set_number_of_groups_for_instance_norm(input_shape)
self._check_size_of_dimensions(input_shape)
self._create_input_spec(input_shape)
self._add_gamma_weight(input_shape)
self._add_beta_weight(input_shape)
self.built = True
super().build(input_shape)
def call(self, inputs):
input_shape = tf.keras.backend.int_shape(inputs)
tensor_input_shape = tf.shape(inputs)
reshaped_inputs, group_shape = self._reshape_into_groups(inputs, input_shape, tensor_input_shape)
normalized_inputs = self._apply_normalization(reshaped_inputs, input_shape)
is_instance_norm = (input_shape[self.axis] // self.groups) == 1
if not is_instance_norm:
outputs = tf.reshape(normalized_inputs, tensor_input_shape)
else:
outputs = normalized_inputs
return outputs
def get_config(self):
config = {
"groups": self.groups,
"axis": self.axis,
"epsilon": self.epsilon,
"center": self.center,
"scale": self.scale,
"beta_initializer": tf.keras.initializers.serialize(self.beta_initializer),
"gamma_initializer": tf.keras.initializers.serialize(self.gamma_initializer),
"beta_regularizer": tf.keras.regularizers.serialize(self.beta_regularizer),
"gamma_regularizer": tf.keras.regularizers.serialize(self.gamma_regularizer),
"beta_constraint": tf.keras.constraints.serialize(self.beta_constraint),
"gamma_constraint": tf.keras.constraints.serialize(self.gamma_constraint),
}
base_config = super().get_config()
return {**base_config, **config}
def compute_output_shape(self, input_shape):
return input_shape
def _reshape_into_groups(self, inputs, input_shape, tensor_input_shape):
group_shape = [tensor_input_shape[i] for i in range(len(input_shape))]
is_instance_norm = (input_shape[self.axis] // self.groups) == 1
if not is_instance_norm:
group_shape[self.axis] = input_shape[self.axis] // self.groups
group_shape.insert(self.axis, self.groups)
group_shape = tf.stack(group_shape)
reshaped_inputs = tf.reshape(inputs, group_shape)
return reshaped_inputs, group_shape
else:
return inputs, group_shape
def _apply_normalization(self, reshaped_inputs, input_shape):
group_shape = tf.keras.backend.int_shape(reshaped_inputs)
group_reduction_axes = list(range(1, len(group_shape)))
is_instance_norm = (input_shape[self.axis] // self.groups) == 1
if not is_instance_norm:
axis = -2 if self.axis == -1 else self.axis - 1
else:
axis = -1 if self.axis == -1 else self.axis - 1
group_reduction_axes.pop(axis)
mean, variance = tf.nn.moments(reshaped_inputs, group_reduction_axes, keepdims=True)
gamma, beta = self._get_reshaped_weights(input_shape)
normalized_inputs = tf.nn.batch_normalization(
reshaped_inputs,
mean=mean,
variance=variance,
scale=gamma,
offset=beta,
variance_epsilon=self.epsilon,
)
return normalized_inputs
def _get_reshaped_weights(self, input_shape):
broadcast_shape = self._create_broadcast_shape(input_shape)
gamma = None
beta = None
if self.scale:
gamma = tf.reshape(self.gamma, broadcast_shape)
if self.center:
beta = tf.reshape(self.beta, broadcast_shape)
return gamma, beta
def _check_if_input_shape_is_none(self, input_shape):
dim = input_shape[self.axis]
if dim is None:
raise ValueError(
"Axis "
+ str(self.axis)
+ " of input tensor should have a defined dimension but the layer received an input with shape "
+ str(input_shape)
+ "."
)
def _set_number_of_groups_for_instance_norm(self, input_shape):
dim = input_shape[self.axis]
if self.groups == -1:
self.groups = dim
def _check_size_of_dimensions(self, input_shape):
dim = input_shape[self.axis]
if dim < self.groups:
raise ValueError(
"Number of groups ("
+ str(self.groups)
+ ") cannot be more than the number of channels ("
+ str(dim)
+ ")."
)
if dim % self.groups != 0:
raise ValueError(
"Number of groups ("
+ str(self.groups)
+ ") must be a multiple of the number of channels ("
+ str(dim)
+ ")."
)
def _check_axis(self):
if self.axis == 0:
raise ValueError(
"You are trying to normalize your batch axis. Do you want to use tf.layer.batch_normalization instead"
)
def _create_input_spec(self, input_shape):
dim = input_shape[self.axis]
self.input_spec = tf.keras.layers.InputSpec(ndim=len(input_shape), axes={self.axis: dim})
def _add_gamma_weight(self, input_shape):
dim = input_shape[self.axis]
shape = (dim,)
if self.scale:
self.gamma = self.add_weight(
shape=shape,
name="gamma",
initializer=self.gamma_initializer,
regularizer=self.gamma_regularizer,
constraint=self.gamma_constraint,
)
else:
self.gamma = None
def _add_beta_weight(self, input_shape):
dim = input_shape[self.axis]
shape = (dim,)
if self.center:
self.beta = self.add_weight(
shape=shape,
name="beta",
initializer=self.beta_initializer,
regularizer=self.beta_regularizer,
constraint=self.beta_constraint,
)
else:
self.beta = None
def _create_broadcast_shape(self, input_shape):
broadcast_shape = [1] * len(input_shape)
is_instance_norm = (input_shape[self.axis] // self.groups) == 1
if not is_instance_norm:
broadcast_shape[self.axis] = input_shape[self.axis] // self.groups
broadcast_shape.insert(self.axis, self.groups)
else:
broadcast_shape[self.axis] = self.groups
return broadcast_shape
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2WeightNormConv1D with Wav2Vec2->Hubert
class TFHubertWeightNormConv1D(tf.keras.layers.Conv1D):
"""Adapted from https://www.tensorflow.org/probability/api_docs/python/tfp/layers/weight_norm/WeightNorm"""
def __init__(self, filters, kernel_size, groups, explicit_padding, **kwargs):
super().__init__(
filters=filters,
kernel_size=kernel_size,
groups=groups,
padding="valid",
use_bias=True,
bias_initializer="he_normal",
**kwargs,
)
self.explicit_padding = explicit_padding
self.filter_axis = 2
self.initialized = False
self.kernel_norm_axes = tf.constant([0, 1])
def _init_norm(self):
"""Set the norm of the weight vector."""
kernel_norm = tf.sqrt(tf.reduce_sum(tf.square(self.weight_v), axis=self.kernel_norm_axes))
self.weight_g.assign(kernel_norm[:, tf.newaxis, tf.newaxis])
def _normalize_kernel(self):
"""Generate normalized weights."""
kernel = tf.nn.l2_normalize(self.weight_v, axis=self.kernel_norm_axes) * tf.transpose(self.weight_g)
self.kernel = tf.transpose(kernel)
def build(self, input_shape):
if not self.built:
input_shape = input_shape.as_list()
# If a specific input shape is passed in, we need to modify it to account for padding
# Not necessary if those portions of the shape are None
if input_shape[-2] is not None:
input_shape[-2] += self.explicit_padding * 2
super().build(input_shape)
self.kernel = tf.Variable(tf.transpose(self.kernel), name="weight_v", trainable=True)
self.weight_v = self.kernel
self.weight_g = self.add_weight(
name="weight_g",
shape=(int(self.weight_v.shape[self.filter_axis]), 1, 1),
initializer="ones",
dtype=self.weight_v.dtype,
trainable=True,
)
self.bias = self.add_weight(name="bias", shape=(self.filters,), initializer="zeros", trainable=True)
def call(self, inputs):
if not self.initialized:
self._init_norm()
self.initialized = True
self._normalize_kernel()
padded_inputs = tf.pad(inputs, ((0, 0), (self.explicit_padding, self.explicit_padding), (0, 0)))
output = super().call(padded_inputs)
return output
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2NoLayerNormConvLayer with Wav2Vec2->Hubert
class TFHubertNoLayerNormConvLayer(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, layer_id: int = 0, **kwargs: Any) -> None:
super().__init__(**kwargs)
self.in_conv_dim = config.conv_dim[layer_id] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = tf.keras.layers.Conv1D(
filters=self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
strides=config.conv_stride[layer_id],
use_bias=config.conv_bias,
name="conv",
)
self.activation = get_tf_activation(config.feat_extract_activation)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.conv(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2LayerNormConvLayer with Wav2Vec2->Hubert
class TFHubertLayerNormConvLayer(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, layer_id: int = 0, **kwargs: Any) -> None:
super().__init__(**kwargs)
self.in_conv_dim = config.conv_dim[layer_id] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = tf.keras.layers.Conv1D(
filters=self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
strides=config.conv_stride[layer_id],
use_bias=config.conv_bias,
name="conv",
)
self.layer_norm = tf.keras.layers.LayerNormalization(name="layer_norm", epsilon=config.layer_norm_eps)
self.activation = get_tf_activation(config.feat_extract_activation)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.conv(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2GroupNormConvLayer with Wav2Vec2->Hubert
class TFHubertGroupNormConvLayer(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, layer_id: int = 0, **kwargs: Any) -> None:
super().__init__(**kwargs)
self.in_conv_dim = config.conv_dim[layer_id] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = tf.keras.layers.Conv1D(
filters=self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
strides=config.conv_stride[layer_id],
use_bias=config.conv_bias,
name="conv",
)
self.activation = get_tf_activation(config.feat_extract_activation)
self.layer_norm = TFHubertGroupNorm(groups=self.out_conv_dim, epsilon=config.layer_norm_eps, name="layer_norm")
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.conv(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2PositionalConvEmbedding with Wav2Vec2->Hubert
class TFHubertPositionalConvEmbedding(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs: Any) -> None:
super().__init__(**kwargs)
self.conv = TFHubertWeightNormConv1D(
filters=config.hidden_size,
kernel_size=config.num_conv_pos_embeddings,
groups=config.num_conv_pos_embedding_groups,
explicit_padding=config.num_conv_pos_embeddings // 2,
name="conv",
)
self.padding = TFHubertSamePadLayer(config.num_conv_pos_embeddings)
self.activation = get_tf_activation(config.feat_extract_activation)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.conv(hidden_states)
hidden_states = self.padding(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2SamePadLayer with Wav2Vec2->Hubert
class TFHubertSamePadLayer(tf.keras.layers.Layer):
def __init__(self, num_conv_pos_embeddings, **kwargs):
super().__init__(**kwargs)
self.num_pad_remove = 1 if num_conv_pos_embeddings % 2 == 0 else 0
def call(self, hidden_states):
if self.num_pad_remove > 0:
hidden_states = hidden_states[:, : -self.num_pad_remove, :]
return hidden_states
class TFHubertFeatureEncoder(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs: Any) -> None:
super().__init__(**kwargs)
if config.feat_extract_norm == "group":
conv_layers = [TFHubertGroupNormConvLayer(config, layer_id=0, name=f"conv_layers.{0}")] + [
TFHubertNoLayerNormConvLayer(config, layer_id=i + 1, name=f"conv_layers.{i+1}")
for i in range(config.num_feat_extract_layers - 1)
]
elif config.feat_extract_norm == "layer":
conv_layers = [
TFHubertLayerNormConvLayer(config, layer_id=i, name=f"conv_layers.{i}")
for i in range(config.num_feat_extract_layers)
]
else:
raise ValueError(
f"`config.feat_extract_norm` is {config.feat_extract_norm}, but has to be one of ['group', 'layer']"
)
self.conv_layers = conv_layers
def call(self, input_values):
hidden_states = tf.expand_dims(input_values, -1)
for conv_layer in self.conv_layers:
hidden_states = conv_layer(hidden_states)
return hidden_states
class TFHubertFeatureExtractor(TFHubertFeatureEncoder):
def __init__(self, config, **kwargs):
super().__init__(config, **kwargs)
warnings.warn(
f"The class `{self.__class__.__name__}` has been depreciated "
"and will be removed in Transformers v5. "
f"Use `{self.__class__.__bases__[0].__name__}` instead.",
FutureWarning,
)
class TFHubertFeatureProjection(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.projection = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
bias_initializer="zeros",
name="projection",
)
self.dropout = tf.keras.layers.Dropout(rate=config.feat_proj_dropout)
def call(self, hidden_states: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.projection(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
return hidden_states
# Copied from transformers.models.bart.modeling_tf_bart.TFBartAttention with TFBart->TFHubert
class TFHubertAttention(tf.keras.layers.Layer):
"""Multi-headed attention from "Attention Is All You Need"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
**kwargs,
):
super().__init__(**kwargs)
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = tf.keras.layers.Dropout(dropout)
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="k_proj")
self.q_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="q_proj")
self.v_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="v_proj")
self.out_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="out_proj")
def _shape(self, tensor: tf.Tensor, seq_len: int, bsz: int):
return tf.transpose(tf.reshape(tensor, (bsz, seq_len, self.num_heads, self.head_dim)), (0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
key_value_states: tf.Tensor | None = None,
past_key_value: Tuple[Tuple[tf.Tensor]] | None = None,
attention_mask: tf.Tensor | None = None,
layer_head_mask: tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Tuple[tf.Tensor, tf.Tensor | None]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, embed_dim = shape_list(hidden_states)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = tf.concat([past_key_value[0], key_states], axis=2)
value_states = tf.concat([past_key_value[1], value_states], axis=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = tf.reshape(self._shape(query_states, tgt_len, bsz), proj_shape)
key_states = tf.reshape(key_states, proj_shape)
value_states = tf.reshape(value_states, proj_shape)
src_len = shape_list(key_states)[1]
attn_weights = tf.matmul(query_states, key_states, transpose_b=True)
tf.debugging.assert_equal(
shape_list(attn_weights),
[bsz * self.num_heads, tgt_len, src_len],
message=(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {shape_list(attn_weights)}"
),
)
if attention_mask is not None:
tf.debugging.assert_equal(
shape_list(attention_mask),
[bsz, 1, tgt_len, src_len],
message=(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {shape_list(attention_mask)}"
),
)
attention_mask = tf.cast(attention_mask, dtype=attn_weights.dtype)
attn_weights = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len)) + attention_mask
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_weights = stable_softmax(attn_weights, axis=-1)
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
attn_weights = tf.reshape(layer_head_mask, (1, -1, 1, 1)) * tf.reshape(
attn_weights, (bsz, self.num_heads, tgt_len, src_len)
)
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_probs = self.dropout(attn_weights, training=training)
attn_output = tf.matmul(attn_probs, value_states)
tf.debugging.assert_equal(
shape_list(attn_output),
[bsz * self.num_heads, tgt_len, self.head_dim],
message=(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {shape_list(attn_output)}"
),
)
attn_output = tf.transpose(
tf.reshape(attn_output, (bsz, self.num_heads, tgt_len, self.head_dim)), (0, 2, 1, 3)
)
attn_output = tf.reshape(attn_output, (bsz, tgt_len, embed_dim))
attn_output = self.out_proj(attn_output)
attn_weights: tf.Tensor = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len))
return attn_output, attn_weights, past_key_value
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2FeedForward with Wav2Vec2->Hubert
class TFHubertFeedForward(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.intermediate_dropout = tf.keras.layers.Dropout(config.activation_dropout)
self.intermediate_dense = tf.keras.layers.Dense(
units=config.intermediate_size,
kernel_initializer=get_initializer(config.initializer_range),
bias_initializer="zeros",
name="intermediate_dense",
)
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
self.output_dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
bias_initializer="zeros",
name="output_dense",
)
self.output_dropout = tf.keras.layers.Dropout(config.hidden_dropout)
def call(self, hidden_states: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.intermediate_dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.intermediate_dropout(hidden_states, training=training)
hidden_states = self.output_dense(hidden_states)
hidden_states = self.output_dropout(hidden_states, training=training)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2EncoderLayer with Wav2Vec2->Hubert
class TFHubertEncoderLayer(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.attention = TFHubertAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
name="attention",
)
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout)
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.feed_forward = TFHubertFeedForward(config, name="feed_forward")
self.final_layer_norm = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="final_layer_norm"
)
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
attn_residual = hidden_states
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, training=training
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = attn_residual + hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states + self.feed_forward(hidden_states)
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2EncoderLayerStableLayerNorm with Wav2Vec2->Hubert
class TFHubertEncoderLayerStableLayerNorm(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.attention = TFHubertAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
name="attention",
)
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout)
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.feed_forward = TFHubertFeedForward(config, name="feed_forward")
self.final_layer_norm = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="final_layer_norm"
)
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
attn_residual = hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, training=training
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = attn_residual + hidden_states
hidden_states = hidden_states + self.feed_forward(self.final_layer_norm(hidden_states))
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2Encoder with Wav2Vec2->Hubert
class TFHubertEncoder(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.pos_conv_embed = TFHubertPositionalConvEmbedding(config, name="pos_conv_embed")
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout)
self.layer = [TFHubertEncoderLayer(config, name=f"layers.{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
hidden_states = hidden_states * tf.expand_dims(attention_mask, -1)
attention_mask = _expand_mask(attention_mask)
else:
attention_mask = None
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = np.random.uniform(0, 1)
if training and (dropout_probability < self.config.layerdrop): # skip the layer
continue
layer_outputs = layer_module(
hidden_states=hidden_states,
attention_mask=attention_mask,
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
# Copied from transformers.models.wav2vec2.modeling_tf_wav2vec2.TFWav2Vec2EncoderStableLayerNorm with Wav2Vec2->Hubert
class TFHubertEncoderStableLayerNorm(tf.keras.layers.Layer):
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.pos_conv_embed = TFHubertPositionalConvEmbedding(config, name="pos_conv_embed")
self.layer_norm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout)
self.layer = [
TFHubertEncoderLayerStableLayerNorm(config, name=f"layers.{i}") for i in range(config.num_hidden_layers)
]
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
hidden_states = hidden_states * tf.expand_dims(attention_mask, -1)
attention_mask = _expand_mask(attention_mask)
else:
attention_mask = None
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.dropout(hidden_states, training=training)
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = np.random.uniform(0, 1)
if training and (dropout_probability < self.config.layerdrop): # skip the layer
continue
layer_outputs = layer_module(
hidden_states=hidden_states,
attention_mask=attention_mask,
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
hidden_states = self.layer_norm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
@keras_serializable
class TFHubertMainLayer(tf.keras.layers.Layer):
config_class = HubertConfig
def __init__(self, config: HubertConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.feature_extractor = TFHubertFeatureEncoder(config, name="feature_extractor")
self.feature_projection = TFHubertFeatureProjection(config, name="feature_projection")
if config.do_stable_layer_norm:
self.encoder = TFHubertEncoderStableLayerNorm(config, name="encoder")
else:
self.encoder = TFHubertEncoder(config, name="encoder")
def build(self, input_shape: tf.TensorShape):
self.masked_spec_embed = self.add_weight(
shape=(self.config.hidden_size,), initializer="uniform", trainable=True, name="masked_spec_embed"
)
super().build(input_shape)
def _get_feat_extract_output_lengths(self, input_lengths: tf.Tensor):
"""
Computes the output length of the convolutional layers
"""
def _conv_out_length(input_length, kernel_size, stride):
# 1D convolutional layer output length formula taken
# from https://pytorch.org/docs/stable/generated/torch.nn.Conv1d.html
return (input_length - kernel_size) // stride + 1
for kernel_size, stride in zip(self.config.conv_kernel, self.config.conv_stride):
input_lengths = _conv_out_length(input_lengths, kernel_size, stride)
return input_lengths
def _mask_hidden_states(self, hidden_states: tf.Tensor, mask_time_indices: tf.Tensor | None = None):
"""
Masks extracted features along time axis and/or along feature axis according to
[SpecAugment](https://arxiv.org/abs/1904.08779).
"""
batch_size, sequence_length, hidden_size = shape_list(hidden_states)
# `config.apply_spec_augment` can set masking to False
if not getattr(self.config, "apply_spec_augment", True):
return hidden_states
if mask_time_indices is not None:
# apply SpecAugment along time axis with given mask_time_indices
hidden_states = tf.where(
tf.cast(mask_time_indices[:, :, tf.newaxis], tf.bool),
self.masked_spec_embed[tf.newaxis, tf.newaxis, :],
hidden_states,
)
elif self.config.mask_time_prob > 0:
# generate indices & apply SpecAugment along time axis
mask_time_indices = _compute_mask_indices(
(batch_size, sequence_length),
mask_prob=self.config.mask_time_prob,
mask_length=self.config.mask_time_length,
min_masks=2,
)
hidden_states = tf.where(
tf.cast(mask_time_indices[:, :, tf.newaxis], tf.bool),
self.masked_spec_embed[tf.newaxis, tf.newaxis, :],
hidden_states,
)
# apply SpecAugment along feature axis
if self.config.mask_feature_prob > 0:
mask_feature_indices = _compute_mask_indices(
(batch_size, hidden_size),
mask_prob=self.config.mask_feature_prob,
mask_length=self.config.mask_feature_length,
)
hidden_states = tf.where(mask_feature_indices[:, tf.newaxis, :], hidden_states, 0)
return hidden_states
@unpack_inputs
def call(
self,
input_values: tf.Tensor,
attention_mask: tf.Tensor | None = None,
token_type_ids: tf.Tensor | None = None,
position_ids: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: tf.Tensor | None = None,
output_hidden_states: tf.Tensor | None = None,
return_dict: Optional[bool] = None,
training: bool = False,
**kwargs: Any,
):
hidden_states = self.feature_extractor(tf.cast(input_values, tf.float32), training=training)
if attention_mask is not None:
# compute real output lengths according to convolution formula
output_lengths = self._get_feat_extract_output_lengths(tf.reduce_sum(attention_mask, -1))
attention_mask = tf.sequence_mask(
output_lengths, maxlen=shape_list(hidden_states)[1], dtype=hidden_states.dtype
)
hidden_states = self.feature_projection(hidden_states, training=training)
mask_time_indices = kwargs.get("mask_time_indices", None)
if training:
hidden_states = self._mask_hidden_states(hidden_states, mask_time_indices=mask_time_indices)
encoder_outputs = self.encoder(
hidden_states,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = encoder_outputs[0]
if not return_dict:
return (hidden_states,) + encoder_outputs[1:]
return TFBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class TFHubertPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = HubertConfig
base_model_prefix = "hubert"
main_input_name = "input_values"
@property
def input_signature(self):
return {
"input_values": tf.TensorSpec((None, 16000), tf.float32, name="input_values"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
"token_type_ids": tf.TensorSpec((None, None), tf.int32, name="token_type_ids"),
}
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
logger.warning(
f"\n{self.__class__.__name__} has backpropagation operations that are NOT supported on CPU. If you wish "
"to train/fine-tune this model, you need a GPU or a TPU"
)
HUBERT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_values` only and nothing else: `model(input_values)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_values, attention_mask])` or `model([input_values, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_values": input_values, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Args:
config ([`HubertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
HUBERT_INPUTS_DOCSTRING = r"""
Args:
input_values (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` `Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`np.ndarray` or `tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`np.ndarray` or `tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_values` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_values` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare TFHubert Model transformer outputing raw hidden-states without any specific head on top.",
HUBERT_START_DOCSTRING,
)
class TFHubertModel(TFHubertPreTrainedModel):
def __init__(self, config: HubertConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.config = config
self.hubert = TFHubertMainLayer(config, name="hubert")
@add_start_docstrings_to_model_forward(HUBERT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFBaseModelOutput, config_class=_CONFIG_FOR_DOC)
@unpack_inputs
def call(
self,
input_values: tf.Tensor,
attention_mask: tf.Tensor | None = None,
token_type_ids: tf.Tensor | None = None,
position_ids: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutput, Tuple[tf.Tensor]]:
"""
Returns:
Example:
```python
>>> from transformers import AutoProcessor, TFHubertModel
>>> from datasets import load_dataset
>>> import soundfile as sf
>>> processor = AutoProcessor.from_pretrained("facebook/hubert-large-ls960-ft")
>>> model = TFHubertModel.from_pretrained("facebook/hubert-large-ls960-ft")
>>> def map_to_array(batch):
... speech, _ = sf.read(batch["file"])
... batch["speech"] = speech
... return batch
>>> ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean", split="validation")
>>> ds = ds.map(map_to_array)
>>> input_values = processor(ds["speech"][0], return_tensors="tf").input_values # Batch size 1
>>> hidden_states = model(input_values).last_hidden_state
```"""
output_hidden_states = output_hidden_states if output_hidden_states else self.config.output_hidden_states
output_attentions = output_attentions if output_attentions else self.config.output_attentions
return_dict = return_dict if return_dict else self.config.return_dict
outputs = self.hubert(
input_values=input_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(
"""TFHubert Model with a `language modeling` head on top for Connectionist Temporal Classification (CTC).""",
HUBERT_START_DOCSTRING,
)
class TFHubertForCTC(TFHubertPreTrainedModel):
def __init__(self, config: HubertConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.hubert = TFHubertMainLayer(config, name="hubert")
self.dropout = tf.keras.layers.Dropout(config.final_dropout)
self.lm_head = tf.keras.layers.Dense(config.vocab_size, name="lm_head")
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameters will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5. "
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.hubert.feature_extractor.trainable = False
@add_start_docstrings_to_model_forward(HUBERT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFCausalLMOutput, config_class=_CONFIG_FOR_DOC)
@unpack_inputs
def call(
self,
input_values: tf.Tensor,
attention_mask: tf.Tensor | None = None,
token_type_ids: tf.Tensor | None = None,
position_ids: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
inputs_embeds: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
labels: tf.Tensor | None = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFCausalLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` or `np.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_values` docstring) Tokens with indices set to `-100` are ignored (masked),
the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> import tensorflow as tf
>>> from transformers import AutoProcessor, TFHubertForCTC
>>> from datasets import load_dataset
>>> import soundfile as sf
>>> processor = AutoProcessor.from_pretrained("facebook/hubert-large-ls960-ft")
>>> model = TFHubertForCTC.from_pretrained("facebook/hubert-large-ls960-ft")
>>> def map_to_array(batch):
... speech, _ = sf.read(batch["file"])
... batch["speech"] = speech
... return batch
>>> ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean", split="validation")
>>> ds = ds.map(map_to_array)
>>> input_values = processor(ds["speech"][0], return_tensors="tf").input_values # Batch size 1
>>> logits = model(input_values).logits
>>> predicted_ids = tf.argmax(logits, axis=-1)
>>> transcription = processor.decode(predicted_ids[0])
>>> # compute loss
>>> target_transcription = "A MAN SAID TO THE UNIVERSE SIR I EXIST"
>>> # Pass the transcription as text to encode labels
>>> labels = processor(text=transcription, return_tensors="tf").input_values
>>> loss = model(input_values, labels=labels).loss
```"""
outputs = self.hubert(
input_values=input_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = outputs[0]
hidden_states = self.dropout(hidden_states, training=training)
logits = self.lm_head(hidden_states)
if labels is not None:
if tf.reduce_max(labels) >= self.config.vocab_size:
raise ValueError(f"Label values must be <= vocab_size: {self.config.vocab_size}")
attention_mask = (
attention_mask if attention_mask is not None else tf.ones_like(input_values, dtype=tf.float32)
)
input_lengths = self.hubert._get_feat_extract_output_lengths(tf.reduce_sum(attention_mask, axis=-1))
# assuming that padded tokens are filled with -100
# when not being attended to
labels_mask = tf.cast(labels >= 0, tf.int32)
target_lengths = tf.reduce_sum(labels_mask, axis=-1)
loss = tf.nn.ctc_loss(
logits=logits,
labels=labels,
logit_length=input_lengths,
label_length=target_lengths,
blank_index=self.config.pad_token_id,
logits_time_major=False,
)
if self.config.ctc_loss_reduction == "sum":
loss = tf.reduce_sum(loss)
loss = tf.reshape(loss, (1,))
if self.config.ctc_loss_reduction == "mean":
loss = tf.reduce_mean(loss)
loss = tf.reshape(loss, (1,))
else:
loss = None
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFCausalLMOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {"configuration_hubert": ["HUBERT_PRETRAINED_CONFIG_ARCHIVE_MAP", "HubertConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_hubert"] = [
"HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"HubertForCTC",
"HubertForSequenceClassification",
"HubertModel",
"HubertPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_hubert"] = [
"TF_HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFHubertForCTC",
"TFHubertModel",
"TFHubertPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_hubert import HUBERT_PRETRAINED_CONFIG_ARCHIVE_MAP, HubertConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_hubert import (
HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
HubertForCTC,
HubertForSequenceClassification,
HubertModel,
HubertPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_hubert import (
TF_HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFHubertForCTC,
TFHubertModel,
TFHubertPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/convert_hubert_original_s3prl_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Hubert checkpoint."""
import argparse
import torch
from transformers import HubertConfig, HubertForSequenceClassification, Wav2Vec2FeatureExtractor, logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SUPPORTED_MODELS = ["UtteranceLevel"]
@torch.no_grad()
def convert_s3prl_checkpoint(base_model_name, config_path, checkpoint_path, model_dump_path):
"""
Copy/paste/tweak model's weights to transformers design.
"""
checkpoint = torch.load(checkpoint_path, map_location="cpu")
if checkpoint["Config"]["downstream_expert"]["modelrc"]["select"] not in SUPPORTED_MODELS:
raise NotImplementedError(f"The supported s3prl models are {SUPPORTED_MODELS}")
downstream_dict = checkpoint["Downstream"]
hf_congfig = HubertConfig.from_pretrained(config_path)
hf_model = HubertForSequenceClassification.from_pretrained(base_model_name, config=hf_congfig)
hf_feature_extractor = Wav2Vec2FeatureExtractor.from_pretrained(
base_model_name, return_attention_mask=True, do_normalize=False
)
if hf_congfig.use_weighted_layer_sum:
hf_model.layer_weights.data = checkpoint["Featurizer"]["weights"]
hf_model.projector.weight.data = downstream_dict["projector.weight"]
hf_model.projector.bias.data = downstream_dict["projector.bias"]
hf_model.classifier.weight.data = downstream_dict["model.post_net.linear.weight"]
hf_model.classifier.bias.data = downstream_dict["model.post_net.linear.bias"]
hf_feature_extractor.save_pretrained(model_dump_path)
hf_model.save_pretrained(model_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument(
"--base_model_name", default=None, type=str, help="Name of the huggingface pretrained base model."
