#!/usr/bin/env python3 """ Reprocess mesh vertices in existing DROID NPZ files. FIXES: 1. Wrist view: Interpolate FIXED 2D mesh based on actual gripper_state values 2. Exterior view: (TODO) May need different camera offsets for OPEN vs CLOSED This script: - Loads existing NPZ files - Recalculates mesh vertices with proper gripper state interpolation - Saves back to NPZ (overwrites mesh_vertices_2d_wrist_fixed) - Keeps all other data unchanged Usage: python reprocess_mesh_vertices.py --start 0 --end 100 # Test on first 100 episodes python reprocess_mesh_vertices.py --all # Reprocess all episodes """ import sys from pathlib import Path sys.path.append(str(Path(__file__).parent.parent)) import argparse import numpy as np from tqdm import tqdm def get_wrist_fixed_mesh_interpolated(gripper_state: float) -> np.ndarray: """ Get wrist mesh vertices with proper gripper state interpolation. IMPORTANT: DROID convention (INVERTED): gripper_state = 0.0 → OPEN (wide finger spacing) gripper_state = 1.0 → CLOSED (narrow finger spacing) Args: gripper_state: float in [0, 1] from action[6] Returns: mesh_2d: [7, 2] array of mesh vertex coordinates """ # Manually annotated keypoints from web annotation tool # Convention: gripper_state 0.0=OPEN, 1.0=CLOSED # OPEN state (gripper_state = 0.0) - wide finger spacing mesh_open = np.array([ [141, 108], # 0: palm base [253, 106], # 1: RIGHT finger tip (far right) [221, 97], # 2: RIGHT finger joint [49, 108], # 3: LEFT finger tip (far left) [86, 101], # 4: LEFT finger joint [195, 141], # 5: right palm interior [95, 138], # 6: left palm interior ], dtype=np.float32) # CLOSED state (gripper_state = 1.0) - narrow finger spacing mesh_closed = np.array([ [190, 102], # 0: palm base (shifted center) [198, 102], # 1: RIGHT finger tip (only 8px from left!) [195, 98], # 2: RIGHT finger joint [186, 104], # 3: LEFT finger tip (only 8px from right!) [188, 100], # 4: LEFT finger joint [195, 141], # 5: right palm interior (same) [95, 138], # 6: left palm interior (same) ], dtype=np.float32) # Linear interpolation: 0.0 (OPEN) → 1.0 (CLOSED) # mesh = (1 - gripper_state) * mesh_open + gripper_state * mesh_closed alpha = np.clip(gripper_state, 0.0, 1.0) mesh_interpolated = (1.0 - alpha) * mesh_open + alpha * mesh_closed return mesh_interpolated def reprocess_episode(npz_path: Path, dry_run: bool = False) -> dict: """ Reprocess mesh vertices for a single episode. Args: npz_path: Path to NPZ file dry_run: If True, don't save changes Returns: dict with statistics """ data = np.load(npz_path, allow_pickle=True) # Load actions actions = data['actions'] # [T, 7] gripper_states = actions[:, 6] # [T] T = len(actions) # Load existing mesh data (we'll only modify wrist mesh for now) mesh_vertices_2d_exterior = data['mesh_vertices_2d_exterior'] # [T, 7, 2] mesh_vertices_vis_exterior = data['mesh_vertices_vis_exterior'] # [T, 7] mesh_vertices_2d_wrist_old = data['mesh_vertices_2d_wrist_fixed'] # [T, 7, 2] mesh_vertices_vis_wrist = data['mesh_vertices_vis_wrist_fixed'] # [T, 7] # Recompute wrist mesh with interpolation mesh_vertices_2d_wrist_new = np.zeros((T, 7, 2), dtype=np.float32) for t in range(T): mesh_vertices_2d_wrist_new[t] = get_wrist_fixed_mesh_interpolated(gripper_states[t]) # Calculate how much changed max_change = np.abs(mesh_vertices_2d_wrist_new - mesh_vertices_2d_wrist_old).max() mean_change = np.abs(mesh_vertices_2d_wrist_new - mesh_vertices_2d_wrist_old).mean() # Calculate finger spread before and after def calc_finger_spread(mesh_2d, vis): spreads = [] for t in range(len(mesh_2d)): if vis[t, 1] and vis[t, 3]: # Both finger tips visible spread = np.linalg.norm(mesh_2d[t, 1] - mesh_2d[t, 3]) spreads.append(spread) return np.array(spreads) spread_old = calc_finger_spread(mesh_vertices_2d_wrist_old, mesh_vertices_vis_wrist) spread_new = calc_finger_spread(mesh_vertices_2d_wrist_new, mesh_vertices_vis_wrist) stats = { 'npz_path': npz_path.name, 'frames': T, 'gripper_min': gripper_states.min(), 'gripper_max': gripper_states.max(), 'gripper_mean': gripper_states.mean(), 'max_change': max_change, 'mean_change': mean_change, 'spread_old_min': spread_old.min() if len(spread_old) > 0 else np.nan, 