adding examples in new format for all metaphlan and humann output files
Browse files- genefamilies_cpm_gene_family_species.parquet +3 -0
- genefamilies_cpm_stratified_gene_family_species.parquet +3 -0
- genefamilies_cpm_stratified_uuid.parquet +3 -0
- genefamilies_cpm_unstratified_gene_family.parquet +3 -0
- genefamilies_cpm_unstratified_uuid.parquet +3 -0
- genefamilies_cpm_uuid.parquet +3 -0
- genefamilies_gene_family_species.parquet +3 -0
- genefamilies_relab_gene_family_species.parquet +3 -0
- genefamilies_relab_stratified_gene_family_species.parquet +3 -0
- genefamilies_relab_stratified_uuid.parquet +3 -0
- genefamilies_relab_unstratified_gene_family.parquet +3 -0
- genefamilies_relab_unstratified_uuid.parquet +3 -0
- genefamilies_relab_uuid.parquet +3 -0
- genefamilies_stratified_gene_family_species.parquet +3 -0
- genefamilies_stratified_uuid.parquet +3 -0
- genefamilies_unstratified_gene_family.parquet +3 -0
- genefamilies_unstratified_uuid.parquet +3 -0
- genefamilies_uuid.parquet +3 -0
- marker_abundance_uniref.parquet +3 -0
- marker_abundance_uuid.parquet +3 -0
- marker_presence_uniref.parquet +3 -0
- marker_presence_uuid.parquet +3 -0
- pathabundance_cpm_pathway_species.parquet +3 -0
- pathabundance_cpm_stratified_pathway_species.parquet +3 -0
- pathabundance_cpm_stratified_uuid.parquet +3 -0
- pathabundance_cpm_unstratified_pathway.parquet +3 -0
- pathabundance_cpm_unstratified_uuid.parquet +3 -0
- pathabundance_cpm_uuid.parquet +3 -0
- pathabundance_pathway_species.parquet +3 -0
- pathabundance_relab_pathway_species.parquet +3 -0
- pathabundance_relab_stratified_pathway_species.parquet +3 -0
- pathabundance_relab_stratified_uuid.parquet +3 -0
- pathabundance_relab_unstratified_pathway.parquet +3 -0
- pathabundance_relab_unstratified_uuid.parquet +3 -0
- pathabundance_relab_uuid.parquet +3 -0
- pathabundance_stratified_pathway_species.parquet +3 -0
- pathabundance_stratified_uuid.parquet +3 -0
- pathabundance_unstratified_pathway.parquet +3 -0
- pathabundance_unstratified_uuid.parquet +3 -0
- pathabundance_uuid.parquet +3 -0
- pathcoverage_pathway_species.parquet +3 -0
- pathcoverage_stratified_pathway_species.parquet +3 -0
- pathcoverage_stratified_uuid.parquet +3 -0
- pathcoverage_unstratified_pathway.parquet +3 -0
- pathcoverage_unstratified_uuid.parquet +3 -0
- pathcoverage_uuid.parquet +3 -0
- relative_abundance_clade_name_species.parquet +3 -0
- relative_abundance_uuid.parquet +3 -0
- viral_clusters_genome_name.parquet +3 -0
- viral_clusters_uuid.parquet +3 -0
genefamilies_cpm_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:727eb24542343a3e547fef94e74305c2e93e671bdd3bd024aa102180a3b19dba
|
| 3 |
+
size 81078820
|
genefamilies_cpm_stratified_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d87c740dec73d2b941c105203f8e8274ddda0e311fdba26edf6206c7e4687fbc
|
| 3 |
+
size 51502085
|
genefamilies_cpm_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:25ce942294efc2d0367c41963f6f4c08b5deb0e1e468044138eeacfc2207d019
|
| 3 |
+
size 60449480
|
genefamilies_cpm_unstratified_gene_family.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8c8c806787f59e780776999f00d2b681508e38e17f15597edc199238446156ab
|
| 3 |
+
size 20295169
|
genefamilies_cpm_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:bce37d0a1d55465c685ea0561ab10804a4d71d5b061e2e64cd762d807ed30650
|
| 3 |
+
size 25474808
|
genefamilies_cpm_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:82f3f4203b7a71db9f2c772b1ebf09021c56626927f152ccbcca5354acabbab5
|
| 3 |
+
size 79787519
|
genefamilies_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0ea7fbd62bd7afffa22b56cba1147517b3a807e7450b62e70583f44b0fa0cc8d
