Upload TextClassificationPipeline
Browse files- config.json +9 -778
- model.safetensors +2 -2
config.json
CHANGED
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@@ -1,5 +1,5 @@
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{
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"_name_or_path": "/groups/pupko/edodotan/PretrainAccelerator/validators/
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"architectures": [
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"EsmForSequenceClassification"
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],
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@@ -11,787 +11,19 @@
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"hidden_dropout_prob": 0.0,
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"hidden_size": 640,
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"id2label": {
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"0": "
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"1": "
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"2": "
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"3": "
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"4": "acrosome lumen",
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"5": "acrosome membrane",
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| 20 |
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"6": "actin patch",
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| 21 |
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"7": "adherens junction",
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"8": "aleurone grain",
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"9": "aleurone grain membrane",
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"10": "amyloplast",
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"11": "amyloplast membrane",
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"12": "anammoxosome",
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"13": "apical cell membrane",
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"14": "apicolateral cell membrane",
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"15": "apicoplast",
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"16": "apoplast",
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"17": "archaeal flagellum",
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"18": "ascus epiplasm",
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"19": "attachment organelle",
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"20": "attachment organelle membrane",
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"21": "autolysosome membrane",
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"22": "autophagosome",
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"23": "autophagosome membrane",
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"24": "axon",
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"25": "bacterial flagellum",
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"26": "bacterial flagellum basal body",
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"27": "bacterial microcompartment",
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"28": "basal cell membrane",
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"29": "basement membrane",
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"30": "basolateral cell membrane",
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"31": "bud",
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"32": "bud membrane",
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"33": "bud neck",
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"34": "bud tip",
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"35": "cajal body",
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"36": "calyx",
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"37": "capsule",
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"38": "carboxysome",
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"39": "caveola",
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"40": "cell cortex",
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"41": "cell envelope",
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"42": "cell inner membrane",
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"43": "cell junction",
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"44": "cell membrane",
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"45": "cell outer membrane",
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"46": "cell projection",
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"47": "cell septum",
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"48": "cell surface",
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"49": "cell tip",
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"50": "cellular chromatophore membrane",
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"51": "cellular thylakoid lumen",
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"52": "cellular thylakoid membrane",
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"53": "cell wall",
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"54": "centriolar satellite",
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"55": "centriole",
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"56": "centromere",
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"57": "centrosome",
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"58": "chloroplast",
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"59": "chloroplast envelope",
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"60": "chloroplast inner membrane",
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"61": "chloroplast intermembrane space",
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"62": "chloroplast membrane",
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"63": "chloroplast nucleoid",
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"64": "chloroplast outer membrane",
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"65": "chloroplast stroma",
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"66": "chloroplast thylakoid",
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"67": "chloroplast thylakoid lumen",
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"68": "chloroplast thylakoid membrane",
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"69": "chlorosome",
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"70": "chlorosome envelope",
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"71": "chromaffin granule",
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"72": "chromaffin granule lumen",
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"73": "chromaffin granule membrane",
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"74": "chromoplast",
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"75": "chromoplast stroma",
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"76": "chromosome",
