"""Punctuation-graph-distance features. For each sample, build the per-layer co-attention token graph G_l(t1, t2) = mean over heads of attention from t1 to t2 and treat its row-stochastic dual as a directed weighted graph. We compute the shortest-path "attention distance" from every token t to the nearest punctuation token, where edge weight is w(t1, t2) = -log( max(G_l(t1, t2), eps) ) This is the standard negative-log transformation that turns multiplicative attention chains into additive distances --- the same trick used for attention flow / attention rollout, applied here to discover discourse boundaries via punctuation as anchors. For each layer l, we extract per-sample statistics of {dist(t, punct) : t}: mean, std, min, max, fraction with finite distance, median. We also extract the same statistics for distance to special tokens (CLS = position 0; SEP = last non-padded position) and the cross-layer std of the mean-distance-to-punct trajectory. Pure attention/tokenizer-derived; no class softmax used. """ from __future__ import annotations from pathlib import Path from typing import List, Tuple import numpy as np import torch from scipy.sparse import csr_matrix from scipy.sparse.csgraph import shortest_path from tqdm import tqdm PUNCT_CHARS = set(".,;:!?\"'`()[]{}-—–…") def _punct_token_ids(tokenizer) -> set: out = set() vocab = tokenizer.get_vocab() for tok, idx in vocab.items(): s = tok.replace("##", "").replace("Ġ", "").replace("▁", "") if s and all(c in PUNCT_CHARS for c in s): out.add(idx) return out def _shortest_path_to_set(D: np.ndarray, anchors: np.ndarray) -> np.ndarray: """Dijkstra: for each row return min over anchors of shortest-path distance. D is a (T, T) directed weighted adjacency where row i has the out-edge weights from node i. anchors is a boolean (T,) mask. Returns a (T,) array of distances; np.inf for unreachable. """ sp = shortest_path(csr_matrix(D), directed=True, return_predecessors=False) # sp[i, j] = shortest dist i -> j if anchors.sum() == 0: return np.full(D.shape[0], np.inf, dtype=np.float32) return sp[:, anchors].min(axis=1).astype(np.float32) def _stats(v: np.ndarray) -> np.ndarray: finite = v[np.isfinite(v)] if len(finite) == 0: return np.zeros(6, dtype=np.float32) return np.array([ float(finite.mean()), float(finite.std()), float(finite.min()), float(finite.max()), float(np.median(finite)), float(len(finite) / max(len(v), 1)), ], dtype=np.float32) def _process_one(args): attn_path, punct_mask, T_sample = args with np.load(attn_path, allow_pickle=True) as d: A = np.asarray(d["attn"]).astype(np.float32) T_a = int(d.get("seq_len", A.shape[-1])) A = A[:, :, :T_a, :T_a] L, _, _, _ = A.shape T = min(T_a, T_sample) pmask = punct_mask[:T].astype(bool) if pmask.sum() == 0: # No punctuation: return zeros (matches normal output dim = L*6*2 + 4) return np.zeros(L * 6 * 2 + 4, dtype=np.float32) # CLS = 0, SEP = T - 1 (RoBERTa/ELECTRA convention) cls_mask = np.zeros(T, dtype=bool); cls_mask[0] = True sep_mask = np.zeros(T, dtype=bool); sep_mask[T - 1] = True feats: List[float] = [] dist_means_per_layer = [] for l in range(L): G = A[l].mean(axis=0)[:T, :T] eps = 1e-6 # Edge weight = -log(G); zero G → inf weight (no edge) W = -np.log(np.clip(G, eps, 1.0)) # Zero-out self-loops by setting them to a large finite value (not 0 which means no edge) np.fill_diagonal(W, 0.0) # Compute shortest-path distance from every token to nearest punctuation try: d_punct = _shortest_path_to_set(W, pmask) d_cls = _shortest_path_to_set(W, cls_mask) except Exception: feats.extend([0.0]*12); dist_means_per_layer.append(0.0); continue feats.extend(_stats(d_punct).tolist()) feats.extend(_stats(d_cls).tolist()) # mean dist to punct, used for cross-layer std finite = d_punct[np.isfinite(d_punct)] dist_means_per_layer.append(float(finite.mean()) if len(finite) else 0.0) # Cross-layer std of mean dist-to-punct dl = np.asarray(dist_means_per_layer, dtype=np.float32) cross_std = float(dl.std()) if len(dl) > 0 else 0.0 cross_mean = float(dl.mean()) if len(dl) > 0 else 0.0 cross_min = float(dl.min()) if len(dl) > 0 else 0.0 cross_max = float(dl.max()) if len(dl) > 0 else 0.0 feats.append(cross_std) feats.append(cross_mean) feats.append(cross_min) feats.append(cross_max) return np.array(feats, dtype=np.float32) def compute_punct_dist( attn_dir: Path, tokenizer, model_max_length: int, df, text_col: str, n_workers: int = 1, ) -> Tuple[np.ndarray, List[str]]: """Return per-sample feature matrix (N, 12*L + 4).""" punct_ids = _punct_token_ids(tokenizer) rows = [] iterable = df.reset_index(drop=True) # Layer count from the attention dumps, not assumed to be 12. with np.load(Path(attn_dir) / f"{int(iterable.iloc[0]['idx']):06d}.npz") as _z: L = int(_z["attn"].shape[0]) # Pre-tokenize to get per-sample punctuation masks args_list = [] for i, r in tqdm(iterable.iterrows(), total=len(iterable), desc="punct-dist tokenize"): idx = int(r["idx"]) enc = tokenizer(r[text_col], truncation=True, max_length=model_max_length, padding="max_length", return_tensors="pt") ids = enc["input_ids"][0].tolist() is_punct = np.array([tid in punct_ids for tid in ids], dtype=bool) T_sample = len(ids) args_list.append((attn_dir / f"{idx:06d}.npz", is_punct, T_sample)) if n_workers <= 1: rows = [_process_one(a) for a in tqdm(args_list, desc="punct-dist")] else: from multiprocessing import Pool with Pool(processes=n_workers) as pool: rows = list(tqdm(pool.imap(_process_one, args_list, chunksize=8), total=len(args_list), desc=f"punct-dist[{n_workers}w]")) arr = np.stack(rows, axis=0) cols = [] for l in range(L): for st in ("mean", "std", "min", "max", "median", "finite_frac"): cols.append(f"punctD_d2p_{st}_L{l}") for st in ("mean", "std", "min", "max", "median", "finite_frac"): cols.append(f"punctD_d2c_{st}_L{l}") cols.extend(["punctD_crossL_std", "punctD_crossL_mean", "punctD_crossL_min", "punctD_crossL_max"]) return arr, cols