)
parser.add_argument("--config_path", default=None, type=str, help="Path to the huggingface classifier config.")
parser.add_argument("--checkpoint_path", default=None, type=str, help="Path to the s3prl checkpoint.")
parser.add_argument("--model_dump_path", default=None, type=str, help="Path to the final converted model.")
args = parser.parse_args()
convert_s3prl_checkpoint(args.base_model_name, args.config_path, args.checkpoint_path, args.model_dump_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/configuration_hubert.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Hubert model configuration"""
import functools
import operator
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
HUBERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/hubert-base-ls960": "https://huggingface.co/facebook/hubert-base-ls960/resolve/main/config.json",
# See all Hubert models at https://huggingface.co/models?filter=hubert
}
class HubertConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`HubertModel`]. It is used to instantiate an
Hubert model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the Hubert
[facebook/hubert-base-ls960](https://huggingface.co/facebook/hubert-base-ls960) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 32):
Vocabulary size of the Hubert model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`HubertModel`]. Vocabulary size of the model. Defines the different
tokens that can be represented by the *inputs_ids* passed to the forward method of [`HubertModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout(`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
activation_dropout (`float`, *optional*, defaults to 0.1):
The dropout ratio for activations inside the fully connected layer.
attention_dropout(`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
final_dropout (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for the final projection layer of [`Wav2Vec2ForCTC`].
layerdrop (`float`, *optional*, defaults to 0.1):
The LayerDrop probability. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556) for more
details.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
feat_extract_norm (`str`, *optional*, defaults to `"group"`):
The norm to be applied to 1D convolutional layers in feature encoder. One of `"group"` for group
normalization of only the first 1D convolutional layer or `"layer"` for layer normalization of all 1D
convolutional layers.
feat_proj_dropout (`float`, *optional*, defaults to 0.0):
The dropout probability for output of the feature encoder.
feat_proj_layer_norm (`bool`, *optional*, defaults to `True`):
Whether to apply LayerNorm to the output of the feature encoder.
feat_extract_activation (`str, `optional`, defaults to `"gelu"`):
The non-linear activation function (function or string) in the 1D convolutional layers of the feature
extractor. If string, `"gelu"`, `"relu"`, `"selu"` and `"gelu_new"` are supported.
conv_dim (`Tuple[int]`, *optional*, defaults to `(512, 512, 512, 512, 512, 512, 512)`):
A tuple of integers defining the number of input and output channels of each 1D convolutional layer in the
feature encoder. The length of *conv_dim* defines the number of 1D convolutional layers.
conv_stride (`Tuple[int]`, *optional*, defaults to `(5, 2, 2, 2, 2, 2, 2)`):
A tuple of integers defining the stride of each 1D convolutional layer in the feature encoder. The length
of *conv_stride* defines the number of convolutional layers and has to match the length of *conv_dim*.
conv_kernel (`Tuple[int]`, *optional*, defaults to `(10, 3, 3, 3, 3, 3, 3)`):
A tuple of integers defining the kernel size of each 1D convolutional layer in the feature encoder. The
length of *conv_kernel* defines the number of convolutional layers and has to match the length of
*conv_dim*.
conv_bias (`bool`, *optional*, defaults to `False`):
Whether the 1D convolutional layers have a bias.
num_conv_pos_embeddings (`int`, *optional*, defaults to 128):
Number of convolutional positional embeddings. Defines the kernel size of 1D convolutional positional
embeddings layer.
num_conv_pos_embedding_groups (`int`, *optional*, defaults to 16):
Number of groups of 1D convolutional positional embeddings layer.
do_stable_layer_norm (`bool`, *optional*, defaults to `False`):
Whether do apply *stable* layer norm architecture of the Transformer encoder. `do_stable_layer_norm is
True` corresponds to applying layer norm before the attention layer, whereas `do_stable_layer_norm is
False` corresponds to applying layer norm after the attention layer.
apply_spec_augment (`bool`, *optional*, defaults to `True`):
Whether to apply *SpecAugment* data augmentation to the outputs of the feature encoder. For reference see
[SpecAugment: A Simple Data Augmentation Method for Automatic Speech
Recognition](https://arxiv.org/abs/1904.08779).
mask_time_prob (`float`, *optional*, defaults to 0.05):
Percentage (between 0 and 1) of all feature vectors along the time axis which will be masked. The masking
procecure generates ''mask_time_prob*len(time_axis)/mask_time_length'' independent masks over the axis. If
reasoning from the propability of each feature vector to be chosen as the start of the vector span to be
masked, *mask_time_prob* should be `prob_vector_start*mask_time_length`. Note that overlap may decrease the
actual percentage of masked vectors. This is only relevant if `apply_spec_augment is True`.
mask_time_length (`int`, *optional*, defaults to 10):
Length of vector span along the time axis.
mask_time_min_masks (`int`, *optional*, defaults to 2),:
The minimum number of masks of length `mask_feature_length` generated along the time axis, each time step,
irrespectively of `mask_feature_prob`. Only relevant if ''mask_time_prob*len(time_axis)/mask_time_length <
mask_time_min_masks''
mask_feature_prob (`float`, *optional*, defaults to 0.0):
Percentage (between 0 and 1) of all feature vectors along the feature axis which will be masked. The
masking procecure generates ''mask_feature_prob*len(feature_axis)/mask_time_length'' independent masks over
the axis. If reasoning from the propability of each feature vector to be chosen as the start of the vector
span to be masked, *mask_feature_prob* should be `prob_vector_start*mask_feature_length`. Note that overlap
may decrease the actual percentage of masked vectors. This is only relevant if `apply_spec_augment is
True`.
mask_feature_length (`int`, *optional*, defaults to 10):
Length of vector span along the feature axis.
mask_feature_min_masks (`int`, *optional*, defaults to 0),:
The minimum number of masks of length `mask_feature_length` generated along the feature axis, each time
step, irrespectively of `mask_feature_prob`. Only relevant if
''mask_feature_prob*len(feature_axis)/mask_feature_length < mask_feature_min_masks''
ctc_loss_reduction (`str`, *optional*, defaults to `"sum"`):
Specifies the reduction to apply to the output of `torch.nn.CTCLoss`. Only relevant when training an
instance of [`HubertForCTC`].
ctc_zero_infinity (`bool`, *optional*, defaults to `False`):
Whether to zero infinite losses and the associated gradients of `torch.nn.CTCLoss`. Infinite losses mainly
occur when the inputs are too short to be aligned to the targets. Only relevant when training an instance
of [`HubertForCTC`].
use_weighted_layer_sum (`bool`, *optional*, defaults to `False`):
Whether to use a weighted average of layer outputs with learned weights. Only relevant when using an
instance of [`HubertForSequenceClassification`].
classifier_proj_size (`int`, *optional*, defaults to 256):
Dimensionality of the projection before token mean-pooling for classification.
Example:
```python
>>> from transformers import HubertModel, HubertConfig
>>> # Initializing a Hubert facebook/hubert-base-ls960 style configuration
>>> configuration = HubertConfig()
>>> # Initializing a model from the facebook/hubert-base-ls960 style configuration
>>> model = HubertModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "hubert"
def __init__(
self,
vocab_size=32,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout=0.1,
activation_dropout=0.1,
attention_dropout=0.1,
feat_proj_layer_norm=True,
feat_proj_dropout=0.0,
final_dropout=0.1,
layerdrop=0.1,
initializer_range=0.02,
layer_norm_eps=1e-5,
feat_extract_norm="group",
feat_extract_activation="gelu",
conv_dim=(512, 512, 512, 512, 512, 512, 512),
conv_stride=(5, 2, 2, 2, 2, 2, 2),
conv_kernel=(10, 3, 3, 3, 3, 2, 2),
conv_bias=False,
num_conv_pos_embeddings=128,
num_conv_pos_embedding_groups=16,
do_stable_layer_norm=False,
apply_spec_augment=True,
mask_time_prob=0.05,
mask_time_length=10,
mask_time_min_masks=2,
mask_feature_prob=0.0,
mask_feature_length=10,
mask_feature_min_masks=0,
ctc_loss_reduction="sum",
ctc_zero_infinity=False,
use_weighted_layer_sum=False,
classifier_proj_size=256,
pad_token_id=0,
bos_token_id=1,
eos_token_id=2,
**kwargs,
):
super().__init__(**kwargs, pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id)
self.hidden_size = hidden_size
self.feat_extract_norm = feat_extract_norm
self.feat_extract_activation = feat_extract_activation
self.conv_dim = list(conv_dim)
self.conv_stride = list(conv_stride)
self.conv_kernel = list(conv_kernel)
self.conv_bias = conv_bias
self.num_conv_pos_embeddings = num_conv_pos_embeddings
self.num_conv_pos_embedding_groups = num_conv_pos_embedding_groups
self.num_feat_extract_layers = len(self.conv_dim)
self.num_hidden_layers = num_hidden_layers
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.num_attention_heads = num_attention_heads
self.hidden_dropout = hidden_dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.feat_proj_layer_norm = feat_proj_layer_norm
self.feat_proj_dropout = feat_proj_dropout
self.final_dropout = final_dropout
self.layerdrop = layerdrop
self.layer_norm_eps = layer_norm_eps
self.initializer_range = initializer_range
self.vocab_size = vocab_size
self.do_stable_layer_norm = do_stable_layer_norm
self.use_weighted_layer_sum = use_weighted_layer_sum
self.classifier_proj_size = classifier_proj_size
if (
(len(self.conv_stride) != self.num_feat_extract_layers)
or (len(self.conv_kernel) != self.num_feat_extract_layers)
or (len(self.conv_dim) != self.num_feat_extract_layers)
):
raise ValueError(
"Configuration for convolutional layers is incorrect. It is required that `len(config.conv_dim)` =="
" `len(config.conv_stride)` == `len(config.conv_kernel)`, but is `len(config.conv_dim) ="
f" {len(self.conv_dim)}`, `len(config.conv_stride) = {len(self.conv_stride)}`,"
f" `len(config.conv_kernel) = {len(self.conv_kernel)}`."
)
# fine-tuning config parameters for SpecAugment: https://arxiv.org/abs/1904.08779
self.apply_spec_augment = apply_spec_augment
self.mask_time_prob = mask_time_prob
self.mask_time_length = mask_time_length
self.mask_time_min_masks = mask_time_min_masks
self.mask_feature_prob = mask_feature_prob
self.mask_feature_length = mask_feature_length
self.mask_feature_min_masks = mask_feature_min_masks
# ctc loss
self.ctc_loss_reduction = ctc_loss_reduction
self.ctc_zero_infinity = ctc_zero_infinity
@property
def inputs_to_logits_ratio(self):
return functools.reduce(operator.mul, self.conv_stride, 1)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/convert_hubert_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Hubert checkpoint."""
import argparse
import json
import os
import fairseq
import torch
from fairseq.data import Dictionary
from transformers import (
HubertConfig,
HubertForCTC,
HubertModel,
Wav2Vec2CTCTokenizer,
Wav2Vec2FeatureExtractor,
Wav2Vec2Processor,
logging,
)
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
MAPPING = {
"post_extract_proj": "feature_projection.projection",
"encoder.pos_conv.0": "encoder.pos_conv_embed.conv",
"self_attn.k_proj": "encoder.layers.*.attention.k_proj",
"self_attn.v_proj": "encoder.layers.*.attention.v_proj",
"self_attn.q_proj": "encoder.layers.*.attention.q_proj",
"self_attn.out_proj": "encoder.layers.*.attention.out_proj",
"self_attn_layer_norm": "encoder.layers.*.layer_norm",
"fc1": "encoder.layers.*.feed_forward.intermediate_dense",
"fc2": "encoder.layers.*.feed_forward.output_dense",
"final_layer_norm": "encoder.layers.*.final_layer_norm",
"encoder.layer_norm": "encoder.layer_norm",
"w2v_model.layer_norm": "feature_projection.layer_norm",
"w2v_encoder.proj": "lm_head",
"mask_emb": "masked_spec_embed",
}
def set_recursively(hf_pointer, key, value, full_name, weight_type):
for attribute in key.split("."):
hf_pointer = getattr(hf_pointer, attribute)
if weight_type is not None:
hf_shape = getattr(hf_pointer, weight_type).shape
else:
hf_shape = hf_pointer.shape
assert hf_shape == value.shape, (
f"Shape of hf {key + '.' + weight_type if weight_type is not None else ''} is {hf_shape}, but should be"
f" {value.shape} for {full_name}"
)
if weight_type == "weight":
hf_pointer.weight.data = value
elif weight_type == "weight_g":
hf_pointer.weight_g.data = value
elif weight_type == "weight_v":
hf_pointer.weight_v.data = value
elif weight_type == "bias":
hf_pointer.bias.data = value
else:
hf_pointer.data = value
logger.info(f"{key + '.' + weight_type if weight_type is not None else ''} was initialized from {full_name}.")
def recursively_load_weights(fairseq_model, hf_model, is_finetuned):
unused_weights = []
fairseq_dict = fairseq_model.state_dict()
feature_extractor = hf_model.hubert.feature_extractor if is_finetuned else hf_model.feature_extractor
for name, value in fairseq_dict.items():
is_used = False
if "conv_layers" in name:
load_conv_layer(
name,
value,
feature_extractor,
unused_weights,
hf_model.config.feat_extract_norm == "group",
)
is_used = True
else:
for key, mapped_key in MAPPING.items():
mapped_key = "hubert." + mapped_key if (is_finetuned and mapped_key != "lm_head") else mapped_key
if key in name or (key.split("w2v_model.")[-1] == name.split(".")[0] and not is_finetuned):
is_used = True
if "*" in mapped_key:
layer_index = name.split(key)[0].split(".")[-2]
mapped_key = mapped_key.replace("*", layer_index)
if "weight_g" in name:
weight_type = "weight_g"
elif "weight_v" in name:
weight_type = "weight_v"
elif "weight" in name:
weight_type = "weight"
elif "bias" in name:
weight_type = "bias"
else:
weight_type = None
set_recursively(hf_model, mapped_key, value, name, weight_type)
continue
if not is_used:
unused_weights.append(name)
logger.warning(f"Unused weights: {unused_weights}")
def load_conv_layer(full_name, value, feature_extractor, unused_weights, use_group_norm):
name = full_name.split("conv_layers.")[-1]
items = name.split(".")
layer_id = int(items[0])
type_id = int(items[1])
if type_id == 0:
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.bias.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.bias.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.bias.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].conv.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor.conv_layers[layer_id].conv.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].conv.weight.data = value
logger.info(f"Feat extract conv layer {layer_id} was initialized from {full_name}.")
elif (type_id == 2 and not use_group_norm) or (type_id == 2 and layer_id == 0 and use_group_norm):
if "bias" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.bias.data.shape, (
f"{full_name} has size {value.shape}, but {feature_extractor[layer_id].layer_norm.bias.data.shape} was"
" found."
)
feature_extractor.conv_layers[layer_id].layer_norm.bias.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
elif "weight" in name:
assert value.shape == feature_extractor.conv_layers[layer_id].layer_norm.weight.data.shape, (
f"{full_name} has size {value.shape}, but"
f" {feature_extractor[layer_id].layer_norm.weight.data.shape} was found."
)
feature_extractor.conv_layers[layer_id].layer_norm.weight.data = value
logger.info(f"Feat extract layer norm weight of layer {layer_id} was initialized from {full_name}.")
else:
unused_weights.append(full_name)
@torch.no_grad()
def convert_hubert_checkpoint(
checkpoint_path, pytorch_dump_folder_path, config_path=None, dict_path=None, is_finetuned=True
):
"""
Copy/paste/tweak model's weights to transformers design.
"""
if config_path is not None:
config = HubertConfig.from_pretrained(config_path)
else:
config = HubertConfig()
if is_finetuned:
if dict_path:
target_dict = Dictionary.load(dict_path)
# important change bos & pad token id since CTC symbol is <pad> and
# not <s> as in fairseq
config.bos_token_id = target_dict.pad_index
config.pad_token_id = target_dict.bos_index
config.eos_token_id = target_dict.eos_index
config.vocab_size = len(target_dict.symbols)
vocab_path = os.path.join(pytorch_dump_folder_path, "vocab.json")
if not os.path.isdir(pytorch_dump_folder_path):
logger.error("--pytorch_dump_folder_path ({}) should be a directory".format(pytorch_dump_folder_path))
return
os.makedirs(pytorch_dump_folder_path, exist_ok=True)
with open(vocab_path, "w", encoding="utf-8") as vocab_handle:
json.dump(target_dict.indices, vocab_handle)
tokenizer = Wav2Vec2CTCTokenizer(
vocab_path,
unk_token=target_dict.unk_word,
pad_token=target_dict.pad_word,
bos_token=target_dict.bos_word,
eos_token=target_dict.eos_word,
word_delimiter_token="|",
do_lower_case=False,
)
return_attention_mask = True if config.feat_extract_norm == "layer" else False
feature_extractor = Wav2Vec2FeatureExtractor(
feature_size=1,
sampling_rate=16000,
padding_value=0,
do_normalize=True,
return_attention_mask=return_attention_mask,
)
processor = Wav2Vec2Processor(feature_extractor=feature_extractor, tokenizer=tokenizer)
processor.save_pretrained(pytorch_dump_folder_path)
hf_wav2vec = HubertForCTC(config)
else:
hf_wav2vec = HubertModel(config)
if is_finetuned:
model, _, _ = fairseq.checkpoint_utils.load_model_ensemble_and_task(
[checkpoint_path], arg_overrides={"data": "/".join(dict_path.split("/")[:-1])}
)
else:
model, _, _ = fairseq.checkpoint_utils.load_model_ensemble_and_task([checkpoint_path])
model = model[0].eval()
recursively_load_weights(model, hf_wav2vec, is_finetuned)
hf_wav2vec.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument("--checkpoint_path", default=None, type=str, help="Path to fairseq checkpoint")
parser.add_argument("--dict_path", default=None, type=str, help="Path to dict of fine-tuned model")
parser.add_argument("--config_path", default=None, type=str, help="Path to hf config.json of model to convert")
parser.add_argument(
"--not_finetuned", action="store_true", help="Whether the model to convert is a fine-tuned model or not"
)
args = parser.parse_args()
convert_hubert_checkpoint(
args.checkpoint_path, args.pytorch_dump_folder_path, args.config_path, args.dict_path, not args.not_finetuned
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/hubert/modeling_hubert.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and the HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Hubert model."""
import warnings
from typing import Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...integrations.deepspeed import is_deepspeed_zero3_enabled
from ...modeling_outputs import BaseModelOutput, CausalLMOutput, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_hubert import HubertConfig
logger = logging.get_logger(__name__)
_HIDDEN_STATES_START_POSITION = 1
# General docstring
_CONFIG_FOR_DOC = "HubertConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "facebook/hubert-large-ls960-ft"
_EXPECTED_OUTPUT_SHAPE = [1, 292, 768]
# CTC docstring
_CTC_EXPECTED_OUTPUT = "'MISTER QUILTER IS THE APOSTLE OF THE MIDDLE CLASSES AND WE ARE GLAD TO WELCOME HIS GOSPEL'"
_CTC_EXPECTED_LOSS = 22.68
# Audio class docstring
_SEQ_CLASS_CHECKPOINT = "superb/hubert-base-superb-ks"
_SEQ_CLASS_EXPECTED_OUTPUT = "'_unknown_'"
_SEQ_CLASS_EXPECTED_LOSS = 8.53
HUBERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/hubert-base-ls960",
# See all Hubert models at https://huggingface.co/models?filter=hubert
]
# Copied from transformers.models.wav2vec2.modeling_wav2vec2._compute_mask_indices
def _compute_mask_indices(
shape: Tuple[int, int],
mask_prob: float,
mask_length: int,
attention_mask: Optional[torch.LongTensor] = None,
min_masks: int = 0,
) -> np.ndarray:
"""
Computes random mask spans for a given shape. Used to implement [SpecAugment: A Simple Data Augmentation Method for
ASR](https://arxiv.org/abs/1904.08779). Note that this method is not optimized to run on TPU and should be run on
CPU as part of the preprocessing during training.
Args:
shape: The shape for which to compute masks. This should be of a tuple of size 2 where
the first element is the batch size and the second element is the length of the axis to span.
mask_prob: The percentage of the whole axis (between 0 and 1) which will be masked. The number of
independently generated mask spans of length `mask_length` is computed by
`mask_prob*shape[1]/mask_length`. Note that due to overlaps, `mask_prob` is an upper bound and the
actual percentage will be smaller.
mask_length: size of the mask
min_masks: minimum number of masked spans
attention_mask: A (right-padded) attention mask which independently shortens the feature axis of
each batch dimension.
"""
batch_size, sequence_length = shape
if mask_length < 1:
raise ValueError("`mask_length` has to be bigger than 0.")
if mask_length > sequence_length:
raise ValueError(
f"`mask_length` has to be smaller than `sequence_length`, but got `mask_length`: {mask_length}"
f" and `sequence_length`: {sequence_length}`"
)
# epsilon is used for probabilistic rounding
epsilon = np.random.rand(1).item()
def compute_num_masked_span(input_length):
"""Given input length, compute how many spans should be masked"""
num_masked_span = int(mask_prob * input_length / mask_length + epsilon)
num_masked_span = max(num_masked_span, min_masks)
# make sure num masked span <= sequence_length
if num_masked_span * mask_length > sequence_length:
num_masked_span = sequence_length // mask_length
# make sure num_masked span is also <= input_length - (mask_length - 1)
if input_length - (mask_length - 1) < num_masked_span:
num_masked_span = max(input_length - (mask_length - 1), 0)
return num_masked_span
# compute number of masked spans in batch
input_lengths = (
attention_mask.sum(-1).detach().tolist()
if attention_mask is not None
else [sequence_length for _ in range(batch_size)]
)
# SpecAugment mask to fill
spec_aug_mask = np.zeros((batch_size, sequence_length), dtype=bool)
spec_aug_mask_idxs = []
max_num_masked_span = compute_num_masked_span(sequence_length)
if max_num_masked_span == 0:
return spec_aug_mask
for input_length in input_lengths:
# compute num of masked spans for this input
num_masked_span = compute_num_masked_span(input_length)
# get random indices to mask
spec_aug_mask_idx = np.random.choice(
np.arange(input_length - (mask_length - 1)), num_masked_span, replace=False
)
# pick first sampled index that will serve as a dummy index to pad vector
# to ensure same dimension for all batches due to probabilistic rounding
# Picking first sample just pads those vectors twice.
if len(spec_aug_mask_idx) == 0:
# this case can only happen if `input_length` is strictly smaller then
# `sequence_length` in which case the last token has to be a padding
# token which we can use as a dummy mask id
dummy_mask_idx = sequence_length - 1
else:
dummy_mask_idx = spec_aug_mask_idx[0]
spec_aug_mask_idx = np.concatenate(
[spec_aug_mask_idx, np.ones(max_num_masked_span - num_masked_span, dtype=np.int32) * dummy_mask_idx]
)
spec_aug_mask_idxs.append(spec_aug_mask_idx)
spec_aug_mask_idxs = np.array(spec_aug_mask_idxs)
# expand masked indices to masked spans
spec_aug_mask_idxs = np.broadcast_to(
spec_aug_mask_idxs[:, :, None], (batch_size, max_num_masked_span, mask_length)
)
spec_aug_mask_idxs = spec_aug_mask_idxs.reshape(batch_size, max_num_masked_span * mask_length)
# add offset to the starting indexes so that indexes now create a span
offsets = np.arange(mask_length)[None, None, :]
offsets = np.broadcast_to(offsets, (batch_size, max_num_masked_span, mask_length)).reshape(
batch_size, max_num_masked_span * mask_length
)
spec_aug_mask_idxs = spec_aug_mask_idxs + offsets
# ensure that we cannot have indices larger than sequence_length
if spec_aug_mask_idxs.max() > sequence_length - 1:
spec_aug_mask_idxs[spec_aug_mask_idxs > sequence_length - 1] = sequence_length - 1
# scatter indices to mask
np.put_along_axis(spec_aug_mask, spec_aug_mask_idxs, 1, -1)
return spec_aug_mask
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2NoLayerNormConvLayer with Wav2Vec2->Hubert
class HubertNoLayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2LayerNormConvLayer with Wav2Vec2->Hubert
class HubertLayerNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.layer_norm = nn.LayerNorm(self.out_conv_dim, elementwise_affine=True)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states.transpose(-2, -1)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2GroupNormConvLayer with Wav2Vec2->Hubert
class HubertGroupNormConvLayer(nn.Module):
def __init__(self, config, layer_id=0):
super().__init__()
self.in_conv_dim = config.conv_dim[layer_id - 1] if layer_id > 0 else 1
self.out_conv_dim = config.conv_dim[layer_id]
self.conv = nn.Conv1d(
self.in_conv_dim,
self.out_conv_dim,
kernel_size=config.conv_kernel[layer_id],
stride=config.conv_stride[layer_id],
bias=config.conv_bias,
)
self.activation = ACT2FN[config.feat_extract_activation]
self.layer_norm = nn.GroupNorm(num_groups=self.out_conv_dim, num_channels=self.out_conv_dim, affine=True)
def forward(self, hidden_states):
hidden_states = self.conv(hidden_states)
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2PositionalConvEmbedding with Wav2Vec2->Hubert
class HubertPositionalConvEmbedding(nn.Module):
def __init__(self, config):
super().__init__()
self.conv = nn.Conv1d(
config.hidden_size,
config.hidden_size,
kernel_size=config.num_conv_pos_embeddings,
padding=config.num_conv_pos_embeddings // 2,
groups=config.num_conv_pos_embedding_groups,
)
weight_norm = nn.utils.weight_norm
if hasattr(nn.utils.parametrizations, "weight_norm"):
weight_norm = nn.utils.parametrizations.weight_norm
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(self.conv.weight, modifier_rank=0):
self.conv = weight_norm(self.conv, name="weight", dim=2)
deepspeed.zero.register_external_parameter(self, self.conv.weight_v)
deepspeed.zero.register_external_parameter(self, self.conv.weight_g)
else:
self.conv = weight_norm(self.conv, name="weight", dim=2)
self.padding = HubertSamePadLayer(config.num_conv_pos_embeddings)
self.activation = ACT2FN[config.feat_extract_activation]
def forward(self, hidden_states):
hidden_states = hidden_states.transpose(1, 2)
hidden_states = self.conv(hidden_states)
hidden_states = self.padding(hidden_states)
hidden_states = self.activation(hidden_states)
hidden_states = hidden_states.transpose(1, 2)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2SamePadLayer with Wav2Vec2->Hubert
class HubertSamePadLayer(nn.Module):
def __init__(self, num_conv_pos_embeddings):
super().__init__()
self.num_pad_remove = 1 if num_conv_pos_embeddings % 2 == 0 else 0
def forward(self, hidden_states):
if self.num_pad_remove > 0:
hidden_states = hidden_states[:, :, : -self.num_pad_remove]
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeatureEncoder with Wav2Vec2->Hubert
class HubertFeatureEncoder(nn.Module):
"""Construct the features from raw audio waveform"""
def __init__(self, config):
super().__init__()
if config.feat_extract_norm == "group":
conv_layers = [HubertGroupNormConvLayer(config, layer_id=0)] + [
HubertNoLayerNormConvLayer(config, layer_id=i + 1) for i in range(config.num_feat_extract_layers - 1)
]
elif config.feat_extract_norm == "layer":
conv_layers = [HubertLayerNormConvLayer(config, layer_id=i) for i in range(config.num_feat_extract_layers)]
else:
raise ValueError(
f"`config.feat_extract_norm` is {config.feat_extract_norm}, but has to be one of ['group', 'layer']"
)
self.conv_layers = nn.ModuleList(conv_layers)
self.gradient_checkpointing = False
self._requires_grad = True
def _freeze_parameters(self):
for param in self.parameters():
param.requires_grad = False
self._requires_grad = False
def forward(self, input_values):
hidden_states = input_values[:, None]
# make sure hidden_states require grad for gradient_checkpointing
if self._requires_grad and self.training:
hidden_states.requires_grad = True
for conv_layer in self.conv_layers:
if self._requires_grad and self.gradient_checkpointing and self.training:
hidden_states = self._gradient_checkpointing_func(
conv_layer.__call__,
hidden_states,
)
else:
hidden_states = conv_layer(hidden_states)
return hidden_states
class HubertFeatureExtractor(HubertFeatureEncoder):
def __init__(self, config):
super().__init__(config)
warnings.warn(
f"The class `{self.__class__.__name__}` has been depreciated "
"and will be removed in Transformers v5. "
f"Use `{self.__class__.__bases__[0].__name__}` instead.",
FutureWarning,
)
class HubertFeatureProjection(nn.Module):
def __init__(self, config):
super().__init__()
self.feat_proj_layer_norm = config.feat_proj_layer_norm
if self.feat_proj_layer_norm:
self.layer_norm = nn.LayerNorm(config.conv_dim[-1], eps=config.layer_norm_eps)
self.projection = nn.Linear(config.conv_dim[-1], config.hidden_size)
self.dropout = nn.Dropout(config.feat_proj_dropout)
def forward(self, hidden_states):
# non-projected hidden states are needed for quantization
if self.feat_proj_layer_norm:
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.projection(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Copied from transformers.models.bart.modeling_bart.BartAttention with Bart->Hubert
class HubertAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
is_causal: bool = False,
config: Optional[HubertConfig] = None,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
self.config = config
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.is_causal = is_causal
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
# `past_key_value[0].shape[2] == key_value_states.shape[1]`
# is checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
if (
is_cross_attention
and past_key_value is not None
and past_key_value[0].shape[2] == key_value_states.shape[1]
):
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.reshape(*proj_shape)
value_states = value_states.reshape(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz * self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned across GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2FeedForward with Wav2Vec2->Hubert
class HubertFeedForward(nn.Module):
def __init__(self, config):
super().__init__()
self.intermediate_dropout = nn.Dropout(config.activation_dropout)
self.intermediate_dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
self.output_dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.output_dropout = nn.Dropout(config.hidden_dropout)
def forward(self, hidden_states):
hidden_states = self.intermediate_dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.intermediate_dropout(hidden_states)
hidden_states = self.output_dense(hidden_states)
hidden_states = self.output_dropout(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderLayer with Wav2Vec2->Hubert
class HubertEncoderLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = HubertAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = HubertFeedForward(config)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states, attention_mask=None, output_attentions=False):
attn_residual = hidden_states
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = self.dropout(hidden_states)
hidden_states = attn_residual + hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states = hidden_states + self.feed_forward(hidden_states)
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2AttnAdapterLayer with Wav2Vec2->Hubert
class HubertAttnAdapterLayer(nn.Module):
def __init__(self, config):
"""
Implements adapter modules directly with 3D tensor weight as parameters and without using ModuleList to speed
up training throughput.
"""
super().__init__()
self.input_dim = config.adapter_attn_dim
self.hidden_dim = config.hidden_size
self.norm = nn.LayerNorm(self.hidden_dim)
self.linear_1 = nn.Linear(self.hidden_dim, self.input_dim)
self.act_fn = nn.ReLU()
self.linear_2 = nn.Linear(self.input_dim, self.hidden_dim)
def forward(self, hidden_states: torch.FloatTensor):
hidden_states = self.norm(hidden_states)
hidden_states = self.linear_1(hidden_states)
hidden_states = self.act_fn(hidden_states)
hidden_states = self.linear_2(hidden_states)
return hidden_states
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderLayerStableLayerNorm with Wav2Vec2->Hubert
class HubertEncoderLayerStableLayerNorm(nn.Module):
def __init__(self, config):
super().__init__()
self.attention = HubertAttention(
embed_dim=config.hidden_size,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=False,
)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.feed_forward = HubertFeedForward(config)
self.final_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
if getattr(config, "adapter_attn_dim", None) is not None:
self.adapter_layer = HubertAttnAdapterLayer(config)
else:
self.adapter_layer = None
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
):
attn_residual = hidden_states
hidden_states = self.layer_norm(hidden_states)
hidden_states, attn_weights, _ = self.attention(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = self.dropout(hidden_states)
hidden_states = attn_residual + hidden_states
hidden_states = hidden_states + self.feed_forward(self.final_layer_norm(hidden_states))
if self.adapter_layer is not None:
hidden_states = hidden_states + self.adapter_layer(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2Encoder with Wav2Vec2->Hubert
class HubertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.pos_conv_embed = HubertPositionalConvEmbedding(config)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layers = nn.ModuleList([HubertEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.tensor,
attention_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
# make sure padded tokens output 0
expand_attention_mask = attention_mask.unsqueeze(-1).repeat(1, 1, hidden_states.shape[2])
hidden_states[~expand_attention_mask] = 0
# extend attention_mask
attention_mask = 1.0 - attention_mask[:, None, None, :].to(dtype=hidden_states.dtype)
attention_mask = attention_mask * torch.finfo(hidden_states.dtype).min
attention_mask = attention_mask.expand(
attention_mask.shape[0], 1, attention_mask.shape[-1], attention_mask.shape[-1]
)
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
for layer in self.layers:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = torch.rand([])
skip_the_layer = True if self.training and (dropout_probability < self.config.layerdrop) else False
if not skip_the_layer or deepspeed_zero3_is_enabled:
# under deepspeed zero3 all gpus must run in sync
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer.__call__,
hidden_states,
attention_mask,
output_attentions,
)
else:
layer_outputs = layer(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if skip_the_layer:
layer_outputs = (None, None)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2EncoderStableLayerNorm with Wav2Vec2->Hubert
class HubertEncoderStableLayerNorm(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.pos_conv_embed = HubertPositionalConvEmbedding(config)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout)
self.layers = nn.ModuleList(
[HubertEncoderLayerStableLayerNorm(config) for _ in range(config.num_hidden_layers)]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
if attention_mask is not None:
# make sure padded tokens are not attended to
expand_attention_mask = attention_mask.unsqueeze(-1).repeat(1, 1, hidden_states.shape[2])
hidden_states[~expand_attention_mask] = 0
# extend attention_mask
attention_mask = 1.0 - attention_mask[:, None, None, :].to(dtype=hidden_states.dtype)
attention_mask = attention_mask * torch.finfo(hidden_states.dtype).min
attention_mask = attention_mask.expand(
attention_mask.shape[0], 1, attention_mask.shape[-1], attention_mask.shape[-1]
)
position_embeddings = self.pos_conv_embed(hidden_states)
hidden_states = hidden_states + position_embeddings
hidden_states = self.dropout(hidden_states)
deepspeed_zero3_is_enabled = is_deepspeed_zero3_enabled()
for layer in self.layers:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = torch.rand([])
skip_the_layer = True if self.training and (dropout_probability < self.config.layerdrop) else False
if not skip_the_layer or deepspeed_zero3_is_enabled:
# under deepspeed zero3 all gpus must run in sync
# XXX: could optimize this like synced_gpus in generate_utils but not sure if it's worth the code complication
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer.__call__,
hidden_states,
attention_mask,
output_attentions,
)
else:
layer_outputs = layer(
hidden_states, attention_mask=attention_mask, output_attentions=output_attentions
)
hidden_states = layer_outputs[0]
if skip_the_layer:
layer_outputs = (None, None)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
hidden_states = self.layer_norm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class HubertPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = HubertConfig
base_model_prefix = "hubert"
main_input_name = "input_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
elif isinstance(module, (nn.LayerNorm, nn.GroupNorm)):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Conv1d):
if is_deepspeed_zero3_enabled():
import deepspeed
if hasattr(module, "weight_v") and hasattr(module, "weight_g"):
with deepspeed.zero.GatheredParameters([module.weight_v, module.weight_g], modifier_rank=0):
nn.init.kaiming_normal_(module.weight.data)
else:
with deepspeed.zero.GatheredParameters(module.weight, modifier_rank=0):
nn.init.kaiming_normal_(module.weight.data)
else:
nn.init.kaiming_normal_(module.weight.data)
if isinstance(module, (nn.Linear, nn.Conv1d)) and module.bias is not None:
module.bias.data.zero_()
def _get_feat_extract_output_lengths(self, input_lengths: Union[torch.LongTensor, int]):
"""
Computes the output length of the convolutional layers
"""
def _conv_out_length(input_length, kernel_size, stride):
# 1D convolutional layer output length formula taken
# from https://pytorch.org/docs/stable/generated/torch.nn.Conv1d.html
return torch.div(input_length - kernel_size, stride, rounding_mode="floor") + 1
for kernel_size, stride in zip(self.config.conv_kernel, self.config.conv_stride):
input_lengths = _conv_out_length(input_lengths, kernel_size, stride)
return input_lengths
def _get_feature_vector_attention_mask(self, feature_vector_length: int, attention_mask: torch.LongTensor):
output_lengths = self._get_feat_extract_output_lengths(attention_mask.sum(-1)).to(torch.long)
batch_size = attention_mask.shape[0]
attention_mask = torch.zeros(
(batch_size, feature_vector_length), dtype=attention_mask.dtype, device=attention_mask.device
)
# these two operations makes sure that all values before the output lengths idxs are attended to
attention_mask[(torch.arange(attention_mask.shape[0], device=attention_mask.device), output_lengths - 1)] = 1
attention_mask = attention_mask.flip([-1]).cumsum(-1).flip([-1]).bool()
return attention_mask
HUBERT_START_DOCSTRING = r"""
Hubert was proposed in [HuBERT: Self-Supervised Speech Representation Learning by Masked Prediction of Hidden
Units](https://arxiv.org/abs/2106.07447) by Wei-Ning Hsu, Benjamin Bolte, Yao-Hung Hubert Tsai, Kushal Lakhotia,
Ruslan Salakhutdinov, Abdelrahman Mohamed.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving etc.).