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"77": "cilium",
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"78": "cilium axoneme",
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"79": "cilium basal body",
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"80": "cilium membrane",
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"81": "cis-golgi network",
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"82": "cis-golgi network membrane",
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"83": "clathrin-coated pit",
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"84": "clathrin-coated vesicle",
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"85": "clathrin-coated vesicle membrane",
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"86": "cleavage furrow",
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"87": "coated pit",
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"88": "contractile vacuole",
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"89": "contractile vacuole membrane",
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"90": "copi-coated vesicle",
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"91": "copi-coated vesicle membrane",
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"92": "copii-coated vesicle",
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"93": "copii-coated vesicle membrane",
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"94": "cortical granule",
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"95": "cvt vesicle membrane",
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"96": "cyanelle",
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"97": "cyanelle stroma",
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"98": "cyanelle thylakoid lumen",
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"99": "cyanelle thylakoid membrane",
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"100": "cytolytic granule",
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"101": "cytoplasm",
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"102": "cytoplasmic granule",
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"103": "cytoplasmic granule lumen",
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"104": "cytoplasmic granule membrane",
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"105": "cytoplasmic ribonucleoprotein granule",
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"106": "cytoplasmic vesicle",
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"107": "cytoplasmic vesicle lumen",
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"108": "cytoplasmic vesicle membrane",
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"109": "cytoskeleton",
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"110": "cytosol",
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"111": "dendrite",
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"112": "dendritic spine",
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"113": "dendritic spine membrane",
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"114": "desmosome",
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"115": "dynein axonemal particle",
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"116": "early endosome",
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"117": "early endosome membrane",
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"118": "encapsulin nanocompartment",
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"119": "endomembrane system",
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"120": "endoplasmic reticulum",
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"121": "endoplasmic reticulum-golgi intermediate compartment",
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"122": "endoplasmic reticulum-golgi intermediate compartment membrane",
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"123": "endoplasmic reticulum lumen",
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"124": "endoplasmic reticulum membrane",
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"125": "endosome",
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"126": "endosome membrane",
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"127": "etioplast membrane",
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"128": "extracellular exosome",
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"129": "extracellular matrix",
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"130": "extracellular space",
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"131": "extracellular vesicle",
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"132": "extracellular vesicle membrane",
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"133": "filopodium",
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"134": "filopodium membrane",
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"135": "fimbrium",
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"136": "flagellar pocket",
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"137": "flagellum",
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"138": "flagellum axoneme",
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"139": "flagellum basal body",
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"140": "flagellum membrane",
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"141": "focal adhesion",
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"142": "forespore",
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"143": "forespore inner membrane",
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"144": "forespore intermembrane space",
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"145": "forespore membrane",
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"146": "forespore outer membrane",
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"147": "gap junction",
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"148": "gas vesicle",
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"149": "gas vesicle shell",
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"150": "gem",
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"151": "glycosome",
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"152": "glyoxysome",
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"153": "glyoxysome membrane",
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"154": "golgi apparatus",
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"155": "golgi apparatus lumen",
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"156": "golgi apparatus membrane",
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"157": "golgi outpost",
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"158": "golgi stack",
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"159": "golgi stack membrane",
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"160": "growth cone",
