Upload folder using huggingface_hub
Browse files- HC_NEU_006_dataset.csv +0 -0
- HC_NEU_006_schema.json +111 -0
- README.md +404 -0
HC_NEU_006_dataset.csv
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HC_NEU_006_schema.json
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| 1 |
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{
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| 2 |
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"patient_id": "str",
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| 3 |
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"headache_subtype": "str",
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| 4 |
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"sex": "str",
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| 5 |
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"age_at_baseline": "int64",
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| 6 |
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"race_ethnicity": "str",
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| 7 |
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"education_years": "int64",
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| 8 |
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"geographic_region": "str",
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| 9 |
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"bmi": "float64",
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| 10 |
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"obesity_flag": "int64",
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| 11 |
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"anxiety_disorder_flag": "int64",
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| 12 |
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"depression_flag": "int64",
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| 13 |
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"fibromyalgia_flag": "int64",
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| 14 |
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"sleep_disorder_flag": "int64",
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| 15 |
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"hypertension_flag": "int64",
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| 16 |
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"ocp_use_flag": "int64",
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| 17 |
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"psychiatric_medication_flag": "int64",
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| 18 |
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"prior_er_visit_flag": "int64",
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| 19 |
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"headache_specialist_flag": "int64",
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| 20 |
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"headache_days_per_month": "int64",
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| 21 |
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"migraine_days_per_month": "int64",
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| 22 |
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"headache_duration_hours": "float64",
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| 23 |
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"pain_intensity_nrs": "float64",
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| 24 |
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"pain_location": "str",
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| 25 |
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"pain_character": "str",
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| 26 |
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"aggravation_by_activity": "int64",
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| 27 |
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"nausea_flag": "int64",
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| 28 |
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"vomiting_flag": "int64",
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| 29 |
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"photophobia_flag": "int64",
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| 30 |
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"phonophobia_flag": "int64",
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| 31 |
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"osmophobia_flag": "int64",
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| 32 |
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"allodynia_score_asc12": "int64",
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| 33 |
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"cutaneous_allodynia_flag": "int64",
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| 34 |
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"chronification_risk_score": "float64",
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| 35 |
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"prodrome_flag": "int64",
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| 36 |
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"prodrome_duration_hours": "float64",
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| 37 |
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"prodrome_symptoms": "str",
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| 38 |
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"aura_flag": "int64",
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| 39 |
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"aura_type": "str",
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| 40 |
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"aura_duration_minutes": "int64",
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| 41 |
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"visual_aura_subtype": "str",
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| 42 |
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"spreading_depression_proxy": "float64",
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| 43 |
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"postdrome_flag": "int64",
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| 44 |
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"postdrome_duration_hours": "float64",
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| 45 |
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"postdrome_symptoms": "str",
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| 46 |
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"trigger_stress": "int64",
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| 47 |
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"trigger_sleep_disruption": "int64",
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| 48 |
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"trigger_hormonal": "int64",
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| 49 |
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"trigger_weather_barometric": "int64",
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| 50 |
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"trigger_skipped_meals": "int64",
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| 51 |
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"trigger_bright_light": "int64",
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| 52 |
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"trigger_strong_odors": "int64",
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| 53 |
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"trigger_dehydration": "int64",
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| 54 |
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"trigger_alcohol": "int64",
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| 55 |
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"trigger_caffeine_withdrawal": "int64",
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| 56 |
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"trigger_dietary_tyramine": "int64",
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| 57 |
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"trigger_physical_exertion": "int64",
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| 58 |
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"n_triggers_reported": "int64",
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| 59 |
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"trigger_screen_time_hours": "float64",
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| 60 |
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"trigger_reliability_score": "float64",
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| 61 |
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"menstrual_cycle_day": "int64",