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`HubertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
HUBERT_INPUTS_DOCSTRING = r"""
Args:
input_values (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Float values of input raw speech waveform. Values can be obtained by loading a `.flac` or `.wav` audio file
into an array of type `List[float]` or a `numpy.ndarray`, *e.g.* via the soundfile library (`pip install
soundfile`). To prepare the array into `input_values`, the [`AutoProcessor`] should be used for padding and
conversion into a tensor of type `torch.FloatTensor`. See [`Wav2Vec2Processor.__call__`] for details.
attention_mask (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing convolution and attention on padding token indices. Mask values selected in `[0,
1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
<Tip warning={true}>
`attention_mask` should only be passed if the corresponding processor has `config.return_attention_mask ==
True`. For all models whose processor has `config.return_attention_mask == False`, such as
[hubert-base](https://huggingface.co/facebook/hubert-base-ls960), `attention_mask` should **not** be passed
to avoid degraded performance when doing batched inference. For such models `input_values` should simply be
padded with 0 and passed without `attention_mask`. Be aware that these models also yield slightly different
results depending on whether `input_values` is padded or not.
</Tip>
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Hubert Model transformer outputting raw hidden-states without any specific head on top.",
HUBERT_START_DOCSTRING,
)
class HubertModel(HubertPreTrainedModel):
def __init__(self, config: HubertConfig):
super().__init__(config)
self.config = config
self.feature_extractor = HubertFeatureEncoder(config)
self.feature_projection = HubertFeatureProjection(config)
if config.mask_time_prob > 0.0 or config.mask_feature_prob > 0.0:
self.masked_spec_embed = nn.Parameter(torch.FloatTensor(config.hidden_size).uniform_())
if config.do_stable_layer_norm:
self.encoder = HubertEncoderStableLayerNorm(config)
else:
self.encoder = HubertEncoder(config)
# Initialize weights and apply final processing
self.post_init()
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2Model._mask_hidden_states
def _mask_hidden_states(
self,
hidden_states: torch.FloatTensor,
mask_time_indices: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.LongTensor] = None,
):
"""
Masks extracted features along time axis and/or along feature axis according to
[SpecAugment](https://arxiv.org/abs/1904.08779).
"""
# `config.apply_spec_augment` can set masking to False
if not getattr(self.config, "apply_spec_augment", True):
return hidden_states
# generate indices & apply SpecAugment along time axis
batch_size, sequence_length, hidden_size = hidden_states.size()
if mask_time_indices is not None:
# apply SpecAugment along time axis with given mask_time_indices
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
elif self.config.mask_time_prob > 0 and self.training:
mask_time_indices = _compute_mask_indices(
(batch_size, sequence_length),
mask_prob=self.config.mask_time_prob,
mask_length=self.config.mask_time_length,
attention_mask=attention_mask,
min_masks=self.config.mask_time_min_masks,
)
mask_time_indices = torch.tensor(mask_time_indices, device=hidden_states.device, dtype=torch.bool)
hidden_states[mask_time_indices] = self.masked_spec_embed.to(hidden_states.dtype)
if self.config.mask_feature_prob > 0 and self.training:
# generate indices & apply SpecAugment along feature axis
mask_feature_indices = _compute_mask_indices(
(batch_size, hidden_size),
mask_prob=self.config.mask_feature_prob,
mask_length=self.config.mask_feature_length,
min_masks=self.config.mask_feature_min_masks,
)
mask_feature_indices = torch.tensor(mask_feature_indices, device=hidden_states.device, dtype=torch.bool)
mask_feature_indices = mask_feature_indices[:, None].expand(-1, sequence_length, -1)
hidden_states[mask_feature_indices] = 0
return hidden_states
@add_start_docstrings_to_model_forward(HUBERT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
mask_time_indices: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
"""
Returns:
Example:
```python
>>> from transformers import AutoProcessor, HubertModel
>>> from datasets import load_dataset
>>> import soundfile as sf
>>> processor = AutoProcessor.from_pretrained("facebook/hubert-large-ls960-ft")
>>> model = HubertModel.from_pretrained("facebook/hubert-large-ls960-ft")
>>> def map_to_array(batch):
... speech, _ = sf.read(batch["file"])
... batch["speech"] = speech
... return batch
>>> ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean", split="validation")
>>> ds = ds.map(map_to_array)
>>> input_values = processor(ds["speech"][0], return_tensors="pt").input_values # Batch size 1
>>> hidden_states = model(input_values).last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
extract_features = self.feature_extractor(input_values)
extract_features = extract_features.transpose(1, 2)
if attention_mask is not None:
# compute reduced attention_mask corresponding to feature vectors
attention_mask = self._get_feature_vector_attention_mask(extract_features.shape[1], attention_mask)
hidden_states = self.feature_projection(extract_features)
hidden_states = self._mask_hidden_states(hidden_states, mask_time_indices=mask_time_indices)
encoder_outputs = self.encoder(
hidden_states,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = encoder_outputs[0]
if not return_dict:
return (hidden_states,) + encoder_outputs[1:]
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""Hubert Model with a `language modeling` head on top for Connectionist Temporal Classification (CTC).""",
HUBERT_START_DOCSTRING,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForCTC with Wav2Vec2->Hubert, wav2vec2->hubert, WAV_2_VEC_2->HUBERT
class HubertForCTC(HubertPreTrainedModel):
def __init__(self, config, target_lang: Optional[str] = None):
super().__init__(config)
self.hubert = HubertModel(config)
self.dropout = nn.Dropout(config.final_dropout)
self.target_lang = target_lang
if config.vocab_size is None:
raise ValueError(
f"You are trying to instantiate {self.__class__} with a configuration that "
"does not define the vocabulary size of the language model head. Please "
"instantiate the model as follows: `HubertForCTC.from_pretrained(..., vocab_size=vocab_size)`. "
"or define `vocab_size` of your model's configuration."
)
output_hidden_size = (
config.output_hidden_size if hasattr(config, "add_adapter") and config.add_adapter else config.hidden_size
)
self.lm_head = nn.Linear(output_hidden_size, config.vocab_size)
# Initialize weights and apply final processing
self.post_init()
def tie_weights(self):
"""
This method overwrites [`~PreTrainedModel.tie_weights`] so that adapter weights can be correctly loaded when
passing `target_lang=...` to `from_pretrained(...)`.
This method is **not** supposed to be called by the user and is prone to be changed in the future.
"""
# Note that `tie_weights` is usually used to tie input and output embedding weights. The method is re-purposed to
# correctly load adapter layers for Hubert so that we do not have to introduce a new API to
# [`PreTrainedModel`]. While slightly hacky, Hubert never has to tie input and output embeddings, so that it is
# ok to repurpose this function here.
target_lang = self.target_lang
if target_lang is not None and getattr(self.config, "adapter_attn_dim", None) is None:
raise ValueError(f"Cannot pass `target_lang`: {target_lang} if `config.adapter_attn_dim` is not defined.")
elif target_lang is None and getattr(self.config, "adapter_attn_dim", None) is not None:
logger.info("By default `target_lang` is set to 'eng'.")
elif target_lang is not None:
self.load_adapter(target_lang, force_load=True)
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5. "
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.hubert.feature_extractor._freeze_parameters()
def freeze_base_model(self):
"""
Calling this function will disable the gradient computation for the base model so that its parameters will not
be updated during training. Only the classification head will be updated.
"""
for param in self.hubert.parameters():
param.requires_grad = False
@add_start_docstrings_to_model_forward(HUBERT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_CTC_EXPECTED_OUTPUT,
expected_loss=_CTC_EXPECTED_LOSS,
)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, CausalLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, target_length)`, *optional*):
Labels for connectionist temporal classification. Note that `target_length` has to be smaller or equal to
the sequence length of the output logits. Indices are selected in `[-100, 0, ..., config.vocab_size - 1]`.
All labels set to `-100` are ignored (masked), the loss is only computed for labels in `[0, ...,
config.vocab_size - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.hubert(
input_values,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
hidden_states = self.dropout(hidden_states)
logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
if labels.max() >= self.config.vocab_size:
raise ValueError(f"Label values must be <= vocab_size: {self.config.vocab_size}")
# retrieve loss input_lengths from attention_mask
attention_mask = (
attention_mask if attention_mask is not None else torch.ones_like(input_values, dtype=torch.long)
)
input_lengths = self._get_feat_extract_output_lengths(attention_mask.sum(-1)).to(torch.long)
# assuming that padded tokens are filled with -100
# when not being attended to
labels_mask = labels >= 0
target_lengths = labels_mask.sum(-1)
flattened_targets = labels.masked_select(labels_mask)
# ctc_loss doesn't support fp16
log_probs = nn.functional.log_softmax(logits, dim=-1, dtype=torch.float32).transpose(0, 1)
with torch.backends.cudnn.flags(enabled=False):
loss = nn.functional.ctc_loss(
log_probs,
flattened_targets,
input_lengths,
target_lengths,
blank=self.config.pad_token_id,
reduction=self.config.ctc_loss_reduction,
zero_infinity=self.config.ctc_zero_infinity,
)
if not return_dict:
output = (logits,) + outputs[_HIDDEN_STATES_START_POSITION:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutput(
loss=loss, logits=logits, hidden_states=outputs.hidden_states, attentions=outputs.attentions
)
@add_start_docstrings(
"""
Hubert Model with a sequence classification head on top (a linear layer over the pooled output) for tasks like
SUPERB Keyword Spotting.
""",
HUBERT_START_DOCSTRING,
)
# Copied from transformers.models.wav2vec2.modeling_wav2vec2.Wav2Vec2ForSequenceClassification with Wav2Vec2->Hubert, wav2vec2->hubert, WAV_2_VEC_2->HUBERT
class HubertForSequenceClassification(HubertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
if hasattr(config, "add_adapter") and config.add_adapter:
raise ValueError(
"Sequence classification does not support the use of Hubert adapters (config.add_adapter=True)"
)
self.hubert = HubertModel(config)
num_layers = config.num_hidden_layers + 1 # transformer layers + input embeddings
if config.use_weighted_layer_sum:
self.layer_weights = nn.Parameter(torch.ones(num_layers) / num_layers)
self.projector = nn.Linear(config.hidden_size, config.classifier_proj_size)
self.classifier = nn.Linear(config.classifier_proj_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
def freeze_feature_extractor(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameters will
not be updated during training.
"""
warnings.warn(
"The method `freeze_feature_extractor` is deprecated and will be removed in Transformers v5. "
"Please use the equivalent `freeze_feature_encoder` method instead.",
FutureWarning,
)
self.freeze_feature_encoder()
def freeze_feature_encoder(self):
"""
Calling this function will disable the gradient computation for the feature encoder so that its parameter will
not be updated during training.
"""
self.hubert.feature_extractor._freeze_parameters()
def freeze_base_model(self):
"""
Calling this function will disable the gradient computation for the base model so that its parameters will not
be updated during training. Only the classification head will be updated.
"""
for param in self.hubert.parameters():
param.requires_grad = False
@add_start_docstrings_to_model_forward(HUBERT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_SEQ_CLASS_CHECKPOINT,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
modality="audio",
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_values: Optional[torch.Tensor],
attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[torch.Tensor] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = True if self.config.use_weighted_layer_sum else output_hidden_states
outputs = self.hubert(
input_values,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if self.config.use_weighted_layer_sum:
hidden_states = outputs[_HIDDEN_STATES_START_POSITION]
hidden_states = torch.stack(hidden_states, dim=1)
norm_weights = nn.functional.softmax(self.layer_weights, dim=-1)
hidden_states = (hidden_states * norm_weights.view(-1, 1, 1)).sum(dim=1)
else:
hidden_states = outputs[0]
hidden_states = self.projector(hidden_states)
if attention_mask is None:
pooled_output = hidden_states.mean(dim=1)
else:
padding_mask = self._get_feature_vector_attention_mask(hidden_states.shape[1], attention_mask)
hidden_states[~padding_mask] = 0.0
pooled_output = hidden_states.sum(dim=1) / padding_mask.sum(dim=1).view(-1, 1)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[_HIDDEN_STATES_START_POSITION:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/groupvit/configuration_groupvit.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" GroupViT model configuration"""
import os
from collections import OrderedDict
from typing import TYPE_CHECKING, Any, Mapping, Optional, Union
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
if TYPE_CHECKING:
from ...processing_utils import ProcessorMixin
from ...utils import TensorType
logger = logging.get_logger(__name__)
GROUPVIT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"nvidia/groupvit-gcc-yfcc": "https://huggingface.co/nvidia/groupvit-gcc-yfcc/resolve/main/config.json",
}
class GroupViTTextConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`GroupViTTextModel`]. It is used to instantiate an
GroupViT model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the GroupViT
[nvidia/groupvit-gcc-yfcc](https://huggingface.co/nvidia/groupvit-gcc-yfcc) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 49408):
Vocabulary size of the GroupViT text model. Defines the number of different tokens that can be represented
by the `inputs_ids` passed when calling [`GroupViTModel`].
hidden_size (`int`, *optional*, defaults to 256):
Dimensionality of the encoder layers and the pooler layer.
intermediate_size (`int`, *optional*, defaults to 1024):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 4):
Number of attention heads for each attention layer in the Transformer encoder.
max_position_embeddings (`int`, *optional*, defaults to 77):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
hidden_act (`str` or `function`, *optional*, defaults to `"quick_gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` ``"quick_gelu"` are supported.
layer_norm_eps (`float`, *optional*, defaults to 1e-5):
The epsilon used by the layer normalization layers.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
dropout (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
initializer_factor (`float`, *optional*, defaults to 1.0):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
Example:
```python
>>> from transformers import GroupViTTextConfig, GroupViTTextModel
>>> # Initializing a GroupViTTextModel with nvidia/groupvit-gcc-yfcc style configuration
>>> configuration = GroupViTTextConfig()
>>> model = GroupViTTextModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "groupvit_text_model"
def __init__(
self,
vocab_size=49408,
hidden_size=256,
intermediate_size=1024,
num_hidden_layers=12,
num_attention_heads=4,
max_position_embeddings=77,
hidden_act="quick_gelu",
layer_norm_eps=1e-5,
dropout=0.0,
attention_dropout=0.0,
initializer_range=0.02,
initializer_factor=1.0,
pad_token_id=1,
bos_token_id=49406,
eos_token_id=49407,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.dropout = dropout
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.max_position_embeddings = max_position_embeddings
self.layer_norm_eps = layer_norm_eps
self.hidden_act = hidden_act
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.attention_dropout = attention_dropout
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
cls._set_token_in_kwargs(kwargs)
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
# get the text config dict if we are loading from GroupViTConfig
if config_dict.get("model_type") == "groupvit":
config_dict = config_dict["text_config"]
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
class GroupViTVisionConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`GroupViTVisionModel`]. It is used to instantiate
an GroupViT model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the GroupViT
[nvidia/groupvit-gcc-yfcc](https://huggingface.co/nvidia/groupvit-gcc-yfcc) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 384):
Dimensionality of the encoder layers and the pooler layer.
intermediate_size (`int`, *optional*, defaults to 1536):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
depths (`List[int]`, *optional*, defaults to [6, 3, 3]):
The number of layers in each encoder block.
num_group_tokens (`List[int]`, *optional*, defaults to [64, 8, 0]):
The number of group tokens for each stage.
num_output_groups (`List[int]`, *optional*, defaults to [64, 8, 8]):
The number of output groups for each stage, 0 means no group.
num_attention_heads (`int`, *optional*, defaults to 6):
Number of attention heads for each attention layer in the Transformer encoder.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` ``"quick_gelu"` are supported.
layer_norm_eps (`float`, *optional*, defaults to 1e-5):
The epsilon used by the layer normalization layers.
dropout (`float`, *optional*, defaults to 0.0):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
initializer_factor (`float`, *optional*, defaults to 1.0):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
Example:
```python
>>> from transformers import GroupViTVisionConfig, GroupViTVisionModel
>>> # Initializing a GroupViTVisionModel with nvidia/groupvit-gcc-yfcc style configuration
>>> configuration = GroupViTVisionConfig()
>>> model = GroupViTVisionModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "groupvit_vision_model"
def __init__(
self,
hidden_size=384,
intermediate_size=1536,
depths=[6, 3, 3],
num_hidden_layers=12,
num_group_tokens=[64, 8, 0],
num_output_groups=[64, 8, 8],
num_attention_heads=6,
image_size=224,
patch_size=16,
num_channels=3,
hidden_act="gelu",
layer_norm_eps=1e-5,
dropout=0.0,
attention_dropout=0.0,
initializer_range=0.02,
initializer_factor=1.0,
assign_eps=1.0,
assign_mlp_ratio=[0.5, 4],
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.depths = depths
if num_hidden_layers != sum(depths):
logger.warning(
f"Manually setting num_hidden_layers to {num_hidden_layers}, but we expect num_hidden_layers ="
f" sum(depth) = {sum(depths)}"
)
self.num_hidden_layers = num_hidden_layers
self.num_group_tokens = num_group_tokens
self.num_output_groups = num_output_groups
self.num_attention_heads = num_attention_heads
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.hidden_act = hidden_act
self.layer_norm_eps = layer_norm_eps
self.dropout = dropout
self.attention_dropout = attention_dropout
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.assign_eps = assign_eps
self.assign_mlp_ratio = assign_mlp_ratio
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
cls._set_token_in_kwargs(kwargs)
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
# get the vision config dict if we are loading from GroupViTConfig
if config_dict.get("model_type") == "groupvit":
config_dict = config_dict["vision_config"]
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
class GroupViTConfig(PretrainedConfig):
r"""
[`GroupViTConfig`] is the configuration class to store the configuration of a [`GroupViTModel`]. It is used to
instantiate a GroupViT model according to the specified arguments, defining the text model and vision model
configs. Instantiating a configuration with the defaults will yield a similar configuration to that of the GroupViT
[nvidia/groupvit-gcc-yfcc](https://huggingface.co/nvidia/groupvit-gcc-yfcc) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
text_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`GroupViTTextConfig`].
vision_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`GroupViTVisionConfig`].
projection_dim (`int`, *optional*, defaults to 256):
Dimentionality of text and vision projection layers.
projection_intermediate_dim (`int`, *optional*, defaults to 4096):
Dimentionality of intermediate layer of text and vision projection layers.
logit_scale_init_value (`float`, *optional*, defaults to 2.6592):
The inital value of the *logit_scale* parameter. Default is used as per the original GroupViT
implementation.
kwargs (*optional*):
Dictionary of keyword arguments.
"""
model_type = "groupvit"
def __init__(
self,
text_config=None,
vision_config=None,
projection_dim=256,
projection_intermediate_dim=4096,
logit_scale_init_value=2.6592,
**kwargs,
):
# If `_config_dict` exist, we use them for the backward compatibility.
# We pop out these 2 attributes before calling `super().__init__` to avoid them being saved (which causes a lot
# of confusion!).
text_config_dict = kwargs.pop("text_config_dict", None)
vision_config_dict = kwargs.pop("vision_config_dict", None)
super().__init__(**kwargs)
# Instead of simply assigning `[text|vision]_config_dict` to `[text|vision]_config`, we use the values in
# `[text|vision]_config_dict` to update the values in `[text|vision]_config`. The values should be same in most
# cases, but we don't want to break anything regarding `_config_dict` that existed before commit `8827e1b2`.
if text_config_dict is not None:
if text_config is None:
text_config = {}
# This is the complete result when using `text_config_dict`.
_text_config_dict = GroupViTTextConfig(**text_config_dict).to_dict()
# Give a warning if the values exist in both `_text_config_dict` and `text_config` but being different.
for key, value in _text_config_dict.items():
if key in text_config and value != text_config[key] and key not in ["transformers_version"]:
# If specified in `text_config_dict`
if key in text_config_dict:
message = (
f"`{key}` is found in both `text_config_dict` and `text_config` but with different values. "
f'The value `text_config_dict["{key}"]` will be used instead.'
)
# If inferred from default argument values (just to be super careful)
else:
message = (
f"`text_config_dict` is provided which will be used to initialize `GroupViTTextConfig`. "
f'The value `text_config["{key}"]` will be overriden.'
)
logger.warning(message)
# Update all values in `text_config` with the ones in `_text_config_dict`.
text_config.update(_text_config_dict)
if vision_config_dict is not None:
if vision_config is None:
vision_config = {}
# This is the complete result when using `vision_config_dict`.
_vision_config_dict = GroupViTVisionConfig(**vision_config_dict).to_dict()
# convert keys to string instead of integer
if "id2label" in _vision_config_dict:
_vision_config_dict["id2label"] = {
str(key): value for key, value in _vision_config_dict["id2label"].items()
}
# Give a warning if the values exist in both `_vision_config_dict` and `vision_config` but being different.
for key, value in _vision_config_dict.items():
if key in vision_config and value != vision_config[key] and key not in ["transformers_version"]:
# If specified in `vision_config_dict`
if key in vision_config_dict:
message = (
f"`{key}` is found in both `vision_config_dict` and `vision_config` but with different "
f'values. The value `vision_config_dict["{key}"]` will be used instead.'
)
# If inferred from default argument values (just to be super careful)
else:
message = (
f"`vision_config_dict` is provided which will be used to initialize `GroupViTVisionConfig`."
f' The value `vision_config["{key}"]` will be overriden.'
)
logger.warning(message)
# Update all values in `vision_config` with the ones in `_vision_config_dict`.
vision_config.update(_vision_config_dict)
if text_config is None:
text_config = {}
logger.info("`text_config` is `None`. Initializing the `GroupViTTextConfig` with default values.")
if vision_config is None:
vision_config = {}
logger.info("`vision_config` is `None`. initializing the `GroupViTVisionConfig` with default values.")
self.text_config = GroupViTTextConfig(**text_config)
self.vision_config = GroupViTVisionConfig(**vision_config)
self.projection_dim = projection_dim
self.projection_intermediate_dim = projection_intermediate_dim
self.logit_scale_init_value = logit_scale_init_value
self.initializer_range = 0.02
self.initializer_factor = 1.0
self.output_segmentation = False
@classmethod
def from_text_vision_configs(cls, text_config: GroupViTTextConfig, vision_config: GroupViTVisionConfig, **kwargs):
r"""
Instantiate a [`GroupViTConfig`] (or a derived class) from groupvit text model configuration and groupvit
vision model configuration.
Returns:
[`GroupViTConfig`]: An instance of a configuration object
"""
return cls(text_config=text_config.to_dict(), vision_config=vision_config.to_dict(), **kwargs)
class GroupViTOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("input_ids", {0: "batch", 1: "sequence"}),
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
("attention_mask", {0: "batch", 1: "sequence"}),
]
)
@property
def outputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("logits_per_image", {0: "batch"}),
("logits_per_text", {0: "batch"}),
("text_embeds", {0: "batch"}),
("image_embeds", {0: "batch"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
def generate_dummy_inputs(
self,
processor: "ProcessorMixin",
batch_size: int = -1,
seq_length: int = -1,
framework: Optional["TensorType"] = None,
) -> Mapping[str, Any]:
text_input_dict = super().generate_dummy_inputs(
processor.tokenizer, batch_size=batch_size, seq_length=seq_length, framework=framework
)
image_input_dict = super().generate_dummy_inputs(
processor.image_processor, batch_size=batch_size, framework=framework
)
return {**text_input_dict, **image_input_dict}
@property
def default_onnx_opset(self) -> int:
return 14
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/groupvit/modeling_groupvit.py | # coding=utf-8
# Copyright 2022 NVIDIA and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch GroupViT model."""
import collections.abc
import math
from dataclasses import dataclass
from typing import Any, Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from ...activations import ACT2FN
from ...modeling_attn_mask_utils import _create_4d_causal_attention_mask, _prepare_4d_attention_mask
from ...modeling_outputs import BaseModelOutput, BaseModelOutputWithPooling
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_groupvit import GroupViTConfig, GroupViTTextConfig, GroupViTVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "nvidia/groupvit-gcc-yfcc"
GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"nvidia/groupvit-gcc-yfcc",
# See all GroupViT models at https://huggingface.co/models?filter=groupvit
]
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/pytorch/pytorch%20lightning/loss%20function/gpu/2021/03/07/CLIP.html
def contrastive_loss(logits: torch.Tensor) -> torch.Tensor:
return nn.functional.cross_entropy(logits, torch.arange(len(logits), device=logits.device))
# Copied from transformers.models.clip.modeling_clip.clip_loss with clip->groupvit
def groupvit_loss(similarity: torch.Tensor) -> torch.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(similarity.t())
return (caption_loss + image_loss) / 2.0
def hard_softmax(logits: torch.Tensor, dim: int):
y_soft = logits.softmax(dim)
# Straight through.
index = y_soft.max(dim, keepdim=True)[1]
y_hard = torch.zeros_like(logits, memory_format=torch.legacy_contiguous_format).scatter_(dim, index, 1.0)
ret = y_hard - y_soft.detach() + y_soft
return ret
def gumbel_softmax(logits: torch.Tensor, tau: float = 1, hard: bool = False, dim: int = -1) -> torch.Tensor:
# more stable https://github.com/pytorch/pytorch/issues/41663
gumbel_dist = torch.distributions.gumbel.Gumbel(
torch.tensor(0.0, device=logits.device, dtype=logits.dtype),
torch.tensor(1.0, device=logits.device, dtype=logits.dtype),
)
gumbels = gumbel_dist.sample(logits.shape)
gumbels = (logits + gumbels) / tau # ~Gumbel(logits,tau)
y_soft = gumbels.softmax(dim)
if hard:
# Straight through.
index = y_soft.max(dim, keepdim=True)[1]
y_hard = torch.zeros_like(logits, memory_format=torch.legacy_contiguous_format).scatter_(dim, index, 1.0)
ret = y_hard - y_soft.detach() + y_soft
else:
# Reparametrization trick.
ret = y_soft
return ret
def resize_attention_map(attentions, height, width, align_corners=False):
"""
Args:
attentions (`torch.Tensor`): attention map of shape [batch_size, groups, feat_height*feat_width]
height (`int`): height of the output attention map
width (`int`): width of the output attention map
align_corners (`bool`, *optional*): the `align_corner` argument for `nn.functional.interpolate`.
Returns:
`torch.Tensor`: resized attention map of shape [batch_size, groups, height, width]
"""
scale = (height * width // attentions.shape[2]) ** 0.5
if height > width:
feat_width = int(np.round(width / scale))
feat_height = attentions.shape[2] // feat_width
else:
feat_height = int(np.round(height / scale))
feat_width = attentions.shape[2] // feat_height
batch_size = attentions.shape[0]
groups = attentions.shape[1] # number of group token
# [batch_size, groups, height*width, groups] -> [batch_size, groups, height, width]
attentions = attentions.reshape(batch_size, groups, feat_height, feat_width)
attentions = nn.functional.interpolate(
attentions, size=(height, width), mode="bilinear", align_corners=align_corners
)
return attentions
def get_grouping_from_attentions(attentions, hw_shape):
"""
Args:
attentions (`tuple(torch.FloatTensor)`: tuple of attention maps returned by `GroupViTVisionTransformer`
hw_shape (`tuple(int)`): height and width of the output attention map
Returns:
`torch.Tensor`: the attention map of shape [batch_size, groups, height, width]
"""
attn_maps = []
with torch.no_grad():
prev_attn_masks = None
for attn_masks in attentions:
# [batch_size, num_groups, height x width] -> [batch_size, height x width, num_groups]
attn_masks = attn_masks.permute(0, 2, 1).contiguous()
if prev_attn_masks is None:
prev_attn_masks = attn_masks
else:
prev_attn_masks = prev_attn_masks @ attn_masks
# [batch_size, heightxwidth, num_groups] -> [batch_size, num_groups, heightxwidth] -> [batch_size, num_groups, height, width]
cur_attn_map = resize_attention_map(prev_attn_masks.permute(0, 2, 1).contiguous(), *hw_shape)
attn_maps.append(cur_attn_map)
# [batch_size, num_groups, height, width]
final_grouping = attn_maps[-1]
return final_grouping
class GroupViTCrossAttentionLayer(nn.Module):
def __init__(self, config: GroupViTVisionConfig):
super().__init__()
self.attn = GroupViTAttention(config)
self.norm2 = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.mlp = GroupViTMLP(config)
self.norm_post = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, query, key):
x = query
x = x + self.attn(query, encoder_hidden_states=key)[0]
x = x + self.mlp(self.norm2(x))
x = self.norm_post(x)
return x
class GroupViTAssignAttention(nn.Module):
def __init__(self, config: GroupViTVisionConfig):
super().__init__()
self.scale = config.hidden_size**-0.5
self.q_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.k_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.v_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.proj = nn.Linear(config.hidden_size, config.hidden_size)
self.assign_eps = config.assign_eps
def get_attn(self, attn, gumbel=True, hard=True):
if gumbel and self.training:
attn = gumbel_softmax(attn, dim=-2, hard=hard)
else:
if hard:
attn = hard_softmax(attn, dim=-2)
else:
attn = nn.functional.softmax(attn, dim=-2)
return attn
def forward(self, query, key):
value = key
# [batch_size, query_length, channels]
query = self.q_proj(query)
# [batch_size, key_length, channels]
key = self.k_proj(key)
# [batch_size, key_length, channels]
value = self.v_proj(value)
# [batch_size, query_length, key_length]
raw_attn = (query @ key.transpose(-2, -1)) * self.scale
attn = self.get_attn(raw_attn)
soft_attn = self.get_attn(raw_attn, gumbel=False, hard=False)
attn = attn / (attn.sum(dim=-1, keepdim=True) + self.assign_eps)
out = attn @ value
out = self.proj(out)
return out, soft_attn
class GroupViTTokenAssign(nn.Module):
def __init__(self, config: GroupViTVisionConfig, num_group_token, num_output_group):
super().__init__()
self.num_output_group = num_output_group
# norm on group_tokens
self.norm_tokens = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
assign_mlp_ratio = (
config.assign_mlp_ratio
if isinstance(config.assign_mlp_ratio, collections.abc.Iterable)
else (config.assign_mlp_ratio, config.assign_mlp_ratio)
)
tokens_dim, channels_dim = [int(x * config.hidden_size) for x in assign_mlp_ratio]
self.mlp_inter = GroupViTMixerMLP(config, num_group_token, tokens_dim, num_output_group)
self.norm_post_tokens = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
# norm on x
self.norm_x = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.pre_assign_attn = GroupViTCrossAttentionLayer(config)
self.assign = GroupViTAssignAttention(config)
self.norm_new_x = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.mlp_channels = GroupViTMLP(config, config.hidden_size, channels_dim, config.hidden_size)
def project_group_token(self, group_tokens):
"""
Args:
group_tokens (torch.Tensor): group tokens, [batch_size, num_group_tokens, channels]
Returns:
projected_group_tokens (torch.Tensor): [batch_size, num_output_groups, channels]
"""
# [B, num_output_groups, C] <- [B, num_group_tokens, C]
projected_group_tokens = self.mlp_inter(group_tokens)
projected_group_tokens = self.norm_post_tokens(projected_group_tokens)
return projected_group_tokens
def forward(self, image_tokens, group_tokens):
"""
Args:
image_tokens (`torch.Tensor`): image tokens, of shape [batch_size, input_length, channels]
group_tokens (`torch.Tensor`): group tokens, [batch_size, num_group_tokens, channels]
"""
group_tokens = self.norm_tokens(group_tokens)
image_tokens = self.norm_x(image_tokens)
# [batch_size, num_output_groups, channels]
projected_group_tokens = self.project_group_token(group_tokens)
projected_group_tokens = self.pre_assign_attn(projected_group_tokens, image_tokens)
new_image_tokens, attention = self.assign(projected_group_tokens, image_tokens)
new_image_tokens += projected_group_tokens
new_image_tokens = new_image_tokens + self.mlp_channels(self.norm_new_x(new_image_tokens))
return new_image_tokens, attention
@dataclass
class GroupViTModelOutput(ModelOutput):
"""
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image (`torch.FloatTensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text (`torch.FloatTensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
segmentation_logits (`torch.FloatTensor` of shape `(batch_size, config.num_labels, logits_height, logits_width)`):
Classification scores for each pixel.