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"161": "hemidesmosome",
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"162": "host cell inner membrane",
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"163": "host cell junction",
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"164": "host cell membrane",
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"165": "host cell outer membrane",
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"166": "host cell surface",
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"167": "host cellular thylakoid membrane",
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"168": "host cell wall",
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"169": "host chloroplast envelope",
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"170": "host cytoplasm",
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"171": "host cytoplasmic vesicle",
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"172": "host cytoplasmic vesicle membrane",
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"173": "host cytoskeleton",
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"174": "host cytosol",
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"175": "host endoplasmic reticulum",
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"176": "host endoplasmic reticulum-golgi intermediate compartment",
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"177": "host endoplasmic reticulum lumen",
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"178": "host endoplasmic reticulum membrane",
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"179": "host endosome",
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"180": "host golgi apparatus",
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"181": "host golgi apparatus membrane",
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"182": "host membrane",
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"183": "host mitochondrion",
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"184": "host mitochondrion inner membrane",
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"185": "host mitochondrion membrane",
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"186": "host mitochondrion outer membrane",
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"187": "host multivesicular body",
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"188": "host nucleolus",
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"189": "host nucleoplasm",
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"190": "host nucleus",
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"191": "host nucleus envelope",
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"192": "host nucleus inner membrane",
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"193": "host nucleus matrix",
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"194": "host nucleus membrane",
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"195": "host perinuclear region",
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"196": "host periplasm",
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"197": "host plasmodesma",
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"198": "host rough endoplasmic reticulum",
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"199": "host rough endoplasmic reticulum membrane",
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"200": "hydrogenosome",
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"201": "hydrogenosome lumen",
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"202": "i band",
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"203": "inflammasome",
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"204": "inner membrane complex",
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"205": "interphotoreceptor matrix",
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"206": "invadopodium membrane",
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"207": "kinetochore",
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"208": "kinetoplast",
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"209": "lamellipodium",
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"210": "lamellipodium membrane",
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"211": "late endosome",
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"212": "late endosome lumen",
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"213": "late endosome membrane",
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"214": "lateral cell membrane",
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"215": "lipid droplet",
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"216": "lysosome",
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"217": "lysosome lumen",
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"218": "lysosome membrane",
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"219": "lytic vacuole",
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"220": "magnetosome",
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"221": "magnetosome membrane",
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"222": "melanosome",
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"223": "melanosome lumen",
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| 238 |
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"224": "melanosome membrane",
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"225": "membrane",
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"226": "membrane raft",
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"227": "microneme",
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"228": "microneme membrane",
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"229": "microsome",
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| 244 |
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"230": "microsome membrane",
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| 245 |
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"231": "microtubule organizing center",
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"232": "microvillus",
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"233": "microvillus membrane",
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"234": "midbody",
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"235": "midbody ring",
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"236": "mitochondrion",
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"237": "mitochondrion envelope",
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| 252 |
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"238": "mitochondrion inner membrane",
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"239": "mitochondrion intermembrane space",
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| 254 |
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"240": "mitochondrion matrix",
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| 255 |
