File size: 14,135 Bytes
e290a7d |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 |
import time
import matplotlib as mpl
mpl.use('Agg')
import numpy as np
import torch
import torch.nn.parallel
import torch.optim
from torch.autograd import Variable
from torch.cuda.amp import autocast as autocast
from model.model_sbert_gref import *
from dataset.data_loader import *
from utils.losses import *
from utils.parsing_metrics import *
from utils.utils import *
from utils.utils import dice_loss, sigmoid_focal_loss
use_cuda = torch.cuda.is_available()
print("use_cuda, ", use_cuda)
def return_mask(emb_distance, verb_mask=None, rows_to_filter=None, cols_to_filter=None):
B_, B_ = emb_distance.shape
positive_mask = torch.zeros_like(emb_distance)
positive_mask.fill_diagonal_(1) # Set diagonal elements to 1 for all cases
if B_ < len(verb_mask):
# If B_ equals to 2*K (double the number of verb phrase)
for i in range(B_ // 2):
positive_mask[2 * i, 2 * i + 1] = 1
positive_mask[2 * i + 1, 2 * i] = 1
else:
# Process the case where we have a mix of sentences with and without verbs
i = 0
while i < B_:
if verb_mask[i] == 1:
positive_mask[i, i + 1] = 1
positive_mask[i + 1, i] = 1
i += 2
else:
i += 1
negative_mask = torch.ones_like(emb_distance) - positive_mask
negative_mask = negative_mask.clone()
if rows_to_filter is not None and cols_to_filter is not None :
for row, col in zip(rows_to_filter, cols_to_filter):
negative_mask[row * 2, col * 2] = 0
negative_mask[row * 2, col * 2 + 1] = 0
negative_mask[row * 2 + 1, col * 2] = 0
negative_mask[row * 2 + 1, col * 2 + 1] = 0
return positive_mask, negative_mask
def UniAngularLogitContrastLoss(total_fq, verb_mask, rows_to_filter, cols_to_filter, alpha=0.5, verbonly=True, m=0.5, tau=0.05, args=None):
_, C, H, W = total_fq.shape
# Calculate embeddings
if verbonly :
B = total_fq[verb_mask].shape[0]
emb = torch.mean(total_fq[verb_mask], dim=(-1, -2)).reshape(B, C)
assert emb.shape[0] % 2 == 0, f"Embedding count {emb.shape[0]} is not divisible by 2."
else :
emb = torch.mean(total_fq, dim=-1)
B_ = emb.shape[0]
emb_i = emb.unsqueeze(1).repeat(1, B_, 1) # (B_, B_, C)
emb_j = emb.unsqueeze(0).repeat(B_, 1, 1) # (B_, B_, C)
sim = nn.CosineSimilarity(dim=-1, eps=1e-6)
sim_matrix = sim(emb_i, emb_j).reshape(B_, B_) # (B_, B_)
sim_matrix = torch.clamp(sim_matrix, min=-0.9999, max=0.9999)
margin_in_radians = m / 57.2958 # Convert degrees to radians
theta_matrix = (torch.pi / 2) - torch.acos(sim_matrix)
# print("sim_matrix : ", sim_matrix)
# print("theta_matrix : ", theta_matrix)
positive_mask, negative_mask = return_mask(sim_matrix, verb_mask, rows_to_filter, cols_to_filter)
# print("positive_mask : ", positive_mask)
# print("negative_mask : ", negative_mask)
# print("positive_mask requires_grad:", positive_mask.requires_grad,
# "device:", positive_mask.device, "dtype:", positive_mask.dtype)
# print("negative_mask requires_grad:", negative_mask.requires_grad,
# "device:", negative_mask.device, "dtype:", negative_mask.dtype)
theta_with_margin = theta_matrix.clone()
theta_with_margin[positive_mask.bool()] -= margin_in_radians
logits = theta_with_margin / tau # Scale with temperature
# Compute exp logits for softmax
exp_logits = torch.exp(logits)
pos_exp_logits = exp_logits * positive_mask
pos_exp_logits = pos_exp_logits.sum(dim=-1)
neg_exp_logits = exp_logits * negative_mask
neg_exp_logits = neg_exp_logits.sum(dim=-1)
total_exp_logits = pos_exp_logits + neg_exp_logits
positive_loss = -torch.log(pos_exp_logits/ total_exp_logits)
angular_loss = positive_loss.mean()
# print("angular_loss : ", angular_loss)
return angular_loss, B_
def train_epoch(rank, args, train_loader, model, optimizer, epoch, scaler, logger):
