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config.json

@@ -0,0 +1,197 @@
+{
+  "_attn_implementation_autoset": true,
+  "_name_or_path": "d4data/biomedical-ner-all",
+  "activation": "gelu",
+  "architectures": [
+    "DistilBertForTokenClassification"
+  ],
+  "attention_dropout": 0.1,
+  "dim": 768,
+  "dropout": 0.1,
+  "hidden_dim": 3072,
+  "id2label": {
+    "0": "O",
+    "1": "B-Activity",
+    "2": "B-Administration",
+    "3": "B-Age",
+    "4": "B-Area",
+    "5": "B-Biological_attribute",
+    "6": "B-Biological_structure",
+    "7": "B-Clinical_event",
+    "8": "B-Color",
+    "9": "B-Coreference",
+    "10": "B-Date",
+    "11": "B-Detailed_description",
+    "12": "B-Diagnostic_procedure",
+    "13": "B-Disease_disorder",
+    "14": "B-Distance",
+    "15": "B-Dosage",
+    "16": "B-Duration",
+    "17": "B-Family_history",
+    "18": "B-Frequency",
+    "19": "B-Height",
+    "20": "B-History",
+    "21": "B-Lab_value",
+    "22": "B-Mass",
+    "23": "B-Medication",
+    "24": "B-Non[biological](Detailed_description",
+    "25": "B-Nonbiological_location",
+    "26": "B-Occupation",
+    "27": "B-Other_entity",
+    "28": "B-Other_event",
+    "29": "B-Outcome",
+    "30": "B-Personal_[back](Biological_structure",
+    "31": "B-Personal_background",
+    "32": "B-Qualitative_concept",
+    "33": "B-Quantitative_concept",
+    "34": "B-Severity",
+    "35": "B-Sex",
+    "36": "B-Shape",
+    "37": "B-Sign_symptom",
+    "38": "B-Subject",
+    "39": "B-Texture",
+    "40": "B-Therapeutic_procedure",
+    "41": "B-Time",
+    "42": "B-Volume",
+    "43": "B-Weight",
+    "44": "I-Activity",
+    "45": "I-Administration",
+    "46": "I-Age",
+    "47": "I-Area",
+    "48": "I-Biological_attribute",
+    "49": "I-Biological_structure",
+    "50": "I-Clinical_event",
+    "51": "I-Color",
+    "52": "I-Coreference",
+    "53": "I-Date",
+    "54": "I-Detailed_description",
+    "55": "I-Diagnostic_procedure",
+    "56": "I-Disease_disorder",
+    "57": "I-Distance",
+    "58": "I-Dosage",
+    "59": "I-Duration",
+    "60": "I-Family_history",
+    "61": "I-Frequency",
+    "62": "I-Height",
+    "63": "I-History",
+    "64": "I-Lab_value",
+    "65": "I-Mass",
+    "66": "I-Medication",
+    "67": "I-Nonbiological_location",
+    "68": "I-Occupation",
+    "69": "I-Other_entity",
+    "70": "I-Other_event",
+    "71": "I-Outcome",
+    "72": "I-Personal_background",
+    "73": "I-Qualitative_concept",
+    "74": "I-Quantitative_concept",
+    "75": "I-Severity",
+    "76": "I-Shape",
+    "77": "I-Sign_symptom",
+    "78": "I-Subject",
+    "79": "I-Texture",
+    "80": "I-Therapeutic_procedure",
+    "81": "I-Time",
+    "82": "I-Volume",
+    "83": "I-Weight"
+  },
+  "initializer_range": 0.02,
+  "label2id": {
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+    "B-Administration": 2,
+    "B-Age": 3,
+    "B-Area": 4,
+    "B-Biological_attribute": 5,
+    "B-Biological_structure": 6,
+    "B-Clinical_event": 7,
+    "B-Color": 8,
+    "B-Coreference": 9,
+    "B-Date": 10,
+    "B-Detailed_description": 11,
+    "B-Diagnostic_procedure": 12,
+    "B-Disease_disorder": 13,
+    "B-Distance": 14,
+    "B-Dosage": 15,
+    "B-Duration": 16,
+    "B-Family_history": 17,
+    "B-Frequency": 18,
+    "B-Height": 19,
+    "B-History": 20,
+    "B-Lab_value": 21,
+    "B-Mass": 22,
+    "B-Medication": 23,
+    "B-Non[biological](Detailed_description": 24,
+    "B-Nonbiological_location": 25,
+    "B-Occupation": 26,
+    "B-Other_entity": 27,
+    "B-Other_event": 28,
+    "B-Outcome": 29,
+    "B-Personal_[back](Biological_structure": 30,
+    "B-Personal_background": 31,
+    "B-Qualitative_concept": 32,
+    "B-Quantitative_concept": 33,
+    "B-Severity": 34,
+    "B-Sex": 35,
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+    "B-Volume": 42,
+    "B-Weight": 43,
+    "I-Activity": 44,
+    "I-Administration": 45,
+    "I-Age": 46,
+    "I-Area": 47,
+    "I-Biological_attribute": 48,
+    "I-Biological_structure": 49,
+    "I-Clinical_event": 50,
+    "I-Color": 51,
+    "I-Coreference": 52,
+    "I-Date": 53,
+    "I-Detailed_description": 54,
+    "I-Diagnostic_procedure": 55,
+    "I-Disease_disorder": 56,
+    "I-Distance": 57,
+    "I-Dosage": 58,
+    "I-Duration": 59,
+    "I-Family_history": 60,
+    "I-Frequency": 61,
+    "I-Height": 62,
+    "I-History": 63,
+    "I-Lab_value": 64,
+    "I-Mass": 65,
+    "I-Medication": 66,
+    "I-Nonbiological_location": 67,
+    "I-Occupation": 68,
+    "I-Other_entity": 69,
+    "I-Other_event": 70,
+    "I-Outcome": 71,
+    "I-Personal_background": 72,
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+    "I-Quantitative_concept": 74,
+    "I-Severity": 75,
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+    "I-Sign_symptom": 77,
+    "I-Subject": 78,
+    "I-Texture": 79,
+    "I-Therapeutic_procedure": 80,
+    "I-Time": 81,
+    "I-Volume": 82,
+    "I-Weight": 83,
+    "O": 0
+  },
+  "max_position_embeddings": 512,
+  "model_type": "distilbert",
+  "n_heads": 12,
+  "n_layers": 6,
+  "pad_token_id": 0,
+  "qa_dropout": 0.1,
+  "seq_classif_dropout": 0.2,
+  "sinusoidal_pos_embds": false,
+  "tie_weights_": true,
+  "torch_dtype": "float32",
+  "transformers_version": "4.49.0",
+  "vocab_size": 30522
+}