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"241": "mitochondrion membrane",
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| 256 |
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"242": "mitochondrion nucleoid",
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| 257 |
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"243": "mitochondrion outer membrane",
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| 258 |
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"244": "mitosome",
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| 259 |
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"245": "mitosome matrix",
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| 260 |
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"246": "mitosome membrane",
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| 261 |
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"247": "m line",
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| 262 |
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"248": "multivesicular body",
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| 263 |
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"249": "multivesicular body membrane",
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| 264 |
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"250": "myelin membrane",
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| 265 |
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"251": "myofibril",
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| 266 |
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"252": "nematocyst",
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"253": "neuronal dense core vesicle membrane",
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| 268 |
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"254": "neuron projection",
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| 269 |
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"255": "nuclear body",
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"256": "nuclear pore complex",
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| 271 |
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"257": "nucleoid",
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| 272 |
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"258": "nucleolus",
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| 273 |
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"259": "nucleoplasm",
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| 274 |
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"260": "nucleus",
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| 275 |
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"261": "nucleus envelope",
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| 276 |
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"262": "nucleus inner membrane",
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| 277 |
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"263": "nucleus lamina",
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| 278 |
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"264": "nucleus matrix",
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| 279 |
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"265": "nucleus membrane",
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| 280 |
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"266": "nucleus outer membrane",
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| 281 |
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"267": "nucleus speckle",
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| 282 |
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"268": "organellar chromatophore",
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| 283 |
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"269": "organellar chromatophore thylakoid membrane",
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| 284 |
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"270": "parasitophorous vacuole",
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| 285 |
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"271": "parasitophorous vacuole lumen",
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| 286 |
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"272": "parasitophorous vacuole membrane",
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| 287 |
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"273": "p-body",
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| 288 |
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"274": "peribacteroid membrane",
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| 289 |
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"275": "peribacteroid space",
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| 290 |
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"276": "perikaryon",
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| 291 |
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"277": "perinuclear region",
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| 292 |
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"278": "perinuclear theca",
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| 293 |
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"279": "periplasm",
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| 294 |
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"280": "periplasmic flagellum",
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| 295 |
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"281": "perispore",
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| 296 |
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"282": "peroxisome",
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| 297 |
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"283": "peroxisome matrix",
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| 298 |
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"284": "peroxisome membrane",
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| 299 |
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"285": "phagocytic cup",
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| 300 |
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"286": "phagosome",
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| 301 |
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"287": "phagosome membrane",
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| 302 |
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"288": "photoreceptor inner segment",
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| 303 |
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"289": "photoreceptor inner segment membrane",
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| 304 |
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"290": "photoreceptor outer segment",