print('train at epoch %d'%epoch)
batch_time = AverageMeter()
losses = AverageMeter()
dice_losses = AverageMeter()
sigmoid_focal_losses = AverageMeter()
cos_losses = AverageMeter()
model.train()
end = time.time()
# argument for verb-centric radial contrastive loss
mlw = args.metric_loss_weight
metric_mode = args.metric_mode
filter_thres = args.filter_thres
metric_learning = args.metric_learning
for batch_idx, (imgs, word_id, word_mask, bbox, seg_map, params) in enumerate(train_loader):
B = imgs.size(0) # Original Batch size
hp_word_id = params['hp_word_id']
hp_word_mask = params['hp_word_mask']
hp_bert_embs = params['hardpos_emb'].cuda(non_blocking=True).squeeze(1)
pos_type = np.array(params['pos_type'])
pos_mask = torch.tensor(np.where(pos_type == 'hardpos', 1, 0))
# print(hp_bert_embs.shape)
# print(imgs.shape, word_id.shape, word_mask.shape, seg_map.shape)
# hardpos flag outside the model
verb_masks = []
cl_masks = []
images = []
targets = []
sentences_ = []
sentences_masked_ = []
for idx in range(len(imgs)) :
sentences_.append(word_id[idx])
sentences_masked_.append(word_mask[idx])
images.append(imgs[idx])
targets.append(seg_map[idx])
# If verb exists, process it
if pos_mask[idx] :
verb_masks.extend([1, 1]) # Both original sentence and verb are marked
cl_masks.extend([1, 0]) # Only original sentence get marked
sentences_.append(hp_word_id[idx])
sentences_masked_.append(hp_word_mask[idx])
images.append(imgs[idx])
targets.append(seg_map[idx])
else:
verb_masks.append(0)
cl_masks.append(1)
imgs, seg_map, word_id, word_mask, verb_masks, cl_masks = \
torch.stack(images).cuda(rank, non_blocking=True),\
torch.stack(targets).cuda(rank, non_blocking=True),\
torch.stack(sentences_).cuda(rank, non_blocking=True),\
torch.stack(sentences_masked_).cuda(rank, non_blocking=True),\
torch.tensor(verb_masks, dtype=torch.bool).cuda(rank, non_blocking=True),\
torch.tensor(cl_masks, dtype=torch.bool).cuda(rank, non_blocking=True)
image = Variable(imgs)
word_id = Variable(word_id)
word_mask = Variable(word_mask)
seg_map = Variable(seg_map)
verb_masks = Variable(verb_masks)
cl_masks = Variable(cl_masks)
if hp_bert_embs.numel() > 0 :
mask = ~torch.all(hp_bert_embs == 0, dim=1)
hp_bert_embs = hp_bert_embs[mask]
# print(hp_bert_embs.shape, hp_bert_embs.requires_grad, hp_bert_embs.device)
norms = torch.norm(hp_bert_embs, dim=-1, keepdim=True)
normed_embs = hp_bert_embs / norms
cosime_sim = torch.mm(normed_embs, normed_embs.T)
rows_to_filter, cols_to_filter = torch.where(cosime_sim > filter_thres)
# print(normed_embs, normed_embs.requires_grad, normed_embs.device)
# print(cosime_sim, cosime_sim.requires_grad, cosime_sim.device)
# print("rows_to_filter : ", rows_to_filter, rows_to_filter.requires_grad)
# print("cols_to_filter : ", cols_to_filter, cols_to_filter.requires_grad)
with autocast():
mask_out_all, metric_tensors = model(image, word_id, word_mask)
loss = 0.
# get mask and seg_map for calculating existing loss function (iou loss, dice loss, sigmoid focal loss)
mask_out = mask_out_all[cl_masks]
seg_map_cl = seg_map[cl_masks]
mask_out_np = mask_out.data.cpu().numpy() # [bs, 1, 208, 208]
seg_map_np = seg_map_cl.cpu().numpy() # [bs, 1, 208, 208]
seg_iou = cal_seg_iou_loss(seg_map_np, mask_out_np, args.seg_thresh)
dice_loss_ = dice_loss(mask_out, seg_map_cl)
sigmoid_focal_loss_ = sigmoid_focal_loss(mask_out, seg_map_cl)
dice_weight, focal_weight = 1.0, 1.0
loss = (dice_weight * dice_loss_) + (focal_weight * sigmoid_focal_loss_)
# get angular contrastive loss, which involves original & verb pharase pairs (only for pairs where hardpos verb phrase exists)
if metric_learning and sum(pos_mask) > 1 :