onnx/model.onnx

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onnx/model_bnb4.onnx

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onnx/model_fp16.onnx

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onnx/model_int8.onnx

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onnx/model_q4.onnx

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onnx/model_q4f16.onnx

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onnx/model_quantized.onnx

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onnx/model_uint8.onnx

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quantize_config.json

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+{
+    "modes": [
+        "fp16",
+        "q8",
+        "int8",
+        "uint8",
+        "q4",
+        "q4f16",
+        "bnb4"
+    ],
+    "per_channel": true,
+    "reduce_range": true,
+    "block_size": null,
+    "is_symmetric": true,
+    "accuracy_level": null,
+    "quant_type": 1,
+    "op_block_list": null
+}

special_tokens_map.json

@@ -0,0 +1,37 @@
+{
+  "cls_token": {
+    "content": "[CLS]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "mask_token": {
+    "content": "[MASK]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "pad_token": {
+    "content": "[PAD]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
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+  "sep_token": {
+    "content": "[SEP]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "unk_token": {
+    "content": "[UNK]",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  }
+}

tokenizer_config.json

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+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "100": {
+      "content": "[UNK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "101": {
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+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
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+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
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+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": false,
+  "cls_token": "[CLS]",
+  "cuda": 0,
+  "do_lower_case": true,
+  "extra_special_tokens": {},
+  "mask_token": "[MASK]",
+  "max_length": 512,
+  "model_max_length": 512,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "stride": 0,
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "DistilBertTokenizer",
+  "truncation_side": "right",
+  "truncation_strategy": "longest_first",
+  "unk_token": "[UNK]"
+}