|
| 3 |
+
size 85808172
|
genefamilies_relab_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5fb3906de7a32cdd14f5e105aa70a87e5c7143caee44440951f16367da6f04e8
|
| 3 |
+
size 84902981
|
genefamilies_relab_stratified_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fe61198cafcf8a5afbc44cbd12a01fafa30d123b4b281344c6022207df868c2f
|
| 3 |
+
size 55062393
|
genefamilies_relab_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c7083da9f10f6ec8dc8c097c8a7b2064db6d4f81c3465738a9a714e6ee468f68
|
| 3 |
+
size 63854722
|
genefamilies_relab_unstratified_gene_family.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1283c1d4080da1c2654e337705e4162050ef7cbccd9bc3e2942802bc691f7a13
|
| 3 |
+
size 23262607
|
genefamilies_relab_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:afccce05ef65bee3e855ae693a770df5a059c131f12b253ca08cfeafc40ba10a
|
| 3 |
+
size 28759227
|
genefamilies_relab_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3bc4ca5df9060af1ff6ee7d0da27a64c60b01af4b9270c8b6ae0c4560b2a3956
|
| 3 |
+
size 81764773
|
genefamilies_stratified_gene_family_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:208de4987592854e56f88a7049f42d1075f945e2d91ab97830eda048485d02d2
|
| 3 |
+
size 55448666
|
genefamilies_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:99166a65f7f11915e4e80fb1afe134e47650fe630d612fbbf88bc0e370791860
|
| 3 |
+
size 65523163
|
genefamilies_unstratified_gene_family.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:060e49a626657e82ae4c96d245b0c452d3c0d1c6da04c9d8a6ba0e4e8aeae00f
|
| 3 |
+
size 23102403
|
genefamilies_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ad3a42b9675e303ec7b23d512f8de26e90c9ac82915c341dcdac7fe5e84126a0
|
| 3 |
+
size 30616360
|
genefamilies_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:93920b9622c374a80157357fe6c2df29e78210702e6bdde58f84b3b0aa3e5cae
|
| 3 |
+
size 83121681
|
marker_abundance_uniref.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:eda2a6cfd25fc931654e3ec929f8553533688f865660cfc94096b2c4d29cd62f
|
| 3 |
+
size 2053490
|
marker_abundance_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1cdf33df0700dd0bda50ebca6b164044b054c1bf605ef0fa1d6979ab491054e3
|
| 3 |
+
size 2763754
|
marker_presence_uniref.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4df1dfb9999559ef8aa1e881897d5c4554a1e317653ba7ef8ef79456468f8f77
|
| 3 |
+
size 1172380
|
marker_presence_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ac07202eb12a974260ade42bddca135f0e4d42540f64557e980c5753fa3dfa85
|
| 3 |
+
size 2023662
|
pathabundance_cpm_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:47f0eb25e51f24c7853466ed896490b94a1b738b310b5d5ce72a87ca7e0c83bf
|
| 3 |
+
size 330042
|
pathabundance_cpm_stratified_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5d1e49745b3fa7144cbac5d53364d995ddcb21d8ef49e8012fbedfd4ac1251ba
|
| 3 |
+
size 296729
|
pathabundance_cpm_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:82d87498cad6d3ff0dec61090a86d78773d2959b8cd2317e7fec842f57ba3591
|
| 3 |
+
size 357240
|
pathabundance_cpm_unstratified_pathway.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:609b3646ed48433cf23e0571a5bdf35c5a000acdc1e39d7544d84b484f673bec
|
| 3 |
+
size 38421
|
pathabundance_cpm_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ce8bd90e011c547f658698e0915d3408435b39305795bde79e2f5d75ed5afc1a
|
| 3 |
+
size 38939
|
pathabundance_cpm_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6d51f89e680dfeb455521e9264815b26901d42c3360d807a70574fe129e23e08
|
| 3 |
+
size 393038
|