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| 62 |
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"perimenstrual_attack_flag": "int64",
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| 63 |
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"acute_treatment_name": "str",
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| 64 |
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"acute_treatment_class": "str",
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| 65 |
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"acute_dose_mg": "int64",
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| 66 |
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"time_to_treat_hours": "float64",
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| 67 |
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"pain_free_2hr_flag": "int64",
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| 68 |
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"pain_relief_2hr_flag": "int64",
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| 69 |
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"most_bothersome_symptom_relief": "int64",
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| 70 |
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"sustained_pain_free_24hr": "int64",
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| 71 |
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"rescue_medication_flag": "int64",
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| 72 |
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"medication_overuse_days": "int64",
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| 73 |
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"medication_overuse_headache_flag": "int64",
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| 74 |
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"treatment_satisfaction_score": "float64",
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| 75 |
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"preventive_medication": "str",
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| 76 |
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"preventive_class": "str",
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| 77 |
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"preventive_dose_mg": "int64",
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| 78 |
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"botox_units": "int64",
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| 79 |
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"preventive_duration_months": "int64",
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| 80 |
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"preventive_adherence_pct": "float64",
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| 81 |
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"monthly_mmd_reduction": "float64",
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| 82 |
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"responder_50pct_flag": "int64",
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| 83 |
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"responder_75pct_flag": "int64",
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| 84 |
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"cgrp_mechanism_flag": "int64",
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| 85 |
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"preventive_discontinuation_flag": "int64",
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| 86 |
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"discontinuation_reason": "str",
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| 87 |
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"midas_score": "int64",
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| 88 |
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"midas_grade": "str",
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| 89 |
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"hit6_score": "int64",
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| 90 |
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"promis_pain_interference_t": "float64",
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| 91 |
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"work_days_lost_per_month": "float64",
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| 92 |
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"presenteeism_days_per_month": "float64",
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| 93 |
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"global_productivity_loss_pct": "float64",
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| 94 |
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"sf12_pcs": "float64",
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| 95 |
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"sf12_mcs": "float64",
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| 96 |
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"phq9_score": "int64",
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| 97 |
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"gad7_score": "int64",
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| 98 |
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"psqi_score": "int64",
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| 99 |
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"caregiver_burden_score": "float64",
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| 100 |
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"healthcare_visits_per_year": "int64",
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| 101 |
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"annual_migraine_cost_usd": "float64",
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| 102 |
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"plasma_cgrp_pg_ml": "float64",
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| 103 |
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"plasma_cgrp_ictal_flag": "int64",
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| 104 |
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"cgrp_response_index": "float64",
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| 105 |
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"plasma_serotonin_ng_ml": "float64",
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| 106 |
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"cortisol_am_ug_dl": "float64",
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| 107 |
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"magnesium_serum_mg_dl": "float64",
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| 108 |
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"magnesium_deficiency_flag": "int64",
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| 109 |
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"inflammatory_index": "float64",
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| 110 |
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"autonomic_dysfunction_score": "float64"
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| 111 |
+
}
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README.md
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@@ -0,0 +1,404 @@
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| 1 |
+
---
|
| 2 |
+
license: cc-by-nc-4.0
|
| 3 |
+
task_categories:
|
| 4 |
+
- tabular-classification
|
| 5 |
+
- tabular-regression
|
| 6 |
+
language:
|
| 7 |
+
- en
|
| 8 |
+
tags:
|
| 9 |
+
- synthetic
|
| 10 |
+
- migraine
|
| 11 |
+
- headache
|
| 12 |
+
- chronic-migraine
|
| 13 |
+
- ichd-3
|
| 14 |
+
- ampp
|
| 15 |
+
- cameo
|
| 16 |
+
- cgrp
|
| 17 |
+
- cgrp-mab
|
| 18 |
+
- erenumab
|
| 19 |
+
- fremanezumab
|
| 20 |
+
- galcanezumab
|
| 21 |
+
- eptinezumab
|
| 22 |
+
- atogepant
|
| 23 |
+
- triptan
|
| 24 |
+
- sumatriptan
|
| 25 |
+
- rimegepant
|
| 26 |
+
- ubrogepant
|
| 27 |
+
- lasmiditan
|
| 28 |
+
- aura
|
| 29 |
+
- midas
|
| 30 |
+
- hit-6
|
| 31 |
+
- neurology
|
| 32 |
+
- clinical-trial
|
| 33 |
+
- tension-headache
|
| 34 |
+
- cluster-headache
|
| 35 |
+
- medication-overuse-headache
|
| 36 |
+
pretty_name: "HC-NEU-006 — Migraine & Chronic Headache Dataset (Sample)"
|
| 37 |
+
size_categories:
|
| 38 |
+
- 1K<n<10K
|
| 39 |
+
---
|
| 40 |
+
|
| 41 |
+
# HC-NEU-006 — Migraine & Chronic Headache Dataset (Sample)
|
| 42 |
+
|
| 43 |
+
A schema-identical preview of **HC-NEU-006**, the XpertSystems.ai
|
| 44 |
+
synthetic **migraine and chronic headache patient cohort** dataset for
|
| 45 |
+
clinical trial research, CGRP-era treatment outcome modeling, ICHD-3
|
| 46 |
+
subtype classification ML, AMPP / CaMEO-comparable headache analytics,
|
| 47 |
+
and migraine-specific machine learning. The full product covers 10,000
|
| 48 |
+
patients; this sample is HF-sized at 3,000 patients.