<Tip warning={true}>
The logits returned do not necessarily have the same size as the `pixel_values` passed as inputs. This is
to avoid doing two interpolations and lose some quality when a user needs to resize the logits to the
original image size as post-processing. You should always check your logits shape and resize as needed.
</Tip>
text_embeds (`torch.FloatTensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of
[`GroupViTTextModel`].
image_embeds (`torch.FloatTensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`GroupViTVisionModel`].
text_model_output (`BaseModelOutputWithPooling`):
The output of the [`GroupViTTextModel`].
vision_model_output (`BaseModelOutputWithPooling`):
The output of the [`GroupViTVisionModel`].
"""
loss: Optional[torch.FloatTensor] = None
logits_per_image: torch.FloatTensor = None
logits_per_text: torch.FloatTensor = None
segmentation_logits: torch.FloatTensor = None
text_embeds: torch.FloatTensor = None
image_embeds: torch.FloatTensor = None
text_model_output: BaseModelOutputWithPooling = None
vision_model_output: BaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
class GroupViTPatchEmbeddings(nn.Module):
"""
Image to Patch Embedding.
"""
def __init__(
self,
image_size: int = 224,
patch_size: Union[int, Tuple[int, int]] = 16,
num_channels: int = 3,
embed_dim: int = 768,
):
super().__init__()
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_patches = num_patches
self.projection = nn.Conv2d(num_channels, embed_dim, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values: torch.Tensor, interpolate_pos_encoding: bool = False) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if not interpolate_pos_encoding:
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model"
f" ({self.image_size[0]}*{self.image_size[1]})."
)
x = self.projection(pixel_values).flatten(2).transpose(1, 2)
return x
class GroupViTVisionEmbeddings(nn.Module):
def __init__(self, config: GroupViTVisionConfig):
super().__init__()
self.patch_embeddings = GroupViTPatchEmbeddings(
image_size=config.image_size,
patch_size=config.patch_size,
num_channels=config.num_channels,
embed_dim=config.hidden_size,
)
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches, config.hidden_size))
self.dropout = nn.Dropout(config.dropout)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.config = config
def interpolate_pos_encoding(self, embeddings: torch.Tensor, height: int, width: int) -> torch.Tensor:
"""
This method allows to interpolate the pre-trained position encodings, to be able to use the model on higher
resolution images.
Source:
https://github.com/facebookresearch/dino/blob/de9ee3df6cf39fac952ab558447af1fa1365362a/vision_transformer.py#L174
"""
npatch = embeddings.shape[1]
if npatch == self.position_embeddings.shape[1] and height == width:
return self.position_embeddings
patch_pos_embed = self.position_embeddings
num_original_pos_embed = patch_pos_embed.shape[1]
dim = embeddings.shape[-1]
feat_height = height // self.config.patch_size
feat_width = width // self.config.patch_size
# we add a small number to avoid floating point error in the interpolation
# see discussion at https://github.com/facebookresearch/dino/issues/8
feat_height, feat_width = feat_height + 0.1, feat_width + 0.1
original_height = original_width = math.sqrt(num_original_pos_embed)
reshaped_patch_pos_embed = patch_pos_embed.reshape(1, int(original_height), int(original_width), dim).permute(
0, 3, 1, 2
)
scale_factor = (feat_height / original_height, feat_width / original_width)
patch_pos_embed = nn.functional.interpolate(
reshaped_patch_pos_embed,
scale_factor=scale_factor,
mode="bicubic",
align_corners=False,
)
patch_pos_embed = patch_pos_embed.permute(0, 2, 3, 1).view(1, -1, dim)
return patch_pos_embed
def forward(self, pixel_values: torch.Tensor, interpolate_pos_encoding: bool = False) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
embeddings = self.patch_embeddings(pixel_values, interpolate_pos_encoding=interpolate_pos_encoding)
embeddings = self.layernorm(embeddings)
batch_size, seq_len, _ = embeddings.size()
# add positional encoding to each token
if interpolate_pos_encoding:
embeddings = embeddings + self.interpolate_pos_encoding(embeddings, height, width)
else:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
# Copied from transformers.models.clip.modeling_clip.CLIPTextEmbeddings with CLIP->GroupViT
class GroupViTTextEmbeddings(nn.Module):
def __init__(self, config: GroupViTTextConfig):
super().__init__()
embed_dim = config.hidden_size
self.token_embedding = nn.Embedding(config.vocab_size, embed_dim)
self.position_embedding = nn.Embedding(config.max_position_embeddings, embed_dim)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
) -> torch.Tensor:
seq_length = input_ids.shape[-1] if input_ids is not None else inputs_embeds.shape[-2]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
if inputs_embeds is None:
inputs_embeds = self.token_embedding(input_ids)
position_embeddings = self.position_embedding(position_ids)
embeddings = inputs_embeds + position_embeddings
return embeddings
class GroupViTStage(nn.Module):
"""This corresponds to the `GroupingLayer` class in the GroupViT implementation."""
def __init__(
self,
config: GroupViTVisionConfig,
depth: int,
num_prev_group_token: int,
num_group_token: int,
num_output_group: int,
):
super().__init__()
self.depth = depth
self.num_group_token = num_group_token
if num_group_token > 0:
self.group_token = nn.Parameter(torch.zeros(1, num_group_token, config.hidden_size))
else:
self.group_token = None
self.layers = nn.ModuleList([GroupViTEncoderLayer(config) for _ in range(depth)])
if num_group_token > 0:
self.downsample = GroupViTTokenAssign(
config=config,
num_group_token=num_group_token,
num_output_group=num_output_group,
)
else:
self.downsample = None
if num_prev_group_token > 0 and num_group_token > 0:
self.group_projector = nn.Sequential(
nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps),
GroupViTMixerMLP(config, num_prev_group_token, config.hidden_size // 2, num_group_token),
)
else:
self.group_projector = None
@property
def with_group_token(self):
return self.group_token is not None
def split_x(self, x):
if self.with_group_token:
return x[:, : -self.num_group_token], x[:, -self.num_group_token :]
else:
return x, None
def concat_x(self, x: torch.Tensor, group_token: Optional[torch.Tensor] = None) -> torch.Tensor:
if group_token is None:
return x
return torch.cat([x, group_token], dim=1)
def forward(
self,
hidden_states: torch.Tensor,
prev_group_token: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the grouping tensors of Grouping block.
"""
if self.with_group_token:
group_token = self.group_token.expand(hidden_states.size(0), -1, -1)
if self.group_projector is not None:
group_token = group_token + self.group_projector(prev_group_token)
else:
group_token = None
x = hidden_states
cat_x = self.concat_x(x, group_token)
for layer in self.layers:
layer_out = layer(cat_x, attention_mask=None, causal_attention_mask=None)
cat_x = layer_out[0]
x, group_token = self.split_x(cat_x)
attention = None
if self.downsample is not None:
x, attention = self.downsample(x, group_token)
outputs = (x, group_token)
if output_attentions:
outputs = outputs + (attention,)
return outputs
class GroupViTMLP(nn.Module):
def __init__(
self,
config: GroupViTVisionConfig,
hidden_size: Optional[int] = None,
intermediate_size: Optional[int] = None,
output_size: Optional[int] = None,
):
super().__init__()
self.config = config
self.activation_fn = ACT2FN[config.hidden_act]
hidden_size = hidden_size if hidden_size is not None else config.hidden_size
intermediate_size = intermediate_size if intermediate_size is not None else config.intermediate_size
output_size = output_size if output_size is not None else hidden_size
self.fc1 = nn.Linear(hidden_size, intermediate_size)
self.fc2 = nn.Linear(intermediate_size, output_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
class GroupViTMixerMLP(GroupViTMLP):
def forward(self, x):
x = super().forward(x.transpose(1, 2))
return x.transpose(1, 2)
class GroupViTAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.num_heads = config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = config.attention_dropout
self.k_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.v_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.q_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.out_proj = nn.Linear(self.embed_dim, self.embed_dim)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
bsz, tgt_len, embed_dim = hidden_states.size()
is_cross_attention = encoder_hidden_states is not None
# get query proj
query_states = self.q_proj(hidden_states) * self.scale
if is_cross_attention:
key_states = self._shape(self.k_proj(encoder_hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(encoder_hidden_states), -1, bsz)
else:
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
if causal_attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {causal_attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + causal_attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit akward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(bsz, tgt_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
# Copied from transformers.models.clip.modeling_clip.CLIPEncoderLayer with CLIP->GroupViT
class GroupViTEncoderLayer(nn.Module):
def __init__(self, config: GroupViTConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = GroupViTAttention(config)
self.layer_norm1 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
self.mlp = GroupViTMLP(config)
self.layer_norm2 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
causal_attention_mask: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
class GroupViTPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = GroupViTConfig
base_model_prefix = "groupvit"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
init_range = self.config.initializer_range
if isinstance(module, (nn.Linear, nn.Conv2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=init_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
factor = self.config.initializer_factor
if isinstance(module, GroupViTTextEmbeddings):
module.token_embedding.weight.data.normal_(mean=0.0, std=factor * 0.02)
module.position_embedding.weight.data.normal_(mean=0.0, std=factor * 0.02)
elif isinstance(module, GroupViTAttention):
factor = self.config.initializer_factor
in_proj_std = (module.embed_dim**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (module.embed_dim**-0.5) * factor
nn.init.normal_(module.q_proj.weight, std=in_proj_std)
nn.init.normal_(module.k_proj.weight, std=in_proj_std)
nn.init.normal_(module.v_proj.weight, std=in_proj_std)
nn.init.normal_(module.out_proj.weight, std=out_proj_std)
elif isinstance(module, GroupViTMLP):
factor = self.config.initializer_factor
in_proj_std = (module.config.hidden_size**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
fc_std = (2 * module.config.hidden_size) ** -0.5 * factor
nn.init.normal_(module.fc1.weight, std=fc_std)
nn.init.normal_(module.fc2.weight, std=in_proj_std)
GROUPVIT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`GroupViTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
GROUPVIT_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`CLIPTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
GROUPVIT_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
GROUPVIT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`CLIPTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`CLIPImageProcessor.__call__`] for details.
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class GroupViTVisionEncoder(nn.Module):
def __init__(self, config: GroupViTVisionConfig) -> None:
super().__init__()
self.config = config
self.stages = nn.ModuleList(
[
GroupViTStage(
config=config,
depth=config.depths[i],
num_group_token=config.num_group_tokens[i],
num_output_group=config.num_output_groups[i],
num_prev_group_token=config.num_output_groups[i - 1] if i > 0 else 0,
)
for i in range(len(config.depths))
]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, BaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
all_hidden_states = () if output_hidden_states else None
all_groupings = () if output_attentions else None
group_tokens = None
for i, stage in enumerate(self.stages):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = stage(hidden_states, group_tokens, output_attentions)
hidden_states = layer_outputs[0]
group_tokens = layer_outputs[1]
if output_attentions and layer_outputs[2] is not None:
all_groupings = all_groupings + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_groupings] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_groupings
)
class GroupViTTextEncoder(nn.Module):
"""
Transformer encoder consisting of `config.num_hidden_layers` self-attention layers. Each layer is a
[`GroupViTEncoderLayer`].
Args:
config: GroupViTTextConfig
"""
def __init__(self, config: GroupViTTextConfig):
super().__init__()
self.config = config
self.layers = nn.ModuleList([GroupViTEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
causal_attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Causal mask for the text model. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
hidden_states = inputs_embeds
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
encoder_layer.__call__,
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
# Copied from transformers.models.clip.modeling_clip.CLIPTextTransformer with CLIPText->GroupViTText, CLIPEncoder->GroupViTTextEncoder, CLIP_TEXT->GROUPVIT_TEXT
class GroupViTTextTransformer(nn.Module):
def __init__(self, config: GroupViTTextConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = GroupViTTextEmbeddings(config)
self.encoder = GroupViTTextEncoder(config)
self.final_layer_norm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
# For `pooled_output` computation
self.eos_token_id = config.eos_token_id
@add_start_docstrings_to_model_forward(GROUPVIT_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=GroupViTTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None:
raise ValueError("You have to specify input_ids")
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
hidden_states = self.embeddings(input_ids=input_ids, position_ids=position_ids)
# CLIP's text model uses causal mask, prepare it here.
# https://github.com/openai/CLIP/blob/cfcffb90e69f37bf2ff1e988237a0fbe41f33c04/clip/model.py#L324
causal_attention_mask = _create_4d_causal_attention_mask(
input_shape, hidden_states.dtype, device=hidden_states.device
)
# expand attention_mask
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _prepare_4d_attention_mask(attention_mask, hidden_states.dtype)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
last_hidden_state = self.final_layer_norm(last_hidden_state)
if self.eos_token_id == 2:
# The `eos_token_id` was incorrect before PR #24773: Let's keep what have been done here.
# A CLIP model with such `eos_token_id` in the config can't work correctly with extra new tokens added
# ------------------------------------------------------------
# text_embeds.shape = [batch_size, sequence_length, transformer.width]
# take features from the eot embedding (eot_token is the highest number in each sequence)
# casting to torch.int for onnx compatibility: argmax doesn't support int64 inputs with opset 14
pooled_output = last_hidden_state[
torch.arange(last_hidden_state.shape[0], device=last_hidden_state.device),
input_ids.to(dtype=torch.int, device=last_hidden_state.device).argmax(dim=-1),
]
else:
# The config gets updated `eos_token_id` from PR #24773 (so the use of exta new tokens is possible)
pooled_output = last_hidden_state[
torch.arange(last_hidden_state.shape[0], device=last_hidden_state.device),
# We need to get the first position of `eos_token_id` value (`pad_token_ids` might equal to `eos_token_id`)
(input_ids.to(dtype=torch.int, device=last_hidden_state.device) == self.eos_token_id)
.int()
.argmax(dim=-1),
]
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class GroupViTTextModel(GroupViTPreTrainedModel):
config_class = GroupViTTextConfig
def __init__(self, config: GroupViTTextConfig):
super().__init__(config)
self.text_model = GroupViTTextTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.text_model.embeddings.token_embedding
def set_input_embeddings(self, value):
self.text_model.embeddings.token_embedding = value
@add_start_docstrings_to_model_forward(GROUPVIT_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=GroupViTTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from transformers import CLIPTokenizer, GroupViTTextModel
>>> tokenizer = CLIPTokenizer.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> model = GroupViTTextModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled (EOS token) states
```"""
return self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class GroupViTVisionTransformer(nn.Module):
def __init__(self, config: GroupViTVisionConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = GroupViTVisionEmbeddings(config)
self.encoder = GroupViTVisionEncoder(config)
self.layernorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
@add_start_docstrings_to_model_forward(GROUPVIT_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=GroupViTVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.embeddings(pixel_values)
encoder_outputs = self.encoder(
hidden_states=hidden_states,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
# normalize the last hidden state
last_hidden_state = self.layernorm(last_hidden_state)
pooled_output = last_hidden_state.mean(dim=1)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class GroupViTVisionModel(GroupViTPreTrainedModel):
config_class = GroupViTVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: GroupViTVisionConfig):
super().__init__(config)
self.vision_model = GroupViTVisionTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> GroupViTPatchEmbeddings:
return self.vision_model.embeddings.patch_embeddings
@add_start_docstrings_to_model_forward(GROUPVIT_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=GroupViTVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, GroupViTVisionModel
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> model = GroupViTVisionModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
@add_start_docstrings(GROUPVIT_START_DOCSTRING)
class GroupViTModel(GroupViTPreTrainedModel):
config_class = GroupViTConfig
def __init__(self, config: GroupViTConfig):
super().__init__(config)
if not isinstance(config.text_config, GroupViTTextConfig):
raise ValueError(
"config.text_config is expected to be of type GroupViTTextConfig but is of type"
f" {type(config.text_config)}."
)
if not isinstance(config.vision_config, GroupViTVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type GroupViTVisionConfig but is of type"
f" {type(config.vision_config)}."
)
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.projection_intermediate_dim = config.projection_intermediate_dim
self.text_embed_dim = text_config.hidden_size
self.vision_embed_dim = vision_config.hidden_size
self.text_model = GroupViTTextTransformer(text_config)
self.vision_model = GroupViTVisionTransformer(vision_config)
self.visual_projection = nn.Sequential(
nn.Linear(self.vision_embed_dim, self.projection_intermediate_dim, bias=True),
nn.BatchNorm1d(self.projection_intermediate_dim),
nn.ReLU(inplace=True),
nn.Linear(self.projection_intermediate_dim, self.projection_dim, bias=True),
)
self.text_projection = nn.Sequential(
nn.Linear(self.text_embed_dim, self.projection_intermediate_dim, bias=True),
nn.BatchNorm1d(self.projection_intermediate_dim),
nn.ReLU(inplace=True),
nn.Linear(self.projection_intermediate_dim, self.projection_dim, bias=True),
)
self.logit_scale = nn.Parameter(torch.tensor(self.config.logit_scale_init_value))
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(GROUPVIT_TEXT_INPUTS_DOCSTRING)
def get_text_features(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
text_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The text embeddings obtained by
applying the projection layer to the pooled output of [`GroupViTTextModel`].
Examples:
```python
>>> from transformers import CLIPTokenizer, GroupViTModel
>>> model = GroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> tokenizer = CLIPTokenizer.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> text_features = model.get_text_features(**inputs)
```"""
# Use GROUPVIT model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_features = self.text_projection(pooled_output)
return text_features
@add_start_docstrings_to_model_forward(GROUPVIT_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
image_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The image embeddings obtained by
applying the projection layer to the pooled output of [`GroupViTVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, GroupViTModel
>>> model = GroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> image_features = model.get_image_features(**inputs)
```"""
# Use GROUPVIT model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = vision_outputs[1] # pooled_output
image_features = self.visual_projection(pooled_output)
return image_features
@add_start_docstrings_to_model_forward(GROUPVIT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=GroupViTModelOutput, config_class=GroupViTConfig)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
pixel_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
output_segmentation: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, GroupViTModelOutput]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, GroupViTModel
>>> model = GroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="pt", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = logits_per_image.softmax(dim=1) # we can take the softmax to get the label probabilities
```"""
# Use GROUPVIT model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_segmentation = (
output_segmentation if output_segmentation is not None else self.config.output_segmentation
)
if output_segmentation:
output_attentions = True
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(text_embeds)
# normalized features
image_embeds = image_embeds / image_embeds.norm(dim=-1, keepdim=True)
text_embeds = text_embeds / text_embeds.norm(dim=-1, keepdim=True)
# cosine similarity as logits
logit_scale = self.logit_scale.exp()
logits_per_text = torch.matmul(text_embeds, image_embeds.t()) * logit_scale
logits_per_image = logits_per_text.t()
seg_logits = None
if output_segmentation:
# grouped features
# [batch_size_image, num_group, hidden_size]
image_group_embeds = vision_outputs[0]
# [batch_size_image*num_group, hidden_size]
image_group_embeds = self.visual_projection(image_group_embeds.reshape(-1, image_group_embeds.shape[-1]))
if output_hidden_states:
attentions = vision_outputs[3]
else:
attentions = vision_outputs[2]
# [batch_size_image, num_group, height, width]
grouping = get_grouping_from_attentions(attentions, pixel_values.shape[2:])
# normalized features
image_group_embeds = image_group_embeds / image_group_embeds.norm(dim=-1, keepdim=True)
# [batch_size_image x num_group, batch_size_text]
logits_per_image_group = torch.matmul(image_group_embeds, text_embeds.t()) * logit_scale
# [batch_size_image, batch_size_text, num_group]
logits_per_image_group = logits_per_image_group.reshape(
image_embeds.shape[0], -1, text_embeds.shape[0]
).permute(0, 2, 1)
# [batch_size_image, batch_size_text, height x width]
flatten_grouping = grouping.reshape(grouping.shape[0], grouping.shape[1], -1)
# [batch_size_image, batch_size_text, height, width]
seg_logits = torch.matmul(logits_per_image_group, flatten_grouping) * logit_scale
seg_logits = seg_logits.reshape(
seg_logits.shape[0], seg_logits.shape[1], grouping.shape[2], grouping.shape[3]
)
loss = None
if return_loss:
loss = groupvit_loss(logits_per_text)
if not return_dict:
if seg_logits is not None:
output = (
logits_per_image,
logits_per_text,
seg_logits,
text_embeds,
image_embeds,
text_outputs,
vision_outputs,
)
else:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return ((loss,) + output) if loss is not None else output
return GroupViTModelOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
segmentation_logits=seg_logits,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/groupvit/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_groupvit": [
"GROUPVIT_PRETRAINED_CONFIG_ARCHIVE_MAP",
"GroupViTConfig",
"GroupViTOnnxConfig",
"GroupViTTextConfig",
"GroupViTVisionConfig",
],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_groupvit"] = [
"GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST",
"GroupViTModel",
"GroupViTPreTrainedModel",
"GroupViTTextModel",
"GroupViTVisionModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_groupvit"] = [
"TF_GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFGroupViTModel",
"TFGroupViTPreTrainedModel",
"TFGroupViTTextModel",
"TFGroupViTVisionModel",
]
if TYPE_CHECKING:
from .configuration_groupvit import (
GROUPVIT_PRETRAINED_CONFIG_ARCHIVE_MAP,
GroupViTConfig,
GroupViTOnnxConfig,
GroupViTTextConfig,
GroupViTVisionConfig,
)
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_groupvit import (
GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST,
GroupViTModel,
GroupViTPreTrainedModel,
GroupViTTextModel,
GroupViTVisionModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_groupvit import (
TF_GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFGroupViTModel,
TFGroupViTPreTrainedModel,
TFGroupViTTextModel,
TFGroupViTVisionModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/groupvit/modeling_tf_groupvit.py | # coding=utf-8
# Copyright 2022 NVIDIA and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 GroupViT model."""
from __future__ import annotations
import collections.abc
import math
from dataclasses import dataclass
from typing import Any, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import TFBaseModelOutput, TFBaseModelOutputWithPooling
from ...modeling_tf_utils import (
TFModelInputType,
TFPreTrainedModel,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import check_embeddings_within_bounds, shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_tensorflow_probability_available,
logging,
replace_return_docstrings,
)
from .configuration_groupvit import GroupViTConfig, GroupViTTextConfig, GroupViTVisionConfig
logger = logging.get_logger(__name__)
# soft dependency
if is_tensorflow_probability_available():
try:
import tensorflow_probability as tfp
# On the first call, check whether a compatible version of TensorFlow is installed
# TensorFlow Probability depends on a recent stable release of TensorFlow
_ = tfp.distributions.Normal(loc=0.0, scale=1.0)
except ImportError:
logger.error(
"GroupViT models are not usable since `tensorflow_probability` can't be loaded. "
"It seems you have `tensorflow_probability` installed with the wrong tensorflow version."
"Please try to reinstall it following the instructions here: https://github.com/tensorflow/probability."
)
_CHECKPOINT_FOR_DOC = "nvidia/groupvit-gcc-yfcc"
TF_GROUPVIT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"nvidia/groupvit-gcc-yfcc",
# See all GroupViT models at https://huggingface.co/models?filter=groupvit
]
LARGE_NEGATIVE = -1e8
# Copied from transformers.models.bart.modeling_tf_bart._expand_mask
def _expand_mask(mask: tf.Tensor, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
src_len = shape_list(mask)[1]
tgt_len = tgt_len if tgt_len is not None else src_len
one_cst = tf.constant(1.0)
mask = tf.cast(mask, dtype=one_cst.dtype)
expanded_mask = tf.tile(mask[:, None, None, :], (1, 1, tgt_len, 1))
return (one_cst - expanded_mask) * LARGE_NEGATIVE
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/pytorch/pytorch%20lightning/loss%20function/gpu/2021/03/07/CLIP.html
def contrastive_loss(logits: tf.Tensor) -> tf.Tensor:
return tf.math.reduce_mean(
tf.keras.metrics.sparse_categorical_crossentropy(
y_true=tf.range(shape_list(logits)[0]), y_pred=logits, from_logits=True
)
)
# Copied from transformers.models.clip.modeling_tf_clip.clip_loss with clip->groupvit
def groupvit_loss(similarity: tf.Tensor) -> tf.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(tf.transpose(similarity))
return (caption_loss + image_loss) / 2.0
def hard_softmax(logits: tf.Tensor, dim: int) -> tf.Tensor:
y_soft = stable_softmax(logits, dim)
# Straight through.
index = tf.argmax(y_soft, dim)
y_hard = tf.one_hot(
index,
depth=shape_list(logits)[dim],
# TensorFlow expects axis to be -1 or between [0, 3). But received: -2
# This is why the following code snippet is used.
axis=range(len(shape_list(logits)))[dim],
dtype=y_soft.dtype,
)
ret = y_hard - tf.stop_gradient(y_soft) + y_soft
return ret
def gumbel_softmax(logits: tf.Tensor, tau: float = 1, hard: bool = False, dim: int = -1) -> tf.Tensor:
gumbel_dist = tfp.distributions.Gumbel(0.0, 1.0)
gumbels = gumbel_dist.sample(tf.shape(logits), dtype=logits.dtype)
gumbels = (logits + gumbels) / tau # ~Gumbel(logits,tau)
y_soft = stable_softmax(gumbels, dim)
if hard:
# Straight through.
index = tf.argmax(y_soft, dim)
y_hard = tf.one_hot(
index,
depth=shape_list(logits)[dim],
# TensorFlow expects axis to be -1 or between [0, 3). But received: -2
# This is why the following code snippet is used.
axis=range(len(shape_list(logits)))[dim],
dtype=y_soft.dtype,
)
ret = y_hard - tf.stop_gradient(y_soft) + y_soft
else:
# Reparametrization trick.
ret = y_soft
return ret
def resize_attention_map(attentions: tf.Tensor, height: int, width: int, align_corners: bool = False) -> tf.Tensor:
"""
Args:
attentions (`tf.Tensor`): attention map of shape [batch_size, groups, feat_height*feat_width]
height (`int`): height of the output attention map
width (`int`): width of the output attention map
align_corners (`bool`, *optional*): the `align_corner` argument for `nn.functional.interpolate`.
Returns:
`tf.Tensor`: resized attention map of shape [batch_size, groups, height, width]
"""
scale = (height * width // attentions.shape[2]) ** 0.5
if height > width:
feat_width = int(np.round(width / scale))
feat_height = shape_list(attentions)[2] // feat_width
else:
feat_height = int(np.round(height / scale))
feat_width = shape_list(attentions)[2] // feat_height
batch_size = shape_list(attentions)[0]
groups = shape_list(attentions)[1] # number of group token
# [batch_size, groups, height x width, groups] -> [batch_size, groups, height, width]
attentions = tf.reshape(attentions, (batch_size, groups, feat_height, feat_width))
attentions = tf.transpose(attentions, perm=(0, 2, 3, 1))
if align_corners:
attentions = tf.compat.v1.image.resize(
attentions,
size=(height, width),
method="bilinear",
align_corners=align_corners,
)
else:
attentions = tf.image.resize(attentions, size=(height, width), method="bilinear")
attentions = tf.transpose(attentions, perm=(0, 3, 1, 2))
return attentions
def get_grouping_from_attentions(attentions: Tuple[tf.Tensor], hw_shape: Tuple[int]) -> tf.Tensor:
"""
Args:
attentions (`tuple(tf.Tensor)`: tuple of attention maps returned by `TFGroupViTVisionTransformer`
hw_shape (`tuple(int)`): height and width of the output attention map
Returns:
`tf.Tensor`: the attention map of shape [batch_size, groups, height, width]
"""
attn_maps = []
prev_attn_masks = None
for attn_masks in attentions:
# [batch_size, num_groups, height x width] -> [batch_size, height x width, num_groups]
attn_masks = tf.transpose(attn_masks, perm=(0, 2, 1))
if prev_attn_masks is None:
prev_attn_masks = attn_masks
else:
prev_attn_masks = tf.matmul(prev_attn_masks, attn_masks)
# [batch_size, height x width, num_groups] -> [batch_size, num_groups, height x width] -> [batch_size, num_groups, height, width]
cur_attn_map = resize_attention_map(tf.transpose(prev_attn_masks, perm=(0, 2, 1)), *hw_shape)
attn_maps.append(cur_attn_map)
# [batch_size, num_groups, height, width]
final_grouping = attn_maps[-1]
return tf.stop_gradient(final_grouping)
@dataclass
class TFGroupViTModelOutput(ModelOutput):
"""
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image (`tf.Tensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text (`tf.Tensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
segmentation_logits (`tf.Tensor` of shape `(batch_size, config.num_labels, logits_height, logits_width)`):
Classification scores for each pixel.
<Tip warning={true}>
The logits returned do not necessarily have the same size as the `pixel_values` passed as inputs. This is
to avoid doing two interpolations and lose some quality when a user needs to resize the logits to the
original image size as post-processing. You should always check your logits shape and resize as needed.
</Tip>
text_embeds (`tf.Tensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of
[`TFGroupViTTextModel`].
image_embeds (`tf.Tensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`TFGroupViTVisionModel`].
text_model_output (`TFBaseModelOutputWithPooling`):
The output of the [`TFGroupViTTextModel`].
vision_model_output (`TFBaseModelOutputWithPooling`):
The output of the [`TFGroupViTVisionModel`].
"""
loss: tf.Tensor | None = None
logits_per_image: tf.Tensor = None
logits_per_text: tf.Tensor = None
segmentation_logits: tf.Tensor = None
text_embeds: tf.Tensor = None
image_embeds: tf.Tensor = None
text_model_output: TFBaseModelOutputWithPooling = None
vision_model_output: TFBaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
class TFGroupViTCrossAttentionLayer(tf.keras.layers.Layer):
def __init__(self, config: GroupViTVisionConfig, **kwargs):
super().__init__(**kwargs)
self.attn = TFGroupViTAttention(config, name="attn")
self.norm2 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="norm2")
self.mlp = TFGroupViTMLP(config, name="mlp")
self.norm_post = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="norm_post")
def call(self, query: tf.Tensor, key: tf.Tensor, training: bool = False) -> tf.Tensor:
x = query
x = x + self.attn(query, encoder_hidden_states=key)[0]
x = x + self.mlp(self.norm2(x))
x = self.norm_post(x)
return x
class TFGroupViTAssignAttention(tf.keras.layers.Layer):
def __init__(self, config: GroupViTVisionConfig, **kwargs):
super().__init__(**kwargs)
self.scale = config.hidden_size**-0.5
self.q_proj = tf.keras.layers.Dense(config.hidden_size, name="q_proj")
self.k_proj = tf.keras.layers.Dense(config.hidden_size, name="k_proj")
self.v_proj = tf.keras.layers.Dense(config.hidden_size, name="v_proj")
self.proj = tf.keras.layers.Dense(config.hidden_size, name="proj")
self.assign_eps = config.assign_eps
def get_attn(self, attn: tf.Tensor, gumbel: bool = True, hard: bool = True, training: bool = False) -> tf.Tensor:
if gumbel and training:
attn = gumbel_softmax(attn, dim=-2, hard=hard)
else:
if hard:
attn = hard_softmax(attn, dim=-2)
else:
attn = stable_softmax(attn, axis=-2)
return attn
def call(self, query: tf.Tensor, key: tf.Tensor, training: bool = False):
value = key
# [batch_size, query_length, channels]
query = self.q_proj(query)
# [batch_size, key_length, channels]
key = self.k_proj(key)
# [batch_size, key_length, channels]
value = self.v_proj(value)
# [batch_size, query_length, key_length]
raw_attn = tf.matmul(query, key, transpose_b=True) * self.scale
attn = self.get_attn(raw_attn, training=training)
soft_attn = self.get_attn(raw_attn, training=training, gumbel=False, hard=False)
attn = attn / (tf.math.reduce_sum(attn, axis=-1, keepdims=True) + self.assign_eps)
out = tf.matmul(attn, value)
out = self.proj(out)
return out, soft_attn
class TFGroupViTTokenAssign(tf.keras.layers.Layer):
def __init__(self, config: GroupViTVisionConfig, num_group_token: int, num_output_group: int, **kwargs):
super().__init__(**kwargs)
self.num_output_group = num_output_group
# norm on group_tokens
self.norm_tokens = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="norm_tokens")
assign_mlp_ratio = (
config.assign_mlp_ratio
if isinstance(config.assign_mlp_ratio, collections.abc.Iterable)
else (config.assign_mlp_ratio, config.assign_mlp_ratio)
)
tokens_dim, channels_dim = [int(x * config.hidden_size) for x in assign_mlp_ratio]
self.mlp_inter = TFGroupViTMixerMLP(config, num_group_token, tokens_dim, num_output_group, name="mlp_inter")
self.norm_post_tokens = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="norm_post_tokens"
)
# norm on x
self.norm_x = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="norm_x")
self.pre_assign_attn = TFGroupViTCrossAttentionLayer(config, name="pre_assign_attn")
self.assign = TFGroupViTAssignAttention(config, name="assign")
self.norm_new_x = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="norm_new_x")
self.mlp_channels = TFGroupViTMLP(
config, config.hidden_size, channels_dim, config.hidden_size, name="mlp_channels"
)
def project_group_token(self, group_tokens: tf.Tensor) -> tf.Tensor:
"""
Args:
group_tokens (tf.Tensor): group tokens, [batch_size, num_group_tokens, channels]
Returns:
projected_group_tokens (tf.Tensor): [batch_size, num_output_groups, channels]
"""
# [B, num_output_groups, C] <- [B, num_group_tokens, C]
projected_group_tokens = self.mlp_inter(group_tokens)
projected_group_tokens = self.norm_post_tokens(projected_group_tokens)
return projected_group_tokens
def call(self, image_tokens: tf.Tensor, group_tokens: tf.Tensor, training: bool = False):
"""
Args:
image_tokens (`tf.Tensor`): image tokens, of shape [batch_size, input_length, channels]
group_tokens (`tf.Tensor`): group tokens, [batch_size, num_group_tokens, channels]
"""
group_tokens = self.norm_tokens(group_tokens)
image_tokens = self.norm_x(image_tokens)
# [batch_size, num_output_groups, channels]
projected_group_tokens = self.project_group_token(group_tokens)
projected_group_tokens = self.pre_assign_attn(projected_group_tokens, image_tokens)
new_image_tokens, attention = self.assign(projected_group_tokens, image_tokens)
new_image_tokens += projected_group_tokens
new_image_tokens = new_image_tokens + self.mlp_channels(self.norm_new_x(new_image_tokens))
return new_image_tokens, attention
# Adapted from transformers.models.vit.modeling_tf_vit.TFViTPatchEmbeddings with ViT->GroupViT
class TFGroupViTPatchEmbeddings(tf.keras.layers.Layer):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config: GroupViTConfig, **kwargs):
super().__init__(**kwargs)
image_size, patch_size = config.image_size, config.patch_size
num_channels = config.num_channels
# hidden_size is a member as it will be required in the call method
self.hidden_size = config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_patches = num_patches
self.num_channels = num_channels
self.config = config
self.projection = tf.keras.layers.Conv2D(
filters=self.hidden_size,
kernel_size=patch_size,
strides=patch_size,
padding="valid",
data_format="channels_last",
use_bias=True,
kernel_initializer=get_initializer(self.config.initializer_range),
bias_initializer="zeros",
name="projection",
)
def call(
self, pixel_values: tf.Tensor, interpolate_pos_encoding: bool = False, training: bool = False
) -> tf.Tensor:
batch_size, num_channels, height, width = shape_list(pixel_values)
if tf.executing_eagerly() and num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if (
not interpolate_pos_encoding
and tf.executing_eagerly()
and (height != self.image_size[0] or width != self.image_size[1])
):
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model ({self.image_size[0]}*{self.image_size[1]})."
