--- dataset_info: - config_name: sft_cell_context_scbasecount_contrastive_id_last_v1 features: - name: mode dtype: large_string - name: tissue dtype: large_string - name: tissue_A dtype: large_string - name: tissue_B dtype: large_string - name: cell_type dtype: large_string - name: cell_type_A dtype: large_string - name: cell_type_B dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file_A dtype: large_string - name: cell_file_B dtype: large_string splits: - name: train num_bytes: 20850763 num_examples: 3899 - name: validation num_bytes: 2327454 num_examples: 435 download_size: 7401548 dataset_size: 23178217 - config_name: sft_cell_context_scbasecount_contrastive_v1 features: - name: mode dtype: large_string - name: tissue dtype: large_string - name: tissue_A dtype: large_string - name: tissue_B dtype: large_string - name: cell_type dtype: large_string - name: cell_type_A dtype: large_string - name: cell_type_B dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file_A dtype: large_string - name: cell_file_B dtype: large_string splits: - name: train num_bytes: 20768884 num_examples: 3899 - name: validation num_bytes: 2318319 num_examples: 435 download_size: 7413306 dataset_size: 23087203 - config_name: sft_cell_context_scbasecount_id_first_v1 features: - name: sample_id dtype: large_string - name: cell_type dtype: large_string - name: srx_accession dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file dtype: large_string splits: - name: train num_bytes: 197095968 num_examples: 80517 - name: validation num_bytes: 24587687 num_examples: 10055 - name: test num_bytes: 24624785 num_examples: 10057 - name: ood_test num_bytes: 4614742 num_examples: 1937 download_size: 87200902 dataset_size: 250923182 - config_name: sft_cell_context_scbasecount_v1 features: - name: sample_id dtype: large_string - name: cell_type dtype: large_string - name: srx_accession dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file dtype: large_string splits: - name: train num_bytes: 196129764 num_examples: 80517 - name: validation num_bytes: 24467027 num_examples: 10055 - name: test num_bytes: 24504101 num_examples: 10057 - name: ood_test num_bytes: 4591498 num_examples: 1937 download_size: 87447391 dataset_size: 249692390 - config_name: sft_gene_pathway_v6_2_1k features: - name: sample_id dtype: large_string - name: gene_target dtype: large_string - name: cell_type dtype: large_string - name: pathway_name dtype: large_string - name: pathway_change dtype: large_string - name: pathway_magnitude dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file dtype: large_string splits: - name: train num_bytes: 9012157 num_examples: 881 - name: validation num_bytes: 469557 num_examples: 47 - name: test num_bytes: 469557 num_examples: 47 download_size: 4723007 dataset_size: 9951271 - config_name: sft_gene_pathway_v7_3_5k features: - name: sample_id dtype: large_string - name: gene_target dtype: large_string - name: cell_type dtype: large_string - name: pathway_name dtype: large_string - name: pathway_change dtype: large_string - name: pathway_magnitude dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file dtype: large_string splits: - name: train num_bytes: 54356168 num_examples: 5320 - name: validation num_bytes: 6074526 num_examples: 592 - name: test num_bytes: 6074526 num_examples: 592 download_size: 32979010 dataset_size: 66505220 - config_name: sft_gene_pathway_v7_3_5k_full features: - name: sample_id dtype: large_string - name: gene_target dtype: large_string - name: cell_type dtype: large_string - name: pathway_name dtype: large_string - name: pathway_change dtype: large_string - name: pathway_magnitude dtype: large_string - name: question dtype: large_string - name: reasoning dtype: large_string - name: answer dtype: large_string - name: cell_file dtype: large_string splits: - name: train num_bytes: 71537283 num_examples: 5320 - name: validation num_bytes: 8015655 num_examples: 592 - name: test num_bytes: 8015655 num_examples: 592 download_size: 41385153 dataset_size: 87568593 - config_name: sft_gene_pathway_v7_5_50k features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 460379852 num_examples: 47694 - name: validation num_bytes: 51178178 num_examples: 5300 - name: test num_bytes: 51178178 num_examples: 5300 download_size: 282563907 dataset_size: 562736208 - config_name: sft_gene_pathway_v7_5_50k_answeronly features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 211700183 num_examples: 47694 - name: validation num_bytes: 23557703 num_examples: 5300 - name: test num_bytes: 23557703 num_examples: 5300 download_size: 114277645 dataset_size: 258815589 - config_name: sft_gene_pathway_v7_5_50k_celldesc features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 581780219 num_examples: 47694 - name: validation num_bytes: 64668220 num_examples: 5300 - name: test num_bytes: 64668220 num_examples: 5300 download_size: 352430925 dataset_size: 711116659 - config_name: sft_gene_pathway_v7_5_50k_full features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 675647828 num_examples: 47694 - name: validation num_bytes: 75152138 num_examples: 5300 - name: test num_bytes: 75152138 num_examples: 5300 download_size: 387294484 dataset_size: 825952104 - config_name: sft_gene_pathway_v7_5_50k_full_answeronly features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 426880414 num_examples: 47694 - name: validation num_bytes: 47523997 num_examples: 5300 - name: test num_bytes: 47523997 num_examples: 5300 download_size: 218116042 dataset_size: 521928408 - config_name: sft_gene_pathway_v7_5_50k_full_blinddesc features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 675103641 num_examples: 47694 - name: validation num_bytes: 75091680 num_examples: 5300 - name: test num_bytes: 75091680 