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| 305 |
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"291": "photoreceptor outer segment membrane",
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| 306 |
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"292": "phragmoplast",
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| 307 |
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"293": "plasmodesma",
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| 308 |
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"294": "plastid",
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| 309 |
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"295": "plastid inner membrane",
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| 310 |
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"296": "plastid membrane",
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| 311 |
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"297": "plastid outer membrane",
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| 312 |
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"298": "plastid stroma",
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| 313 |
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"299": "plastid thylakoid membrane",
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| 314 |
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"300": "plastoglobule",
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| 315 |
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"301": "pml body",
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| 316 |
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"302": "podosome",
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| 317 |
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"303": "pollen coat",
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| 318 |
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"304": "postsynapse",
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| 319 |
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"305": "postsynaptic cell membrane",
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| 320 |
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"306": "postsynaptic density",
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| 321 |
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"307": "postsynaptic density membrane",
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| 322 |
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"308": "postsynaptic recycling endosome membrane",
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| 323 |
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"309": "preautophagosomal structure",
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| 324 |
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"310": "preautophagosomal structure membrane",
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| 325 |
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"311": "presynapse",
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| 326 |
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"312": "presynaptic active zone",
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| 327 |
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"313": "presynaptic cell membrane",
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| 328 |
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"314": "prevacuolar compartment",
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| 329 |
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"315": "prevacuolar compartment membrane",
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| 330 |
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"316": "primary cell wall",
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| 331 |
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"317": "prospore",
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| 332 |
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"318": "prospore membrane",
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| 333 |
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"319": "protein storage vacuole",
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| 334 |
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"320": "protein storage vacuole lumen",
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| 335 |
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"321": "protein storage vacuole membrane",
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| 336 |
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"322": "pseudopodium",
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| 337 |
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"323": "recycling endosome",
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| 338 |
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"324": "recycling endosome membrane",
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| 339 |
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"325": "rhoptry membrane",
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| 340 |
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"326": "rough endoplasmic reticulum",
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| 341 |
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"327": "rough endoplasmic reticulum lumen",
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| 342 |
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"328": "rough endoplasmic reticulum membrane",
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| 343 |
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"329": "ruffle",
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| 344 |
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"330": "ruffle membrane",
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| 345 |
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"331": "sarcolemma",
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| 346 |
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"332": "sarcomere",
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| 347 |
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"333": "sarcoplasmic reticulum",
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| 348 |
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"334": "sarcoplasmic reticulum lumen",
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| 349 |
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"335": "sarcoplasmic reticulum membrane",
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| 350 |
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"336": "secreted",
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| 351 |
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"337": "secretory vesicle",
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| 352 |
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"338": "secretory vesicle lumen",
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| 353 |
