First model version
Browse files- Coding_Challenge_for_Fatima_Fellowship.html +0 -0
- README.md +1 -0
- model.py +44 -0
- models/CifarOrientationClassifier100 run 1.h5 +3 -0
- transforms.py +32 -0
- utils.py +203 -0
Coding_Challenge_for_Fatima_Fellowship.html
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README.md
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# Orientation Classifier
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model.py
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import os
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import numpy as np
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import tensorflow as tf
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from tensorflow.keras.layers import *
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#os.environ["CUDA_VISIBLE_DEVICES"] = "-1"
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class OrientationClassifier(tf.keras.Model):
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def __init__(self,input_shape,hidden_dim,no_classes=1,isTrainable = False):
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super().__init__()
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resnet = tf.keras.applications.resnet50.ResNet50(include_top=False,input_shape=input_shape)
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resnet.trainable = isTrainable
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self.featureExtractor = tf.keras.models.Sequential([
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resnet,
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GlobalAveragePooling2D()
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])
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self.classifier = tf.keras.models.Sequential([
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Dense(hidden_dim,activation = 'relu'),
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BatchNormalization(),
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Dense(hidden_dim/2,activation = 'relu'),
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BatchNormalization(),
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Dense(hidden_dim/4,activation = 'relu'),
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BatchNormalization(),
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Dense(no_classes,activation = 'sigmoid')
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])
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def call(self, inputs):
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x = self.featureExtractor(inputs)
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preds = self.classifier(x)
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return preds
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models/CifarOrientationClassifier100 run 1.h5
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version https://git-lfs.github.com/spec/v1
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oid sha256:a114da50d0673234cf6081ea1393ffb12587a6c589675e456ef520a5c8363d38
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size 96873672
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transforms.py
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import tensorflow as tf
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import numpy as np
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def normalize(image,label):
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return tf.cast(image, tf.float32) / 255., label
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def resize(image,label):
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return tf.image.resize(image,size=(100,100)), label
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def flip(image,label):
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new_label = tf.random.uniform(shape=(), minval=0, maxval=2, dtype=tf.int32)
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img = image
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if new_label == 1:
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img = tf.image.flip_up_down(img)
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return img,new_label
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utils.py
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import numpy as np
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import tensorflow as tf
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import matplotlib.pyplot as plt
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import gc
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classes = ["UN-FLIPPED","FLIPPED"]
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def showSample(data):
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for i,(image,label) in enumerate(data.unbatch().as_numpy_iterator()):
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print(classes[label])
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plt.imshow(image)
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plt.show()
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if i == 3:
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break
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tf.keras.backend.clear_session()
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gc.collect()
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def checkBalance(data):
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labels = []
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for i,(image,label) in enumerate(data.unbatch().as_numpy_iterator()):
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labels.append(label)
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values,count = np.unique(np.array(labels), return_counts=True)
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for i,value in enumerate(values):
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print(f"{classes[value]} : {count[i]}")
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tf.keras.backend.clear_session()
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gc.collect()
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def prepareData(data, transforms, batch_size, isTrain= False, size=None):
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ds = data
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for transform in transforms:
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ds = ds.map(transform)
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ds = ds.cache()
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ds = ds.batch(batch_size)
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ds = ds.prefetch(tf.data.AUTOTUNE)
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if isTrain:
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ds = ds.shuffle(size)
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return ds
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def train(data,classifier,params,optimizer,loss,epochs,modelName = "OrientationClassifier",callback = None, runs=3):
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train,val = data
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history = []
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losses = []
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accs = []
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callbacks = []
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if callback is not None:
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callbacks.append(callback)
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for i in range(runs):
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print(f"######## run {i+1} ##########")
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callbacks.append(tf.keras.callbacks.ModelCheckpoint(
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filepath=f"models/{modelName} run {(i+1)}",
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save_weights_only=True,
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monitor='val_loss',
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mode='min',
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save_best_only=True
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))
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model = classifier(*params)
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tf.random.set_seed(i+1)
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model.compile(optimizer=optimizer,loss=loss,metrics="accuracy")
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hist = model.fit(train,epochs=epochs,validation_data=val,callbacks=callbacks)
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losses.append(np.amin(hist.history["val_loss"]))
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accs.append(np.amax(hist.history["val_accuracy"]))
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history.append(hist)
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tf.keras.backend.clear_session()
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idx = np.argmin(losses)
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bestModel = model
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bestModel.load_weights(f"models/{modelName} run {(idx+1)}")
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loss,acc = bestModel.evaluate(val)