|
| 49 |
+
|
| 50 |
+
> **Built by** XpertSystems.ai — Synthetic Data Platform
|
| 51 |
+
> **Contact** [pradeep@xpertsystems.ai](mailto:pradeep@xpertsystems.ai) · [xpertsystems.ai](https://xpertsystems.ai)
|
| 52 |
+
> **License** CC-BY-NC-4.0 (sample); commercial license available for the full product.
|
| 53 |
+
|
| 54 |
+
---
|
| 55 |
+
|
| 56 |
+
## What HC-NEU-006 does — and how it grows the Healthcare/Neurology vertical
|
| 57 |
+
|
| 58 |
+
HC-NEU-006 is the **sixth Healthcare / Neurology SKU** in the
|
| 59 |
+
XpertSystems catalog. After AD, PD, Epilepsy, MS, and Stroke, the
|
| 60 |
+
catalog now extends into **chronic episodic neurology** — diseases
|
| 61 |
+
managed primarily through pharmacological symptom and prevention
|
| 62 |
+
strategies, rather than acute interventional or neuroprotective trials.
|
| 63 |
+
|
| 64 |
+
| SKU | Disease | US Patients | Annual Pharma R&D | Architecture |
|
| 65 |
+
|---|---|---|---|---|
|
| 66 |
+
| HC-NEU-001 | Alzheimer's | 6.9M | $8B | Single longitudinal |
|
| 67 |
+
| HC-NEU-002 | Parkinson's | 1.0M | $5B | Single longitudinal |
|
| 68 |
+
| HC-NEU-003 | Epilepsy | 3.4M | $3B | Cross-sectional |
|
| 69 |
+
| HC-NEU-004 | Multiple Sclerosis | 1.0M | $6B | Multi-table relational |
|
| 70 |
+
| HC-NEU-005 | Stroke | 7.0M | $3B | Cross-sectional |
|
| 71 |
+
| HC-NEU-006 | **Migraine & Headache** | **39M** | **$5B+** | **Cross-sectional** |
|
| 72 |
+
|
| 73 |
+
**Migraine is the single largest neurology cohort by patient count** —
|
| 74 |
+
~39M Americans, with ~9M chronic migraine sufferers. The CGRP era
|
| 75 |
+
(Erenumab/Fremanezumab/Galcanezumab/Eptinezumab + Ubrogepant/Rimegepant/
|
| 76 |
+
Atogepant) has transformed migraine treatment over the last 6 years,
|
| 77 |
+
creating a huge market for clinical research and real-world data.
|
| 78 |
+
|
| 79 |
+
This is the substrate **migraine pharma R&D teams, CGRP-era market
|
| 80 |
+
analytics, headache specialist clinic analytics, and migraine-specific
|
| 81 |
+
ML teams** have been waiting for: a coherent cross-sectional dataset
|
| 82 |
+
where ICHD-3 subtype × triggers × CGRP biomarkers × acute treatments
|
| 83 |
+
× CGRP mAb preventive response × disability outcomes all interact
|
| 84 |
+
with **STRIVE / HALO / EVOLVE / PROMISE-2 trial-grade calibration**.
|
| 85 |
+
|
| 86 |
+
| Buyer Persona | Use Case |
|
| 87 |
+
|---|---|
|
| 88 |
+
| Migraine Pharma R&D | CGRP mAb comparator modeling, trial design |
|
| 89 |
+
| CGRP-Era Market Analytics | Treatment-switching pattern analytics |
|
| 90 |
+
| Headache Specialist Clinic | AMPP / CaMEO-comparable benchmarking |
|
| 91 |
+
| MIDAS / HIT-6 Modeling | Disability outcome ML training |
|
| 92 |
+
| Trigger-Pattern ML | 13-trigger × headache-day prediction |
|
| 93 |
+
| Pediatric & Cluster Headache | Subtype-specific cohort enrichment |
|
| 94 |
+
| Migraine Digital Therapeutic | Treatment-response wearable ML |
|
| 95 |
+
| Real-World Evidence (RWE) | CGRP mAb adherence + discontinuation analytics |
|
| 96 |
+
| Migraine Genetics | Aura subtype + family history phenotype ML |
|
| 97 |
+
|
| 98 |
+
---
|
| 99 |
+
|
| 100 |
+
## What's inside
|
| 101 |
+
|
| 102 |
+
**Single cross-sectional dataframe**, one row per patient. 9 clinical
|
| 103 |
+
modules concatenated horizontally.
|
| 104 |
+
|
| 105 |
+
| Output | Rows (sample) | Columns | Size |
|
| 106 |
+
|---|---:|---:|---|
|
| 107 |
+
| `HC_NEU_006_dataset.csv` | 3,000 | 109 | ~1.5 MB |
|
| 108 |
+
|
| 109 |
+
Schema provided in `HC_NEU_006_schema.json`.
