hugoly commited on
Commit
3ad26ed
·
verified ·
1 Parent(s): 14fea84

Upload README.md with huggingface_hub

Browse files
Files changed (1) hide show
  1. README.md +43 -5
README.md CHANGED
@@ -1,5 +1,43 @@
1
- ---
2
- license: other
3
- license_name: genbio-community-license
4
- license_link: LICENSE
5
- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+
2
+
3
+ # AIDO.StructurePrediction
4
+
5
+ This model is a full-atom structure prediction model like AlphaFold3.
6
+ Our model supports a wide range of data types including proteins, DNA, RNA, ligands, antibody, nanobody and their complex structures.
7
+
8
+
9
+ <img src="doc/assets/fig1.png" width="500" />
10
+ <img src="doc/assets/fig4.png" width="500" />
11
+
12
+ <img src="doc/assets/fig2.png" width="500" />
13
+ <img src="doc/assets/fig3.png" width="450" />
14
+
15
+
16
+
17
+ ## Research & Development
18
+
19
+ The AIDO.StructurePrediction model is an AF3-like structure prediction model developed based on the public Protenix.
20
+ We integrate many new ideas and training strategies. According to our benchmarking,
21
+ our model achieved better performance on antibody or naonbody related data and comparable performance with AF3.
22
+
23
+
24
+
25
+ ## **Benchmarking Model Performance**
26
+
27
+ <img src="assets/hln.png" width="500" />
28
+ <img src="assets/monomer.png" width="500" />
29
+
30
+ <img src="assets/ana.png" width="500" />
31
+ <img src="assets/prl.png" width="500" />
32
+
33
+
34
+ ## Acknowledgments
35
+ Special thanks to ByteDance for open-sourcing the Protenix code(https://github.com/bytedance/Protenix), which has been the foundation for our AIDO.StructurePrediction model.
36
+
37
+
38
+ ## How to Use
39
+ Please see `experiments/AIDO.StructurePrediction` in [Model Generator](https://github.com/genbio-ai/modelgenerator) for more details.
40
+
41
+ ## Setup
42
+ Install [Model Generator](https://github.com/genbio-ai/modelgenerator)
43
+