README.md

---
license: other
---
## AIDO.Cell

[![License](https://img.shields.io/badge/license-GenBio_AI_Community_License-orange)](https://github.com/genbio-ai/ModelGenerator/blob/main/LICENSE)

For a more detailed description, refer to the SOTA model in this collection https://huggingface.co/genbio-ai/AIDO.Cell-100M

## How to Use

For quickstart examples with vanilla HuggingFace, see [this repo](https://github.com/genbio-ai/ModelGenerator/tree/main/huggingface/aido.cell)

To reproduce experiments, see [ModelGenerator](https://github.com/genbio-ai/modelgenerator) under `experiments/AIDO.Cell`.


## Citation


Please cite AIDO.Cell using the following BibTeX code:
```
@inproceedings{ho_scaling_2024,
	title = {Scaling Dense Representations for Single Cell with Transcriptome-Scale Context},
	url = {https://www.biorxiv.org/content/10.1101/2024.11.28.625303v1},
	doi = {10.1101/2024.11.28.625303},
	publisher = {bioRxiv},
	author = {Ho, Nicholas and Ellington, Caleb N. and Hou, Jinyu and Addagudi, Sohan and Mo, Shentong and Tao, Tianhua and Li, Dian and Zhuang, Yonghao and Wang, Hongyi and Cheng, Xingyi and Song, Le and Xing, Eric P.},
	year = {2024},
    booktitle={NeurIPS 2024 Workshop on AI for New Drug Modalities},
}
```