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"339": "secretory vesicle membrane",
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| 354 |
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"340": "septate junction",
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| 355 |
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"341": "s-layer",
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| 356 |
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"342": "smooth endoplasmic reticulum membrane",
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| 357 |
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"343": "spindle",
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| 358 |
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"344": "spindle pole",
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| 359 |
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"345": "spindle pole body",
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| 360 |
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"346": "spore",
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| 361 |
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"347": "spore coat",
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| 362 |
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"348": "spore core",
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| 363 |
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"349": "spore cortex",
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| 364 |
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"350": "spore membrane",
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| 365 |
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"351": "spore outer membrane",
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| 366 |
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"352": "spore polar tube",
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| 367 |
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"353": "spore wall",
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| 368 |
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"354": "stereocilium",
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| 369 |
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"355": "stereocilium membrane",
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| 370 |
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"356": "stress fiber",
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| 371 |
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"357": "stress granule",
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| 372 |
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"358": "surface film",
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| 373 |
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"359": "symbiosome",
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| 374 |
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"360": "synapse",
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| 375 |
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"361": "synaptic cell membrane",
|
| 376 |
-
"362": "synaptic cleft",
|
| 377 |
-
"363": "synaptic vesicle",
|
| 378 |
-
"364": "synaptic vesicle membrane",
|
| 379 |
-
"365": "synaptosome",
|
| 380 |
-
"366": "target cell",
|
| 381 |
-
"367": "target cell cytoplasm",
|
| 382 |
-
"368": "target cell membrane",
|
| 383 |
-
"369": "tegument membrane",
|
| 384 |
-
"370": "telomere",
|
| 385 |
-
"371": "thylakoid",
|
| 386 |
-
"372": "tight junction",
|
| 387 |
-
"373": "trans-golgi network",
|
| 388 |
-
"374": "trans-golgi network membrane",
|
| 389 |
-
"375": "trichocyst",
|
| 390 |
-
"376": "t-tubule",
|
| 391 |
-
"377": "vacuole",
|
| 392 |
-
"378": "vacuole lumen",
|
| 393 |
-
"379": "vacuole membrane",
|
| 394 |
-
"380": "vesicle",
|
| 395 |
-
"381": "virion",
|
| 396 |
-
"382": "virion membrane",
|
| 397 |
-
"383": "virion tegument",
|
| 398 |
-
"384": "z line",
|
| 399 |
-
"385": "zona pellucida",
|
| 400 |
-
"386": "zymogen granule",
|
| 401 |
-
"387": "zymogen granule membrane"
|
| 402 |
},
|
| 403 |
"initializer_range": 0.02,
|
| 404 |
"intermediate_size": 2560,
|
| 405 |
"is_folding_model": false,
|
| 406 |
"label2id": {
|
| 407 |
-
"
|
| 408 |
-
"
|
| 409 |
-
"
|
| 410 |
-
"
|
| 411 |
-
"acrosome lumen": 4,
|
| 412 |
-
"acrosome membrane": 5,
|
| 413 |
-
"actin patch": 6,
|
| 414 |
-
"adherens junction": 7,
|
| 415 |
-
"aleurone grain": 8,
|
| 416 |
-
"aleurone grain membrane": 9,
|
| 417 |
-
"amyloplast": 10,
|
| 418 |
-
"amyloplast membrane": 11,
|
| 419 |
-
"anammoxosome": 12,
|
| 420 |
-
"apical cell membrane": 13,
|
| 421 |
-
"apicolateral cell membrane": 14,
|
| 422 |
-
"apicoplast": 15,
|
| 423 |
-
"apoplast": 16,
|
| 424 |
-
"archaeal flagellum": 17,
|
| 425 |
-
"ascus epiplasm": 18,
|
| 426 |
-
"attachment organelle": 19,
|
| 427 |
-
"attachment organelle membrane": 20,
|
| 428 |
-
"autolysosome membrane": 21,
|
| 429 |
-
"autophagosome": 22,
|
| 430 |
-
"autophagosome membrane": 23,
|
| 431 |
-
"axon": 24,
|
| 432 |
-
"bacterial flagellum": 25,
|
| 433 |
-
"bacterial flagellum basal body": 26,
|
| 434 |
-
"bacterial microcompartment": 27,
|
| 435 |
-
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|
| 436 |
-
"basement membrane": 29,
|
| 437 |
-
"basolateral cell membrane": 30,
|
| 438 |
-
"bud": 31,
|
| 439 |
-
"bud membrane": 32,
|
| 440 |
-
"bud neck": 33,
|
| 441 |
-
"bud tip": 34,
|
| 442 |
-
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|
| 443 |
-
"calyx": 36,
|
| 444 |
-
"capsule": 37,
|
| 445 |
-
"carboxysome": 38,
|
| 446 |
-
"caveola": 39,
|
| 447 |
-
"cell cortex": 40,
|
| 448 |
-
"cell envelope": 41,
|
| 449 |
-
"cell inner membrane": 42,
|
| 450 |
-
"cell junction": 43,
|
| 451 |
-
"cell membrane": 44,
|
| 452 |
-
"cell outer membrane": 45,
|
| 453 |
-
"cell projection": 46,
|
| 454 |
-
"cell septum": 47,
|
| 455 |
-
"cell surface": 48,
|
| 456 |
-
"cell tip": 49,
|
| 457 |
-
"cell wall": 53,
|
| 458 |
-
"cellular chromatophore membrane": 50,
|
| 459 |
-
"cellular thylakoid lumen": 51,
|
| 460 |
-
"cellular thylakoid membrane": 52,
|
| 461 |
-
"centriolar satellite": 54,
|
| 462 |
-
"centriole": 55,
|
| 463 |
-
"centromere": 56,
|
| 464 |
-
"centrosome": 57,
|
| 465 |
-
"chloroplast": 58,
|
| 466 |
-
"chloroplast envelope": 59,
|
| 467 |
-
"chloroplast inner membrane": 60,
|
| 468 |
-
"chloroplast intermembrane space": 61,
|
| 469 |
-
"chloroplast membrane": 62,
|
| 470 |
-
"chloroplast nucleoid": 63,
|
| 471 |
-
"chloroplast outer membrane": 64,
|
| 472 |
-
"chloroplast stroma": 65,
|
| 473 |
-
"chloroplast thylakoid": 66,
|
| 474 |
-
"chloroplast thylakoid lumen": 67,
|
| 475 |
-
"chloroplast thylakoid membrane": 68,
|
| 476 |
-
"chlorosome": 69,
|
| 477 |
-
"chlorosome envelope": 70,
|
| 478 |
-
"chromaffin granule": 71,
|
| 479 |
-
"chromaffin granule lumen": 72,
|
| 480 |
-
"chromaffin granule membrane": 73,
|
| 481 |
-
"chromoplast": 74,
|
| 482 |
-
