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README.md
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## Model Performance
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- **Best Model**:
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- **Test AUC**: 0.
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- **Training Data**:
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- **Test Data**:
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## Intended Use
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| Model | CV AUC | Test AUC | Test Accuracy |
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## Limitations
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If you use SignalSeeker in your research, please cite:
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```bibtex
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@misc{
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title={SignalSeeker: Machine Learning Ensemble for Protein Signal Peptide Prediction},
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author={
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year={
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url={https://huggingface.co/
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}
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```
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## Contact
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For questions or issues, please open an issue on the [GitHub repository](https://github.com/
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## License
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## Model Performance
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- **Best Model**: Logistic regression (L2)
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- **Test AUC**: 0.99433
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- **Training Data**: 5000 mixed seqeunces from UniProt verified eukaryotic proteins
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- **Test Data**: 1000 mixed seqeunces from UniProt verified eukaryotic proteins, isolated from training data
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## Intended Use
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| Model | CV AUC | Test AUC | Test Accuracy |
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|-------|--------|----------|---------------|
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| Logistic regression (L2) | 0.99433 | 0.98432 | 0.92284 |
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| Random Forest (Regularised) | 0.98941 | 0.98869 | 0.96192 |
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| Extra Trees (Regularised) | 0.99032 | 0.99072 | 0.94899 |
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| SVM (Conservative) | 0.98711 | 0.98439 | 0.92284 |
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## Limitations
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If you use SignalSeeker in your research, please cite:
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```bibtex
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@misc{signalseeker2025,
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title={SignalSeeker: Machine Learning Ensemble for Protein Signal Peptide Prediction},
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author={Hugo Cooper},
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year={2025},
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url={https://huggingface.co/hcoops/signalseeker}
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}
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```
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## Contact
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For questions or issues, please open an issue on the [GitHub repository](https://github.com/hcoo25/signalseeker).
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## License
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