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README.md
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Sequences for (almost) the entire alphafold database.
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RepId uses the clusters provided at https://afdb-cluster.steineggerlab.workers.dev/
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Singletons are included. Fragments (as labeled in 5-allmembers-repId-entryId-cluFlag-taxId.tsv) are not.
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Entries with plddt < 70 are filtered out.
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All are annotated with the plddt, Shannon entropy of the sequence,
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Sequences for (almost) the entire alphafold database.
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RepId uses the clusters provided at https://afdb-cluster.steineggerlab.workers.dev/
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Two rows with the same RepId are part of the same cluster.
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Singletons are included. Fragments (as labeled in 5-allmembers-repId-entryId-cluFlag-taxId.tsv) are not.
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Entries with plddt < 70 are filtered out.
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All are annotated with the plddt, Shannon entropy of the sequence, Shannon entropy of bigrams, Gini-Simpson index of the sequence, and Gini-Simpson index of bigrams.
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