"chromoplast stroma": 75,
|
| 483 |
-
"chromosome": 76,
|
| 484 |
-
"cilium": 77,
|
| 485 |
-
"cilium axoneme": 78,
|
| 486 |
-
"cilium basal body": 79,
|
| 487 |
-
"cilium membrane": 80,
|
| 488 |
-
"cis-golgi network": 81,
|
| 489 |
-
"cis-golgi network membrane": 82,
|
| 490 |
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"clathrin-coated pit": 83,
|
| 491 |
-
"clathrin-coated vesicle": 84,
|
| 492 |
-
"clathrin-coated vesicle membrane": 85,
|
| 493 |
-
"cleavage furrow": 86,
|
| 494 |
-
"coated pit": 87,
|
| 495 |
-
"contractile vacuole": 88,
|
| 496 |
-
"contractile vacuole membrane": 89,
|
| 497 |
-
"copi-coated vesicle": 90,
|
| 498 |
-
"copi-coated vesicle membrane": 91,
|
| 499 |
-
"copii-coated vesicle": 92,
|
| 500 |
-
"copii-coated vesicle membrane": 93,
|
| 501 |
-
"cortical granule": 94,
|
| 502 |
-
"cvt vesicle membrane": 95,
|
| 503 |
-
"cyanelle": 96,
|
| 504 |
-
"cyanelle stroma": 97,
|
| 505 |
-
"cyanelle thylakoid lumen": 98,
|
| 506 |
-
"cyanelle thylakoid membrane": 99,
|
| 507 |
-
"cytolytic granule": 100,
|
| 508 |
-
"cytoplasm": 101,
|
| 509 |
-
"cytoplasmic granule": 102,
|
| 510 |
-
"cytoplasmic granule lumen": 103,
|
| 511 |
-
"cytoplasmic granule membrane": 104,
|
| 512 |
-
"cytoplasmic ribonucleoprotein granule": 105,
|
| 513 |
-
"cytoplasmic vesicle": 106,
|
| 514 |
-
"cytoplasmic vesicle lumen": 107,
|
| 515 |
-
"cytoplasmic vesicle membrane": 108,
|
| 516 |
-
"cytoskeleton": 109,
|
| 517 |
-
"cytosol": 110,
|
| 518 |
-
"dendrite": 111,
|
| 519 |
-
"dendritic spine": 112,
|
| 520 |
-
"dendritic spine membrane": 113,
|
| 521 |
-
"desmosome": 114,
|
| 522 |
-
"dynein axonemal particle": 115,
|
| 523 |
-
"early endosome": 116,
|
| 524 |
-
"early endosome membrane": 117,
|
| 525 |
-
"encapsulin nanocompartment": 118,
|
| 526 |
-
"endomembrane system": 119,
|
| 527 |
-
"endoplasmic reticulum": 120,
|
| 528 |
-
"endoplasmic reticulum lumen": 123,
|
| 529 |
-
"endoplasmic reticulum membrane": 124,
|
| 530 |
-
"endoplasmic reticulum-golgi intermediate compartment": 121,
|
| 531 |
-
"endoplasmic reticulum-golgi intermediate compartment membrane": 122,
|
| 532 |
-
"endosome": 125,
|
| 533 |
-
"endosome membrane": 126,
|
| 534 |
-
"etioplast membrane": 127,
|
| 535 |
-
"extracellular exosome": 128,
|
| 536 |
-
"extracellular matrix": 129,
|
| 537 |
-
"extracellular space": 130,
|
| 538 |
-
"extracellular vesicle": 131,
|
| 539 |
-
"extracellular vesicle membrane": 132,
|
| 540 |
-
"filopodium": 133,
|
| 541 |
-
"filopodium membrane": 134,
|
| 542 |
-
"fimbrium": 135,
|
| 543 |
-
"flagellar pocket": 136,
|
| 544 |
-
"flagellum": 137,
|
| 545 |
-
"flagellum axoneme": 138,
|
| 546 |
-
"flagellum basal body": 139,
|
| 547 |
-
"flagellum membrane": 140,
|
| 548 |
-
"focal adhesion": 141,
|
| 549 |
-
"forespore": 142,
|
| 550 |
-
"forespore inner membrane": 143,
|
| 551 |
-
"forespore intermembrane space": 144,
|
| 552 |
-
"forespore membrane": 145,
|
| 553 |
-
"forespore outer membrane": 146,
|
| 554 |
-
"gap junction": 147,
|
| 555 |
-
"gas vesicle": 148,
|
| 556 |
-
"gas vesicle shell": 149,
|
| 557 |
-
"gem": 150,
|
| 558 |
-
"glycosome": 151,
|
| 559 |
-
"glyoxysome": 152,
|
| 560 |
-
"glyoxysome membrane": 153,
|
| 561 |
-
"golgi apparatus": 154,
|
| 562 |
-
"golgi apparatus lumen": 155,
|
| 563 |
-
"golgi apparatus membrane": 156,
|
| 564 |
-
"golgi outpost": 157,
|
| 565 |
-
"golgi stack": 158,
|
| 566 |
-
"golgi stack membrane": 159,
|
| 567 |
-
"growth cone": 160,
|
| 568 |
-
"hemidesmosome": 161,
|
| 569 |
-
"host cell inner membrane": 162,
|
| 570 |
-
"host cell junction": 163,
|
| 571 |
-
"host cell membrane": 164,
|
| 572 |
-
"host cell outer membrane": 165,
|
| 573 |
-
"host cell surface": 166,
|
| 574 |
-
"host cell wall": 168,
|
| 575 |
-
"host cellular thylakoid membrane": 167,
|
| 576 |
-
"host chloroplast envelope": 169,
|
| 577 |
-
"host cytoplasm": 170,
|
| 578 |
-
"host cytoplasmic vesicle": 171,
|
| 579 |
-
"host cytoplasmic vesicle membrane": 172,
|
| 580 |
-
"host cytoskeleton": 173,
|
| 581 |
-
"host cytosol": 174,
|
| 582 |
-
"host endoplasmic reticulum": 175,
|
| 583 |
-
"host endoplasmic reticulum lumen": 177,
|
| 584 |
-
"host endoplasmic reticulum membrane": 178,
|
| 585 |
-
"host endoplasmic reticulum-golgi intermediate compartment": 176,
|
| 586 |
-
"host endosome": 179,
|
| 587 |
-
"host golgi apparatus": 180,
|
| 588 |
-
"host golgi apparatus membrane": 181,
|
| 589 |
-
"host membrane": 182,
|
| 590 |
-
"host mitochondrion": 183,
|
| 591 |
-
"host mitochondrion inner membrane": 184,
|
| 592 |
-
"host mitochondrion membrane": 185,
|
| 593 |
-
"host mitochondrion outer membrane": 186,
|
| 594 |
-
"host multivesicular body": 187,
|
| 595 |
-
"host nucleolus": 188,
|
| 596 |
-
"host nucleoplasm": 189,
|
| 597 |
-
"host nucleus": 190,
|
| 598 |
-
"host nucleus envelope": 191,
|
| 599 |
-
"host nucleus inner membrane": 192,
|
| 600 |
-
"host nucleus matrix": 193,
|
| 601 |
-
"host nucleus membrane": 194,
|
| 602 |
-
"host perinuclear region": 195,
|
| 603 |
-
"host periplasm": 196,
|
| 604 |
-
"host plasmodesma": 197,
|
| 605 |
-
"host rough endoplasmic reticulum": 198,
|
| 606 |
-
"host rough endoplasmic reticulum membrane": 199,
|
| 607 |
-
"hydrogenosome": 200,
|
| 608 |
-
"hydrogenosome lumen": 201,
|
| 609 |
-
"i band": 202,
|
| 610 |
-
"inflammasome": 203,
|
| 611 |
-
"inner membrane complex": 204,
|
| 612 |
-
"interphotoreceptor matrix": 205,
|
| 613 |
-
"invadopodium membrane": 206,
|
| 614 |
-
"kinetochore": 207,
|
| 615 |
-
"kinetoplast": 208,
|
| 616 |
-
"lamellipodium": 209,
|
| 617 |
-
"lamellipodium membrane": 210,
|
| 618 |
-
"late endosome": 211,
|
| 619 |
-
"late endosome lumen": 212,
|
| 620 |
-
"late endosome membrane": 213,
|
| 621 |
-
"lateral cell membrane": 214,
|
| 622 |
-
"lipid droplet": 215,
|
| 623 |
-
"lysosome": 216,
|
| 624 |
-
"lysosome lumen": 217,
|
| 625 |
-
"lysosome membrane": 218,
|
| 626 |
-
"lytic vacuole": 219,
|
| 627 |
-
"m line": 247,
|
| 628 |
-
"magnetosome": 220,
|
| 629 |
-
"magnetosome membrane": 221,
|
| 630 |
-
"melanosome": 222,
|
| 631 |
-
"melanosome lumen": 223,
|
| 632 |
-
"melanosome membrane": 224,
|
| 633 |
-
"membrane": 225,
|
| 634 |
-
"membrane raft": 226,
|
| 635 |
-
"microneme": 227,
|
| 636 |
-
"microneme membrane": 228,
|
| 637 |
-
"microsome": 229,
|
| 638 |
-
"microsome membrane": 230,
|
| 639 |
-
"microtubule organizing center": 231,
|
| 640 |
-
"microvillus": 232,
|
| 641 |
-
"microvillus membrane": 233,
|
| 642 |
-
"midbody": 234,
|
| 643 |
-
"midbody ring": 235,
|
| 644 |
-
"mitochondrion": 236,
|
| 645 |
-
"mitochondrion envelope": 237,
|
| 646 |
-
"mitochondrion inner membrane": 238,
|
| 647 |
-
"mitochondrion intermembrane space": 239,
|
| 648 |
-
"mitochondrion matrix": 240,
|
| 649 |
-
"mitochondrion membrane": 241,
|
| 650 |
-
"mitochondrion nucleoid": 242,
|
| 651 |
-
"mitochondrion outer membrane": 243,
|
| 652 |
-
"mitosome": 244,
|
| 653 |
-
"mitosome matrix": 245,
|
| 654 |
-
"mitosome membrane": 246,
|
| 655 |
-
"multivesicular body": 248,
|
| 656 |
