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Upload true_scfv_var_s1_sequences.json with huggingface_hub

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  1. true_scfv_var_s1_sequences.json +17 -0
true_scfv_var_s1_sequences.json ADDED
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+ {
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+ "candidate_id": "var_s1",
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+ "parent_id": "WT_SCFV",
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+ "representation": "true_scfv",
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+ "chain_B_scfv": "EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGNTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVHTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK",
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+ "chain_C_HER2_ECD": "TQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQDIQEVQGYVLIAHNQVRQVPLQRLRIVRGTQLFEDNYALAVLDNGDPLSPGGLRELQLRSLTEILKGGVLIQRNPQLCYQDTILWKDIFHKNNQLALTLIDTNRSRACHPCSPMCKGSRCWGESSEDCQSLTRTVCAGGCARCKGPLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPALVTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVGSCTLVCPLHNQEVTATQRCEKCSKPCARVCYGLGMEHLREVRAVTSANIQEFAGCKKIFGSLAFLPESFDSNTAPLQPEQLQVFETLEEITGYLYISAWPDSLPDLSVFQNLQVIRGRILHNGAYSLTLQGLGISWLGLRSLRELGSGLALIHHNTHLCFVHTVPWDQLFRNPHQALLHTANRPEDECVGEGLACHQLCARGHCWGPGPTQCVNCSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQNGSVTCFGPEADQCVACAHYKDPPFCVARCPSIWKFPDEEGACQPCPIN",
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+ "linker_sequence": "GGGGSGGGGSGGGGS",
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+ "mutations_vs_wt": ["B:57 Y->N", "A:30 N->H"],
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+ "mutations_vs_d70": [],
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+ "scfv_aware_remap_splitter_required": true,
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+ "linker_aware_contact_mask_required": true,
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+ "source": "ProteinMPNN true scFv A30/B57 variation smoke (job 6a50b64d6d2b10c09d677a7b), sample 1",
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+ "validation_status": "UNVALIDATED_PENDING_BOLTZ2",
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+ "downstream_validation_required": true,
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+ "allowed_archive_update": false,
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+ "note": "ProteinMPNN-designed true scFv candidate; VH-(G4S)3-VL; 242 aa; linker intact; A30/B57 allowed mutations only; UNVALIDATED until Boltz2 + HER2 remap + scFv split + linker mask + C:591 + interface-quality validation passes"
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+ }