| { |
| "coverage": { |
| "records_missing_assay_join": 695, |
| "records_with_assay_join": 86620, |
| "records_with_citation_doi_or_pmid": 86764, |
| "records_with_publication_date": 87315 |
| }, |
| "duplicates": { |
| "duplicate_pairs_across_assays": 4531, |
| "duplicate_reactant_set_ids": 122, |
| "extra_assay_instances": 6624, |
| "extra_reactant_set_rows": 190, |
| "pairs_with_multiple_measurement_types": 4531 |
| }, |
| "emitted_records": { |
| "by_relation": { |
| "<": 451, |
| "=": 75971, |
| ">": 10893 |
| }, |
| "by_type": { |
| "EC50": 4144, |
| "IC50": 55805, |
| "Kd": 2615, |
| "Ki": 24751 |
| }, |
| "by_type_relation": { |
| "EC50|<": 7, |
| "EC50|=": 3753, |
| "EC50|>": 384, |
| "IC50|<": 306, |
| "IC50|=": 48288, |
| "IC50|>": 7211, |
| "Kd|<": 7, |
| "Kd|=": 2455, |
| "Kd|>": 153, |
| "Ki|<": 131, |
| "Ki|=": 21475, |
| "Ki|>": 3145 |
| }, |
| "total": 87315 |
| }, |
| "exact_gold_kd_records": 2432, |
| "gold_exact_kd": { |
| "pkd_above_12_review_flag": 3, |
| "pkd_below_3_review_flag": 47, |
| "pkd_max": 13.327902142064282, |
| "pkd_min": 1.1146161610532512, |
| "records": 2432, |
| "review_flags_are_not_filters": true, |
| "unique_assays": 245, |
| "unique_pairs": 2198, |
| "unique_proteins": 442 |
| }, |
| "ordering": "stable source order: main-TSV row order, then Reactant_set_id assay mapping order, then fixed measurement-type order Ki, IC50, Kd, EC50", |
| "outputs": { |
| "gold_exact_kd.jsonl": { |
| "bytes": 7768913, |
| "records": 2432, |
| "sha256": "432507f29163acf37c7c74e62c3bba47b1dff02a38e34945c1b06cac14c7282e" |
| }, |
| "source_records.jsonl": { |
| "bytes": 387594449, |
| "records": 87315, |
| "sha256": "1e9963217b9ed65528ca477adcba66beea1fa341a1c1c6d41cd789332ab85bbb" |
| } |
| }, |
| "rejections": { |
| "cell_level": {}, |
| "gold_excluded": { |
| "missing_assay_join": 23, |
| "non_exact_relation": 160, |
| "non_kd_type": 84700 |
| }, |
| "gold_exclusion_reasons_are_nonexclusive": true, |
| "row_level": { |
| "invalid_smiles": 740, |
| "missing_smiles": 56, |
| "multichain_target": 8157, |
| "no_supported_measurement": 1105 |
| }, |
| "rows_flagged_invalid_smiles": 796, |
| "rows_flagged_missing_sequence": 0, |
| "rows_flagged_multichain": 8157 |
| }, |
| "rows_with_emitted_measurements": 83654, |
| "schema_version": "bindingdb-source-envelope/v1", |
| "source_database": "BindingDB", |
| "source_release": "202607", |
| "source_release_files": { |
| "assays_zip": { |
| "member": "BindingDB_Assays.tsv", |
| "sha256": "27cc219d3fc9517eba5cbcaf7cdac1c3065371e06e62d3e5bd147dd3e0cd3e12", |
| "url": "https://www.bindingdb.org/rwd/bind/downloads/BindingDB_Assays_202607_tsv.zip", |
| "zip_name": "BindingDB_Assays_202607_tsv.zip" |
| }, |
| "main_zip": { |
| "member": "BindingDB_BindingDB_Articles.tsv", |
| "sha256": "d2584d1519318d00ab5f46289da5ab3549affe732d598a5072f8777b6b3b5262", |
| "url": "https://www.bindingdb.org/rwd/bind/downloads/BindingDB_BindingDB_Articles_202607_tsv.zip", |
| "zip_name": "BindingDB_BindingDB_Articles_202607_tsv.zip" |
| }, |
| "mapping_zip": { |
| "member": "BindingDB_rsid_eaids.tsv", |
| "sha256": "9bc94ffd13de2fdcfc40e6c73c8b81c9e745ca0103632545b7120a1f2247f84b", |
| "url": "https://www.bindingdb.org/rwd/bind/downloads/BindingDB_rsid_eaids_202607_tsv.zip", |
| "zip_name": "BindingDB_rsid_eaids_202607_tsv.zip" |
| } |
| }, |
| "source_rows": 93712, |
| "uniques": { |
| "assays": 3125, |
| "ligands": 43413, |
| "pairs": 74994, |
| "proteins": 2210 |
| } |
| } |
|
|