--- dataset_info: config_name: registry features: - name: sample_id dtype: large_string - name: source dtype: large_string - name: patient_id dtype: large_string - name: study_id dtype: large_string - name: split dtype: large_string - name: genomics_rna_bulk_paths list: 'null' - name: genomics_rna_bulk_feature_path dtype: large_string - name: genomics_dna_methylation_paths list: 'null' - name: genomics_dna_methylation_feature_path dtype: large_string - name: genomics_cnv_paths list: 'null' - name: genomics_cnv_feature_path dtype: large_string - name: pathology_wsi_paths list: string - name: radiology_image_paths list: string - name: pathology_mask_paths list: 'null' - name: pathology_segmentation_slide_image_paths list: 'null' - name: pathology_segmentation_overlay_paths list: 'null' - name: pathology_segmentation_metadata_paths list: 'null' - name: radiology_mask_paths list: 'null' - name: pathology_tile_embedding_paths list: 'null' - name: pathology_slide_embedding_paths list: 'null' - name: radiology_embedding_paths list: 'null' - name: biomarkers_text dtype: large_string - name: question dtype: large_string - name: answer dtype: large_string - name: split_group_id dtype: large_string - name: split_scheme_version dtype: large_string - name: project_id dtype: large_string - name: primary_site dtype: large_string - name: disease_type dtype: large_string - name: primary_diagnosis dtype: large_string - name: tumor_grade dtype: large_string - name: tumor_stage dtype: large_string - name: ajcc_pathologic_stage dtype: large_string - name: ajcc_pathologic_t dtype: large_string - name: ajcc_pathologic_n dtype: large_string - name: ajcc_pathologic_m dtype: large_string - name: age_at_diagnosis dtype: large_string - name: morphology dtype: large_string - name: last_known_disease_status dtype: large_string - name: days_to_last_known_disease_status dtype: large_string - name: days_to_recurrence dtype: large_string - name: vital_status dtype: large_string - name: days_to_last_follow_up dtype: large_string - name: days_to_death dtype: large_string - name: gender dtype: large_string - name: race dtype: large_string - name: ethnicity dtype: large_string - name: year_of_birth dtype: large_string - name: kidney_histology_subtype dtype: large_string - name: task_grade_label dtype: large_string - name: task_stage_label dtype: large_string - name: task_survival_event dtype: bool - name: task_survival_days dtype: float64 - name: mutation_ssm_ids list: 'null' - name: mutation_types list: 'null' - name: mutation_consequence_terms list: 'null' - name: mutated_gene_symbols list: 'null' - name: mutation_query_succeeded dtype: bool - name: mutation_panel_version dtype: large_string - name: mutation_panel_observed dtype: bool - name: mutation_event_count dtype: int64 - name: mutation_unique_gene_count dtype: int64 - name: project_driver_gene_mutations list: 'null' - name: pathology_file_ids list: string - name: tcia_collections list: string - name: tcia_study_uids list: string - name: tcia_series_uids list: string - name: tcia_modalities list: string - name: tcia_body_parts list: string - name: tcia_study_dates list: string - name: tcia_study_descriptions list: string - name: tcia_series_descriptions list: string - name: radiology_uri_paths list: string - name: radiology_download_paths list: 'null' - name: report_pdf_paths list: string - name: report_file_ids list: string - name: report_file_names list: string - name: has_pathology dtype: bool - name: has_radiology dtype: bool - name: mutation_ajuba dtype: bool - name: mutation_akt1 dtype: bool - name: mutation_apc dtype: bool - name: mutation_arid1a dtype: bool - name: mutation_arid2 dtype: bool - name: mutation_atm dtype: bool - name: mutation_atrx dtype: bool - name: mutation_bap1 dtype: bool - name: mutation_bcor dtype: bool - name: mutation_braf dtype: bool - name: mutation_casp8 dtype: bool - name: mutation_cd79b dtype: bool - name: mutation_cdh1 dtype: bool - name: mutation_cdkn2a dtype: bool - name: mutation_cftr dtype: bool - name: mutation_cic dtype: bool - name: mutation_cnbd1 dtype: bool - name: mutation_col5a1 dtype: bool - name: mutation_ctcf dtype: bool - name: mutation_ctnnb1 dtype: bool - name: mutation_ctnnd1 dtype: bool - name: mutation_cul3 dtype: bool - name: mutation_dyrk1a dtype: bool - name: mutation_egfr dtype: bool - name: mutation_eif1ax dtype: bool - name: mutation_ep300 dtype: bool - name: mutation_epas1 dtype: bool - name: mutation_erbb2 dtype: bool - name: mutation_fbxw7 dtype: bool - name: mutation_fgfr3 dtype: bool - name: mutation_flna dtype: bool - name: mutation_foxa1 dtype: bool - name: mutation_fubp1 dtype: bool - name: mutation_gna11 dtype: bool - name: mutation_gnaq dtype: bool - name: mutation_gnas dtype: bool - name: mutation_gtf2i dtype: bool - name: mutation_hla-b dtype: bool - name: mutation_hras dtype: bool - name: mutation_idh1 dtype: bool - name: mutation_idh2 dtype: bool - name: mutation_kansl1 dtype: bool - name: mutation_kcnq5 dtype: bool - name: mutation_kdm5c dtype: bool - name: mutation_kdm6a dtype: bool - name: mutation_kif1a dtype: bool - name: mutation_kit dtype: bool - name: mutation_kmt2b dtype: bool - name: mutation_kmt2c dtype: bool - name: mutation_kmt2d dtype: bool - name: mutation_kras dtype: bool - name: mutation_lats1 dtype: bool - name: mutation_map2k1 dtype: bool - name: mutation_map2k4 dtype: bool - name: mutation_map3k1 dtype: bool - name: mutation_max dtype: bool - name: mutation_mtor dtype: bool - name: mutation_myd88 dtype: bool - name: mutation_ncor1 dtype: bool - name: mutation_ndufs1 dtype: bool - name: mutation_nf1 dtype: bool - name: mutation_nf2 dtype: bool - name: mutation_notch1 dtype: bool - name: mutation_nras dtype: bool - name: mutation_nsd1 dtype: bool - name: mutation_nup93 dtype: bool - name: mutation_pbrm1 dtype: bool - name: mutation_pds5b dtype: bool - name: mutation_pik3ca dtype: bool - name: mutation_pik3r1 dtype: bool - name: mutation_pim1 dtype: bool - name: mutation_pten dtype: bool - name: mutation_rb1 dtype: bool - name: mutation_rbm10 dtype: bool - name: mutation_ret dtype: bool - name: mutation_rps6ka3 dtype: bool - name: mutation_rras2 dtype: bool - name: mutation_runx1 dtype: bool - name: mutation_rxra dtype: bool - name: mutation_scaf4 dtype: bool - name: mutation_setd2 dtype: bool - name: mutation_sf3b1 dtype: bool - name: mutation_smad4 dtype: bool - name: mutation_smc1a dtype: bool - name: mutation_spop dtype: bool - name: mutation_stag2 dtype: bool - name: mutation_stk11 dtype: bool - name: mutation_tp53 dtype: bool - name: mutation_tsc1 dtype: bool - name: mutation_vhl dtype: bool splits: - name: train num_bytes: 18826491 num_examples: 9712 - name: val num_bytes: 1106853 num_examples: 577 - name: test num_bytes: 2116939 num_examples: 1139 download_size: 6571233 dataset_size: 22050283 configs: - config_name: registry data_files: - split: train path: registry/train-* - split: val path: registry/val-* - split: test path: registry/test-* default: true ---