|
| 110 |
+
|
| 111 |
+
### Module structure (109 columns total)
|
| 112 |
+
|
| 113 |
+
| Module | Cols | Coverage |
|
| 114 |
+
|---|---:|---|
|
| 115 |
+
| Demographics | 8 | sex, age, race/ethnicity, education, region, BMI |
|
| 116 |
+
| Comorbidities | 10 | obesity, anxiety, depression, fibromyalgia, sleep, HTN, OCP, psych med, ER, specialist |
|
| 117 |
+
| Headache characterization | 15 | subtype, HDM, MDM, duration, pain intensity/location/character, nausea, photophobia, allodynia |
|
| 118 |
+
| Prodrome/aura | 9 | flags, duration, symptoms, aura type, visual aura subtype, postdrome |
|
| 119 |
+
| Triggers | 17 | 13-class trigger panel + n_triggers + screen time + menstrual cycle |
|
| 120 |
+
| Acute treatment | 12 | 11-agent panel, class, dose, time-to-treat, pain-free/relief 2hr, rescue, MOH |
|
| 121 |
+
| Preventive treatment | 12 | 11-agent panel, class, dose, MMD reduction, 50/75% responder, adherence, discontinuation |
|
| 122 |
+
| Disability/QoL | 14 | MIDAS, HIT-6, SF-12 PCS/MCS, PHQ-9, GAD-7, PSQI, work loss, productivity, cost |
|
| 123 |
+
| Biomarkers | 8 | plasma CGRP, ictal flag, serotonin, cortisol, magnesium, inflammatory, autonomic |
|
| 124 |
+
|
| 125 |
+
---
|
| 126 |
+
|
| 127 |
+
## Calibration sources
|
| 128 |
+
|
| 129 |
+
Every distribution is anchored to **named clinical references**. The
|
| 130 |
+
headline anchors are **AMPP** (American Migraine Prevalence and Prevention
|
| 131 |
+
Study), **CaMEO** (Chronic Migraine Epidemiology and Outcomes Study),
|
| 132 |
+
and the four pivotal **CGRP mAb trials** (STRIVE / HALO / EVOLVE /
|
| 133 |
+
PROMISE-2). Other anchors:
|
| 134 |
+
|
| 135 |
+
- **ICHD-3 Diagnostic Criteria (Headache Classification Committee 2018)** —
|
| 136 |
+
6-class headache subtype taxonomy.
|
| 137 |
+
- **AMPP Study (Bigal 2008 + Lipton 2007)** — US migraine prevalence,
|
| 138 |
+
triggers, demographics.
|
| 139 |
+
- **CaMEO Study (Buse 2013 + Lipton 2014)** — chronic migraine
|
| 140 |
+
epidemiology, longitudinal outcomes.
|
| 141 |
+
- **STRIVE Trial (Goadsby 2017 NEJM)** — Erenumab Phase 3, MMD reduction,
|
| 142 |
+
50% responder rate.
|
| 143 |
+
- **HALO-EM/CM Trials (Silberstein 2017 NEJM)** — Fremanezumab Phase 3.
|
| 144 |
+
- **EVOLVE-1/2 Trials (Stauffer 2018 JAMA)** — Galcanezumab Phase 3.
|
| 145 |
+
- **PROMISE-2 Trial (Lipton 2020 Neurology)** — Eptinezumab Phase 3.
|
| 146 |
+
- **ACHIEVE-I/II Trials** — Ubrogepant Phase 3 (acute gepant).
|
| 147 |
+
- **Bigal 2006 Neurology** — Obesity-migraine bidirectional risk.
|
| 148 |
+
- **Edvinsson 2018 Cephalalgia + Goadsby 1990** — Plasma CGRP biomarker
|
| 149 |
+
norms.
|
| 150 |
+
- **Cernuda-Morollón 2013** — Chronic migraine CGRP elevation.
|
| 151 |
+
- **Mauskop 2012 Headache + Welch 2001** — Magnesium-migraine link.
|
| 152 |
+
- **Lipton 2014** — AMPP trigger frequency study.
|
| 153 |
+
- **Ferrari 2001 Lancet** — Triptan efficacy meta-analysis.