)
# When running on CPU, `tf.keras.layers.Conv2D` doesn't support `NCHW` format.
# So change the input format from `NCHW` to `NHWC`.
# shape = (batch_size, in_height, in_width, in_channels=num_channels)
pixel_values = tf.transpose(pixel_values, perm=(0, 2, 3, 1))
projection = self.projection(pixel_values)
# Change the 2D spatial dimensions to a single temporal dimension.
# shape = (batch_size, num_patches, out_channels=embed_dim)
num_patches = (width // self.patch_size[1]) * (height // self.patch_size[0])
# In the TFGroupViTVisionEmbeddings the embeddings from this layer will be layer normalized
# LayerNormalization layer needs to have static last dimension (otherwise the test_keras_save_load fails with symbolic tensors)
# This is why we have used the hidden_size in the reshape method
embeddings = tf.reshape(tensor=projection, shape=(batch_size, num_patches, self.hidden_size))
return embeddings
# Adapted from transformers.vit.modeling_tf_vit.TFViTEmbeddings
class TFGroupViTVisionEmbeddings(tf.keras.layers.Layer):
"""
Construct the position and patch embeddings.
"""
def __init__(self, config: GroupViTVisionConfig, **kwargs):
super().__init__(**kwargs)
self.patch_embeddings = TFGroupViTPatchEmbeddings(config, name="patch_embeddings")
self.dropout = tf.keras.layers.Dropout(rate=config.dropout, name="dropout")
self.layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm")
self.config = config
def build(self, input_shape: tf.TensorShape):
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = self.add_weight(
shape=(1, num_patches, self.config.hidden_size),
initializer="zeros",
trainable=True,
name="position_embeddings",
)
super().build(input_shape)
def interpolate_pos_encoding(self, embeddings, height, width) -> tf.Tensor:
"""
This method allows to interpolate the pre-trained position encodings, to be able to use the model on higher
resolution images.
Source:
https://github.com/facebookresearch/dino/blob/de9ee3df6cf39fac952ab558447af1fa1365362a/vision_transformer.py#L174
"""
batch_size, num_patches, dim = shape_list(embeddings)
num_positions = shape_list(self.position_embeddings)[1]
if num_patches == num_positions and height == width:
return self.position_embeddings
patch_pos_embed = self.position_embeddings
h0 = height // self.config.patch_size
w0 = width // self.config.patch_size
patch_pos_embed = tf.image.resize(
images=tf.reshape(
patch_pos_embed, shape=(1, int(math.sqrt(num_positions)), int(math.sqrt(num_positions)), dim)
),
size=(h0, w0),
method="bicubic",
)
patch_pos_embed = tf.reshape(tensor=patch_pos_embed, shape=(1, -1, dim))
return patch_pos_embed
def call(
self, pixel_values: tf.Tensor, interpolate_pos_encoding: bool = False, training: bool = False
) -> tf.Tensor:
_, _, height, width = shape_list(pixel_values)
embeddings = self.patch_embeddings(pixel_values, interpolate_pos_encoding=interpolate_pos_encoding)
embeddings = self.layernorm(embeddings)
# add positional encoding to each token
if interpolate_pos_encoding:
embeddings = embeddings + self.interpolate_pos_encoding(embeddings, height, width)
else:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
# Copied from transformers.models.clip.modeling_tf_clip.TFCLIPTextEmbeddings with CLIP->GroupViT
class TFGroupViTTextEmbeddings(tf.keras.layers.Layer):
def __init__(self, config: GroupViTTextConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.config = config
def build(self, input_shape: tf.TensorShape = None):
with tf.name_scope("token_embedding"):
self.weight = self.add_weight(
shape=(self.config.vocab_size, self.embed_dim),
initializer=get_initializer(self.config.initializer_factor * self.config.initializer_range),
trainable=True,
name="weight",
)
with tf.name_scope("position_embedding"):
self.position_embedding = self.add_weight(
shape=(self.config.max_position_embeddings, self.embed_dim),
initializer=get_initializer(self.config.initializer_factor * self.config.initializer_range),
trainable=True,
name="embeddings",
)
super().build(input_shape)
def call(
self,
input_ids: tf.Tensor = None,
position_ids: tf.Tensor = None,
inputs_embeds: tf.Tensor = None,
) -> tf.Tensor:
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
if input_ids is None and inputs_embeds is None:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if inputs_embeds is None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if position_ids is None:
position_ids = tf.expand_dims(tf.range(start=0, limit=input_shape[-1]), axis=0)
position_embeds = tf.gather(params=self.position_embedding, indices=position_ids)
position_embeds = tf.tile(input=position_embeds, multiples=(input_shape[0], 1, 1))
final_embeddings = inputs_embeds + position_embeds
return final_embeddings
class TFGroupViTStage(tf.keras.layers.Layer):
"""This corresponds to the `GroupingLayer` class in the GroupViT implementation."""
def __init__(
self,
config: GroupViTVisionConfig,
depth: int,
num_prev_group_token: int,
num_group_token: int,
num_output_group: int,
**kwargs,
):
super().__init__(**kwargs)
self.config = config
self.depth = depth
self.num_group_token = num_group_token
self.layers = [TFGroupViTEncoderLayer(config, name=f"layers_._{i}") for i in range(depth)]
if num_group_token > 0:
self.downsample = TFGroupViTTokenAssign(
config=config,
num_group_token=num_group_token,
num_output_group=num_output_group,
name="downsample",
)
else:
self.downsample = None
if num_prev_group_token > 0 and num_group_token > 0:
self.group_projector = [
tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="group_projector.0"),
TFGroupViTMixerMLP(
config, num_prev_group_token, config.hidden_size // 2, num_group_token, name="group_projector.1"
),
]
else:
self.group_projector = None
def build(self, input_shape: tf.TensorShape):
if self.num_group_token > 0:
self.group_token = self.add_weight(
shape=(1, self.num_group_token, self.config.hidden_size),
initializer="zeros",
trainable=True,
name="group_token",
)
else:
self.group_token = None
super().build(input_shape)
@property
def with_group_token(self):
return self.group_token is not None
def split_x(self, x: tf.Tensor) -> tf.Tensor:
if self.with_group_token:
return x[:, : -self.num_group_token], x[:, -self.num_group_token :]
else:
return x, None
def concat_x(self, x: tf.Tensor, group_token: tf.Tensor | None = None) -> tf.Tensor:
if group_token is None:
return x
return tf.concat([x, group_token], axis=1)
def call(
self,
hidden_states: tf.Tensor,
prev_group_token: tf.Tensor | None = None,
output_attentions: bool = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`tf.Tensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the grouping tensors of Grouping block.
"""
if self.with_group_token:
group_token = tf.tile(self.group_token, multiples=(shape_list(hidden_states)[0], 1, 1))
if self.group_projector is not None:
for layer in self.group_projector:
prev_group_token = layer(prev_group_token)
group_token = group_token + prev_group_token
else:
group_token = None
x = hidden_states
cat_x = self.concat_x(x, group_token)
for layer in self.layers:
layer_out = layer(
cat_x,
attention_mask=None,
causal_attention_mask=None,
output_attentions=None,
)
cat_x = layer_out[0]
x, group_token = self.split_x(cat_x)
attention = None
if self.downsample is not None:
x, attention = self.downsample(x, group_token)
outputs = (x, group_token)
if output_attentions:
outputs = outputs + (attention,)
return outputs
class TFGroupViTMLP(tf.keras.layers.Layer):
def __init__(
self,
config: GroupViTVisionConfig,
hidden_size: Optional[int] = None,
intermediate_size: Optional[int] = None,
output_size: Optional[int] = None,
**kwargs,
):
super().__init__(**kwargs)
self.config = config
self.activation_fn = get_tf_activation(config.hidden_act)
hidden_size = hidden_size if hidden_size is not None else config.hidden_size
intermediate_size = intermediate_size if intermediate_size is not None else config.intermediate_size
output_size = output_size if output_size is not None else hidden_size
self.fc1 = tf.keras.layers.Dense(intermediate_size, name="fc1")
self.fc2 = tf.keras.layers.Dense(output_size, name="fc2")
def call(self, hidden_states: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
class TFGroupViTMixerMLP(TFGroupViTMLP):
def call(self, x, training: bool = False):
x = super().call(hidden_states=tf.transpose(x, perm=(0, 2, 1)))
return tf.transpose(x, perm=(0, 2, 1))
# Adapted from transformers.models.clip.modeling_tf_clip.TFCLIPAttention
class TFGroupViTAttention(tf.keras.layers.Layer):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config: GroupViTConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = self.embed_dim // self.num_attention_heads
if self.attention_head_size * self.num_attention_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_attention_heads})."
)
factor = config.initializer_factor
in_proj_std = (self.embed_dim**-0.5) * ((2 * config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (self.embed_dim**-0.5) * factor
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.q_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="q_proj"
)
self.k_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="k_proj"
)
self.v_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(in_proj_std), name="v_proj"
)
self.dropout = tf.keras.layers.Dropout(rate=config.attention_dropout)
self.out_proj = tf.keras.layers.Dense(
units=self.embed_dim, kernel_initializer=get_initializer(out_proj_std), name="out_proj"
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertSelfAttention.transpose_for_scores
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor = None,
causal_attention_mask: tf.Tensor = None,
output_attentions: bool = None,
encoder_hidden_states: tf.Tensor = None,
training: bool = False,
) -> Tuple[tf.Tensor]:
"""Input shape: Batch x Time x Channel"""
batch_size = shape_list(hidden_states)[0]
is_cross_attention = encoder_hidden_states is not None
mixed_query_layer = self.q_proj(inputs=hidden_states)
if is_cross_attention:
mixed_key_layer = self.k_proj(inputs=encoder_hidden_states)
mixed_value_layer = self.v_proj(inputs=encoder_hidden_states)
else:
mixed_key_layer = self.k_proj(inputs=hidden_states)
mixed_value_layer = self.v_proj(inputs=hidden_states)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
dk = tf.cast(self.sqrt_att_head_size, dtype=attention_scores.dtype)
attention_scores = tf.divide(attention_scores, dk)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
# Apply the causal attention mask (precomputed for all layers in TFCLIPModel call() function)
attention_scores = tf.add(attention_scores, causal_attention_mask)
if attention_mask is not None:
# Apply the attention mask (precomputed for all layers in TFCLIPModel call() function)
attention_scores = tf.add(attention_scores, attention_mask)
# Normalize the attention scores to probabilities.
_attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=_attention_probs)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, embed_dim)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.embed_dim))
attention_output = self.out_proj(attention_output)
# In TFBert, attention weights are returned after dropout.
# However, in CLIP, they are returned before dropout.
outputs = (attention_output, _attention_probs) if output_attentions else (attention_output,)
return outputs
# Copied from transformers.models.clip.modeling_tf_clip.TFCLIPEncoderLayer with CLIP->GroupViT
class TFGroupViTEncoderLayer(tf.keras.layers.Layer):
def __init__(self, config: GroupViTConfig, **kwargs):
super().__init__(**kwargs)
self.embed_dim = config.hidden_size
self.self_attn = TFGroupViTAttention(config, name="self_attn")
self.layer_norm1 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm1")
self.mlp = TFGroupViTMLP(config, name="mlp")
self.layer_norm2 = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm2")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
causal_attention_mask: tf.Tensor,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`tf.Tensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
causal_attention_mask (`tf.Tensor`): causal attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
output_attentions (`bool`):
Whether or not to return the attentions tensors of all attention layers. See `outputs` under returned
tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(inputs=hidden_states)
attention_outputs = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
training=training,
)
hidden_states = attention_outputs[0]
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(inputs=hidden_states)
hidden_states = self.mlp(hidden_states=hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,) + attention_outputs[1:] # add attentions if we output them
return outputs
# Adapted from transformers.models.clip.modeling_tf_clip.TFGroupViTTextEncoder
class TFGroupViTTextEncoder(tf.keras.layers.Layer):
def __init__(self, config: GroupViTTextConfig, **kwargs):
super().__init__(**kwargs)
self.layers = [TFGroupViTEncoderLayer(config, name=f"layers_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states,
attention_mask: tf.Tensor,
causal_attention_mask: tf.Tensor,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[Tuple, TFBaseModelOutput]:
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
class TFGroupViTVisionEncoder(tf.keras.layers.Layer):
def __init__(self, config: GroupViTVisionConfig, **kwargs) -> None:
super().__init__(**kwargs)
self.stages = [
TFGroupViTStage(
config=config,
depth=config.depths[i],
num_group_token=config.num_group_tokens[i],
num_output_group=config.num_output_groups[i],
num_prev_group_token=config.num_output_groups[i - 1] if i > 0 else 0,
name=f"stages_._{i}",
)
for i in range(len(config.depths))
]
def call(
self,
hidden_states: tf.Tensor,
output_hidden_states: bool,
output_attentions: bool,
return_dict: bool,
training: bool = False,
) -> Union[tuple, TFBaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_groupings = () if output_attentions else None
group_tokens = None
for stage in self.stages:
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = stage(hidden_states, group_tokens, output_attentions)
hidden_states = layer_outputs[0]
group_tokens = layer_outputs[1]
if output_attentions and layer_outputs[2] is not None:
all_groupings = all_groupings + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_groupings] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_groupings
)
# Copied from transformers.models.clip.modeling_tf_clip.TFCLIPTextTransformer with CLIPText->GroupViTText, CLIPEncoder->GroupViTTextEncoder
class TFGroupViTTextTransformer(tf.keras.layers.Layer):
def __init__(self, config: GroupViTTextConfig, **kwargs):
super().__init__(**kwargs)
self.embeddings = TFGroupViTTextEmbeddings(config, name="embeddings")
self.encoder = TFGroupViTTextEncoder(config, name="encoder")
self.final_layer_norm = tf.keras.layers.LayerNormalization(
epsilon=config.layer_norm_eps, name="final_layer_norm"
)
# For `pooled_output` computation
self.eos_token_id = config.eos_token_id
def call(
self,
input_ids: TFModelInputType,
attention_mask: tf.Tensor,
position_ids: tf.Tensor,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
input_shape = shape_list(input_ids)
embedding_output = self.embeddings(input_ids=input_ids, position_ids=position_ids)
batch_size, seq_length = input_shape
# CLIP's text model uses causal mask, prepare it here.
# https://github.com/openai/CLIP/blob/cfcffb90e69f37bf2ff1e988237a0fbe41f33c04/clip/model.py#L324
causal_attention_mask = self._build_causal_attention_mask(batch_size, seq_length, dtype=embedding_output.dtype)
# check attention mask and invert
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
attention_mask = _expand_mask(attention_mask)
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
sequence_output = self.final_layer_norm(inputs=sequence_output)
if self.eos_token_id == 2:
# The `eos_token_id` was incorrect before PR #24773: Let's keep what have been done here.
# A CLIP model with such `eos_token_id` in the config can't work correctly with extra new tokens added
# ------------------------------------------------------------
# text_embeds.shape = [batch_size, n_ctx, transformer.width]
# take features from the eot embedding (eot_token is the highest number in each sequence)
pooled_output = tf.gather_nd(
params=sequence_output,
indices=tf.stack(
values=(tf.range(input_shape[0], dtype=tf.int64), tf.math.argmax(input_ids, axis=-1)), axis=1
),
)
else:
# The config gets updated `eos_token_id` from PR #24773 (so the use of exta new tokens is possible)
pooled_output = tf.gather_nd(
params=sequence_output,
indices=tf.stack(
values=(
tf.range(input_shape[0], dtype=tf.int64),
tf.math.argmax(tf.cast(input_ids == self.eos_token_id, dtype=tf.int8), axis=-1),
),
axis=1,
),
)
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def _build_causal_attention_mask(self, batch_size, seq_length, dtype=tf.float32):
# It is possible with an unspecified sequence length for seq_length to be
# a runtime value, which is unsupported by tf.constant. Per the TensorFlow
# docs, tf.fill can handle runtime dynamic shapes:
# https://www.tensorflow.org/api_docs/python/tf/fill
diag = tf.cast(tf.fill((seq_length,), 0.0), dtype)
# set an additive 2D attention mask with all places being masked
to_mask = tf.cast(tf.fill((seq_length, seq_length), -10000.0), dtype)
# set diagonal & lower triangular parts to 0 (i.e. the places not to be masked)
# TIP: think the 2D matrix as the space of (query_seq, key_seq)
to_mask = tf.linalg.band_part(to_mask, 0, -1)
# to_mask = tf.linalg.band_part(to_mask, -1, 0)
to_mask = tf.linalg.set_diag(to_mask, diagonal=diag)
return tf.broadcast_to(input=to_mask, shape=(batch_size, 1, seq_length, seq_length))
# Adapted from transformers.models.clip.modeling_tf_clip.TFCLIPVisionTransformer
class TFGroupViTVisionTransformer(tf.keras.layers.Layer):
def __init__(self, config: GroupViTVisionConfig, **kwargs):
super().__init__(**kwargs)
self.embeddings = TFGroupViTVisionEmbeddings(config, name="embeddings")
self.encoder = TFGroupViTVisionEncoder(config, name="encoder")
self.layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm")
def call(
self,
pixel_values: TFModelInputType,
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[Tuple, TFBaseModelOutputWithPooling]:
embedding_output = self.embeddings(pixel_values)
encoder_outputs = self.encoder(
hidden_states=embedding_output,
output_hidden_states=output_hidden_states,
output_attentions=output_attentions,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
# normalize the last hidden state
last_hidden_state = self.layernorm(last_hidden_state)
pooled_output = tf.math.reduce_mean(last_hidden_state, axis=1)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@keras_serializable
# Copied from transformers.models.clip.modeling_tf_clip.TFCLIPTextMainLayer with CLIP->GroupViT
class TFGroupViTTextMainLayer(tf.keras.layers.Layer):
config_class = GroupViTTextConfig
def __init__(self, config: GroupViTTextConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.text_model = TFGroupViTTextTransformer(config, name="text_model")
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.text_model.embeddings
def set_input_embeddings(self, value: tf.Variable):
self.text_model.embeddings.weight = value
self.text_model.embeddings.vocab_size = shape_list(value)[0]
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if input_ids is None:
raise ValueError("You have to specify input_ids")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
text_model_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return text_model_outputs
@keras_serializable
# Copied from transformers.models.clip.modeling_tf_clip.TFCLIPVisionMainLayer with CLIP->GroupViT
class TFGroupViTVisionMainLayer(tf.keras.layers.Layer):
config_class = GroupViTVisionConfig
def __init__(self, config: GroupViTVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.vision_model = TFGroupViTVisionTransformer(config, name="vision_model")
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.vision_model.embeddings
@unpack_inputs
def call(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
vision_model_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return vision_model_outputs
@keras_serializable
# Adapted from transformers.models.clip.modeling_tf_clip.TFCLIPMainLayer
class TFGroupViTMainLayer(tf.keras.layers.Layer):
config_class = GroupViTConfig
def __init__(self, config: GroupViTConfig, **kwargs):
super().__init__(**kwargs)
if not isinstance(config.text_config, GroupViTTextConfig):
raise ValueError(
"config.text_config is expected to be of type GroupViTTextConfig but is of type"
f" {type(config.text_config)}."
)
if not isinstance(config.vision_config, GroupViTVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type GroupViTVisionConfig but is of type"
f" {type(config.vision_config)}."
)
self.config = config
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.projection_intermediate_dim = config.projection_intermediate_dim
self.text_embed_dim = text_config.hidden_size
self.vision_embed_dim = vision_config.hidden_size
self.text_model = TFGroupViTTextTransformer(text_config, name="text_model")
self.vision_model = TFGroupViTVisionTransformer(vision_config, name="vision_model")
self.visual_projection = [
tf.keras.layers.Dense(self.projection_intermediate_dim, name="visual_projection.0"),
tf.keras.layers.BatchNormalization(name="visual_projection.1", momentum=0.9, epsilon=1e-5),
tf.keras.layers.ReLU(name="visual_projection.2"),
tf.keras.layers.Dense(self.projection_dim, name="visual_projection.3"),
]
self.text_projection = [
tf.keras.layers.Dense(self.projection_intermediate_dim, name="text_projection.0"),
tf.keras.layers.BatchNormalization(name="text_projection.1", momentum=0.9, epsilon=1e-5),
tf.keras.layers.ReLU(name="text_projection.2"),
tf.keras.layers.Dense(self.projection_dim, name="text_projection.3"),
]
def build(self, input_shape: tf.TensorShape):
self.logit_scale = self.add_weight(
shape=(1,),
initializer=tf.keras.initializers.Constant(self.config.logit_scale_init_value),
trainable=True,
name="logit_scale",
)
super().build(input_shape)
@unpack_inputs
def get_text_features(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
if input_ids is None:
raise ValueError("You have to specify either input_ids")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = text_outputs[1]
for layer in self.text_projection:
pooled_output = layer(pooled_output)
text_features = pooled_output
return text_features
@unpack_inputs
def get_image_features(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = vision_outputs[1]
for layer in self.visual_projection:
pooled_output = layer(pooled_output)
image_features = pooled_output
return image_features
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
pixel_values: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
output_segmentation: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFGroupViTModelOutput, Tuple[tf.Tensor]]:
if input_ids is None:
raise ValueError("You have to specify either input_ids")
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
input_shape = shape_list(input_ids)
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
if output_segmentation:
output_attentions = True
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
image_embeds = vision_outputs[1]
for layer in self.visual_projection:
image_embeds = layer(image_embeds)
text_embeds = text_outputs[1]
for layer in self.text_projection:
text_embeds = layer(text_embeds)
# normalized features
image_embeds = image_embeds / tf.norm(image_embeds, axis=-1, keepdims=True)
text_embeds = text_embeds / tf.norm(text_embeds, axis=-1, keepdims=True)
# cosine similarity as logits
logit_scale = tf.math.exp(self.logit_scale)
logits_per_text = tf.matmul(text_embeds, image_embeds, transpose_b=True) * logit_scale
logits_per_image = tf.transpose(logits_per_text)
seg_logits = None
if output_segmentation:
# grouped features
# [batch_size_image, num_group, hidden_size]
image_group_embeds = vision_outputs[0]
# [batch_size_image*num_group, hidden_size]
image_group_embeds = tf.reshape(image_group_embeds, shape=(-1, shape_list(image_group_embeds)[-1]))
for layer in self.visual_projection:
image_group_embeds = layer(image_group_embeds)
if output_hidden_states:
attentions = vision_outputs[3]
else:
attentions = vision_outputs[2]
# [batch_size_image, num_group, height, width]
grouping = get_grouping_from_attentions(attentions, pixel_values.shape[2:])
# normalized features
image_group_embeds = image_group_embeds / tf.norm(
tensor=image_group_embeds, ord="euclidean", axis=-1, keepdims=True
)
# [batch_size_image x num_group, batch_size_text]
logits_per_image_group = tf.matmul(image_group_embeds, text_embeds, transpose_b=True) * logit_scale
# [batch_size_image, batch_size_text, num_group]
logits_per_image_group = tf.reshape(
logits_per_image_group, shape=(image_embeds.shape[0], -1, text_embeds.shape[0])
)
logits_per_image_group = tf.transpose(logits_per_image_group, perm=(0, 2, 1))
# [batch_size_image, batch_size_text, height x width]
flatten_grouping = tf.reshape(grouping, shape=(shape_list(grouping)[0], shape_list(grouping)[1], -1))
# [batch_size_image, batch_size_text, height, width]
seg_logits = tf.matmul(logits_per_image_group, flatten_grouping) * logit_scale
seg_logits = tf.reshape(
seg_logits, shape=(seg_logits.shape[0], seg_logits.shape[1], grouping.shape[2], grouping.shape[3])
)
loss = None
if return_loss:
loss = groupvit_loss(logits_per_text)[None, ...]
if not return_dict:
if seg_logits is not None:
output = (
logits_per_image,
logits_per_text,
seg_logits,
text_embeds,
image_embeds,
text_outputs,
vision_outputs,
)
else:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return ((loss,) + output) if loss is not None else output
return TFGroupViTModelOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
segmentation_logits=seg_logits,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
class TFGroupViTPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = GroupViTConfig
base_model_prefix = "groupvit"
GROUPVIT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TF 2.0 models accepts two formats as inputs:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional arguments.
This second option is useful when using [`tf.keras.Model.fit`] method which currently requires having all the
tensors in the first argument of the model call function: `model(inputs)`.
If you choose this second option, there are three possibilities you can use to gather all the input Tensors in the
first positional argument :
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
</Tip>
Args:
config ([`GroupViTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
GROUPVIT_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
GROUPVIT_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]`, `Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
GROUPVIT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
pixel_values (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` `Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See
[`CLIPImageProcessor.__call__`] for details.
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
class TFGroupViTTextModel(TFGroupViTPreTrainedModel):
config_class = GroupViTTextConfig
main_input_name = "input_ids"
def __init__(self, config: GroupViTTextConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.groupvit = TFGroupViTTextMainLayer(config, name="groupvit")
@unpack_inputs
@add_start_docstrings_to_model_forward(GROUPVIT_TEXT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=GroupViTTextConfig)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from transformers import CLIPTokenizer, TFGroupViTTextModel
>>> tokenizer = CLIPTokenizer.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> model = TFGroupViTTextModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled (EOS token) states
```"""
outputs = self.groupvit(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
class TFGroupViTVisionModel(TFGroupViTPreTrainedModel):
config_class = GroupViTVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: GroupViTVisionConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.groupvit = TFGroupViTVisionMainLayer(config, name="groupvit")
@unpack_inputs
@add_start_docstrings_to_model_forward(GROUPVIT_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=GroupViTVisionConfig)
def call(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFGroupViTVisionModel
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> model = TFGroupViTVisionModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
outputs = self.groupvit(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@add_start_docstrings(GROUPVIT_START_DOCSTRING)
class TFGroupViTModel(TFGroupViTPreTrainedModel):
config_class = GroupViTConfig
def __init__(self, config: GroupViTConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.groupvit = TFGroupViTMainLayer(config, name="groupvit")
@unpack_inputs
@add_start_docstrings_to_model_forward(GROUPVIT_TEXT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def get_text_features(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
r"""
Returns:
text_features (`tf.Tensor` of shape `(batch_size, output_dim`): The text embeddings obtained by applying
the projection layer to the pooled output of [`TFGroupViTTextModel`].
Examples:
```python
>>> from transformers import CLIPTokenizer, TFGroupViTModel
>>> model = TFGroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> tokenizer = CLIPTokenizer.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> inputs = tokenizer(["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="tf")
>>> text_features = model.get_text_features(**inputs)
```"""
text_features = self.groupvit.get_text_features(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return text_features
@unpack_inputs
@add_start_docstrings_to_model_forward(GROUPVIT_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: TFModelInputType | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> tf.Tensor:
r"""
Returns:
image_features (`tf.Tensor` of shape `(batch_size, output_dim`): The image embeddings obtained by applying
the projection layer to the pooled output of [`TFGroupViTVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFGroupViTModel
>>> model = TFGroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="tf")
>>> image_features = model.get_image_features(**inputs)
```"""
image_features = self.groupvit.get_image_features(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return image_features
@unpack_inputs
@add_start_docstrings_to_model_forward(GROUPVIT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFGroupViTModelOutput, config_class=GroupViTConfig)
def call(
self,
input_ids: TFModelInputType | None = None,
pixel_values: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
output_segmentation: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFGroupViTModelOutput, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, TFGroupViTModel
>>> import tensorflow as tf
>>> model = TFGroupViTModel.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> processor = AutoProcessor.from_pretrained("nvidia/groupvit-gcc-yfcc")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="tf", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = tf.math.softmax(logits_per_image, axis=1) # we can take the softmax to get the label probabilities
```"""
outputs = self.groupvit(
input_ids=input_ids,
pixel_values=pixel_values,
attention_mask=attention_mask,
position_ids=position_ids,
return_loss=return_loss,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
output_segmentation=output_segmentation,
return_dict=return_dict,
training=training,
)
return outputs
def serving_output(self, output: TFGroupViTModelOutput) -> TFGroupViTModelOutput:
# TODO: As is this currently fails with saved_model=True, because
# TensorFlow cannot trace through nested dataclasses. Reference:
# https://github.com/huggingface/transformers/pull/16886
return output
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/groupvit/convert_groupvit_nvlab_to_hf.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Convert GroupViT checkpoints from the original repository.