-
"multivesicular body membrane": 249,
|
| 657 |
-
"myelin membrane": 250,
|
| 658 |
-
"myofibril": 251,
|
| 659 |
-
"nematocyst": 252,
|
| 660 |
-
"neuron projection": 254,
|
| 661 |
-
"neuronal dense core vesicle membrane": 253,
|
| 662 |
-
"nuclear body": 255,
|
| 663 |
-
"nuclear pore complex": 256,
|
| 664 |
-
"nucleoid": 257,
|
| 665 |
-
"nucleolus": 258,
|
| 666 |
-
"nucleoplasm": 259,
|
| 667 |
-
"nucleus": 260,
|
| 668 |
-
"nucleus envelope": 261,
|
| 669 |
-
"nucleus inner membrane": 262,
|
| 670 |
-
"nucleus lamina": 263,
|
| 671 |
-
"nucleus matrix": 264,
|
| 672 |
-
"nucleus membrane": 265,
|
| 673 |
-
"nucleus outer membrane": 266,
|
| 674 |
-
"nucleus speckle": 267,
|
| 675 |
-
"organellar chromatophore": 268,
|
| 676 |
-
"organellar chromatophore thylakoid membrane": 269,
|
| 677 |
-
"p-body": 273,
|
| 678 |
-
"parasitophorous vacuole": 270,
|
| 679 |
-
"parasitophorous vacuole lumen": 271,
|
| 680 |
-
"parasitophorous vacuole membrane": 272,
|
| 681 |
-
"peribacteroid membrane": 274,
|
| 682 |
-
"peribacteroid space": 275,
|
| 683 |
-
"perikaryon": 276,
|
| 684 |
-
"perinuclear region": 277,
|
| 685 |
-
"perinuclear theca": 278,
|
| 686 |
-
"periplasm": 279,
|
| 687 |
-
"periplasmic flagellum": 280,
|
| 688 |
-
"perispore": 281,
|
| 689 |
-
"peroxisome": 282,
|
| 690 |
-
"peroxisome matrix": 283,
|
| 691 |
-
"peroxisome membrane": 284,
|
| 692 |
-
"phagocytic cup": 285,
|
| 693 |
-
"phagosome": 286,
|
| 694 |
-
"phagosome membrane": 287,
|
| 695 |
-
"photoreceptor inner segment": 288,
|
| 696 |
-
"photoreceptor inner segment membrane": 289,
|
| 697 |
-
"photoreceptor outer segment": 290,
|
| 698 |
-
"photoreceptor outer segment membrane": 291,
|
| 699 |
-
"phragmoplast": 292,
|
| 700 |
-
"plasmodesma": 293,
|
| 701 |
-
"plastid": 294,
|
| 702 |
-
"plastid inner membrane": 295,
|
| 703 |
-
"plastid membrane": 296,
|
| 704 |
-
"plastid outer membrane": 297,
|
| 705 |
-
"plastid stroma": 298,
|
| 706 |
-
"plastid thylakoid membrane": 299,
|
| 707 |
-
"plastoglobule": 300,
|
| 708 |
-
"pml body": 301,
|
| 709 |
-
"podosome": 302,
|
| 710 |
-
"pollen coat": 303,
|
| 711 |
-
"postsynapse": 304,
|
| 712 |
-
"postsynaptic cell membrane": 305,
|
| 713 |
-
"postsynaptic density": 306,
|
| 714 |
-
"postsynaptic density membrane": 307,
|
| 715 |
-
"postsynaptic recycling endosome membrane": 308,
|
| 716 |
-
"preautophagosomal structure": 309,
|
| 717 |
-
"preautophagosomal structure membrane": 310,
|
| 718 |
-
"presynapse": 311,
|
| 719 |
-
"presynaptic active zone": 312,
|
| 720 |
-
"presynaptic cell membrane": 313,
|
| 721 |
-
"prevacuolar compartment": 314,
|
| 722 |
-
"prevacuolar compartment membrane": 315,
|
| 723 |
-
"primary cell wall": 316,
|
| 724 |
-
"prospore": 317,
|
| 725 |
-
"prospore membrane": 318,
|
| 726 |
-
"protein storage vacuole": 319,
|
| 727 |
-
"protein storage vacuole lumen": 320,
|
| 728 |
-
"protein storage vacuole membrane": 321,
|
| 729 |
-
"pseudopodium": 322,
|
| 730 |
-
"recycling endosome": 323,
|
| 731 |
-
"recycling endosome membrane": 324,
|
| 732 |
-
"rhoptry membrane": 325,
|
| 733 |
-
"rough endoplasmic reticulum": 326,
|
| 734 |
-
"rough endoplasmic reticulum lumen": 327,
|
| 735 |
-
"rough endoplasmic reticulum membrane": 328,
|
| 736 |
-
"ruffle": 329,
|
| 737 |
-
"ruffle membrane": 330,
|
| 738 |
-
"s-layer": 341,
|
| 739 |
-
"sarcolemma": 331,
|
| 740 |
-
"sarcomere": 332,
|
| 741 |
-
"sarcoplasmic reticulum": 333,
|
| 742 |
-
"sarcoplasmic reticulum lumen": 334,
|
| 743 |
-
"sarcoplasmic reticulum membrane": 335,
|
| 744 |
-
"secreted": 336,
|
| 745 |
-
"secretory vesicle": 337,
|
| 746 |
-
"secretory vesicle lumen": 338,
|
| 747 |
-
"secretory vesicle membrane": 339,
|
| 748 |
-
"septate junction": 340,
|
| 749 |
-
"smooth endoplasmic reticulum membrane": 342,
|
| 750 |
-
"spindle": 343,
|
| 751 |
-
"spindle pole": 344,
|
| 752 |
-
"spindle pole body": 345,
|
| 753 |
-
"spore": 346,
|
| 754 |
-
"spore coat": 347,
|
| 755 |
-
"spore core": 348,
|
| 756 |
-
"spore cortex": 349,
|
| 757 |
-
"spore membrane": 350,
|
| 758 |
-
"spore outer membrane": 351,
|
| 759 |
-
"spore polar tube": 352,
|
| 760 |
-
"spore wall": 353,
|
| 761 |
-
"stereocilium": 354,
|
| 762 |
-
"stereocilium membrane": 355,
|
| 763 |
-
"stress fiber": 356,
|
| 764 |
-
"stress granule": 357,
|
| 765 |
-
"surface film": 358,
|
| 766 |
-
"symbiosome": 359,
|
| 767 |
-
"synapse": 360,
|
| 768 |
-
"synaptic cell membrane": 361,
|
| 769 |
-
"synaptic cleft": 362,
|
| 770 |
-
"synaptic vesicle": 363,
|
| 771 |
-
"synaptic vesicle membrane": 364,
|
| 772 |
-
"synaptosome": 365,
|
| 773 |
-
"t-tubule": 376,
|
| 774 |
-
"target cell": 366,
|
| 775 |
-
"target cell cytoplasm": 367,
|
| 776 |
-
"target cell membrane": 368,
|
| 777 |
-
"tegument membrane": 369,
|
| 778 |
-
"telomere": 370,
|
| 779 |
-
"thylakoid": 371,
|
| 780 |
-
"tight junction": 372,
|
| 781 |
-
"trans-golgi network": 373,
|
| 782 |
-
"trans-golgi network membrane": 374,
|
| 783 |
-
"trichocyst": 375,
|
| 784 |
-
"vacuole": 377,
|
| 785 |
-
"vacuole lumen": 378,
|
| 786 |
-
"vacuole membrane": 379,
|
| 787 |
-
"vesicle": 380,
|
| 788 |
-
"virion": 381,
|
| 789 |
-
"virion membrane": 382,
|
| 790 |
-
"virion tegument": 383,
|
| 791 |
-
"z line": 384,
|
| 792 |
-
"zona pellucida": 385,
|
| 793 |
-
"zymogen granule": 386,
|
| 794 |
-
"zymogen granule membrane": 387
|
| 795 |
},
|
| 796 |
"layer_norm_eps": 1e-05,
|
| 797 |
"mask_token_id": 32,
|
|
@@ -801,7 +33,6 @@
|
|
| 801 |
"num_hidden_layers": 30,
|
| 802 |
"pad_token_id": 1,
|
| 803 |
"position_embedding_type": "rotary",
|
| 804 |
-
"problem_type": "multi_label_classification",
|
| 805 |
"token_dropout": true,
|
| 806 |
"torch_dtype": "float32",
|
| 807 |
"transformers_version": "4.43.3",
|
|
|
|
| 1 |
{
|
| 2 |
+
"_name_or_path": "/groups/pupko/edodotan/PretrainAccelerator/validators/origin/models/results/facebook_esm2_t30_150M_UR50D_long/checkpoint-1200000/",
|
| 3 |
"architectures": [
|
| 4 |
"EsmForSequenceClassification"
|
| 5 |
],
|
|
|
|
| 11 |
"hidden_dropout_prob": 0.0,
|
| 12 |
"hidden_size": 640,
|
| 13 |
"id2label": {
|
| 14 |
+
"0": "Archaea",
|
| 15 |
+
"1": "Bacteria",
|
| 16 |
+
"2": "Eukaryota",
|
| 17 |
+
"3": "Viruses"
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| 18 |
},
|
| 19 |
"initializer_range": 0.02,
|
| 20 |
"intermediate_size": 2560,
|
| 21 |
"is_folding_model": false,
|
| 22 |
"label2id": {
|
| 23 |
+
"Archaea": 0,
|
| 24 |
+
"Bacteria": 1,
|
| 25 |
+
"Eukaryota": 2,
|
| 26 |
+
"Viruses": 3
|
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| 27 |
},
|
| 28 |
"layer_norm_eps": 1e-05,
|
| 29 |
"mask_token_id": 32,
|
|
|
|
| 33 |
"num_hidden_layers": 30,
|
| 34 |
"pad_token_id": 1,
|
| 35 |
"position_embedding_type": "rotary",
|
|
|
|
| 36 |
"token_dropout": true,
|
| 37 |
"torch_dtype": "float32",
|
| 38 |
"transformers_version": "4.43.3",
|
model.safetensors
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:dfc8a697e50541768237cd44fdf9667559400c83febe7c52f11714914debc12e
|
| 3 |
+
size 595254332
|