|
| 154 |
+
|
| 155 |
+
---
|
| 156 |
+
|
| 157 |
+
## Validation scorecard
|
| 158 |
+
|
| 159 |
+
The wrapper ships a 10-metric AMPP/CaMEO/CGRP-trial-anchored scorecard
|
| 160 |
+
(`validation_scorecard.json`) that re-scores the dataset on every
|
| 161 |
+
generation. Default seed 42 result:
|
| 162 |
+
|
| 163 |
+
| ID | Metric | Target | Observed | Source |
|
| 164 |
+
|---|---|---|---:|---|
|
| 165 |
+
| M01 | Chronic Migraine Share | 0.15–0.25 | **0.199** | **ICHD-3 / AMPP** |
|
| 166 |
+
| M02 | Episodic Migraine HDM Mean | 3–8 | **4.70** | **CaMEO (Buse 2013)** |
|
| 167 |
+
| M03 | Chronic Migraine HDM Mean | 14–22 | **18.39** | **ICHD-3 (≥15)** |
|
| 168 |
+
| M04 | Pain Intensity NRS Mean | 5–8 | **6.33** | AMPP + CaMEO |
|
| 169 |
+
| M05 | CGRP mAb MMD Reduction | 2.5–4.5 days | **3.71** | **STRIVE / HALO / EVOLVE / PROMISE-2** |
|
| 170 |
+
| M06 | Plasma CGRP Mean | 40–110 pg/mL | **54.97** | Edvinsson 2018 + Cernuda-Morollón |
|
| 171 |
+
| M07 | Obesity (Chronic Migraine) | 0.20–0.40 | **0.275** | **Bigal 2006 Neurology** |
|
| 172 |
+
| M08 | Magnesium Deficiency | 0.30–0.60 | **0.430** | Mauskop 2012 / Welch 2001 |
|
| 173 |
+
| M09 | Stress Trigger Reported | 0.60–0.90 | **0.803** | AMPP (Lipton 2014) |
|
| 174 |
+
| M10 | Female Patient Share | 0.62–0.82 | **0.690** | AMPP / GBD Migraine 2019 |
|
| 175 |
+
|
| 176 |
+
**Grade: A+ (100/100). Verified across seeds 42, 7, 123, 2024, 99, 1.**
|
| 177 |
+
|
| 178 |
+
**Standout calibration**: M01 chronic migraine share lands within
|
| 179 |
+
0.13 percentage points of the ICHD-3 / AMPP 20% target. **M05 CGRP mAb
|
| 180 |
+
MMD reduction (3.71 days) lands within 0.21 days of the STRIVE / HALO /
|
| 181 |
+
EVOLVE / PROMISE-2 pooled mean of 3.5 days** — the exact CGRP-era
|
| 182 |
+
clinical efficacy benchmark. M03 chronic migraine HDM (18.39) lands
|
| 183 |
+
directly in the ICHD-3 ≥15 range center.
|
| 184 |
+
|
| 185 |
+
---
|
| 186 |
+
|
| 187 |
+
## Suggested use cases
|
| 188 |
+
|
| 189 |
+
- **CGRP-era treatment-response modeling** — patient features +
|
| 190 |
+
preventive class → MMD reduction prediction with STRIVE-calibrated
|
| 191 |
+
CGRP mAb response.
|
| 192 |
+
- **ICHD-3 subtype classification** — 6-class headache subtype ML from
|
| 193 |
+
symptom + aura + duration features.
|
| 194 |
+
- **Disability outcome forecasting** — MIDAS + HIT-6 prediction from
|
| 195 |
+
baseline features and treatment regimen.
|
| 196 |
+
- **Trigger-pattern ML** — 13-trigger feature space × headache_days_per_month
|
| 197 |
+
for trigger-impact modeling.
|
| 198 |
+
- **Aura subtype detection** — visual aura sub-typing (scintillating
|
| 199 |
+
scotoma vs fortification spectra vs blurred vision) from prodrome +
|
| 200 |
+
duration features.
|
| 201 |
+
- **CGRP biomarker validation** — plasma CGRP × headache_subtype ×
|
| 202 |
+
treatment_class × MMD outcome for biomarker development.
|
| 203 |
+
- **Medication overuse headache (MOH) risk modeling** — acute
|
| 204 |
+
medication frequency + class × MOH progression prediction.
|
| 205 |
+
- **AMPP / CaMEO comparable cohort analytics** — for healthcare data
|
| 206 |
+
scientists building published-study-comparable models without IRB
|
| 207 |
+
registry access.
|
| 208 |
+
- **Health economics / HEOR** — work_days_lost + productivity +
|
| 209 |
+
annual_migraine_cost_usd for migraine cost-effectiveness modeling.
|
| 210 |
+
- **Migraine + comorbidity multi-modal** — anxiety / depression /
|
| 211 |
+
fibromyalgia / sleep_disorder co-occurrence ML.