URL: https://github.com/NVlabs/GroupViT
"""
import argparse
import requests
import torch
from PIL import Image
from transformers import CLIPProcessor, GroupViTConfig, GroupViTModel
def rename_key(name):
# vision encoder
if "img_encoder.pos_embed" in name:
name = name.replace("img_encoder.pos_embed", "vision_model.embeddings.position_embeddings")
if "img_encoder.patch_embed.proj" in name:
name = name.replace("img_encoder.patch_embed.proj", "vision_model.embeddings.patch_embeddings.projection")
if "img_encoder.patch_embed.norm" in name:
name = name.replace("img_encoder.patch_embed.norm", "vision_model.embeddings.layernorm")
if "img_encoder.layers" in name:
name = name.replace("img_encoder.layers", "vision_model.encoder.stages")
if "blocks" in name and "res" not in name:
name = name.replace("blocks", "layers")
if "attn" in name and "pre_assign" not in name:
name = name.replace("attn", "self_attn")
if "proj" in name and "self_attn" in name and "text" not in name:
name = name.replace("proj", "out_proj")
if "pre_assign_attn.attn.proj" in name:
name = name.replace("pre_assign_attn.attn.proj", "pre_assign_attn.attn.out_proj")
if "norm1" in name:
name = name.replace("norm1", "layer_norm1")
if "norm2" in name and "pre_assign" not in name:
name = name.replace("norm2", "layer_norm2")
if "img_encoder.norm" in name:
name = name.replace("img_encoder.norm", "vision_model.layernorm")
# text encoder
if "text_encoder.token_embedding" in name:
name = name.replace("text_encoder.token_embedding", "text_model.embeddings.token_embedding")
if "text_encoder.positional_embedding" in name:
name = name.replace("text_encoder.positional_embedding", "text_model.embeddings.position_embedding.weight")
if "text_encoder.transformer.resblocks." in name:
name = name.replace("text_encoder.transformer.resblocks.", "text_model.encoder.layers.")
if "ln_1" in name:
name = name.replace("ln_1", "layer_norm1")
if "ln_2" in name:
name = name.replace("ln_2", "layer_norm2")
if "c_fc" in name:
name = name.replace("c_fc", "fc1")
if "c_proj" in name:
name = name.replace("c_proj", "fc2")
if "text_encoder" in name:
name = name.replace("text_encoder", "text_model")
if "ln_final" in name:
name = name.replace("ln_final", "final_layer_norm")
# projection layers
if "img_projector.linear_hidden." in name:
name = name.replace("img_projector.linear_hidden.", "visual_projection.")
if "img_projector.linear_out." in name:
name = name.replace("img_projector.linear_out.", "visual_projection.3.")
if "text_projector.linear_hidden" in name:
name = name.replace("text_projector.linear_hidden", "text_projection")
if "text_projector.linear_out" in name:
name = name.replace("text_projector.linear_out", "text_projection.3")
return name
def convert_state_dict(orig_state_dict, config):
for key in orig_state_dict.copy().keys():
val = orig_state_dict.pop(key)
if "qkv" in key:
# weights and biases of the key, value and query projections of vision encoder's attention layers require special treatment:
# we need to split them up into separate matrices/vectors
key_split = key.split(".")
stage_num, layer_num = int(key_split[2]), int(key_split[4])
dim = config.vision_config.hidden_size
if "weight" in key:
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.q_proj.weight"
] = val[:dim, :]
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.k_proj.weight"
] = val[dim : dim * 2, :]
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.v_proj.weight"
] = val[-dim:, :]
else:
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.q_proj.bias"
] = val[:dim]
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.k_proj.bias"
] = val[dim : dim * 2]
orig_state_dict[
f"vision_model.encoder.stages.{stage_num}.layers.{layer_num}.self_attn.v_proj.bias"
] = val[-dim:]
elif "in_proj" in key:
# weights and biases of the key, value and query projections of text encoder's attention layers require special treatment:
# we need to split them up into separate matrices/vectors
key_split = key.split(".")
layer_num = int(key_split[3])
dim = config.text_config.hidden_size
if "weight" in key:
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.q_proj.weight"] = val[:dim, :]
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.k_proj.weight"] = val[
dim : dim * 2, :
]
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.v_proj.weight"] = val[-dim:, :]
else:
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.q_proj.bias"] = val[:dim]
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.k_proj.bias"] = val[dim : dim * 2]
orig_state_dict[f"text_model.encoder.layers.{layer_num}.self_attn.v_proj.bias"] = val[-dim:]
else:
new_name = rename_key(key)
# squeeze if necessary
if (
"text_projection.0" in new_name
or "text_projection.3" in new_name
or "visual_projection.0" in new_name
or "visual_projection.3" in new_name
):
orig_state_dict[new_name] = val.squeeze_()
else:
orig_state_dict[new_name] = val
return orig_state_dict
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_groupvit_checkpoint(
checkpoint_path, pytorch_dump_folder_path, model_name="groupvit-gcc-yfcc", push_to_hub=False
):
"""
Copy/paste/tweak model's weights to the Transformers design.
"""
config = GroupViTConfig()
model = GroupViTModel(config).eval()
state_dict = torch.load(checkpoint_path, map_location="cpu")["model"]
new_state_dict = convert_state_dict(state_dict, config)
missing_keys, unexpected_keys = model.load_state_dict(new_state_dict, strict=False)
assert missing_keys == ["text_model.embeddings.position_ids"]
assert (unexpected_keys == ["multi_label_logit_scale"]) or (len(unexpected_keys) == 0)
# verify result
processor = CLIPProcessor.from_pretrained("openai/clip-vit-base-patch32")
image = prepare_img()
inputs = processor(text=["a photo of a cat", "a photo of a dog"], images=image, padding=True, return_tensors="pt")
with torch.no_grad():
outputs = model(**inputs)
if model_name == "groupvit-gcc-yfcc":
expected_logits = torch.tensor([[13.3523, 6.3629]])
elif model_name == "groupvit-gcc-redcaps":
expected_logits = torch.tensor([[16.1873, 8.6230]])
else:
raise ValueError(f"Model name {model_name} not supported.")
assert torch.allclose(outputs.logits_per_image, expected_logits, atol=1e-3)
processor.save_pretrained(pytorch_dump_folder_path)
model.save_pretrained(pytorch_dump_folder_path)
print("Successfully saved processor and model to", pytorch_dump_folder_path)
if push_to_hub:
print("Pushing to the hub...")
processor.push_to_hub(model_name, organization="nielsr")
model.push_to_hub(model_name, organization="nielsr")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to dump the processor and PyTorch model."
)
parser.add_argument("--checkpoint_path", default=None, type=str, help="Path to GroupViT checkpoint")
parser.add_argument(
"--model_name",
default="groupvit-gccy-fcc",
type=str,
help="Name of the model. Expecting either 'groupvit-gcc-yfcc' or 'groupvit-gcc-redcaps'",
)
parser.add_argument(
"--push_to_hub",
action="store_true",
help="Whether or not to push the converted model and processor to the 🤗 hub using the provided `model_name`.",
)
args = parser.parse_args()
convert_groupvit_checkpoint(args.checkpoint_path, args.pytorch_dump_folder_path, args.model_name, args.push_to_hub)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/qdqbert/configuration_qdqbert.py | # coding=utf-8
# Copyright 2021 NVIDIA Corporation and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" QDQBERT model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
QDQBERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"bert-base-uncased": "https://huggingface.co/bert-base-uncased/resolve/main/config.json",
# QDQBERT models can be loaded from any BERT checkpoint, available at https://huggingface.co/models?filter=bert
}
class QDQBertConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`QDQBertModel`]. It is used to instantiate an
QDQBERT model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the BERT
[bert-base-uncased](https://huggingface.co/bert-base-uncased) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the QDQBERT model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`QDQBertModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimension of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimension of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`QDQBertModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
Examples:
```python
>>> from transformers import QDQBertModel, QDQBertConfig
>>> # Initializing a QDQBERT bert-base-uncased style configuration
>>> configuration = QDQBertConfig()
>>> # Initializing a model from the bert-base-uncased style configuration
>>> model = QDQBertModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "qdqbert"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
use_cache=True,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.max_position_embeddings = max_position_embeddings
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.type_vocab_size = type_vocab_size
self.layer_norm_eps = layer_norm_eps
self.use_cache = use_cache
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/qdqbert/__init__.py | # Copyright 2021 NVIDIA Corporation and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {"configuration_qdqbert": ["QDQBERT_PRETRAINED_CONFIG_ARCHIVE_MAP", "QDQBertConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_qdqbert"] = [
"QDQBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"QDQBertForMaskedLM",
"QDQBertForMultipleChoice",
"QDQBertForNextSentencePrediction",
"QDQBertForQuestionAnswering",
"QDQBertForSequenceClassification",
"QDQBertForTokenClassification",
"QDQBertLayer",
"QDQBertLMHeadModel",
"QDQBertModel",
"QDQBertPreTrainedModel",
"load_tf_weights_in_qdqbert",
]
if TYPE_CHECKING:
from .configuration_qdqbert import QDQBERT_PRETRAINED_CONFIG_ARCHIVE_MAP, QDQBertConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_qdqbert import (
QDQBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
QDQBertForMaskedLM,
QDQBertForMultipleChoice,
QDQBertForNextSentencePrediction,
QDQBertForQuestionAnswering,
QDQBertForSequenceClassification,
QDQBertForTokenClassification,
QDQBertLayer,
QDQBertLMHeadModel,
QDQBertModel,
QDQBertPreTrainedModel,
load_tf_weights_in_qdqbert,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/qdqbert/modeling_qdqbert.py | # coding=utf-8
# Copyright 2021 NVIDIA Corporation and The HuggingFace Team.
# Copyright (c) 2018-2021, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch QDQBERT model."""
import math
import os
import warnings
from typing import Dict, List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
CausalLMOutputWithCrossAttentions,
MaskedLMOutput,
MultipleChoiceModelOutput,
NextSentencePredictorOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_pytorch_quantization_available,
logging,
replace_return_docstrings,
requires_backends,
)
from .configuration_qdqbert import QDQBertConfig
logger = logging.get_logger(__name__)
# soft dependency
if is_pytorch_quantization_available():
try:
from pytorch_quantization import nn as quant_nn
from pytorch_quantization.nn.modules.tensor_quantizer import TensorQuantizer
except OSError:
logger.error(
"QDQBERT model are not usable since `pytorch_quantization` can't be loaded. Please try to reinstall it"
" following the instructions here:"
" https://github.com/NVIDIA/TensorRT/tree/master/tools/pytorch-quantization."
)
_CHECKPOINT_FOR_DOC = "bert-base-uncased"
_CONFIG_FOR_DOC = "QDQBertConfig"
QDQBERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"bert-base-uncased",
# See all BERT models at https://huggingface.co/models?filter=bert
]
def load_tf_weights_in_qdqbert(model, tf_checkpoint_path):
"""Load tf checkpoints in a pytorch model."""
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
names = []
arrays = []
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
names.append(name)
arrays.append(array)
for name, array in zip(names, arrays):
name = name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
else:
try:
pointer = getattr(pointer, scope_names[0])
except AttributeError:
logger.info(f"Skipping {'/'.join(name)}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
if m_name[-11:] == "_embeddings":
pointer = getattr(pointer, "weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
if pointer.shape != array.shape:
raise ValueError(f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched")
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
return model
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings with Bert -> QDQBert
class QDQBertEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
past_key_values_length: int = 0,
) -> torch.Tensor:
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class QDQBertSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = quant_nn.QuantLinear(config.hidden_size, self.all_head_size)
self.key = quant_nn.QuantLinear(config.hidden_size, self.all_head_size)
self.value = quant_nn.QuantLinear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
self.matmul_q_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
self.matmul_k_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
self.matmul_v_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
self.matmul_a_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(
self.matmul_q_input_quantizer(query_layer), self.matmul_k_input_quantizer(key_layer.transpose(-1, -2))
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in QDQBertModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.Softmax(dim=-1)(attention_scores)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(
self.matmul_a_input_quantizer(attention_probs), self.matmul_v_input_quantizer(value_layer)
)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class QDQBertSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
# Quantize Linear layer
self.dense = quant_nn.QuantLinear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# Quantize the inputs to the residual add
self.add_local_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
self.add_residual_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
# Quantize the inputs to the residual add
add_local = self.add_local_input_quantizer(hidden_states)
add_residual = self.add_residual_input_quantizer(input_tensor)
hidden_states = self.LayerNorm(add_local + add_residual)
return hidden_states
# Based on transformers.models.bert.modeling_bert.BertAttention with Bert -> QDQBert
class QDQBertAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = QDQBertSelfAttention(config)
self.output = QDQBertSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class QDQBertIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
# Quantize Linear layer
self.dense = quant_nn.QuantLinear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class QDQBertOutput(nn.Module):
def __init__(self, config):
super().__init__()
# Quantize Linear layer
self.dense = quant_nn.QuantLinear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# Quantize the inputs to the residual add
self.add_local_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
self.add_residual_input_quantizer = TensorQuantizer(quant_nn.QuantLinear.default_quant_desc_input)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
# Quantize the inputs to the residual add
add_local = self.add_local_input_quantizer(hidden_states)
add_residual = self.add_residual_input_quantizer(input_tensor)
hidden_states = self.LayerNorm(add_local + add_residual)
return hidden_states
# Based on transformers.models.bert.modeling_bert.BertLayer with Bert -> QDQBert
class QDQBertLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_len_dim = 1
self.attention = QDQBertAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = QDQBertAttention(config)
self.intermediate = QDQBertIntermediate(config)
self.output = QDQBertOutput(config)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = self.feed_forward_chunk(attention_output)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
# Based on transformers.models.bert.modeling_bert.BertEncoder with Bert -> QDQBert
class QDQBertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([QDQBertLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPooler with Bert -> QDQBert
class QDQBertPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert -> QDQBert
class QDQBertPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Based on transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert -> QDQBert
class QDQBertLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = QDQBertPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Based on transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert -> QDQBert
class QDQBertOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = QDQBertLMPredictionHead(config)
def forward(self, sequence_output):
prediction_scores = self.predictions(sequence_output)
return prediction_scores
# Copied from transformers.models.bert.modeling_bert.BertOnlyNSPHead with Bert -> QDQBert
class QDQBertOnlyNSPHead(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, pooled_output):
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
# Based on transformers.models.bert.modeling_bert.BertPreTrainingHeads with Bert -> QDQBert
class QDQBertPreTrainingHeads(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = QDQBertLMPredictionHead(config)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output, pooled_output):
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
# Based on transformers.models.bert.modeling_bert.BertPreTrainedModel with Bert -> QDQBert
class QDQBertPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = QDQBertConfig
load_tf_weights = load_tf_weights_in_qdqbert
base_model_prefix = "bert"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
QDQBERT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`QDQBertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
QDQBERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare QDQBERT Model transformer outputting raw hidden-states without any specific head on top.",
QDQBERT_START_DOCSTRING,
)
class QDQBertModel(QDQBertPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
def __init__(self, config, add_pooling_layer: bool = True):
requires_backends(self, "pytorch_quantization")
super().__init__(config)
self.config = config
self.embeddings = QDQBertEmbeddings(config)
self.encoder = QDQBertEncoder(config)
self.pooler = QDQBertPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune: Dict[int, List[int]]):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
batch_size, seq_length = input_shape
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
batch_size, seq_length = input_shape
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
@add_start_docstrings(
"""QDQBERT Model with a `language modeling` head on top for CLM fine-tuning.""", QDQBERT_START_DOCSTRING
)
class QDQBertLMHeadModel(QDQBertPreTrainedModel):
_tied_weights_keys = ["predictions.decoder.weight", "predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if not config.is_decoder:
logger.warning("If you want to use `QDQBertLMHeadModel` as a standalone, add `is_decoder=True.`")
self.bert = QDQBertModel(config, add_pooling_layer=False)
self.cls = QDQBertOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.LongTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CausalLMOutputWithCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels n `[0, ..., config.vocab_size]`
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, QDQBertLMHeadModel, QDQBertConfig
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("bert-base-cased")
>>> config = QDQBertConfig.from_pretrained("bert-base-cased")
>>> config.is_decoder = True
>>> model = QDQBertLMHeadModel.from_pretrained("bert-base-cased", config=config)
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
lm_loss = None
if labels is not None:
# we are doing next-token prediction; shift prediction scores and input ids by one
shifted_prediction_scores = prediction_scores[:, :-1, :].contiguous()
labels = labels[:, 1:].contiguous()
loss_fct = CrossEntropyLoss()
lm_loss = loss_fct(shifted_prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((lm_loss,) + output) if lm_loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=lm_loss,
logits=prediction_scores,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(
self,
input_ids: Optional[torch.LongTensor],
past_key_values=None,
attention_mask: Optional[torch.Tensor] = None,
**model_kwargs,
):
input_shape = input_ids.shape
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_shape)
# cut decoder_input_ids if past_key_values is used
if past_key_values is not None:
past_length = past_key_values[0][0].shape[2]
# Some generation methods already pass only the last input ID
if input_ids.shape[1] > past_length:
remove_prefix_length = past_length
else:
# Default to old behavior: keep only final ID
remove_prefix_length = input_ids.shape[1] - 1
input_ids = input_ids[:, remove_prefix_length:]
return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past_key_values}
def _reorder_cache(self, past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past),
)
return reordered_past
@add_start_docstrings("""QDQBERT Model with a `language modeling` head on top.""", QDQBERT_START_DOCSTRING)
class QDQBertForMaskedLM(QDQBertPreTrainedModel):
_tied_weights_keys = ["predictions.decoder.weight", "predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `QDQBertForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.bert = QDQBertModel(config, add_pooling_layer=False)
self.cls = QDQBertOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def prepare_inputs_for_generation(
self, input_ids: torch.LongTensor, attention_mask: Optional[torch.FloatTensor] = None, **model_kwargs
):
input_shape = input_ids.shape
effective_batch_size = input_shape[0]
# add a dummy token
if self.config.pad_token_id is None:
raise ValueError("The PAD token should be defined for generation")
attention_mask = torch.cat([attention_mask, attention_mask.new_zeros((attention_mask.shape[0], 1))], dim=-1)
dummy_token = torch.full(
(effective_batch_size, 1), self.config.pad_token_id, dtype=torch.long, device=input_ids.device
)
input_ids = torch.cat([input_ids, dummy_token], dim=1)
return {"input_ids": input_ids, "attention_mask": attention_mask}
@add_start_docstrings(
"""Bert Model with a `next sentence prediction (classification)` head on top.""",
QDQBERT_START_DOCSTRING,
)
class QDQBertForNextSentencePrediction(QDQBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.bert = QDQBertModel(config)
self.cls = QDQBertOnlyNSPHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=NextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple, NextSentencePredictorOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
(see `input_ids` docstring). Indices should be in `[0, 1]`:
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, QDQBertForNextSentencePrediction
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("bert-base-uncased")
>>> model = QDQBertForNextSentencePrediction.from_pretrained("bert-base-uncased")
>>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
>>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
>>> encoding = tokenizer(prompt, next_sentence, return_tensors="pt")
>>> outputs = model(**encoding, labels=torch.LongTensor([1]))
>>> logits = outputs.logits
>>> assert logits[0, 0] < logits[0, 1] # next sentence was random
```"""
if "next_sentence_label" in kwargs:
warnings.warn(
"The `next_sentence_label` argument is deprecated and will be removed in a future version, use"
" `labels` instead.",
FutureWarning,
)
labels = kwargs.pop("next_sentence_label")
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
seq_relationship_scores = self.cls(pooled_output)
next_sentence_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
next_sentence_loss = loss_fct(seq_relationship_scores.view(-1, 2), labels.view(-1))
if not return_dict:
output = (seq_relationship_scores,) + outputs[2:]
return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output
return NextSentencePredictorOutput(
loss=next_sentence_loss,
logits=seq_relationship_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Bert Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
QDQBERT_START_DOCSTRING,
)
class QDQBertForSequenceClassification(QDQBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.bert = QDQBertModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Bert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
QDQBERT_START_DOCSTRING,
)
class QDQBertForMultipleChoice(QDQBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.bert = QDQBertModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MultipleChoiceModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
QDQBERT Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
QDQBERT_START_DOCSTRING,
)
class QDQBertForTokenClassification(QDQBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.bert = QDQBertModel(config, add_pooling_layer=False)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
QDQBERT Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
QDQBERT_START_DOCSTRING,
)
class QDQBertForQuestionAnswering(QDQBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.bert = QDQBertModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(QDQBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=QuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/pvt/configuration_pvt.py | # coding=utf-8
# Copyright 2023 Authors: Wenhai Wang, Enze Xie, Xiang Li, Deng-Ping Fan,
# Kaitao Song, Ding Liang, Tong Lu, Ping Luo, Ling Shao and The HuggingFace Inc. team.
# All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Pvt model configuration"""
from collections import OrderedDict
from typing import Callable, List, Mapping
from packaging import version
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
PVT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"pvt-tiny-224": "https://huggingface.co/Zetatech/pvt-tiny-224",
# See all PVT models at https://huggingface.co/models?filter=pvt
}
class PvtConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`PvtModel`]. It is used to instantiate an Pvt
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the Pvt
[Xrenya/pvt-tiny-224](https://huggingface.co/Xrenya/pvt-tiny-224) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
image_size (`int`, *optional*, defaults to 224):
The input image size
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
num_encoder_blocks (`int`, *optional*, defaults to 4):
The number of encoder blocks (i.e. stages in the Mix Transformer encoder).
depths (`List[int]`, *optional*, defaults to `[2, 2, 2, 2]`):
The number of layers in each encoder block.
sequence_reduction_ratios (`List[int]`, *optional*, defaults to `[8, 4, 2, 1]`):
Sequence reduction ratios in each encoder block.
hidden_sizes (`List[int]`, *optional*, defaults to `[64, 128, 320, 512]`):
Dimension of each of the encoder blocks.
patch_sizes (`List[int]`, *optional*, defaults to `[4, 2, 2, 2]`):
Patch size before each encoder block.
strides (`List[int]`, *optional*, defaults to `[4, 2, 2, 2]`):
Stride before each encoder block.
num_attention_heads (`List[int]`, *optional*, defaults to `[1, 2, 5, 8]`):
Number of attention heads for each attention layer in each block of the Transformer encoder.
mlp_ratios (`List[int]`, *optional*, defaults to `[8, 8, 4, 4]`):
Ratio of the size of the hidden layer compared to the size of the input layer of the Mix FFNs in the
encoder blocks.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
drop_path_rate (`float`, *optional*, defaults to 0.0):
The dropout probability for stochastic depth, used in the blocks of the Transformer encoder.
layer_norm_eps (`float`, *optional*, defaults to 1e-06):
The epsilon used by the layer normalization layers.
qkv_bias (`bool`, *optional*, defaults to `True`):
Whether or not a learnable bias should be added to the queries, keys and values.
num_labels ('int', *optional*, defaults to 1000):
The number of classes.
Example:
```python
>>> from transformers import PvtModel, PvtConfig
>>> # Initializing a PVT Xrenya/pvt-tiny-224 style configuration
>>> configuration = PvtConfig()
>>> # Initializing a model from the Xrenya/pvt-tiny-224 style configuration
>>> model = PvtModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "pvt"
def __init__(
self,
image_size: int = 224,
num_channels: int = 3,
num_encoder_blocks: int = 4,
depths: List[int] = [2, 2, 2, 2],
sequence_reduction_ratios: List[int] = [8, 4, 2, 1],
hidden_sizes: List[int] = [64, 128, 320, 512],
patch_sizes: List[int] = [4, 2, 2, 2],
strides: List[int] = [4, 2, 2, 2],
num_attention_heads: List[int] = [1, 2, 5, 8],
mlp_ratios: List[int] = [8, 8, 4, 4],
hidden_act: Mapping[str, Callable] = "gelu",
hidden_dropout_prob: float = 0.0,
attention_probs_dropout_prob: float = 0.0,
initializer_range: float = 0.02,
drop_path_rate: float = 0.0,
layer_norm_eps: float = 1e-6,
qkv_bias: bool = True,
num_labels: int = 1000,
**kwargs,
):
super().__init__(**kwargs)
self.image_size = image_size
self.num_channels = num_channels
self.num_encoder_blocks = num_encoder_blocks
self.depths = depths
self.sequence_reduction_ratios = sequence_reduction_ratios
self.hidden_sizes = hidden_sizes
self.patch_sizes = patch_sizes
self.strides = strides
self.mlp_ratios = mlp_ratios
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.drop_path_rate = drop_path_rate
self.layer_norm_eps = layer_norm_eps
self.num_labels = num_labels
self.qkv_bias = qkv_bias
class PvtOnnxConfig(OnnxConfig):
torch_onnx_minimum_version = version.parse("1.11")
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
@property
def default_onnx_opset(self) -> int:
return 12
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/pvt/__init__.py | # coding=utf-8
# Copyright 2023 Authors: Wenhai Wang, Enze Xie, Xiang Li, Deng-Ping Fan,
# Kaitao Song, Ding Liang, Tong Lu, Ping Luo, Ling Shao and The HuggingFace Inc. team.
# All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_torch_available,
is_vision_available,
)
_import_structure = {
"configuration_pvt": ["PVT_PRETRAINED_CONFIG_ARCHIVE_MAP", "PvtConfig", "PvtOnnxConfig"],
}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["image_processing_pvt"] = ["PvtImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_pvt"] = [
"PVT_PRETRAINED_MODEL_ARCHIVE_LIST",
"PvtForImageClassification",
"PvtModel",
"PvtPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_pvt import PVT_PRETRAINED_CONFIG_ARCHIVE_MAP, PvtConfig, PvtOnnxConfig
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .image_processing_pvt import PvtImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_pvt import (
PVT_PRETRAINED_MODEL_ARCHIVE_LIST,
PvtForImageClassification,
PvtModel,
PvtPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/pvt/image_processing_pvt.py | # coding=utf-8
# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for Pvt."""
from typing import Dict, List, Optional, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import resize, to_channel_dimension_format
from ...image_utils import (
IMAGENET_DEFAULT_MEAN,
IMAGENET_DEFAULT_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
infer_channel_dimension_format,
is_scaled_image,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, logging
logger = logging.get_logger(__name__)
class PvtImageProcessor(BaseImageProcessor):
r"""
Constructs a PVT image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions to the specified `(size["height"],
size["width"])`. Can be overridden by the `do_resize` parameter in the `preprocess` method.
size (`dict`, *optional*, defaults to `{"height": 224, "width": 224}`):
Size of the output image after resizing. Can be overridden by the `size` parameter in the `preprocess`
method.
resample (`PILImageResampling`, *optional*, defaults to `Resampling.BILINEAR`):
Resampling filter to use if resizing the image. Can be overridden by the `resample` parameter in the
`preprocess` method.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overridden by the `do_rescale`
parameter in the `preprocess` method.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overridden by the `rescale_factor` parameter in the
`preprocess` method.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_DEFAULT_STD`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Optional[Dict[str, int]] = None,
resample: PILImageResampling = PILImageResampling.BILINEAR,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"height": 224, "width": 224}
size = get_size_dict(size)
self.do_resize = do_resize
self.do_rescale = do_rescale
self.do_normalize = do_normalize
self.size = size
self.resample = resample
self.rescale_factor = rescale_factor
self.image_mean = image_mean if image_mean is not None else IMAGENET_DEFAULT_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_DEFAULT_STD
# Copied from transformers.models.vit.image_processing_vit.ViTImageProcessor.resize
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
resample: PILImageResampling = PILImageResampling.BILINEAR,
data_format: Optional[Union[str, ChannelDimension]] = None,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image to `(size["height"], size["width"])`.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Dictionary in the format `{"height": int, "width": int}` specifying the size of the output image.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
`PILImageResampling` filter to use when resizing the image e.g. `PILImageResampling.BILINEAR`.
data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the output image. If unset, the channel dimension format of the input
image is used. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- `"none"` or `ChannelDimension.NONE`: image in (height, width) format.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the input image. If unset, the channel dimension format is inferred
from the input image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- `"none"` or `ChannelDimension.NONE`: image in (height, width) format.
Returns:
`np.ndarray`: The resized image.
"""
size = get_size_dict(size)
if "height" not in size or "width" not in size:
raise ValueError(f"The `size` dictionary must contain the keys `height` and `width`. Got {size.keys()}")
output_size = (size["height"], size["width"])
return resize(
image,
size=output_size,
resample=resample,
data_format=data_format,
input_data_format=input_data_format,
**kwargs,
)
def preprocess(
self,
images: ImageInput,
do_resize: Optional[bool] = None,
size: Dict[str, int] = None,
resample: PILImageResampling = None,
do_rescale: Optional[bool] = None,
rescale_factor: Optional[float] = None,
do_normalize: Optional[bool] = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: Union[str, ChannelDimension] = ChannelDimension.FIRST,
input_data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess. Expects a single or batch of images with pixel values ranging from 0 to 255. If
passing in images with pixel values between 0 and 1, set `do_rescale=False`.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Dictionary in the format `{"height": h, "width": w}` specifying the size of the output image after
resizing.
resample (`PILImageResampling` filter, *optional*, defaults to `self.resample`):
`PILImageResampling` filter to use if resizing the image e.g. `PILImageResampling.BILINEAR`. Only has
an effect if `do_resize` is set to `True`.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image values between [0 - 1].
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean to use if `do_normalize` is set to `True`.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation to use if `do_normalize` is set to `True`.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- Unset: Use the channel dimension format of the input image.
input_data_format (`ChannelDimension` or `str`, *optional*):
The channel dimension format for the input image. If unset, the channel dimension format is inferred
from the input image. Can be one of:
- `"channels_first"` or `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `"channels_last"` or `ChannelDimension.LAST`: image in (height, width, num_channels) format.
- `"none"` or `ChannelDimension.NONE`: image in (height, width) format.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
resample = resample if resample is not None else self.resample
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
size = size if size is not None else self.size
size_dict = get_size_dict(size)
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None:
raise ValueError("Size must be specified if do_resize is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
if is_scaled_image(images[0]) and do_rescale:
logger.warning_once(
"It looks like you are trying to rescale already rescaled images. If the input"
" images have pixel values between 0 and 1, set `do_rescale=False` to avoid rescaling them again."
)
if input_data_format is None:
# We assume that all images have the same channel dimension format.
input_data_format = infer_channel_dimension_format(images[0])
if do_resize:
images = [
self.resize(image=image, size=size_dict, resample=resample, input_data_format=input_data_format)
for image in images
]
if do_rescale:
images = [
self.rescale(image=image, scale=rescale_factor, input_data_format=input_data_format)
for image in images
]
if do_normalize:
images = [
self.normalize(image=image, mean=image_mean, std=image_std, input_data_format=input_data_format)
for image in images
]
images = [
to_channel_dimension_format(image, data_format, input_channel_dim=input_data_format) for image in images
]
data = {"pixel_values": images}
return BatchFeature(data=data, tensor_type=return_tensors)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/pvt/convert_pvt_to_pytorch.py | # coding=utf-8
# Copyright 2023 Authors: Wenhai Wang, Enze Xie, Xiang Li, Deng-Ping Fan,
# Kaitao Song, Ding Liang, Tong Lu, Ping Luo, Ling Shao and The HuggingFace Inc. team.
# All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Pvt checkpoints from the original library."""
import argparse
from pathlib import Path
import requests
import torch
from PIL import Image
from transformers import PvtConfig, PvtForImageClassification, PvtImageProcessor
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
# here we list all keys to be renamed (original name on the left, our name on the right)
def create_rename_keys(config):
rename_keys = []
for i in range(config.num_encoder_blocks):
# Remane embedings' paramters
rename_keys.append((f"pos_embed{i + 1}", f"pvt.encoder.patch_embeddings.{i}.position_embeddings"))
rename_keys.append((f"patch_embed{i + 1}.proj.weight", f"pvt.encoder.patch_embeddings.{i}.projection.weight"))
rename_keys.append((f"patch_embed{i + 1}.proj.bias", f"pvt.encoder.patch_embeddings.{i}.projection.bias"))
rename_keys.append((f"patch_embed{i + 1}.norm.weight", f"pvt.encoder.patch_embeddings.{i}.layer_norm.weight"))
rename_keys.append((f"patch_embed{i + 1}.norm.bias", f"pvt.encoder.patch_embeddings.{i}.layer_norm.bias"))
for j in range(config.depths[i]):
# Rename blocks' parameters
rename_keys.append(
(f"block{i + 1}.{j}.attn.q.weight", f"pvt.encoder.block.{i}.{j}.attention.self.query.weight")
)
rename_keys.append(
(f"block{i + 1}.{j}.attn.q.bias", f"pvt.encoder.block.{i}.{j}.attention.self.query.bias")
)
rename_keys.append(
(f"block{i + 1}.{j}.attn.kv.weight", f"pvt.encoder.block.{i}.{j}.attention.self.kv.weight")
)
rename_keys.append((f"block{i + 1}.{j}.attn.kv.bias", f"pvt.encoder.block.{i}.{j}.attention.self.kv.bias"))
if config.sequence_reduction_ratios[i] > 1:
rename_keys.append(
(
f"block{i + 1}.{j}.attn.norm.weight",
f"pvt.encoder.block.{i}.{j}.attention.self.layer_norm.weight",
)
)
rename_keys.append(
(f"block{i + 1}.{j}.attn.norm.bias", f"pvt.encoder.block.{i}.{j}.attention.self.layer_norm.bias")
)
rename_keys.append(
(
f"block{i + 1}.{j}.attn.sr.weight",
f"pvt.encoder.block.{i}.{j}.attention.self.sequence_reduction.weight",
)
)
rename_keys.append(
(
f"block{i + 1}.{j}.attn.sr.bias",
f"pvt.encoder.block.{i}.{j}.attention.self.sequence_reduction.bias",
)
)
rename_keys.append(
(f"block{i + 1}.{j}.attn.proj.weight", f"pvt.encoder.block.{i}.{j}.attention.output.dense.weight")
)
rename_keys.append(
(f"block{i + 1}.{j}.attn.proj.bias", f"pvt.encoder.block.{i}.{j}.attention.output.dense.bias")
)
rename_keys.append((f"block{i + 1}.{j}.norm1.weight", f"pvt.encoder.block.{i}.{j}.layer_norm_1.weight"))
rename_keys.append((f"block{i + 1}.{j}.norm1.bias", f"pvt.encoder.block.{i}.{j}.layer_norm_1.bias"))
rename_keys.append((f"block{i + 1}.{j}.norm2.weight", f"pvt.encoder.block.{i}.{j}.layer_norm_2.weight"))
rename_keys.append((f"block{i + 1}.{j}.norm2.bias", f"pvt.encoder.block.{i}.{j}.layer_norm_2.bias"))
rename_keys.append((f"block{i + 1}.{j}.mlp.fc1.weight", f"pvt.encoder.block.{i}.{j}.mlp.dense1.weight"))
rename_keys.append((f"block{i + 1}.{j}.mlp.fc1.bias", f"pvt.encoder.block.{i}.{j}.mlp.dense1.bias"))
rename_keys.append((f"block{i + 1}.{j}.mlp.fc2.weight", f"pvt.encoder.block.{i}.{j}.mlp.dense2.weight"))
rename_keys.append((f"block{i + 1}.{j}.mlp.fc2.bias", f"pvt.encoder.block.{i}.{j}.mlp.dense2.bias"))
# Rename cls token
rename_keys.extend(
[
("cls_token", "pvt.encoder.patch_embeddings.3.cls_token"),
]
)
# Rename norm layer and classifier layer
rename_keys.extend(
[
("norm.weight", "pvt.encoder.layer_norm.weight"),
("norm.bias", "pvt.encoder.layer_norm.bias"),
("head.weight", "classifier.weight"),
("head.bias", "classifier.bias"),
]
)
return rename_keys
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_k_v(state_dict, config):
# for each of the encoder blocks:
for i in range(config.num_encoder_blocks):
for j in range(config.depths[i]):
# read in weights + bias of keys and values (which is a single matrix in the original implementation)
kv_weight = state_dict.pop(f"pvt.encoder.block.{i}.{j}.attention.self.kv.weight")
kv_bias = state_dict.pop(f"pvt.encoder.block.{i}.{j}.attention.self.kv.bias")
# next, add keys and values (in that order) to the state dict
state_dict[f"pvt.encoder.block.{i}.{j}.attention.self.key.weight"] = kv_weight[: config.hidden_sizes[i], :]
state_dict[f"pvt.encoder.block.{i}.{j}.attention.self.key.bias"] = kv_bias[: config.hidden_sizes[i]]
state_dict[f"pvt.encoder.block.{i}.{j}.attention.self.value.weight"] = kv_weight[
config.hidden_sizes[i] :, :
]
state_dict[f"pvt.encoder.block.{i}.{j}.attention.self.value.bias"] = kv_bias[config.hidden_sizes[i] :]
def rename_key(dct, old, new):
val = dct.pop(old)
dct[new] = val
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_pvt_checkpoint(pvt_size, pvt_checkpoint, pytorch_dump_folder_path):
"""
Copy/paste/tweak model's weights to our PVT structure.
