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README.md
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@@ -78,9 +78,25 @@ Installing torch can be the most complex part
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<img width="100%" src= "figures/Screenshot%20from%202025-07-11%2014-19-21.png">
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</p>
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| PTM type | Residue trained on | Number of clusters allocated| input indexes |
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| -------------------- | ------------- |--------------------------|------------|-------------|
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### Downloading this repository
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<img width="100%" src= "figures/Screenshot%20from%202025-07-11%2014-19-21.png">
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</p>
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| PTM type | Residue trained on | Number of clusters allocated|output indexes|input indexes (training)|
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| -------------------- | ------------- |--------------------------|------------|-------------|
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| ST_Phosphorylation | S,T | 5 | 0 or 1 | 0-4 |
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| Y_Phosphorylation | Y | 1 | 3 | 25 |
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| K_Ubiquitination | K | 20 | 2 | 5-24 |
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| K_Acetylation | K | 10 | 4 | 26-35 |
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| AM_Acetylation | A,M | 1 | 13 or 14 | 49 |
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| N_N-linked-Glycosylation | N | 1 | 5 | 36 |
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| ST_O-linked-Glycosylation | S,T | 5 | 6 or 7 | 37-41 |
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| RK_Methylation | RK | 4 | 8 or 9 | 42-45 |
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| K_Sumoylation | K | 1 | 10 | 46 |
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| K_Malonylation | K | 1 | 11 | 53 |
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| M_Sulfoxidation | M | 1 | 12 | 48 |
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| C_Glutathionylation | C | 1 | 15 | 50 |
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| C_S-palmitoylation | C | 1 | 16 | 51 |
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| PK_Hydroxylation | P,K | 1 | 17 or 18 | 52 |
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|negitve| all res | N/A | 19 | 53|
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### Downloading this repository
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