|
| 212 |
+
|
| 213 |
+
---
|
| 214 |
+
|
| 215 |
+
## Loading
|
| 216 |
+
|
| 217 |
+
```python
|
| 218 |
+
from datasets import load_dataset
|
| 219 |
+
|
| 220 |
+
ds = load_dataset(
|
| 221 |
+
"xpertsystems/hcneu006-sample",
|
| 222 |
+
data_files="HC_NEU_006_dataset.csv",
|
| 223 |
+
split="train",
|
| 224 |
+
)
|
| 225 |
+
```
|
| 226 |
+
|
| 227 |
+
Or with pandas directly:
|
| 228 |
+
|
| 229 |
+
```python
|
| 230 |
+
import pandas as pd
|
| 231 |
+
from huggingface_hub import hf_hub_download
|
| 232 |
+
|
| 233 |
+
path = hf_hub_download(
|
| 234 |
+
repo_id="xpertsystems/hcneu006-sample",
|
| 235 |
+
filename="HC_NEU_006_dataset.csv",
|
| 236 |
+
repo_type="dataset",
|
| 237 |
+
)
|
| 238 |
+
df = pd.read_csv(path)
|
| 239 |
+
```
|
| 240 |
+
|
| 241 |
+
The dataset ships with `HC_NEU_006_schema.json` providing per-column
|
| 242 |
+
dtypes for pipeline integration:
|
| 243 |
+
|
| 244 |
+
```python
|
| 245 |
+
import json
|
| 246 |
+
schema = json.load(open("HC_NEU_006_schema.json"))
|
| 247 |
+
# {"patient_id": "object", "headache_subtype": "object", "headache_days_per_month": "int64", ...}
|
| 248 |
+
```
|
| 249 |
+
|
| 250 |
+
Cross-sectional, one row per patient — like HC-NEU-003 (Epilepsy) and
|
| 251 |
+
HC-NEU-005 (Stroke). For longitudinal trajectory analysis on individual
|
| 252 |
+
patients, use the full product which carries 24-month monthly diary
|
| 253 |
+
sub-records.
|
| 254 |
+
|
| 255 |
+
---
|
| 256 |
+
|
| 257 |
+
## Schema highlights
|
| 258 |
+
|
| 259 |
+
**Demographics** — `patient_id`, `headache_subtype` (6-class ICHD-3),
|
| 260 |
+
`sex`, `age_at_baseline`, `race_ethnicity`, `education_years`,
|
| 261 |
+
`geographic_region`, `bmi`, `obesity_flag`.
|
| 262 |
+
|
| 263 |
+
**Comorbidities (10 flags)** — anxiety, depression, fibromyalgia,
|
| 264 |
+
sleep_disorder, hypertension, OCP_use, psychiatric_medication, prior_er_visit,
|
| 265 |
+
headache_specialist.
|
| 266 |
+
|
| 267 |
+
**Headache characterization** — `headache_days_per_month`,
|
| 268 |
+
`migraine_days_per_month`, `headache_duration_hours`, `pain_intensity_nrs`
|
| 269 |
+
(0-10), `pain_location`, `pain_character` (Throbbing/Pulsating/Pressing/
|
| 270 |
+
Stabbing), `aggravation_by_activity`, `nausea_flag`, `vomiting_flag`,
|
| 271 |
+
`photophobia_flag`, `phonophobia_flag`, `osmophobia_flag`,
|
| 272 |
+
`allodynia_score_asc12`, `cutaneous_allodynia_flag`,
|
| 273 |
+
`chronification_risk_score`.
|
| 274 |
+
|
| 275 |
+
**Prodrome/aura** — `prodrome_flag`, `prodrome_duration_hours`,
|
| 276 |
+
`prodrome_symptoms`, `aura_flag`, `aura_type`, `aura_duration_minutes`,
|
| 277 |
+
`visual_aura_subtype` ∈ {Scintillating_Scotoma, Fortification_Spectra,
|
| 278 |
+
Blurred_Vision, NaN}, `spreading_depression_proxy`, `postdrome_flag`,
|
| 279 |
+
`postdrome_duration_hours`, `postdrome_symptoms`.
|
| 280 |
+
|
| 281 |
+
**Triggers (13-class)** — stress, sleep_disruption, hormonal,
|
| 282 |
+
weather_barometric, skipped_meals, bright_light, strong_odors,
|
| 283 |
+
dehydration, alcohol, caffeine_withdrawal, dietary_tyramine,
|
| 284 |
+
physical_exertion, screen_time + `n_triggers_reported`,
|
| 285 |
+
`trigger_reliability_score`, `menstrual_cycle_day`,
|
| 286 |
+
`perimenstrual_attack_flag`.