"""
# define default Pvt configuration
if pvt_size == "tiny":
config_path = "Zetatech/pvt-tiny-224"
elif pvt_size == "small":
config_path = "Zetatech/pvt-small-224"
elif pvt_size == "medium":
config_path = "Zetatech/pvt-medium-224"
elif pvt_size == "large":
config_path = "Zetatech/pvt-large-224"
else:
raise ValueError(f"Available model's size: 'tiny', 'small', 'medium', 'large', but " f"'{pvt_size}' was given")
config = PvtConfig(name_or_path=config_path)
# load original model from https://github.com/whai362/PVT
state_dict = torch.load(pvt_checkpoint, map_location="cpu")
rename_keys = create_rename_keys(config)
for src, dest in rename_keys:
rename_key(state_dict, src, dest)
read_in_k_v(state_dict, config)
# load HuggingFace model
model = PvtForImageClassification(config).eval()
model.load_state_dict(state_dict)
# Check outputs on an image, prepared by PVTFeatureExtractor
image_processor = PvtImageProcessor(size=config.image_size)
encoding = image_processor(images=prepare_img(), return_tensors="pt")
pixel_values = encoding["pixel_values"]
outputs = model(pixel_values)
logits = outputs.logits.detach().cpu()
if pvt_size == "tiny":
expected_slice_logits = torch.tensor([-1.4192, -1.9158, -0.9702])
elif pvt_size == "small":
expected_slice_logits = torch.tensor([0.4353, -0.1960, -0.2373])
elif pvt_size == "medium":
expected_slice_logits = torch.tensor([-0.2914, -0.2231, 0.0321])
elif pvt_size == "large":
expected_slice_logits = torch.tensor([0.3740, -0.7739, -0.4214])
else:
raise ValueError(f"Available model's size: 'tiny', 'small', 'medium', 'large', but " f"'{pvt_size}' was given")
assert torch.allclose(logits[0, :3], expected_slice_logits, atol=1e-4)
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
print(f"Saving model pytorch_model.bin to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving image processor to {pytorch_dump_folder_path}")
image_processor.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--pvt_size",
default="tiny",
type=str,
help="Size of the PVT pretrained model you'd like to convert.",
)
parser.add_argument(
"--pvt_checkpoint",
default="pvt_tiny.pth",
type=str,
help="Checkpoint of the PVT pretrained model you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model directory."
)
args = parser.parse_args()
convert_pvt_checkpoint(args.pvt_size, args.pvt_checkpoint, args.pytorch_dump_folder_path)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/pvt/modeling_pvt.py | # coding=utf-8
# Copyright 2023 Authors: Wenhai Wang, Enze Xie, Xiang Li, Deng-Ping Fan,
# Kaitao Song, Ding Liang, Tong Lu, Ping Luo, Ling Shao and The HuggingFace Inc. team.
# All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch PVT model."""
import collections
import math
from typing import Iterable, Optional, Tuple, Union
import torch
import torch.nn.functional as F
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, ImageClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
)
from .configuration_pvt import PvtConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "PvtConfig"
_CHECKPOINT_FOR_DOC = "Zetatech/pvt-tiny-224"
_EXPECTED_OUTPUT_SHAPE = [1, 50, 512]
_IMAGE_CLASS_CHECKPOINT = "Zetatech/pvt-tiny-224"
_IMAGE_CLASS_EXPECTED_OUTPUT = "tabby, tabby cat"
PVT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"Zetatech/pvt-tiny-224"
# See all PVT models at https://huggingface.co/models?filter=pvt
]
# Copied from transformers.models.beit.modeling_beit.drop_path
def drop_path(input: torch.Tensor, drop_prob: float = 0.0, training: bool = False) -> torch.Tensor:
"""
Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
Comment by Ross Wightman: This is the same as the DropConnect impl I created for EfficientNet, etc networks,
however, the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for changing the
layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use 'survival rate' as the
argument.
"""
if drop_prob == 0.0 or not training:
return input
keep_prob = 1 - drop_prob
shape = (input.shape[0],) + (1,) * (input.ndim - 1) # work with diff dim tensors, not just 2D ConvNets
random_tensor = keep_prob + torch.rand(shape, dtype=input.dtype, device=input.device)
random_tensor.floor_() # binarize
output = input.div(keep_prob) * random_tensor
return output
# Copied from transformers.models.convnext.modeling_convnext.ConvNextDropPath with ConvNext->Pvt
class PvtDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob)
class PvtPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(
self,
config: PvtConfig,
image_size: Union[int, Iterable[int]],
patch_size: Union[int, Iterable[int]],
stride: int,
num_channels: int,
hidden_size: int,
cls_token: bool = False,
):
super().__init__()
self.config = config
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.position_embeddings = nn.Parameter(
torch.randn(1, num_patches + 1 if cls_token else num_patches, hidden_size)
)
self.cls_token = nn.Parameter(torch.zeros(1, 1, hidden_size)) if cls_token else None
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=stride, stride=patch_size)
self.layer_norm = nn.LayerNorm(hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(p=config.hidden_dropout_prob)
def interpolate_pos_encoding(self, embeddings: torch.Tensor, height: int, width: int) -> torch.Tensor:
num_patches = height * width
if num_patches == self.config.image_size * self.config.image_size:
return self.position_embeddings
embeddings = embeddings.reshape(1, height, width, -1).permute(0, 3, 1, 2)
interpolated_embeddings = F.interpolate(embeddings, size=(height, width), mode="bilinear")
interpolated_embeddings = interpolated_embeddings.reshape(1, -1, height * width).permute(0, 2, 1)
return interpolated_embeddings
def forward(self, pixel_values: torch.Tensor) -> Tuple[torch.Tensor, int, int]:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
patch_embed = self.projection(pixel_values)
*_, height, width = patch_embed.shape
patch_embed = patch_embed.flatten(2).transpose(1, 2)
embeddings = self.layer_norm(patch_embed)
if self.cls_token is not None:
cls_token = self.cls_token.expand(batch_size, -1, -1)
embeddings = torch.cat((cls_token, embeddings), dim=1)
position_embeddings = self.interpolate_pos_encoding(self.position_embeddings[:, 1:], height, width)
position_embeddings = torch.cat((self.position_embeddings[:, :1], position_embeddings), dim=1)
else:
position_embeddings = self.interpolate_pos_encoding(self.position_embeddings, height, width)
embeddings = self.dropout(embeddings + position_embeddings)
return embeddings, height, width
class PvtSelfOutput(nn.Module):
def __init__(self, config: PvtConfig, hidden_size: int):
super().__init__()
self.dense = nn.Linear(hidden_size, hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class PvtEfficientSelfAttention(nn.Module):
"""Efficient self-attention mechanism with reduction of the sequence [PvT paper](https://arxiv.org/abs/2102.12122)."""
def __init__(
self, config: PvtConfig, hidden_size: int, num_attention_heads: int, sequences_reduction_ratio: float
):
super().__init__()
self.hidden_size = hidden_size
self.num_attention_heads = num_attention_heads
if self.hidden_size % self.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({self.hidden_size}) is not a multiple of the number of attention "
f"heads ({self.num_attention_heads})"
)
self.attention_head_size = int(self.hidden_size / self.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(self.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(self.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(self.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.sequences_reduction_ratio = sequences_reduction_ratio
if sequences_reduction_ratio > 1:
self.sequence_reduction = nn.Conv2d(
hidden_size, hidden_size, kernel_size=sequences_reduction_ratio, stride=sequences_reduction_ratio
)
self.layer_norm = nn.LayerNorm(hidden_size, eps=config.layer_norm_eps)
def transpose_for_scores(self, hidden_states: int) -> torch.Tensor:
new_shape = hidden_states.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
hidden_states = hidden_states.view(new_shape)
return hidden_states.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
height: int,
width: int,
output_attentions: bool = False,
) -> Tuple[torch.Tensor]:
query_layer = self.transpose_for_scores(self.query(hidden_states))
if self.sequences_reduction_ratio > 1:
batch_size, seq_len, num_channels = hidden_states.shape
# Reshape to (batch_size, num_channels, height, width)
hidden_states = hidden_states.permute(0, 2, 1).reshape(batch_size, num_channels, height, width)
# Apply sequence reduction
hidden_states = self.sequence_reduction(hidden_states)
# Reshape back to (batch_size, seq_len, num_channels)
hidden_states = hidden_states.reshape(batch_size, num_channels, -1).permute(0, 2, 1)
hidden_states = self.layer_norm(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class PvtAttention(nn.Module):
def __init__(
self, config: PvtConfig, hidden_size: int, num_attention_heads: int, sequences_reduction_ratio: float
):
super().__init__()
self.self = PvtEfficientSelfAttention(
config,
hidden_size=hidden_size,
num_attention_heads=num_attention_heads,
sequences_reduction_ratio=sequences_reduction_ratio,
)
self.output = PvtSelfOutput(config, hidden_size=hidden_size)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self, hidden_states: torch.Tensor, height: int, width: int, output_attentions: bool = False
) -> Tuple[torch.Tensor]:
self_outputs = self.self(hidden_states, height, width, output_attentions)
attention_output = self.output(self_outputs[0])
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class PvtFFN(nn.Module):
def __init__(
self,
config: PvtConfig,
in_features: int,
hidden_features: Optional[int] = None,
out_features: Optional[int] = None,
):
super().__init__()
out_features = out_features if out_features is not None else in_features
self.dense1 = nn.Linear(in_features, hidden_features)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
self.dense2 = nn.Linear(hidden_features, out_features)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense1(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.dense2(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class PvtLayer(nn.Module):
def __init__(
self,
config: PvtConfig,
hidden_size: int,
num_attention_heads: int,
drop_path: float,
sequences_reduction_ratio: float,
mlp_ratio: float,
):
super().__init__()
self.layer_norm_1 = nn.LayerNorm(hidden_size, eps=config.layer_norm_eps)
self.attention = PvtAttention(
config=config,
hidden_size=hidden_size,
num_attention_heads=num_attention_heads,
sequences_reduction_ratio=sequences_reduction_ratio,
)
self.drop_path = PvtDropPath(drop_path) if drop_path > 0.0 else nn.Identity()
self.layer_norm_2 = nn.LayerNorm(hidden_size, eps=config.layer_norm_eps)
mlp_hidden_size = int(hidden_size * mlp_ratio)
self.mlp = PvtFFN(config=config, in_features=hidden_size, hidden_features=mlp_hidden_size)
def forward(self, hidden_states: torch.Tensor, height: int, width: int, output_attentions: bool = False):
self_attention_outputs = self.attention(
hidden_states=self.layer_norm_1(hidden_states),
height=height,
width=width,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:]
attention_output = self.drop_path(attention_output)
hidden_states = attention_output + hidden_states
mlp_output = self.mlp(self.layer_norm_2(hidden_states))
mlp_output = self.drop_path(mlp_output)
layer_output = hidden_states + mlp_output
outputs = (layer_output,) + outputs
return outputs
class PvtEncoder(nn.Module):
def __init__(self, config: PvtConfig):
super().__init__()
self.config = config
# stochastic depth decay rule
drop_path_decays = torch.linspace(0, config.drop_path_rate, sum(config.depths)).tolist()
# patch embeddings
embeddings = []
for i in range(config.num_encoder_blocks):
embeddings.append(
PvtPatchEmbeddings(
config=config,
image_size=config.image_size if i == 0 else self.config.image_size // (2 ** (i + 1)),
patch_size=config.patch_sizes[i],
stride=config.strides[i],
num_channels=config.num_channels if i == 0 else config.hidden_sizes[i - 1],
hidden_size=config.hidden_sizes[i],
cls_token=i == config.num_encoder_blocks - 1,
)
)
self.patch_embeddings = nn.ModuleList(embeddings)
# Transformer blocks
blocks = []
cur = 0
for i in range(config.num_encoder_blocks):
# each block consists of layers
layers = []
if i != 0:
cur += config.depths[i - 1]
for j in range(config.depths[i]):
layers.append(
PvtLayer(
config=config,
hidden_size=config.hidden_sizes[i],
num_attention_heads=config.num_attention_heads[i],
drop_path=drop_path_decays[cur + j],
sequences_reduction_ratio=config.sequence_reduction_ratios[i],
mlp_ratio=config.mlp_ratios[i],
)
)
blocks.append(nn.ModuleList(layers))
self.block = nn.ModuleList(blocks)
# Layer norms
self.layer_norm = nn.LayerNorm(config.hidden_sizes[-1], eps=config.layer_norm_eps)
def forward(
self,
pixel_values: torch.FloatTensor,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
batch_size = pixel_values.shape[0]
num_blocks = len(self.block)
hidden_states = pixel_values
for idx, (embedding_layer, block_layer) in enumerate(zip(self.patch_embeddings, self.block)):
# first, obtain patch embeddings
hidden_states, height, width = embedding_layer(hidden_states)
# second, send embeddings through blocks
for block in block_layer:
layer_outputs = block(hidden_states, height, width, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if idx != num_blocks - 1:
hidden_states = hidden_states.reshape(batch_size, height, width, -1).permute(0, 3, 1, 2).contiguous()
hidden_states = self.layer_norm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class PvtPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = PvtConfig
base_model_prefix = "pvt"
main_input_name = "pixel_values"
def _init_weights(self, module: Union[nn.Linear, nn.Conv2d, nn.LayerNorm]) -> None:
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Upcast the input in `fp32` and cast it back to desired `dtype` to avoid
# `trunc_normal_cpu` not implemented in `half` issues
module.weight.data = nn.init.trunc_normal_(module.weight.data, mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, PvtPatchEmbeddings):
module.position_embeddings.data = nn.init.trunc_normal_(
module.position_embeddings.data,
mean=0.0,
std=self.config.initializer_range,
)
if module.cls_token is not None:
module.cls_token.data = nn.init.trunc_normal_(
module.cls_token.data,
mean=0.0,
std=self.config.initializer_range,
)
PVT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`~PvtConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
PVT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See [`PvtImageProcessor.__call__`]
for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Pvt encoder outputting raw hidden-states without any specific head on top.",
PVT_START_DOCSTRING,
)
class PvtModel(PvtPreTrainedModel):
def __init__(self, config: PvtConfig):
super().__init__(config)
self.config = config
# hierarchical Transformer encoder
self.encoder = PvtEncoder(config)
# Initialize weights and apply final processing
self.post_init()
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(PVT_INPUTS_DOCSTRING.format("(batch_size, channels, height, width)"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutput,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: torch.FloatTensor,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_outputs = self.encoder(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
if not return_dict:
return (sequence_output,) + encoder_outputs[1:]
return BaseModelOutput(
last_hidden_state=sequence_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""
Pvt Model transformer with an image classification head on top (a linear layer on top of the final hidden state of
the [CLS] token) e.g. for ImageNet.
""",
PVT_START_DOCSTRING,
)
class PvtForImageClassification(PvtPreTrainedModel):
def __init__(self, config: PvtConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.pvt = PvtModel(config)
# Classifier head
self.classifier = (
nn.Linear(config.hidden_sizes[-1], config.num_labels) if config.num_labels > 0 else nn.Identity()
)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(PVT_INPUTS_DOCSTRING.format("(batch_size, channels, height, width)"))
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=ImageClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def forward(
self,
pixel_values: Optional[torch.Tensor],
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, ImageClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.pvt(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output[:, 0, :])
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/mluke/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_sentencepiece_available
_import_structure = {}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mluke"] = ["MLukeTokenizer"]
if TYPE_CHECKING:
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mluke import MLukeTokenizer
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/mluke/convert_mluke_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert mLUKE checkpoint."""
import argparse
import json
import os
from collections import OrderedDict
import torch
from transformers import LukeConfig, LukeForMaskedLM, MLukeTokenizer, XLMRobertaTokenizer
from transformers.tokenization_utils_base import AddedToken
@torch.no_grad()
def convert_luke_checkpoint(checkpoint_path, metadata_path, entity_vocab_path, pytorch_dump_folder_path, model_size):
# Load configuration defined in the metadata file
with open(metadata_path) as metadata_file:
metadata = json.load(metadata_file)
config = LukeConfig(use_entity_aware_attention=True, **metadata["model_config"])
# Load in the weights from the checkpoint_path
state_dict = torch.load(checkpoint_path, map_location="cpu")["module"]
# Load the entity vocab file
entity_vocab = load_original_entity_vocab(entity_vocab_path)
# add an entry for [MASK2]
entity_vocab["[MASK2]"] = max(entity_vocab.values()) + 1
config.entity_vocab_size += 1
tokenizer = XLMRobertaTokenizer.from_pretrained(metadata["model_config"]["bert_model_name"])
# Add special tokens to the token vocabulary for downstream tasks
entity_token_1 = AddedToken("<ent>", lstrip=False, rstrip=False)
entity_token_2 = AddedToken("<ent2>", lstrip=False, rstrip=False)
tokenizer.add_special_tokens({"additional_special_tokens": [entity_token_1, entity_token_2]})
config.vocab_size += 2
print(f"Saving tokenizer to {pytorch_dump_folder_path}")
tokenizer.save_pretrained(pytorch_dump_folder_path)
with open(os.path.join(pytorch_dump_folder_path, "tokenizer_config.json"), "r") as f:
tokenizer_config = json.load(f)
tokenizer_config["tokenizer_class"] = "MLukeTokenizer"
with open(os.path.join(pytorch_dump_folder_path, "tokenizer_config.json"), "w") as f:
json.dump(tokenizer_config, f)
with open(os.path.join(pytorch_dump_folder_path, MLukeTokenizer.vocab_files_names["entity_vocab_file"]), "w") as f:
json.dump(entity_vocab, f)
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path)
# Initialize the embeddings of the special tokens
ent_init_index = tokenizer.convert_tokens_to_ids(["@"])[0]
ent2_init_index = tokenizer.convert_tokens_to_ids(["#"])[0]
word_emb = state_dict["embeddings.word_embeddings.weight"]
ent_emb = word_emb[ent_init_index].unsqueeze(0)
ent2_emb = word_emb[ent2_init_index].unsqueeze(0)
state_dict["embeddings.word_embeddings.weight"] = torch.cat([word_emb, ent_emb, ent2_emb])
# add special tokens for 'entity_predictions.bias'
for bias_name in ["lm_head.decoder.bias", "lm_head.bias"]:
decoder_bias = state_dict[bias_name]
ent_decoder_bias = decoder_bias[ent_init_index].unsqueeze(0)
ent2_decoder_bias = decoder_bias[ent2_init_index].unsqueeze(0)
state_dict[bias_name] = torch.cat([decoder_bias, ent_decoder_bias, ent2_decoder_bias])
# Initialize the query layers of the entity-aware self-attention mechanism
for layer_index in range(config.num_hidden_layers):
for matrix_name in ["query.weight", "query.bias"]:
prefix = f"encoder.layer.{layer_index}.attention.self."
state_dict[prefix + "w2e_" + matrix_name] = state_dict[prefix + matrix_name]
state_dict[prefix + "e2w_" + matrix_name] = state_dict[prefix + matrix_name]
state_dict[prefix + "e2e_" + matrix_name] = state_dict[prefix + matrix_name]
# Initialize the embedding of the [MASK2] entity using that of the [MASK] entity for downstream tasks
entity_emb = state_dict["entity_embeddings.entity_embeddings.weight"]
entity_mask_emb = entity_emb[entity_vocab["[MASK]"]].unsqueeze(0)
state_dict["entity_embeddings.entity_embeddings.weight"] = torch.cat([entity_emb, entity_mask_emb])
# add [MASK2] for 'entity_predictions.bias'
entity_prediction_bias = state_dict["entity_predictions.bias"]
entity_mask_bias = entity_prediction_bias[entity_vocab["[MASK]"]].unsqueeze(0)
state_dict["entity_predictions.bias"] = torch.cat([entity_prediction_bias, entity_mask_bias])
model = LukeForMaskedLM(config=config).eval()
state_dict.pop("entity_predictions.decoder.weight")
state_dict.pop("lm_head.decoder.weight")
state_dict.pop("lm_head.decoder.bias")
state_dict_for_hugging_face = OrderedDict()
for key, value in state_dict.items():
if not (key.startswith("lm_head") or key.startswith("entity_predictions")):
state_dict_for_hugging_face[f"luke.{key}"] = state_dict[key]
else:
state_dict_for_hugging_face[key] = state_dict[key]
missing_keys, unexpected_keys = model.load_state_dict(state_dict_for_hugging_face, strict=False)
if set(unexpected_keys) != {"luke.embeddings.position_ids"}:
raise ValueError(f"Unexpected unexpected_keys: {unexpected_keys}")
if set(missing_keys) != {
"lm_head.decoder.weight",
"lm_head.decoder.bias",
"entity_predictions.decoder.weight",
}:
raise ValueError(f"Unexpected missing_keys: {missing_keys}")
model.tie_weights()
assert (model.luke.embeddings.word_embeddings.weight == model.lm_head.decoder.weight).all()
assert (model.luke.entity_embeddings.entity_embeddings.weight == model.entity_predictions.decoder.weight).all()
# Check outputs
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path, task="entity_classification")
text = "ISO 639-3 uses the code fas for the dialects spoken across Iran and アフガニスタン (Afghanistan)."
span = (0, 9)
encoding = tokenizer(text, entity_spans=[span], return_tensors="pt")
outputs = model(**encoding)
# Verify word hidden states
if model_size == "large":
raise NotImplementedError
else: # base
expected_shape = torch.Size((1, 33, 768))
expected_slice = torch.tensor([[0.0892, 0.0596, -0.2819], [0.0134, 0.1199, 0.0573], [-0.0169, 0.0927, 0.0644]])
if not (outputs.last_hidden_state.shape == expected_shape):
raise ValueError(
f"Outputs.last_hidden_state.shape is {outputs.last_hidden_state.shape}, Expected shape is {expected_shape}"
)
if not torch.allclose(outputs.last_hidden_state[0, :3, :3], expected_slice, atol=1e-4):
raise ValueError
# Verify entity hidden states
if model_size == "large":
raise NotImplementedError
else: # base
expected_shape = torch.Size((1, 1, 768))
expected_slice = torch.tensor([[-0.1482, 0.0609, 0.0322]])
if not (outputs.entity_last_hidden_state.shape == expected_shape):
raise ValueError(
f"Outputs.entity_last_hidden_state.shape is {outputs.entity_last_hidden_state.shape}, Expected shape is"
f" {expected_shape}"
)
if not torch.allclose(outputs.entity_last_hidden_state[0, :3, :3], expected_slice, atol=1e-4):
raise ValueError
# Verify masked word/entity prediction
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path)
text = "Tokyo is the capital of <mask>."
span = (24, 30)
encoding = tokenizer(text, entity_spans=[span], return_tensors="pt")
outputs = model(**encoding)
input_ids = encoding["input_ids"][0].tolist()
mask_position_id = input_ids.index(tokenizer.convert_tokens_to_ids("<mask>"))
predicted_id = outputs.logits[0][mask_position_id].argmax(dim=-1)
assert "Japan" == tokenizer.decode(predicted_id)
predicted_entity_id = outputs.entity_logits[0][0].argmax().item()
multilingual_predicted_entities = [
entity for entity, entity_id in tokenizer.entity_vocab.items() if entity_id == predicted_entity_id
]
assert [e for e in multilingual_predicted_entities if e.startswith("en:")][0] == "en:Japan"
# Finally, save our PyTorch model and tokenizer
print("Saving PyTorch model to {}".format(pytorch_dump_folder_path))
model.save_pretrained(pytorch_dump_folder_path)
def load_original_entity_vocab(entity_vocab_path):
SPECIAL_TOKENS = ["[MASK]", "[PAD]", "[UNK]"]
data = [json.loads(line) for line in open(entity_vocab_path)]
new_mapping = {}
for entry in data:
entity_id = entry["id"]
for entity_name, language in entry["entities"]:
if entity_name in SPECIAL_TOKENS:
new_mapping[entity_name] = entity_id
break
new_entity_name = f"{language}:{entity_name}"
new_mapping[new_entity_name] = entity_id
return new_mapping
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument("--checkpoint_path", type=str, help="Path to a pytorch_model.bin file.")
parser.add_argument(
"--metadata_path", default=None, type=str, help="Path to a metadata.json file, defining the configuration."
)
parser.add_argument(
"--entity_vocab_path",
default=None,
type=str,
help="Path to an entity_vocab.tsv file, containing the entity vocabulary.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to where to dump the output PyTorch model."
)
parser.add_argument(
"--model_size", default="base", type=str, choices=["base", "large"], help="Size of the model to be converted."
)
args = parser.parse_args()
convert_luke_checkpoint(
args.checkpoint_path,
args.metadata_path,
args.entity_vocab_path,
args.pytorch_dump_folder_path,
args.model_size,
)
| 0 |
hf_public_repos/transformers/src/transformers/models | hf_public_repos/transformers/src/transformers/models/mluke/tokenization_mluke.py | # coding=utf-8
# Copyright 2021 Studio Ousia and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License
""" Tokenization classes for mLUKE."""
import itertools
import json
import os
from collections.abc import Mapping
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple, Union
import numpy as np
import sentencepiece as spm
from ...tokenization_utils import PreTrainedTokenizer
from ...tokenization_utils_base import (
ENCODE_KWARGS_DOCSTRING,
AddedToken,
BatchEncoding,
EncodedInput,
PaddingStrategy,
TensorType,
TextInput,
TextInputPair,
TruncationStrategy,
to_py_obj,
)
from ...utils import add_end_docstrings, is_tf_tensor, is_torch_tensor, logging
logger = logging.get_logger(__name__)
EntitySpan = Tuple[int, int]
EntitySpanInput = List[EntitySpan]
Entity = str
EntityInput = List[Entity]
SPIECE_UNDERLINE = "▁"
VOCAB_FILES_NAMES = {"vocab_file": "sentencepiece.bpe.model", "entity_vocab_file": "entity_vocab.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/vocab.json",
},
"merges_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/merges.txt",
},
"entity_vocab_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/entity_vocab.json",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"studio-ousia/mluke-base": 512,
}
ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
return_token_type_ids (`bool`, *optional*):
Whether to return token type IDs. If left to the default, will return the token type IDs according to
the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are token type IDs?](../glossary#token-type-ids)
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are attention masks?](../glossary#attention-mask)
return_overflowing_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to return overflowing token sequences. If a pair of sequences of input ids (or a batch
of pairs) is provided with `truncation_strategy = longest_first` or `True`, an error is raised instead
of returning overflowing tokens.
return_special_tokens_mask (`bool`, *optional*, defaults to `False`):
Whether or not to return special tokens mask information.
return_offsets_mapping (`bool`, *optional*, defaults to `False`):
Whether or not to return `(char_start, char_end)` for each token.
This is only available on fast tokenizers inheriting from [`PreTrainedTokenizerFast`], if using
Python's tokenizer, this method will raise `NotImplementedError`.
return_length (`bool`, *optional*, defaults to `False`):
Whether or not to return the lengths of the encoded inputs.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
**kwargs: passed to the `self.tokenize()` method
Return:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model.
[What are input IDs?](../glossary#input-ids)
- **token_type_ids** -- List of token type ids to be fed to a model (when `return_token_type_ids=True` or
if *"token_type_ids"* is in `self.model_input_names`).
[What are token type IDs?](../glossary#token-type-ids)
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names`).
[What are attention masks?](../glossary#attention-mask)
- **entity_ids** -- List of entity ids to be fed to a model.
[What are input IDs?](../glossary#input-ids)
- **entity_position_ids** -- List of entity positions in the input sequence to be fed to a model.
- **entity_token_type_ids** -- List of entity token type ids to be fed to a model (when
`return_token_type_ids=True` or if *"entity_token_type_ids"* is in `self.model_input_names`).
[What are token type IDs?](../glossary#token-type-ids)
- **entity_attention_mask** -- List of indices specifying which entities should be attended to by the model
(when `return_attention_mask=True` or if *"entity_attention_mask"* is in `self.model_input_names`).
[What are attention masks?](../glossary#attention-mask)
- **entity_start_positions** -- List of the start positions of entities in the word token sequence (when
`task="entity_span_classification"`).
- **entity_end_positions** -- List of the end positions of entities in the word token sequence (when
`task="entity_span_classification"`).
- **overflowing_tokens** -- List of overflowing tokens sequences (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **num_truncated_tokens** -- Number of tokens truncated (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **special_tokens_mask** -- List of 0s and 1s, with 1 specifying added special tokens and 0 specifying
regular sequence tokens (when `add_special_tokens=True` and `return_special_tokens_mask=True`).
- **length** -- The length of the inputs (when `return_length=True`)
"""
class MLukeTokenizer(PreTrainedTokenizer):
"""
Adapted from [`XLMRobertaTokenizer`] and [`LukeTokenizer`]. Based on
[SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
entity_vocab_file (`str`):
Path to the entity vocabulary file.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
task (`str`, *optional*):
Task for which you want to prepare sequences. One of `"entity_classification"`,
`"entity_pair_classification"`, or `"entity_span_classification"`. If you specify this argument, the entity
sequence is automatically created based on the given entity span(s).
max_entity_length (`int`, *optional*, defaults to 32):
The maximum length of `entity_ids`.
max_mention_length (`int`, *optional*, defaults to 30):
The maximum number of tokens inside an entity span.
entity_token_1 (`str`, *optional*, defaults to `<ent>`):
The special token used to represent an entity span in a word token sequence. This token is only used when
`task` is set to `"entity_classification"` or `"entity_pair_classification"`.
entity_token_2 (`str`, *optional*, defaults to `<ent2>`):
The special token used to represent an entity span in a word token sequence. This token is only used when
`task` is set to `"entity_pair_classification"`.
additional_special_tokens (`List[str]`, *optional*, defaults to `["<s>NOTUSED", "</s>NOTUSED"]`):
Additional special tokens used by the tokenizer.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
Attributes:
sp_model (`SentencePieceProcessor`):
The *SentencePiece* processor that is used for every conversion (string, tokens and IDs).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
entity_vocab_file,
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
task=None,
max_entity_length=32,
max_mention_length=30,
entity_token_1="<ent>",
entity_token_2="<ent2>",
entity_unk_token="[UNK]",
entity_pad_token="[PAD]",
entity_mask_token="[MASK]",
entity_mask2_token="[MASK2]",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
# we add 2 special tokens for downstream tasks
# for more information about lstrip and rstrip, see https://github.com/huggingface/transformers/pull/2778
entity_token_1 = (
AddedToken(entity_token_1, lstrip=False, rstrip=False)
if isinstance(entity_token_1, str)
else entity_token_1
)
entity_token_2 = (
AddedToken(entity_token_2, lstrip=False, rstrip=False)
if isinstance(entity_token_2, str)
else entity_token_2
)
additional_special_tokens = kwargs.pop("additional_special_tokens", [])
additional_special_tokens += [entity_token_1, entity_token_2]
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(str(vocab_file))
self.vocab_file = vocab_file
# Original fairseq vocab and spm vocab must be "aligned":
# Vocab | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9
# -------- | ------- | ------- | ------ | ------- | --- | --- | --- | ----- | ----- | ----
# fairseq | '<s>' | '<pad>' | '</s>' | '<unk>' | ',' | '.' | '▁' | 's' | '▁de' | '-'
# spm | '<unk>' | '<s>' | '</s>' | ',' | '.' | '▁' | 's' | '▁de' | '-' | '▁a'
# Mimic fairseq token-to-id alignment for the first 4 token
self.fairseq_tokens_to_ids = {"<s>": 0, "<pad>": 1, "</s>": 2, "<unk>": 3}
# The first "real" token "," has position 4 in the original fairseq vocab and position 3 in the spm vocab
self.fairseq_offset = 1
self.fairseq_tokens_to_ids["<mask>"] = len(self.sp_model) + self.fairseq_offset
self.fairseq_ids_to_tokens = {v: k for k, v in self.fairseq_tokens_to_ids.items()}
with open(entity_vocab_file, encoding="utf-8") as entity_vocab_handle:
self.entity_vocab = json.load(entity_vocab_handle)
for entity_special_token in [entity_unk_token, entity_pad_token, entity_mask_token, entity_mask2_token]:
if entity_special_token not in self.entity_vocab:
raise ValueError(
f"Specified entity special token ``{entity_special_token}`` is not found in entity_vocab. "
f"Probably an incorrect entity vocab file is loaded: {entity_vocab_file}."
