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Rename to VibeProteinBench

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  1. README.md +4 -4
README.md CHANGED
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  language:
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  - en
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  license: cc-by-4.0
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- pretty_name: VibePDBench
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  configs:
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  - config_name: recognition
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  data_files:
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  path: generation/test-00000-of-00001.parquet
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  ---
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- # VibePDBench
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- VibePDBench is a benchmark for evaluating language-interfaced protein design models across three tasks: protein recognition, rationale-guided engineering, and functional protein generation.
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  ## Configurations
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  ## Responsible AI (RAI) Metadata
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  ### Data limitations / known limitations
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- VibePDBench relies primarily on in silico validation metrics such as predicted structure confidence, energy changes, docking scores, GO prediction, and interface-quality measures, rather than experimental wet-lab validation. Therefore, benchmark success may not fully guarantee real-world biological function or experimental viability.
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  ### Bias and underrepresented populations
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  The benchmark is biased toward proteins, structures, annotations, and molecular targets available in public biological databases such as UniProt/Swiss-Prot, RCSB PDB, Gene Ontology, InterPro, ECOD, BRENDA, OGTFinder, PubChem, and related resources. Under-characterized protein families, organisms, or structures, may be underrepresented.
 
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  language:
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  - en
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  license: cc-by-4.0
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+ pretty_name: VibeProteinBench
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  configs:
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  - config_name: recognition
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  data_files:
 
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  path: generation/test-00000-of-00001.parquet
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  ---
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+ # VibeProteinBench
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+ VibeProteinBench is a benchmark for evaluating language-interfaced protein design models across three tasks: protein recognition, rationale-guided engineering, and functional protein generation.
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  ## Configurations
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  ## Responsible AI (RAI) Metadata
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  ### Data limitations / known limitations
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+ VibeProteinBench relies primarily on in silico validation metrics such as predicted structure confidence, energy changes, docking scores, GO prediction, and interface-quality measures, rather than experimental wet-lab validation. Therefore, benchmark success may not fully guarantee real-world biological function or experimental viability.
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  ### Bias and underrepresented populations
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  The benchmark is biased toward proteins, structures, annotations, and molecular targets available in public biological databases such as UniProt/Swiss-Prot, RCSB PDB, Gene Ontology, InterPro, ECOD, BRENDA, OGTFinder, PubChem, and related resources. Under-characterized protein families, organisms, or structures, may be underrepresented.