'spread_old_max': spread_old.max() if len(spread_old) > 0 else np.nan, 'spread_new_min': spread_new.min() if len(spread_new) > 0 else np.nan, 'spread_new_max': spread_new.max() if len(spread_new) > 0 else np.nan, } # Save if not dry run if not dry_run: # Create new NPZ with updated wrist mesh # Load all arrays from original NPZ new_data = {key: data[key] for key in data.keys()} # Replace wrist mesh new_data['mesh_vertices_2d_wrist_fixed'] = mesh_vertices_2d_wrist_new # Save atomically (write to temp file, then rename) temp_path = npz_path.with_suffix('.npz.tmp') np.savez_compressed(temp_path, **new_data) temp_path.replace(npz_path) data.close() return stats def main(): parser = argparse.ArgumentParser(description='Reprocess mesh vertices in DROID NPZ files') parser.add_argument('--data-dir', type=str, default='/mnt/kevin/data/droid_preprocessed/data', help='Directory containing NPZ files') parser.add_argument('--start', type=int, default=None, help='Start episode index') parser.add_argument('--end', type=int, default=None, help='End episode index (exclusive)') parser.add_argument('--all', action='store_true', help='Process all episodes') parser.add_argument('--dry-run', action='store_true', help='Test without saving changes') parser.add_argument('--visualize', type=int, default=0, help='Number of episodes to visualize for verification') args = parser.parse_args() data_path = Path(args.data_dir) if not data_path.exists(): print(f"Error: Data directory not found: {data_path}") return # Get episode files episode_files = sorted(list(data_path.glob("episode_*.npz"))) print(f"Found {len(episode_files)} episodes in {data_path}") # Determine range if args.all: start_idx = 0 end_idx = len(episode_files) else: start_idx = args.start if args.start is not None else 0 end_idx = args.end if args.end is not None else min(start_idx + 100, len(episode_files)) episodes_to_process = episode_files[start_idx:end_idx] print(f"\nProcessing episodes {start_idx} to {end_idx-1} ({len(episodes_to_process)} total)") if args.dry_run: print("DRY RUN MODE - no changes will be saved") # Process episodes all_stats = [] for npz_path in tqdm(episodes_to_process, desc="Reprocessing"): try: stats = reprocess_episode(npz_path, dry_run=args.dry_run) all_stats.append(stats) except Exception as e: print(f"\nError processing {npz_path.name}: {e}") continue # Print summary print("\n" + "=" * 80) print("Reprocessing Summary") print("=" * 80) print(f"Episodes processed: {len(all_stats)}") if len(all_stats) > 0: max_changes = [s['max_change'] for s in all_stats] mean_changes = [s['mean_change'] for s in all_stats] print(f"\nMesh vertex changes:") print(f" Max change per episode: {np.max(max_changes):.2f} pixels") print(f" Mean change per episode: {np.mean(mean_changes):.2f} pixels") print(f" Median change per episode: {np.median(mean_changes):.2f} pixels") # Show episodes with biggest changes sorted_by_change = sorted(all_stats, key=lambda x: x['max_change'], reverse=True) print(f"\nTop 5 episodes with biggest changes:") for i, s in enumerate(sorted_by_change[:5]): print(f" {i+1}. {s['npz_path']}: max_change={s['max_change']:.2f}px, " f"gripper_range=[{s['gripper_min']:.3f}, {s['gripper_max']:.3f}]") # Finger spread statistics spread_old_min = np.nanmin([s['spread_old_min'] for s in all_stats]) spread_old_max = np.nanmax([s['spread_old_max'] for s in all_stats]) spread_new_min = np.nanmin([s['spread_new_min'] for s in all_stats]) spread_new_max = np.nanmax([s['spread_new_max'] for s in all_stats]) print(f"\nFinger spread (wrist view):") print(f" OLD (fixed): [{spread_old_min:.1f}, {spread_old_max:.1f}] pixels") print(f" NEW (interpolated): [{spread_new_min:.1f}, {spread_new_max:.1f}] pixels") print("=" * 80) if args.dry_run: print("\n⚠ DRY RUN - No changes were saved!") print("Remove --dry-run flag to actually update the NPZ files.") else: print(f"\n✓ Successfully updated {len(all_stats)} episodes") print(f" NPZ files in: {data_path}") # TODO: Add visualization if requested if args.visualize > 0: print(f"\n⚠ Visualization not implemented yet") print(f" Use visualize_gripper_mesh_alignment.py to check results") if __name__ == "__main__": main()