Done

.gitignore

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+checkpoint-*/

config.json

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+{
+  "_name_or_path": "emilyalsentzer/Bio_ClinicalBERT",
+  "architectures": [
+    "BertForTokenClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "id2label": {
+    "-100": "IGN",
+    "0": "O",
+    "1": "B-Gene_or_gene_product",
+    "2": "I-Gene_or_gene_product",
+    "3": "B-Cancer",
+    "4": "I-Cancer",
+    "5": "B-Cell",
+    "6": "I-Cell",
+    "7": "B-Organism",
+    "8": "B-Simple_chemical",
+    "9": "I-Simple_chemical",
+    "10": "B-Multi-tissue_structure",
+    "11": "I-Multi-tissue_structure",
+    "12": "B-Organ",
+    "13": "B-Organism_subdivision",
+    "14": "B-Tissue",
+    "15": "I-Tissue",
+    "16": "B-Immaterial_anatomical_entity",
+    "17": "B-Organism_substance",
+    "18": "I-Organism_substance",
+    "19": "I-Organism",
+    "20": "I-Organism_subdivision",
+    "21": "B-Cellular_component",
+    "22": "I-Immaterial_anatomical_entity",
+    "23": "I-Cellular_component",
+    "24": "B-Pathological_formation",
+    "25": "I-Pathological_formation",
+    "26": "I-Organ",
+    "27": "B-Amino_acid",
+    "28": "I-Amino_acid",
+    "29": "B-Anatomical_system",
+    "30": "I-Anatomical_system",
+    "31": "B-Developing_anatomical_structure",
+    "32": "I-Developing_anatomical_structure"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "label2id": {
+    "B-Amino_acid": 27,
+    "B-Anatomical_system": 29,
+    "B-Cancer": 3,
+    "B-Cell": 5,
+    "B-Cellular_component": 21,
+    "B-Developing_anatomical_structure": 31,
+    "B-Gene_or_gene_product": 1,
+    "B-Immaterial_anatomical_entity": 16,
+    "B-Multi-tissue_structure": 10,
+    "B-Organ": 12,
+    "B-Organism": 7,
+    "B-Organism_subdivision": 13,
+    "B-Organism_substance": 17,
+    "B-Pathological_formation": 24,
+    "B-Simple_chemical": 8,
+    "B-Tissue": 14,
+    "I-Amino_acid": 28,
+    "I-Anatomical_system": 30,
+    "I-Cancer": 4,
+    "I-Cell": 6,
+    "I-Cellular_component": 23,
+    "I-Developing_anatomical_structure": 32,
+    "I-Gene_or_gene_product": 2,
+    "I-Immaterial_anatomical_entity": 22,
+    "I-Multi-tissue_structure": 11,
+    "I-Organ": 26,
+    "I-Organism": 19,
+    "I-Organism_subdivision": 20,
+    "I-Organism_substance": 18,
+    "I-Pathological_formation": 25,
+    "I-Simple_chemical": 9,
+    "I-Tissue": 15,
+    "O": 0
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 512,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "torch_dtype": "float32",
+  "transformers_version": "4.21.1",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 28996
+}

pytorch_model.bin

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special_tokens_map.json

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+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer_config.json

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+{
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": true,
+  "mask_token": "[MASK]",
+  "name_or_path": "ericntay/clinical_bert_ft",
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "special_tokens_map_file": null,
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

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