pathabundance_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2c5a30b1b31dae8fb2cf5fa9f04ca76e19aff583870b356b4263932320cfe367
|
| 3 |
+
size 375141
|
pathabundance_relab_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8a4d4adcc89d495d5af33cdd1115ba3e87ba17b0abcbc4d798cd951faa2fcf91
|
| 3 |
+
size 375178
|
pathabundance_relab_stratified_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c506c562e4b71924aa893eba7f3322cababf4273f69fcc13fa6e3090b3373f00
|
| 3 |
+
size 332785
|
pathabundance_relab_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4ec277a5335258a990fe5d637ae03db2d1d79053cfcb0136fe300d4d1ff7631f
|
| 3 |
+
size 395427
|
pathabundance_relab_unstratified_pathway.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5061fba9ff34d92f3d481d2524898419cadc3d4b0bcb641a01ef68b5279ee435
|
| 3 |
+
size 45086
|
pathabundance_relab_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1761a43fa241a23fda03bd32f1036efc5e46a89ae37f5ba0ba9d82e6000ee38f
|
| 3 |
+
size 45670
|
pathabundance_relab_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:39ee1d2736cf77826fe6c50187a4be71b151b3af3939f98eded5abe45b0e4b5c
|
| 3 |
+
size 440287
|
pathabundance_stratified_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:faad23df7b968abd83945b076cab00a44f61dfb95118c2409032996da399dbb1
|
| 3 |
+
size 332821
|
pathabundance_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:00b04128724b6b51626a51e9e20ca02bfaec8d249a8047208f123deee038ac98
|
| 3 |
+
size 402762
|
pathabundance_unstratified_pathway.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2fb859aa7a60f809ff93fc6fba5e303d202450f5dab613814ed0d16b72055972
|
| 3 |
+
size 44832
|
pathabundance_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6ad2429d20c9957d58d92f4176fd2301db88044da201da04fa61065bedc425f3
|
| 3 |
+
size 45414
|
pathabundance_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4a86309c4755c377d0f0c2e5436bf68113a02ee07ed187d991696999f59730cb
|
| 3 |
+
size 445649
|
pathcoverage_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b8884fa93437792309898ea5a0be65af3a750ea4ab475a287875fe5e49239ec8
|
| 3 |
+
size 324471
|
pathcoverage_stratified_pathway_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:04c202cd8ebd8e3b1787c1e95c9f67587bee2d6716a7e64f0c26ad0b0b8662dd
|
| 3 |
+
size 302076
|
pathcoverage_stratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1afefa89a834a073c3218a79d2005066ed85f5fc0321e5bd8ca7fbfd5cd5a60b
|
| 3 |
+
size 362673
|
pathcoverage_unstratified_pathway.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:bc27f169288f699506fd42ae01241ae9983f308fbf3b0f0203abb31c9baef726
|
| 3 |
+
size 17546
|
pathcoverage_unstratified_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:eff0f37f000b11af4aa989fcb9c1f52a9b3f1853bfc11081d225daf6dc427414
|
| 3 |
+
size 17951
|
pathcoverage_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e3ab5f11a79a678afcfea687552c1e5f88d616b0e321ea846b97f83f5fdac939
|
| 3 |
+
size 389019
|
relative_abundance_clade_name_species.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9df27cf1caebeff04be89b8045d1f69236c429d6e0d8e29ae21f95497db582db
|
| 3 |
+
size 166081
|
relative_abundance_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6b55e69efd5915fae990b2b26d94b810506eebc6d9be7d3b7355a9d448a2b0cf
|
| 3 |
+
size 189365
|
viral_clusters_genome_name.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:11c0112760c3cdd8709d5b2fc93948abc773f4731e74612d575159e052894445
|
| 3 |
+
size 21245
|
viral_clusters_uuid.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b7f218012c0d5e0d0663445f974a064017706e534ef778e59474b87f04088305
|
| 3 |
+
size 21215
|