metric_weight = mlw
# NS means number of orig-verb pair where verb phrase exists.
metric_loss, NS = UniAngularLogitContrastLoss(metric_tensors, verb_masks, rows_to_filter, cols_to_filter, m=args.margin_value, tau=args.temperature, verbonly=True, args=args)
loss += metric_weight * metric_loss
optimizer.zero_grad()
scaler.scale(loss).backward()
scaler.step(optimizer)
scaler.update()
losses.update(loss.item(), B)
dice_losses.update(dice_loss_.item(), B)
sigmoid_focal_losses.update(sigmoid_focal_loss_.item(), B)
cos_losses.update(seg_iou.mean().item(), B)
# measure elapsed time
batch_time.update(time.time() - end)
end = time.time()
if rank == 0 and batch_idx % args.print_freq == 0:
print_str = 'Epoch: [{0}][{1}/{2}]\t' \
'Time {batch_time.val:.3f} ({batch_time.avg:.3f})\t' \
'Loss {loss.val:.4f} ({loss.avg:.4f})\t' \
'dice_losses {dice_losses.val:.4f} ({dice_losses.avg:.4f})\t' \
'sigmoid_focal_losses {sigmoid_focal_losses.val:.4f} ({sigmoid_focal_losses.avg:.4f})\t' \
'IoU {cos_loss.val:.4f} ({cos_loss.avg:.4f})\t' \
.format(epoch, batch_idx, len(train_loader), batch_time=batch_time, loss=losses, dice_losses=dice_losses, sigmoid_focal_losses=sigmoid_focal_losses, cos_loss=cos_losses)
print(print_str)
logger.info(print_str)
return losses.avg
def validate_epoch(args, val_loader, model, logger, mode='val'):
print('begin test')
batch_time = AverageMeter()
miou = AverageMeter()
miou_seg = AverageMeter()
prec=dict()
thresholds = np.arange(0.5, 1, 0.05)
for thresh in thresholds:
prec[thresh]= AverageMeter()
model.eval()
end = time.time()
idx = 0
t_all = []
total_intersection = 0.0
total_union = 0.0
for batch_idx, (imgs, word_id, word_mask, bbox, seg_map, ratio, dw, dh, im_id, phrase, draw_img) in enumerate(val_loader):
imgs = imgs.cuda(0)
word_id = word_id.cuda(0)
word_mask = word_mask.cuda(0)
seg_map = seg_map.cuda(0)
image = Variable(imgs)
word_id = Variable(word_id)
word_mask = Variable(word_mask)
seg_map = Variable(seg_map)
t1 = time.time()
with torch.no_grad():
mask_out, _ = model(image, word_id, word_mask)
mask_out = mask_out.sigmoid()
t2 = time.time()
t_all.append(t2-t1)
## test: convert pred, gt box to original scale with meta-info
ih = seg_map.shape[-2]
iw = seg_map.shape[-1]
nh = int(ih * ratio)
nw = int(iw * ratio)
top, bottom = int(dh[0]), nh + int(dh[0])
left, right = int(dw[0]), nw + int(dw[0])
ratio = float(ratio)
new_shape = (iw, ih)
## revert image for visualization
seg_map_np = seg_map[0,:,:,:].data.cpu().numpy().transpose(1,2,0)
seg_map_np = cv2.resize(seg_map_np, new_shape, interpolation=cv2.INTER_CUBIC)
img_np = imgs[0,:,top:bottom,left:right].data.cpu().numpy().transpose(1,2,0)
img_np = cv2.resize(img_np, new_shape, interpolation=cv2.INTER_CUBIC)
img_np = Variable(torch.from_numpy(img_np.transpose(2,0,1)).cuda().unsqueeze(0))
# seg
mask_out = mask_out[0].data.cpu().numpy().transpose(1,2,0)
mask_out = cv2.resize(mask_out, (args.size, args.size))
mask_out_np = mask_out[top:bottom, left:right]
mask_out_np = cv2.resize(mask_out_np, new_shape)
# seg_iou, seg_prec = cal_seg_iou(seg_map[0].cpu().numpy(), mask_out_np, args.seg_thresh)
seg_iou, seg_prec, inter_sum, union_sum = cal_seg_iou2(seg_map_np, mask_out_np, args.seg_thresh)
miou_seg.update(seg_iou, imgs.size(0))
total_intersection += inter_sum
total_union += union_sum
for thresh in thresholds:
prec[thresh].update(seg_prec[thresh], imgs.size(0))
# measure elapsed time
batch_time.update(time.time() - end)
end = time.time()
if batch_idx % 1000 == 0:
print_str = '[{0}/{1}]\t' \
'Time {batch_time.val:.3f} ({batch_time.avg:.3f})\t' \
'seg_iu {seg.val:.4f} ({seg.avg:.4f})\t' \
.format( \
batch_idx, len(val_loader), batch_time=batch_time, seg=miou_seg)
print(print_str)
logger.info(print_str)
idx = idx + 1
overall_iou = (total_intersection + 1e-10) / (total_union + 1e-10)
print("Mean IoU:", miou_seg.avg)
print("Overall IoU:", overall_iou)
logger.info("Mean IoU: %.4f" % miou_seg.avg)
logger.info("Overall IoU: %.4f" % overall_iou)
for thresh in thresholds:
print("prec@%f: %f"%(thresh,float(prec[thresh].avg)))
logger.info("prec@%f:%f"%(thresh,float(prec[thresh].avg)))
# logger.info("%f,%f"%(float(miou.avg), miou_seg.avg))
return miou_seg.avg, prec
|