coredd-bench / src /coredd /metrics.py
witrin's picture
Pool metrics by default and derive score and interval from the MC draws
7deba50 verified
Raw
History Blame Contribute Delete
2.02 kB
"""Metrics for the benchmark, with the sklearn calling convention.
Every metric is called ``metric(y_true, y_pred)`` on 1-D arrays over candidate nodes --
by default the nodes of every change pooled together, with ``pooled=False`` the nodes
of one change at a time -- so any scikit-learn classification metric drops in unchanged
and CoReDD stays metric-agnostic. This module only keeps what scikit-learn does not
provide: the ``rank`` marker, ``mrr``, and an ``auroc`` wrapper that is NaN where
``roc_auc_score`` raises, so a degenerate change is dropped from a per-case average
rather than aborting the run.
A metric is either **label** (``y_pred`` is boolean: which nodes were predicted) or
**rank** (``y_pred`` is a per-node score). The ``rank`` marker tells the evaluator to
hand the metric the node scores rather than a boolean mask. Pass ``sklearn.metrics``
functions directly for label metrics; they are treated as label by default.
"""
from __future__ import annotations
import numpy as np
from sklearn.metrics import roc_auc_score
def rank(func):
"""Mark a metric as consuming per-node scores rather than a boolean mask."""
func.rank = True
return func
def is_rank(metric) -> bool:
"""Whether a metric expects scores (``rank``) instead of a boolean prediction."""
return bool(getattr(metric, "rank", False))
@rank
def mrr(y_true, scores) -> float:
"""Reciprocal rank of the first true positive under the score order; NaN if none."""
y_true = np.asarray(y_true, dtype=bool)
scores = np.asarray(scores, dtype=float)
order = np.argsort(-scores, kind="stable")
ranked = y_true[order]
if not ranked.any():
return float("nan")
return 1.0 / (int(np.argmax(ranked)) + 1)
@rank
def auroc(y_true, scores) -> float:
"""ROC AUC; NaN when there is no positive or no negative to separate."""
y_true = np.asarray(y_true, dtype=bool)
if not y_true.any() or y_true.all():
return float("nan")
return float(roc_auc_score(y_true, scores))