)
self.entity_unk_token_id = self.entity_vocab[entity_unk_token]
self.entity_pad_token_id = self.entity_vocab[entity_pad_token]
self.entity_mask_token_id = self.entity_vocab[entity_mask_token]
self.entity_mask2_token_id = self.entity_vocab[entity_mask2_token]
self.task = task
if task is None or task == "entity_span_classification":
self.max_entity_length = max_entity_length
elif task == "entity_classification":
self.max_entity_length = 1
elif task == "entity_pair_classification":
self.max_entity_length = 2
else:
raise ValueError(
f"Task {task} not supported. Select task from ['entity_classification', 'entity_pair_classification',"
" 'entity_span_classification'] only."
)
self.max_mention_length = max_mention_length
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
sp_model_kwargs=self.sp_model_kwargs,
task=task,
max_entity_length=max_entity_length,
max_mention_length=max_mention_length,
entity_token_1=entity_token_1,
entity_token_2=entity_token_2,
entity_unk_token=entity_unk_token,
entity_pad_token=entity_pad_token,
entity_mask_token=entity_mask_token,
entity_mask2_token=entity_mask2_token,
additional_special_tokens=additional_special_tokens,
**kwargs,
)
@property
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.vocab_size
def vocab_size(self):
return len(self.sp_model) + self.fairseq_offset + 1 # Add the <mask> token
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.get_vocab
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer._tokenize
def _tokenize(self, text: str) -> List[str]:
# TODO check if the t5/llama PR also applies here
return self.sp_model.encode(text, out_type=str)
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer._convert_token_to_id
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
if token in self.fairseq_tokens_to_ids:
return self.fairseq_tokens_to_ids[token]
spm_id = self.sp_model.PieceToId(token)
# Need to return unknown token if the SP model returned 0
return spm_id + self.fairseq_offset if spm_id else self.unk_token_id
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
if index in self.fairseq_ids_to_tokens:
return self.fairseq_ids_to_tokens[index]
return self.sp_model.IdToPiece(index - self.fairseq_offset)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (strings for sub-words) in a single string."""
out_string = "".join(tokens).replace(SPIECE_UNDERLINE, " ").strip()
return out_string
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
state["sp_model_proto"] = self.sp_model.serialized_model_proto()
return state
def __setstate__(self, d):
self.__dict__ = d
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.LoadFromSerializedProto(self.sp_model_proto)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.__call__
def __call__(
self,
text: Union[TextInput, List[TextInput]],
text_pair: Optional[Union[TextInput, List[TextInput]]] = None,
entity_spans: Optional[Union[EntitySpanInput, List[EntitySpanInput]]] = None,
entity_spans_pair: Optional[Union[EntitySpanInput, List[EntitySpanInput]]] = None,
entities: Optional[Union[EntityInput, List[EntityInput]]] = None,
entities_pair: Optional[Union[EntityInput, List[EntityInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences, depending on the task you want to prepare them for.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence must be a string. Note that this
tokenizer does not support tokenization based on pretokenized strings.
text_pair (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence must be a string. Note that this
tokenizer does not support tokenization based on pretokenized strings.
entity_spans (`List[Tuple[int, int]]`, `List[List[Tuple[int, int]]]`, *optional*):
The sequence or batch of sequences of entity spans to be encoded. Each sequence consists of tuples each
with two integers denoting character-based start and end positions of entities. If you specify
`"entity_classification"` or `"entity_pair_classification"` as the `task` argument in the constructor,
the length of each sequence must be 1 or 2, respectively. If you specify `entities`, the length of each
sequence must be equal to the length of each sequence of `entities`.
entity_spans_pair (`List[Tuple[int, int]]`, `List[List[Tuple[int, int]]]`, *optional*):
The sequence or batch of sequences of entity spans to be encoded. Each sequence consists of tuples each
with two integers denoting character-based start and end positions of entities. If you specify the
`task` argument in the constructor, this argument is ignored. If you specify `entities_pair`, the
length of each sequence must be equal to the length of each sequence of `entities_pair`.
entities (`List[str]`, `List[List[str]]`, *optional*):
The sequence or batch of sequences of entities to be encoded. Each sequence consists of strings
representing entities, i.e., special entities (e.g., [MASK]) or entity titles of Wikipedia (e.g., Los
Angeles). This argument is ignored if you specify the `task` argument in the constructor. The length of
each sequence must be equal to the length of each sequence of `entity_spans`. If you specify
`entity_spans` without specifying this argument, the entity sequence or the batch of entity sequences
is automatically constructed by filling it with the [MASK] entity.
entities_pair (`List[str]`, `List[List[str]]`, *optional*):
The sequence or batch of sequences of entities to be encoded. Each sequence consists of strings
representing entities, i.e., special entities (e.g., [MASK]) or entity titles of Wikipedia (e.g., Los
Angeles). This argument is ignored if you specify the `task` argument in the constructor. The length of
each sequence must be equal to the length of each sequence of `entity_spans_pair`. If you specify
`entity_spans_pair` without specifying this argument, the entity sequence or the batch of entity
sequences is automatically constructed by filling it with the [MASK] entity.
max_entity_length (`int`, *optional*):
The maximum length of `entity_ids`.
"""
# Input type checking for clearer error
is_valid_single_text = isinstance(text, str)
is_valid_batch_text = isinstance(text, (list, tuple)) and (len(text) == 0 or (isinstance(text[0], str)))
if not (is_valid_single_text or is_valid_batch_text):
raise ValueError("text input must be of type `str` (single example) or `List[str]` (batch).")
is_valid_single_text_pair = isinstance(text_pair, str)
is_valid_batch_text_pair = isinstance(text_pair, (list, tuple)) and (
len(text_pair) == 0 or isinstance(text_pair[0], str)
)
if not (text_pair is None or is_valid_single_text_pair or is_valid_batch_text_pair):
raise ValueError("text_pair input must be of type `str` (single example) or `List[str]` (batch).")
is_batched = bool(isinstance(text, (list, tuple)))
if is_batched:
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
if entities is None:
batch_entities_or_entities_pairs = None
else:
batch_entities_or_entities_pairs = (
list(zip(entities, entities_pair)) if entities_pair is not None else entities
)
if entity_spans is None:
batch_entity_spans_or_entity_spans_pairs = None
else:
batch_entity_spans_or_entity_spans_pairs = (
list(zip(entity_spans, entity_spans_pair)) if entity_spans_pair is not None else entity_spans
)
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
batch_entity_spans_or_entity_spans_pairs=batch_entity_spans_or_entity_spans_pairs,
batch_entities_or_entities_pairs=batch_entities_or_entities_pairs,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
entities=entities,
entities_pair=entities_pair,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._encode_plus
def _encode_plus(
self,
text: Union[TextInput],
text_pair: Optional[Union[TextInput]] = None,
entity_spans: Optional[EntitySpanInput] = None,
entity_spans_pair: Optional[EntitySpanInput] = None,
entities: Optional[EntityInput] = None,
entities_pair: Optional[EntityInput] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
if is_split_into_words:
raise NotImplementedError("is_split_into_words is not supported in this tokenizer.")
(
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
) = self._create_input_sequence(
text=text,
text_pair=text_pair,
entities=entities,
entities_pair=entities_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
**kwargs,
)
# prepare_for_model will create the attention_mask and token_type_ids
return self.prepare_for_model(
first_ids,
pair_ids=second_ids,
entity_ids=first_entity_ids,
pair_entity_ids=second_entity_ids,
entity_token_spans=first_entity_token_spans,
pair_entity_token_spans=second_entity_token_spans,
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._batch_encode_plus
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[List[TextInput], List[TextInputPair]],
batch_entity_spans_or_entity_spans_pairs: Optional[
Union[List[EntitySpanInput], List[Tuple[EntitySpanInput, EntitySpanInput]]]
] = None,
batch_entities_or_entities_pairs: Optional[
Union[List[EntityInput], List[Tuple[EntityInput, EntityInput]]]
] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
if is_split_into_words:
raise NotImplementedError("is_split_into_words is not supported in this tokenizer.")
# input_ids is a list of tuples (one for each example in the batch)
input_ids = []
entity_ids = []
entity_token_spans = []
for index, text_or_text_pair in enumerate(batch_text_or_text_pairs):
if not isinstance(text_or_text_pair, (list, tuple)):
text, text_pair = text_or_text_pair, None
else:
text, text_pair = text_or_text_pair
entities, entities_pair = None, None
if batch_entities_or_entities_pairs is not None:
entities_or_entities_pairs = batch_entities_or_entities_pairs[index]
if entities_or_entities_pairs:
if isinstance(entities_or_entities_pairs[0], str):
entities, entities_pair = entities_or_entities_pairs, None
else:
entities, entities_pair = entities_or_entities_pairs
entity_spans, entity_spans_pair = None, None
if batch_entity_spans_or_entity_spans_pairs is not None:
entity_spans_or_entity_spans_pairs = batch_entity_spans_or_entity_spans_pairs[index]
if len(entity_spans_or_entity_spans_pairs) > 0 and isinstance(
entity_spans_or_entity_spans_pairs[0], list
):
entity_spans, entity_spans_pair = entity_spans_or_entity_spans_pairs
else:
entity_spans, entity_spans_pair = entity_spans_or_entity_spans_pairs, None
(
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
) = self._create_input_sequence(
text=text,
text_pair=text_pair,
entities=entities,
entities_pair=entities_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
**kwargs,
)
input_ids.append((first_ids, second_ids))
entity_ids.append((first_entity_ids, second_entity_ids))
entity_token_spans.append((first_entity_token_spans, second_entity_token_spans))
batch_outputs = self._batch_prepare_for_model(
input_ids,
batch_entity_ids_pairs=entity_ids,
batch_entity_token_spans_pairs=entity_token_spans,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=return_tensors,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._check_entity_input_format
def _check_entity_input_format(self, entities: Optional[EntityInput], entity_spans: Optional[EntitySpanInput]):
if not isinstance(entity_spans, list):
raise ValueError("entity_spans should be given as a list")
elif len(entity_spans) > 0 and not isinstance(entity_spans[0], tuple):
raise ValueError(
"entity_spans should be given as a list of tuples containing the start and end character indices"
)
if entities is not None:
if not isinstance(entities, list):
raise ValueError("If you specify entities, they should be given as a list")
if len(entities) > 0 and not isinstance(entities[0], str):
raise ValueError("If you specify entities, they should be given as a list of entity names")
if len(entities) != len(entity_spans):
raise ValueError("If you specify entities, entities and entity_spans must be the same length")
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._create_input_sequence
def _create_input_sequence(
self,
text: Union[TextInput],
text_pair: Optional[Union[TextInput]] = None,
entities: Optional[EntityInput] = None,
entities_pair: Optional[EntityInput] = None,
entity_spans: Optional[EntitySpanInput] = None,
entity_spans_pair: Optional[EntitySpanInput] = None,
**kwargs,
) -> Tuple[list, list, list, list, list, list]:
def get_input_ids(text):
tokens = self.tokenize(text, **kwargs)
return self.convert_tokens_to_ids(tokens)
def get_input_ids_and_entity_token_spans(text, entity_spans):
if entity_spans is None:
return get_input_ids(text), None
cur = 0
input_ids = []
entity_token_spans = [None] * len(entity_spans)
split_char_positions = sorted(frozenset(itertools.chain(*entity_spans)))
char_pos2token_pos = {}
for split_char_position in split_char_positions:
orig_split_char_position = split_char_position
if (
split_char_position > 0 and text[split_char_position - 1] == " "
): # whitespace should be prepended to the following token
split_char_position -= 1
if cur != split_char_position:
input_ids += get_input_ids(text[cur:split_char_position])
cur = split_char_position
char_pos2token_pos[orig_split_char_position] = len(input_ids)
input_ids += get_input_ids(text[cur:])
entity_token_spans = [
(char_pos2token_pos[char_start], char_pos2token_pos[char_end]) for char_start, char_end in entity_spans
]
return input_ids, entity_token_spans
first_ids, second_ids = None, None
first_entity_ids, second_entity_ids = None, None
first_entity_token_spans, second_entity_token_spans = None, None
if self.task is None:
if entity_spans is None:
first_ids = get_input_ids(text)
else:
self._check_entity_input_format(entities, entity_spans)
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
if entities is None:
first_entity_ids = [self.entity_mask_token_id] * len(entity_spans)
else:
first_entity_ids = [self.entity_vocab.get(entity, self.entity_unk_token_id) for entity in entities]
if text_pair is not None:
if entity_spans_pair is None:
second_ids = get_input_ids(text_pair)
else:
self._check_entity_input_format(entities_pair, entity_spans_pair)
second_ids, second_entity_token_spans = get_input_ids_and_entity_token_spans(
text_pair, entity_spans_pair
)
if entities_pair is None:
second_entity_ids = [self.entity_mask_token_id] * len(entity_spans_pair)
else:
second_entity_ids = [
self.entity_vocab.get(entity, self.entity_unk_token_id) for entity in entities_pair
]
elif self.task == "entity_classification":
if not (isinstance(entity_spans, list) and len(entity_spans) == 1 and isinstance(entity_spans[0], tuple)):
raise ValueError(
"Entity spans should be a list containing a single tuple "
"containing the start and end character indices of an entity"
)
first_entity_ids = [self.entity_mask_token_id]
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
# add special tokens to input ids
entity_token_start, entity_token_end = first_entity_token_spans[0]
first_ids = (
first_ids[:entity_token_end] + [self.additional_special_tokens_ids[0]] + first_ids[entity_token_end:]
)
first_ids = (
first_ids[:entity_token_start]
+ [self.additional_special_tokens_ids[0]]
+ first_ids[entity_token_start:]
)
first_entity_token_spans = [(entity_token_start, entity_token_end + 2)]
elif self.task == "entity_pair_classification":
if not (
isinstance(entity_spans, list)
and len(entity_spans) == 2
and isinstance(entity_spans[0], tuple)
and isinstance(entity_spans[1], tuple)
):
raise ValueError(
"Entity spans should be provided as a list of two tuples, "
"each tuple containing the start and end character indices of an entity"
)
head_span, tail_span = entity_spans
first_entity_ids = [self.entity_mask_token_id, self.entity_mask2_token_id]
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
head_token_span, tail_token_span = first_entity_token_spans
token_span_with_special_token_ids = [
(head_token_span, self.additional_special_tokens_ids[0]),
(tail_token_span, self.additional_special_tokens_ids[1]),
]
if head_token_span[0] < tail_token_span[0]:
first_entity_token_spans[0] = (head_token_span[0], head_token_span[1] + 2)
first_entity_token_spans[1] = (tail_token_span[0] + 2, tail_token_span[1] + 4)
token_span_with_special_token_ids = reversed(token_span_with_special_token_ids)
else:
first_entity_token_spans[0] = (head_token_span[0] + 2, head_token_span[1] + 4)
first_entity_token_spans[1] = (tail_token_span[0], tail_token_span[1] + 2)
for (entity_token_start, entity_token_end), special_token_id in token_span_with_special_token_ids:
first_ids = first_ids[:entity_token_end] + [special_token_id] + first_ids[entity_token_end:]
first_ids = first_ids[:entity_token_start] + [special_token_id] + first_ids[entity_token_start:]
elif self.task == "entity_span_classification":
if not (isinstance(entity_spans, list) and len(entity_spans) > 0 and isinstance(entity_spans[0], tuple)):
raise ValueError(
"Entity spans should be provided as a list of tuples, "
"each tuple containing the start and end character indices of an entity"
)
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
first_entity_ids = [self.entity_mask_token_id] * len(entity_spans)
else:
raise ValueError(f"Task {self.task} not supported")
return (
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._batch_prepare_for_model
def _batch_prepare_for_model(
self,
batch_ids_pairs: List[Tuple[List[int], None]],
batch_entity_ids_pairs: List[Tuple[Optional[List[int]], Optional[List[int]]]],
batch_entity_token_spans_pairs: List[Tuple[Optional[List[Tuple[int, int]]], Optional[List[Tuple[int, int]]]]],
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
"""
Prepares a sequence of input id, or a pair of sequences of inputs ids so that it can be used by the model. It
adds special tokens, truncates sequences if overflowing while taking into account the special tokens and
manages a moving window (with user defined stride) for overflowing tokens
Args:
batch_ids_pairs: list of tokenized input ids or input ids pairs
batch_entity_ids_pairs: list of entity ids or entity ids pairs
batch_entity_token_spans_pairs: list of entity spans or entity spans pairs
max_entity_length: The maximum length of the entity sequence.
"""
batch_outputs = {}
for input_ids, entity_ids, entity_token_span_pairs in zip(
batch_ids_pairs, batch_entity_ids_pairs, batch_entity_token_spans_pairs
):
first_ids, second_ids = input_ids
first_entity_ids, second_entity_ids = entity_ids
first_entity_token_spans, second_entity_token_spans = entity_token_span_pairs
outputs = self.prepare_for_model(
first_ids,
second_ids,
entity_ids=first_entity_ids,
pair_entity_ids=second_entity_ids,
entity_token_spans=first_entity_token_spans,
pair_entity_token_spans=second_entity_token_spans,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterward
truncation=truncation_strategy.value,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterward
return_attention_mask=False, # we pad in batch afterward
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.prepare_for_model
def prepare_for_model(
self,
ids: List[int],
pair_ids: Optional[List[int]] = None,
entity_ids: Optional[List[int]] = None,
pair_entity_ids: Optional[List[int]] = None,
entity_token_spans: Optional[List[Tuple[int, int]]] = None,
pair_entity_token_spans: Optional[List[Tuple[int, int]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
"""
Prepares a sequence of input id, entity id and entity span, or a pair of sequences of inputs ids, entity ids,
entity spans so that it can be used by the model. It adds special tokens, truncates sequences if overflowing
while taking into account the special tokens and manages a moving window (with user defined stride) for
overflowing tokens. Please Note, for *pair_ids* different than `None` and *truncation_strategy = longest_first*
or `True`, it is not possible to return overflowing tokens. Such a combination of arguments will raise an
error.
Args:
ids (`List[int]`):
Tokenized input ids of the first sequence.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence.
entity_ids (`List[int]`, *optional*):
Entity ids of the first sequence.
pair_entity_ids (`List[int]`, *optional*):
Entity ids of the second sequence.
entity_token_spans (`List[Tuple[int, int]]`, *optional*):
Entity spans of the first sequence.
pair_entity_token_spans (`List[Tuple[int, int]]`, *optional*):
Entity spans of the second sequence.
max_entity_length (`int`, *optional*):
The maximum length of the entity sequence.
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
# Compute lengths
pair = bool(pair_ids is not None)
len_ids = len(ids)
len_pair_ids = len(pair_ids) if pair else 0
if return_token_type_ids and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (
return_overflowing_tokens
and truncation_strategy == TruncationStrategy.LONGEST_FIRST
and pair_ids is not None
):
raise ValueError(
"Not possible to return overflowing tokens for pair of sequences with the "
"`longest_first`. Please select another truncation strategy than `longest_first`, "
"for instance `only_second` or `only_first`."
)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
encoded_inputs = {}
# Compute the total size of the returned word encodings
total_len = len_ids + len_pair_ids + (self.num_special_tokens_to_add(pair=pair) if add_special_tokens else 0)
# Truncation: Handle max sequence length and max_entity_length
overflowing_tokens = []
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and max_length and total_len > max_length:
# truncate words up to max_length
ids, pair_ids, overflowing_tokens = self.truncate_sequences(
ids,
pair_ids=pair_ids,
num_tokens_to_remove=total_len - max_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
if return_overflowing_tokens:
encoded_inputs["overflowing_tokens"] = overflowing_tokens
encoded_inputs["num_truncated_tokens"] = total_len - max_length
# Add special tokens
if add_special_tokens:
sequence = self.build_inputs_with_special_tokens(ids, pair_ids)
token_type_ids = self.create_token_type_ids_from_sequences(ids, pair_ids)
entity_token_offset = 1 # 1 * <s> token
pair_entity_token_offset = len(ids) + 3 # 1 * <s> token & 2 * <sep> tokens
else:
sequence = ids + pair_ids if pair else ids
token_type_ids = [0] * len(ids) + ([0] * len(pair_ids) if pair else [])
entity_token_offset = 0
pair_entity_token_offset = len(ids)
# Build output dictionary
encoded_inputs["input_ids"] = sequence
if return_token_type_ids:
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(ids, pair_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(sequence)
# Set max entity length
if not max_entity_length:
max_entity_length = self.max_entity_length
if entity_ids is not None:
total_entity_len = 0
num_invalid_entities = 0
valid_entity_ids = [ent_id for ent_id, span in zip(entity_ids, entity_token_spans) if span[1] <= len(ids)]
valid_entity_token_spans = [span for span in entity_token_spans if span[1] <= len(ids)]
total_entity_len += len(valid_entity_ids)
num_invalid_entities += len(entity_ids) - len(valid_entity_ids)
valid_pair_entity_ids, valid_pair_entity_token_spans = None, None
if pair_entity_ids is not None:
valid_pair_entity_ids = [
ent_id
for ent_id, span in zip(pair_entity_ids, pair_entity_token_spans)
if span[1] <= len(pair_ids)
]
valid_pair_entity_token_spans = [span for span in pair_entity_token_spans if span[1] <= len(pair_ids)]
total_entity_len += len(valid_pair_entity_ids)
num_invalid_entities += len(pair_entity_ids) - len(valid_pair_entity_ids)
if num_invalid_entities != 0:
logger.warning(
f"{num_invalid_entities} entities are ignored because their entity spans are invalid due to the"
" truncation of input tokens"
)
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and total_entity_len > max_entity_length:
# truncate entities up to max_entity_length
valid_entity_ids, valid_pair_entity_ids, overflowing_entities = self.truncate_sequences(
valid_entity_ids,
pair_ids=valid_pair_entity_ids,
num_tokens_to_remove=total_entity_len - max_entity_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
valid_entity_token_spans = valid_entity_token_spans[: len(valid_entity_ids)]
if valid_pair_entity_token_spans is not None:
valid_pair_entity_token_spans = valid_pair_entity_token_spans[: len(valid_pair_entity_ids)]
if return_overflowing_tokens:
encoded_inputs["overflowing_entities"] = overflowing_entities
encoded_inputs["num_truncated_entities"] = total_entity_len - max_entity_length
final_entity_ids = valid_entity_ids + valid_pair_entity_ids if valid_pair_entity_ids else valid_entity_ids
encoded_inputs["entity_ids"] = list(final_entity_ids)
entity_position_ids = []
entity_start_positions = []
entity_end_positions = []
for token_spans, offset in (
(valid_entity_token_spans, entity_token_offset),
(valid_pair_entity_token_spans, pair_entity_token_offset),
):
if token_spans is not None:
for start, end in token_spans:
start += offset
end += offset
position_ids = list(range(start, end))[: self.max_mention_length]
position_ids += [-1] * (self.max_mention_length - end + start)
entity_position_ids.append(position_ids)
entity_start_positions.append(start)
entity_end_positions.append(end - 1)
encoded_inputs["entity_position_ids"] = entity_position_ids
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = entity_start_positions
encoded_inputs["entity_end_positions"] = entity_end_positions
if return_token_type_ids:
encoded_inputs["entity_token_type_ids"] = [0] * len(encoded_inputs["entity_ids"])
# Check lengths
self._eventual_warn_about_too_long_sequence(encoded_inputs["input_ids"], max_length, verbose)
# Padding
if padding_strategy != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding=padding_strategy.value,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.pad
def pad(
self,
encoded_inputs: Union[
BatchEncoding,
List[BatchEncoding],
Dict[str, EncodedInput],
Dict[str, List[EncodedInput]],
List[Dict[str, EncodedInput]],
],
padding: Union[bool, str, PaddingStrategy] = True,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
verbose: bool = True,
) -> BatchEncoding:
"""
Pad a single encoded input or a batch of encoded inputs up to predefined length or to the max sequence length
in the batch. Padding side (left/right) padding token ids are defined at the tokenizer level (with
`self.padding_side`, `self.pad_token_id` and `self.pad_token_type_id`) .. note:: If the `encoded_inputs` passed
are dictionary of numpy arrays, PyTorch tensors or TensorFlow tensors, the result will use the same type unless
you provide a different tensor type with `return_tensors`. In the case of PyTorch tensors, you will lose the
specific device of your tensors however.
Args:
encoded_inputs ([`BatchEncoding`], list of [`BatchEncoding`], `Dict[str, List[int]]`, `Dict[str, List[List[int]]` or `List[Dict[str, List[int]]]`):
Tokenized inputs. Can represent one input ([`BatchEncoding`] or `Dict[str, List[int]]`) or a batch of
tokenized inputs (list of [`BatchEncoding`], *Dict[str, List[List[int]]]* or *List[Dict[str,
List[int]]]*) so you can use this method during preprocessing as well as in a PyTorch Dataloader
collate function. Instead of `List[int]` you can have tensors (numpy arrays, PyTorch tensors or
TensorFlow tensors), see the note above for the return type.
padding (`bool`, `str` or [`~utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding
index) among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
max_entity_length (`int`, *optional*):
The maximum length of the entity sequence.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability `>= 7.5` (Volta).
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute. [What are attention
masks?](../glossary#attention-mask)
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
"""
# If we have a list of dicts, let's convert it in a dict of lists
# We do this to allow using this method as a collate_fn function in PyTorch Dataloader
if isinstance(encoded_inputs, (list, tuple)) and isinstance(encoded_inputs[0], Mapping):
encoded_inputs = {key: [example[key] for example in encoded_inputs] for key in encoded_inputs[0].keys()}
# The model's main input name, usually `input_ids`, has be passed for padding
if self.model_input_names[0] not in encoded_inputs:
raise ValueError(
"You should supply an encoding or a list of encodings to this method "
f"that includes {self.model_input_names[0]}, but you provided {list(encoded_inputs.keys())}"
)
required_input = encoded_inputs[self.model_input_names[0]]
if not required_input:
if return_attention_mask:
encoded_inputs["attention_mask"] = []
return encoded_inputs
# If we have PyTorch/TF/NumPy tensors/arrays as inputs, we cast them as python objects
# and rebuild them afterwards if no return_tensors is specified
# Note that we lose the specific device the tensor may be on for PyTorch
first_element = required_input[0]
if isinstance(first_element, (list, tuple)):
# first_element might be an empty list/tuple in some edge cases so we grab the first non empty element.
index = 0
while len(required_input[index]) == 0:
index += 1
if index < len(required_input):
first_element = required_input[index][0]
# At this state, if `first_element` is still a list/tuple, it's an empty one so there is nothing to do.
if not isinstance(first_element, (int, list, tuple)):
if is_tf_tensor(first_element):
return_tensors = "tf" if return_tensors is None else return_tensors
elif is_torch_tensor(first_element):
return_tensors = "pt" if return_tensors is None else return_tensors
elif isinstance(first_element, np.ndarray):
return_tensors = "np" if return_tensors is None else return_tensors
else:
raise ValueError(
f"type of {first_element} unknown: {type(first_element)}. "
"Should be one of a python, numpy, pytorch or tensorflow object."
)
for key, value in encoded_inputs.items():
encoded_inputs[key] = to_py_obj(value)
# Convert padding_strategy in PaddingStrategy
padding_strategy, _, max_length, _ = self._get_padding_truncation_strategies(
padding=padding, max_length=max_length, verbose=verbose
)
if max_entity_length is None:
max_entity_length = self.max_entity_length
required_input = encoded_inputs[self.model_input_names[0]]
if required_input and not isinstance(required_input[0], (list, tuple)):
encoded_inputs = self._pad(
encoded_inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
return BatchEncoding(encoded_inputs, tensor_type=return_tensors)
batch_size = len(required_input)
if any(len(v) != batch_size for v in encoded_inputs.values()):
raise ValueError("Some items in the output dictionary have a different batch size than others.")
if padding_strategy == PaddingStrategy.LONGEST:
max_length = max(len(inputs) for inputs in required_input)
max_entity_length = (
max(len(inputs) for inputs in encoded_inputs["entity_ids"]) if "entity_ids" in encoded_inputs else 0
)
padding_strategy = PaddingStrategy.MAX_LENGTH
batch_outputs = {}
for i in range(batch_size):
inputs = {k: v[i] for k, v in encoded_inputs.items()}
outputs = self._pad(
inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
return BatchEncoding(batch_outputs, tensor_type=return_tensors)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._pad
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
Args:
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
max_entity_length: The maximum length of the entity sequence.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
entities_provided = bool("entity_ids" in encoded_inputs)
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(encoded_inputs["input_ids"])
if entities_provided:
max_entity_length = len(encoded_inputs["entity_ids"])
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
if (
entities_provided
and max_entity_length is not None
and pad_to_multiple_of is not None
and (max_entity_length % pad_to_multiple_of != 0)
):
max_entity_length = ((max_entity_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and (
len(encoded_inputs["input_ids"]) != max_length
or (entities_provided and len(encoded_inputs["entity_ids"]) != max_entity_length)
)
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(encoded_inputs["input_ids"])
if entities_provided and return_attention_mask and "entity_attention_mask" not in encoded_inputs:
encoded_inputs["entity_attention_mask"] = [1] * len(encoded_inputs["entity_ids"])
if needs_to_be_padded:
difference = max_length - len(encoded_inputs["input_ids"])
if entities_provided:
entity_difference = max_entity_length - len(encoded_inputs["entity_ids"])
if self.padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if entities_provided:
encoded_inputs["entity_attention_mask"] = (
encoded_inputs["entity_attention_mask"] + [0] * entity_difference
)
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = encoded_inputs["token_type_ids"] + [0] * difference
if entities_provided:
encoded_inputs["entity_token_type_ids"] = (
encoded_inputs["entity_token_type_ids"] + [0] * entity_difference
)
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs["input_ids"] = encoded_inputs["input_ids"] + [self.pad_token_id] * difference
if entities_provided:
encoded_inputs["entity_ids"] = (
encoded_inputs["entity_ids"] + [self.entity_pad_token_id] * entity_difference
)
encoded_inputs["entity_position_ids"] = (
encoded_inputs["entity_position_ids"] + [[-1] * self.max_mention_length] * entity_difference
)
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = (
encoded_inputs["entity_start_positions"] + [0] * entity_difference
)
encoded_inputs["entity_end_positions"] = (
encoded_inputs["entity_end_positions"] + [0] * entity_difference
)
elif self.padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if entities_provided:
encoded_inputs["entity_attention_mask"] = [0] * entity_difference + encoded_inputs[
"entity_attention_mask"
]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [0] * difference + encoded_inputs["token_type_ids"]
if entities_provided:
encoded_inputs["entity_token_type_ids"] = [0] * entity_difference + encoded_inputs[
"entity_token_type_ids"
]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs["input_ids"] = [self.pad_token_id] * difference + encoded_inputs["input_ids"]
if entities_provided:
encoded_inputs["entity_ids"] = [self.entity_pad_token_id] * entity_difference + encoded_inputs[
"entity_ids"
]
encoded_inputs["entity_position_ids"] = [
[-1] * self.max_mention_length
] * entity_difference + encoded_inputs["entity_position_ids"]
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = [0] * entity_difference + encoded_inputs[
"entity_start_positions"
]
encoded_inputs["entity_end_positions"] = [0] * entity_difference + encoded_inputs[
"entity_end_positions"
]
else:
raise ValueError("Invalid padding strategy:" + str(self.padding_side))
return encoded_inputs
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str, str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
entity_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["entity_vocab_file"]
)
with open(entity_vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.entity_vocab, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
return out_vocab_file, entity_vocab_file
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.build_inputs_with_special_tokens
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An XLM-RoBERTa sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + sep + token_ids_1 + sep
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.get_special_tokens_mask
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.create_token_type_ids_from_sequences
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. XLM-RoBERTa does
not make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + sep + token_ids_1 + sep) * [0]
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