num_examples: 5300 download_size: 382220592 dataset_size: 825287001 - config_name: sft_gene_pathway_v7_5_50k_full_celldesc features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 796960450 num_examples: 47694 - name: validation num_bytes: 88634514 num_examples: 5300 - name: test num_bytes: 88634514 num_examples: 5300 download_size: 469503857 dataset_size: 974229478 - config_name: sft_gene_pathway_v7_5_50k_full_label features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 703436166 num_examples: 47694 - name: validation num_bytes: 78240106 num_examples: 5300 - name: test num_bytes: 78240106 num_examples: 5300 download_size: 388226694 dataset_size: 859916378 - config_name: sft_gene_pathway_v7_5_50k_full_labelonly features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 360125162 num_examples: 47694 - name: validation num_bytes: 40092157 num_examples: 5300 - name: test num_bytes: 40092157 num_examples: 5300 download_size: 173333220 dataset_size: 440309476 - config_name: sft_gene_pathway_v7_5_50k_labelonly features: - name: sample_id dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: cell_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 144944931 num_examples: 47694 - name: validation num_bytes: 16125863 num_examples: 5300 - name: test num_bytes: 16125863 num_examples: 5300 download_size: 69459792 dataset_size: 177196657 configs: - config_name: sft_cell_context_scbasecount_contrastive_id_last_v1 data_files: - split: train path: sft_cell_context_scbasecount_contrastive_id_last_v1/train-* - split: validation path: sft_cell_context_scbasecount_contrastive_id_last_v1/validation-* - config_name: sft_cell_context_scbasecount_contrastive_v1 data_files: - split: train path: sft_cell_context_scbasecount_contrastive_v1/train-* - split: validation path: sft_cell_context_scbasecount_contrastive_v1/validation-* - config_name: sft_cell_context_scbasecount_id_first_v1 data_files: - split: train path: sft_cell_context_scbasecount_id_first_v1/train-* - split: validation path: sft_cell_context_scbasecount_id_first_v1/validation-* - split: test path: sft_cell_context_scbasecount_id_first_v1/test-* - split: ood_test path: sft_cell_context_scbasecount_id_first_v1/ood_test-* - config_name: sft_cell_context_scbasecount_v1 data_files: - split: train path: sft_cell_context_scbasecount_v1/train-* - split: validation path: sft_cell_context_scbasecount_v1/validation-* - split: test path: sft_cell_context_scbasecount_v1/test-* - split: ood_test path: sft_cell_context_scbasecount_v1/ood_test-* - config_name: sft_gene_pathway_v6_2_1k data_files: - split: train path: sft_gene_pathway_v6_2_1k/train-* - split: validation path: sft_gene_pathway_v6_2_1k/validation-* - split: test path: sft_gene_pathway_v6_2_1k/test-* - config_name: sft_gene_pathway_v7_3_5k data_files: - split: train path: sft_gene_pathway_v7_3_5k/train-* - split: validation path: sft_gene_pathway_v7_3_5k/validation-* - split: test path: sft_gene_pathway_v7_3_5k/test-* - config_name: sft_gene_pathway_v7_3_5k_full data_files: - split: train path: sft_gene_pathway_v7_3_5k_full/train-* - split: validation path: sft_gene_pathway_v7_3_5k_full/validation-* - split: test path: sft_gene_pathway_v7_3_5k_full/test-* - config_name: sft_gene_pathway_v7_5_50k data_files: - split: train path: sft_gene_pathway_v7_5_50k/train-* - split: validation path: sft_gene_pathway_v7_5_50k/validation-* - split: test path: sft_gene_pathway_v7_5_50k/test-* - config_name: sft_gene_pathway_v7_5_50k_answeronly data_files: - split: train path: sft_gene_pathway_v7_5_50k_answeronly/train-* - split: validation path: sft_gene_pathway_v7_5_50k_answeronly/validation-* - split: test path: sft_gene_pathway_v7_5_50k_answeronly/test-* - config_name: sft_gene_pathway_v7_5_50k_celldesc data_files: - split: train path: sft_gene_pathway_v7_5_50k_celldesc/train-* - split: validation path: sft_gene_pathway_v7_5_50k_celldesc/validation-* - split: test path: sft_gene_pathway_v7_5_50k_celldesc/test-* - config_name: sft_gene_pathway_v7_5_50k_full data_files: - split: train path: sft_gene_pathway_v7_5_50k_full/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full/test-* - config_name: sft_gene_pathway_v7_5_50k_full_answeronly data_files: - split: train path: sft_gene_pathway_v7_5_50k_full_answeronly/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full_answeronly/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full_answeronly/test-* - config_name: sft_gene_pathway_v7_5_50k_full_blinddesc data_files: - split: train path: sft_gene_pathway_v7_5_50k_full_blinddesc/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full_blinddesc/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full_blinddesc/test-* - config_name: sft_gene_pathway_v7_5_50k_full_celldesc data_files: - split: train path: sft_gene_pathway_v7_5_50k_full_celldesc/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full_celldesc/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full_celldesc/test-* - config_name: sft_gene_pathway_v7_5_50k_full_label data_files: - split: train path: sft_gene_pathway_v7_5_50k_full_label/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full_label/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full_label/test-* - config_name: sft_gene_pathway_v7_5_50k_full_labelonly data_files: - split: train path: sft_gene_pathway_v7_5_50k_full_labelonly/train-* - split: validation path: sft_gene_pathway_v7_5_50k_full_labelonly/validation-* - split: test path: sft_gene_pathway_v7_5_50k_full_labelonly/test-* - config_name: sft_gene_pathway_v7_5_50k_labelonly data_files: - split: train path: sft_gene_pathway_v7_5_50k_labelonly/train-* - split: validation path: sft_gene_pathway_v7_5_50k_labelonly/validation-* - split: test path: sft_gene_pathway_v7_5_50k_labelonly/test-* ---