|
| 287 |
+
|
| 288 |
+
**Acute treatment** — `acute_treatment_name` (11 agents),
|
| 289 |
+
`acute_treatment_class` ∈ {NSAID, Triptan, Gepant, Dittan, Ergotamine,
|
| 290 |
+
Analgesic, None}, `acute_dose_mg`, `time_to_treat_hours`,
|
| 291 |
+
`pain_free_2hr_flag`, `pain_relief_2hr_flag`,
|
| 292 |
+
`most_bothersome_symptom_relief`, `sustained_pain_free_24hr`,
|
| 293 |
+
`rescue_medication_flag`, `medication_overuse_days`,
|
| 294 |
+
`medication_overuse_headache_flag`, `treatment_satisfaction_score`.
|
| 295 |
+
|
| 296 |
+
**Preventive treatment** — `preventive_medication` (11 agents),
|
| 297 |
+
`preventive_class` ∈ {BetaBlocker, AED, TCA, CGRP_mAb, CGRP_Gepant,
|
| 298 |
+
Botox, None}, `preventive_dose_mg`, `botox_units`,
|
| 299 |
+
`preventive_duration_months`, `preventive_adherence_pct`,
|
| 300 |
+
`monthly_mmd_reduction`, `responder_50pct_flag`, `responder_75pct_flag`,
|
| 301 |
+
`cgrp_mechanism_flag`, `preventive_discontinuation_flag`,
|
| 302 |
+
`discontinuation_reason`.
|
| 303 |
+
|
| 304 |
+
**Disability/QoL** — `midas_score`, `midas_grade` ∈ {Grade_I (0-5),
|
| 305 |
+
Grade_II (6-10), Grade_III (11-20), Grade_IV (≥21)}, `hit6_score`
|
| 306 |
+
(36-78), `promis_pain_interference_t`, `work_days_lost_per_month`,
|
| 307 |
+
`presenteeism_days_per_month`, `global_productivity_loss_pct`,
|
| 308 |
+
`sf12_pcs`, `sf12_mcs`, `phq9_score` (0-27), `gad7_score` (0-21),
|
| 309 |
+
`psqi_score`, `caregiver_burden_score`, `healthcare_visits_per_year`,
|
| 310 |
+
`annual_migraine_cost_usd`.
|
| 311 |
+
|
| 312 |
+
**Biomarkers** — `plasma_cgrp_pg_ml`, `plasma_cgrp_ictal_flag`,
|
| 313 |
+
`cgrp_response_index`, `plasma_serotonin_ng_ml`, `cortisol_am_ug_dl`,
|
| 314 |
+
`magnesium_serum_mg_dl`, `magnesium_deficiency_flag`,
|
| 315 |
+
`inflammatory_index`, `autonomic_dysfunction_score`.
|
| 316 |
+
|
| 317 |
+
---
|
| 318 |
+
|
| 319 |
+
## Calibration notes & limitations
|
| 320 |
+
|
| 321 |
+
In the spirit of honest synthetic data, a few things buyers of the sample
|
| 322 |
+
should know:
|
| 323 |
+
|
| 324 |
+
1. **Generator bug fix applied: missing `obesity_flag` column.** The
|
| 325 |
+
upstream generator's `generate_comorbidities()` does not create
|
| 326 |
+
`obesity_flag`, but `generate_headache_baseline()` references it.
|
| 327 |
+
The wrapper monkey-patches `generate_comorbidities` to add
|
| 328 |
+
`obesity_flag` with Bigal 2006-calibrated prevalence (CM ~30%,
|
| 329 |
+
EM/TTH ~20%). Underlying generator file unmodified. Without this
|
| 330 |
+
patch, the generator crashes with KeyError.
|
| 331 |
+
|
| 332 |
+
2. **Pain-relief 2hr = 100% and rescue medication = 100% are generator
|
| 333 |
+
quirks.** The upstream `generate_acute_treatment()` module sets
|
| 334 |
+
these flags as constants rather than sampling from the
|
| 335 |
+
`pain_free_2hr` rate dictionary. **Treat the
|
| 336 |
+
`pain_relief_2hr_flag`, `rescue_medication_flag` columns as
|
| 337 |
+
placeholders** until the full product release. The scorecard does
|
| 338 |
+
NOT validate these. For acute treatment efficacy ML, use the
|
| 339 |
+
`acute_treatment_class` field and reference Ferrari 2001 published
|
| 340 |
+
rates externally.
|
| 341 |
+
|
| 342 |
+
3. **CGRP mAb 50% responder = 100% is a generator quirk.** Same root
|
| 343 |
+
cause as above — `responder_50pct_flag` is set deterministically
|
| 344 |
+
rather than sampled from the trial-anchored response rate. STRIVE /
|
| 345 |
+
HALO / EVOLVE / PROMISE-2 trials report 41-62% 50% responder rates
|
| 346 |
+
for CGRP mAbs vs ~25-30% placebo. The scorecard validates
|
| 347 |
+
`monthly_mmd_reduction` (which IS correctly calibrated, M05) as
|
| 348 |
+
the primary CGRP mAb efficacy metric.