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print(f"best model is on run {idx+1} with validation loss : {loss} and validation accuracy : {acc}")
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del model
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tf.keras.backend.clear_session()
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gc.collect()
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return history
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def plotHistory(histories):
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for i,history in enumerate(histories):
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print(f"history on run {i+1} : ")
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| 123 |
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# summarize history for accuracy
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| 125 |
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plt.plot(history.history['accuracy'])
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| 126 |
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plt.plot(history.history['val_accuracy'])
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| 127 |
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plt.title('model accuracy')
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| 128 |
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plt.ylabel('accuracy')
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| 129 |
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plt.xlabel('epoch')
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| 130 |
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plt.legend(['train', 'val'], loc='upper left')
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| 131 |
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plt.show()
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| 132 |
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| 133 |
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# summarize history for loss
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| 134 |
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plt.plot(history.history['loss'])
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| 135 |
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plt.plot(history.history['val_loss'])
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| 136 |
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plt.title('model loss')
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| 137 |
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plt.ylabel('loss')
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| 138 |
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plt.xlabel('epoch')
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| 139 |
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plt.legend(['train', 'val'], loc='upper left')
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| 140 |
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plt.show()
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| 141 |
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| 143 |
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def getMetrics(true,preds,thresh=0.5):
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acc = 0
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| 147 |
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TP = 0
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| 148 |
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TN = 0
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| 149 |
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FP = 0
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| 150 |
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FN = 0
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| 151 |
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recall = 0
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| 152 |
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precision = 0
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| 153 |
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f1 = 0
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| 154 |
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| 155 |
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logits = np.array(preds>thresh,dtype = np.int)
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| 156 |
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| 157 |
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for i,label in enumerate(iter(true)):
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| 158 |
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| 159 |
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if label == 1:
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| 160 |
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if logits[i] == 1:
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| 161 |
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TP += 1
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| 162 |
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else:
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| 163 |
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FN += 1
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| 164 |
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else:
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| 165 |
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if logits[i] == 1:
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| 166 |
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FP += 1
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| 167 |
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else:
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| 168 |
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TN += 1
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| 169 |
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| 170 |
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confusion_matrix = [[TP,FN],[FP,TN]]
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| 171 |
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acc = (TP + TN)/(TP+TN+FP+FN)
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| 172 |
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recall = TP/(TP+FN)
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| 173 |
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precision = TP/(TP+FP)
|
| 174 |
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f1 = 2 * ((precision*recall)/(precision+recall))
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| 175 |
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| 176 |
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s = ""
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| 177 |
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for i in range(2):
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| 178 |
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for j in range(2):
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| 179 |
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s+=f"{confusion_matrix[i][j]}\t"
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| 180 |
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s+="\n"
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| 181 |
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| 182 |
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print(f"Accuracy : {acc} , recall : {recall} , precision : {precision} , f1 : {f1} , Confusion Matrix : \n{s}")
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| 183 |
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|
| 184 |
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return acc,confusion_matrix,recall,precision,f1
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| 185 |
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|
| 186 |
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|
| 187 |
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| 188 |
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def loadWeights(model,optimizer,loss,weights_path):
|
| 189 |
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|
| 190 |
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model.load_weights(weights_path)
|
| 191 |
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model.compile(optimizer = optimizer,loss = loss)
|
| 192 |
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|
| 193 |
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return model
|
| 194 |
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|
| 195 |
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|
| 196 |
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def evaluate(model,data):
|
| 197 |
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|
| 198 |
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images = data.map(lambda image,label:image)
|
| 199 |
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true = data.map(lambda image,label:label).unbatch()
|
| 200 |
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|
| 201 |
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preds = model.predict(images)
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| 202 |
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|
| 203 |
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return getMetrics(true,preds)
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