Hugging Face's logo

Datasets:
willdaspit
/
afdb_50_sequence_clustered

Modalities:
Tabular
Text
Formats:
parquet
Size:
100M - 1B
Libraries:
Datasets
pandas
Dataset card Data Studio Files
xet
 Community
1
willdaspit commited on
Commit
aa1e07d
·
verified ·
1 Parent(s): 4bf2833

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +4 -2
README.md CHANGED
@@ -1,9 +1,11 @@
1
  Annotated sequences from the AFDB50 (sequence-based, not structure-based) clustering at https://afdb-cluster.steineggerlab.workers.dev/
2
 
3
- Two rows with the same RepId are part of the same cluster.
 
 
4
 
5
  Singletons are included.
6
 
7
  All plddts are included.
8
 
9
- All are annotated with the plddt, Shannon entropy of the sequence, Shannon entropy of bigrams, and Gini-Simpson index of the sequence.
 
1
  Annotated sequences from the AFDB50 (sequence-based, not structure-based) clustering at https://afdb-cluster.steineggerlab.workers.dev/
2
 
3
+ Two rows with the same RepId are part of the same cluster. Similarly, two rows with the same cluster_id are part of the same cluster.
4
+
5
+ cluster_id is in order from smallest to largest cluster - that is, members of the smallest cluster have cluster_id=0.
6
 
7
  Singletons are included.
8
 
9
  All plddts are included.
10
 
11
+ All are annotated with the number of cluster members, plddt, Shannon entropy of the sequence, Shannon entropy of bigrams, and Gini-Simpson index of the sequence.