Rename to VibeProteinBench
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README.md
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language:
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- en
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license: cc-by-4.0
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pretty_name:
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configs:
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- config_name: recognition
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data_files:
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path: generation/test-00000-of-00001.parquet
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---
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#
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## Configurations
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## Responsible AI (RAI) Metadata
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### Data limitations / known limitations
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### Bias and underrepresented populations
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The benchmark is biased toward proteins, structures, annotations, and molecular targets available in public biological databases such as UniProt/Swiss-Prot, RCSB PDB, Gene Ontology, InterPro, ECOD, BRENDA, OGTFinder, PubChem, and related resources. Under-characterized protein families, organisms, or structures, may be underrepresented.
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language:
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- en
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license: cc-by-4.0
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pretty_name: VibeProteinBench
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configs:
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- config_name: recognition
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data_files:
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path: generation/test-00000-of-00001.parquet
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# VibeProteinBench
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VibeProteinBench is a benchmark for evaluating language-interfaced protein design models across three tasks: protein recognition, rationale-guided engineering, and functional protein generation.
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## Configurations
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## Responsible AI (RAI) Metadata
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### Data limitations / known limitations
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VibeProteinBench relies primarily on in silico validation metrics such as predicted structure confidence, energy changes, docking scores, GO prediction, and interface-quality measures, rather than experimental wet-lab validation. Therefore, benchmark success may not fully guarantee real-world biological function or experimental viability.
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### Bias and underrepresented populations
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The benchmark is biased toward proteins, structures, annotations, and molecular targets available in public biological databases such as UniProt/Swiss-Prot, RCSB PDB, Gene Ontology, InterPro, ECOD, BRENDA, OGTFinder, PubChem, and related resources. Under-characterized protein families, organisms, or structures, may be underrepresented.
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