|
| 349 |
+
|
| 350 |
+
4. **Anxiety = 100% and depression = 0% are generator quirks.** The
|
| 351 |
+
`rng_bool()` helper uses `np.random.random()` (module-level) while
|
| 352 |
+
the broader codebase passes `rng` for seeded reproducibility. This
|
| 353 |
+
creates inconsistent state. **Do not use the
|
| 354 |
+
`anxiety_disorder_flag` or `depression_flag` columns directly for
|
| 355 |
+
comorbidity prevalence work.** For psychiatric comorbidity ML, use
|
| 356 |
+
the `phq9_score` (continuous, 0-27) and `gad7_score` (continuous,
|
| 357 |
+
0-21) columns instead.
|
| 358 |
+
|
| 359 |
+
5. **Severe HIT-6 (≥60) is 2.8%** vs clinical expectations of 30-50%.
|
| 360 |
+
The HIT-6 distribution in this sample is shifted lower than expected
|
| 361 |
+
for a migraine clinical cohort. For HIT-6 modeling, validate the
|
| 362 |
+
raw distribution before training.
|
| 363 |
+
|
| 364 |
+
6. **Fibromyalgia flag = 0% is a generator quirk.** Same `rng_bool`
|
| 365 |
+
inconsistency. For migraine-fibromyalgia comorbidity ML, the full
|
| 366 |
+
product fixes this.
|
| 367 |
+
|
| 368 |
+
7. **Preventive discontinuation = 0% is unrealistic.** Real-world CGRP
|
| 369 |
+
mAb 1-year discontinuation rates are 30-50% (Hepp 2020, Nahas
|
| 370 |
+
2020). Generator does not model discontinuation; the full product
|
| 371 |
+
does.
|
| 372 |
+
|
| 373 |
+
8. **Plasma CGRP varies bimodally by seed (55 to 96 pg/mL means).**
|
| 374 |
+
The generator's CGRP distribution mixes interictal (~30-50) and
|
| 375 |
+
ictal (~70-110) modes. The scorecard tolerance (35 pg/mL) spans
|
| 376 |
+
both modes; for ictal-only or interictal-only analysis, filter on
|
| 377 |
+
`plasma_cgrp_ictal_flag`.
|
| 378 |
+
|
| 379 |
+
9. **MIDAS grade label is `Grade_I/II/III/IV`** (not the literature
|
| 380 |
+
convention `I_None/II_Mild/III_Moderate/IV_Severe`). Grade IV =
|
| 381 |
+
MIDAS ≥21 = severe disability per ICHD-3.
|
| 382 |
+
|
| 383 |
+
10. **Deterministic seeding.** Wrapper passes user-specified seed
|
| 384 |
+
into `CONFIG["seed"]` and `np.random.seed()`. Seed sweep verifies
|
| 385 |
+
Grade A+ across {42, 7, 123, 2024, 99, 1}.
|
| 386 |
+
|
| 387 |
+
---
|
| 388 |
+
|
| 389 |
+
## Commercial / full product
|
| 390 |
+
|
| 391 |
+
The full **HC-NEU-006** product covers 10,000 patients with calibrated
|
| 392 |
+
CGRP mAb 50% responder rates per STRIVE/HALO/EVOLVE/PROMISE-2 (not
|
| 393 |
+
deterministic 100%), realistic acute-treatment pain-free 2hr response
|
| 394 |
+
sampling per Ferrari 2001 meta-analysis, fixed psychiatric comorbidity
|
| 395 |
+
sampling, preventive discontinuation modeling per Hepp 2020 / Nahas
|
| 396 |
+
2020 real-world data, 24-month monthly diary sub-records for
|
| 397 |
+
longitudinal analysis, configurable cohort enrichment (chronic-only,
|
| 398 |
+
pediatric, cluster headache, MOH, perimenstrual migraine), and
|
| 399 |
+
patient-level outcome modeling. Available under commercial license —
|
| 400 |
+
contact [pradeep@xpertsystems.ai](mailto:pradeep@xpertsystems.ai).
|
| 401 |
+
|
| 402 |
+
XpertSystems.ai also publishes synthetic data products across Oil & Gas
|
| 403 |
+
(17 SKUs), Cybersecurity, Insurance & Risk, and Materials & Energy.
|
| 404 |
+
Catalog: [huggingface.co/xpertsystems](https://huggingface.co/xpertsystems).
|