task2file-llm / trainer-kit /DPO /f1_score_utils.py
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"""
Utility for computing F1 scores at file level for ranking generated outputs.
This helps create preference pairs for DPO training.
"""
import json
import re
from typing import List, Set, Tuple, Dict
from pathlib import Path
def extract_files_from_selection(output_text: str) -> Set[str]:
"""
Extract file paths from ##SELECT section.
Expected format: modify::crates/path/to/file.rs::impl::ComponentName
Returns set of unique file paths.
"""
files = set()
# Find ##SELECT section
select_match = re.search(r'##SELECT\s*(.*?)<EOS>', output_text, re.DOTALL | re.IGNORECASE)
if not select_match:
return files
select_section = select_match.group(1)
# Extract file paths from each line
# Format: action::path::type::name
for line in select_section.strip().split('\n'):
line = line.strip()
if not line:
continue
# Split by :: and extract the file path (second component)
parts = line.split('::')
if len(parts) >= 2:
file_path = parts[1]
files.add(file_path)
return files
def compute_file_level_f1(predicted: str, ground_truth: str) -> Dict[str, float]:
"""
Compute F1 score based on file-level predictions.
Args:
predicted: Model output with ##SELECT section
ground_truth: Ground truth output with ##SELECT section
Returns:
Dictionary with precision, recall, f1 scores
"""
pred_files = extract_files_from_selection(predicted)
gt_files = extract_files_from_selection(ground_truth)
if len(gt_files) == 0:
# No ground truth files
if len(pred_files) == 0:
return {"precision": 1.0, "recall": 1.0, "f1": 1.0}
else:
return {"precision": 0.0, "recall": 1.0, "f1": 0.0}
if len(pred_files) == 0:
# No predicted files but have ground truth
return {"precision": 0.0, "recall": 0.0, "f1": 0.0}
# Calculate metrics
true_positives = len(pred_files & gt_files)
false_positives = len(pred_files - gt_files)
false_negatives = len(gt_files - pred_files)
precision = true_positives / (true_positives + false_positives) if (true_positives + false_positives) > 0 else 0.0
recall = true_positives / (true_positives + false_negatives) if (true_positives + false_negatives) > 0 else 0.0
f1 = 2 * (precision * recall) / (precision + recall) if (precision + recall) > 0 else 0.0
return {
"precision": precision,
"recall": recall,
"f1": f1,
"true_positives": true_positives,
"false_positives": false_positives,
"false_negatives": false_negatives,
"pred_files": list(pred_files),
"gt_files": list(gt_files),
}
def rank_outputs_by_f1(outputs: List[str], ground_truth: str) -> List[Tuple[str, float, Dict]]:
"""
Rank multiple outputs by their F1 scores compared to ground truth.
Args:
outputs: List of model outputs to rank
ground_truth: Ground truth output
Returns:
List of tuples: (output, f1_score, metrics_dict) sorted by F1 descending
"""
ranked = []
for output in outputs:
metrics = compute_file_level_f1(output, ground_truth)
ranked.append((output, metrics["f1"], metrics))
# Sort by F1 score descending
ranked.sort(key=lambda x: x[1], reverse=True)
return ranked
def create_dpo_pairs_from_generations(
prompt: str,
generations: List[str],
ground_truth: str,
min_f1_difference: float = 0.1
) -> List[Dict[str, str]]:
"""
Create DPO training pairs from multiple generations.
Uses F1 score to determine which generation is better.
Args:
prompt: Input prompt/task
generations: List of generated outputs
ground_truth: Ground truth output
min_f1_difference: Minimum F1 difference to create a pair
Returns:
List of DPO pairs: {"prompt": str, "chosen": str, "rejected": str}
"""
if len(generations) < 2:
return []
ranked = rank_outputs_by_f1(generations, ground_truth)
pairs = []
# Create pairs from ranked outputs
for i in range(len(ranked)):
for j in range(i + 1, len(ranked)):
better_output, better_f1, _ = ranked[i]
worse_output, worse_f1, _ = ranked[j]
# Only create pair if F1 difference is significant
if better_f1 - worse_f1 >= min_f1_difference:
pairs.append({
"prompt": prompt,
"chosen": better_output,
"rejected": worse_output,
"chosen_f1": better_f1,
"rejected_f1": worse_f1,
})
return pairs
def convert_sft_to_dpo_with_sampling(
sft_jsonl_path: str,
output_jsonl_path: str,
model_inference_fn,
num_samples: int = 4,
min_f1_difference: float = 0.1,
temperature: float = 0.8
):
"""
Convert SFT dataset to DPO dataset by sampling multiple outputs and ranking by F1.
Args:
sft_jsonl_path: Path to SFT JSONL file
output_jsonl_path: Path to output DPO JSONL file
model_inference_fn: Function that takes (prompt, num_samples, temperature) and returns List[str]
num_samples: Number of outputs to sample per prompt
min_f1_difference: Minimum F1 difference to create a pair
temperature: Sampling temperature
"""
pairs_created = 0
with open(sft_jsonl_path, 'r') as f_in, open(output_jsonl_path, 'w') as f_out:
for line in f_in:
data = json.loads(line)
# Extract prompt and ground truth
prompt = data.get("input", "")
ground_truth = data.get("output", "")
if not prompt or not ground_truth:
continue
# Generate multiple outputs
try:
generations = model_inference_fn(prompt, num_samples, temperature)
except Exception as e:
print(f"Error generating outputs: {e}")
continue
# Create DPO pairs
pairs = create_dpo_pairs_from_generations(
prompt, generations, ground_truth, min_f1_difference
)
# Write pairs to output
for pair in pairs:
f_out.write(json.dumps(pair) + '\n')
pairs_created += 1
print(f"Created {pairs_created} DPO pairs from {sft_jsonl_path}")
def prepare_dpo_data_from_instruct(
instruct_jsonl: str,
output_dpo_jsonl: str,
):
"""
Simple conversion from instruction data to DPO format.
This assumes you already have multiple outputs per input or will generate them.
For demonstration, this creates a basic structure. In practice, you need to:
1. Generate multiple outputs for each input
2. Rank them by F1 score
3. Create chosen/rejected pairs
"""
print(f"Converting {instruct_jsonl} to DPO format...")
print("Note: This requires generating multiple outputs per prompt.")
print("Use convert_sft_to_dpo_with_sampling() with your model for actual conversion.")
# Example structure - you'll need to fill this with actual generations
with open(instruct_jsonl, 'r') as f:
for line in f:
data = json.loads(line)
print(f"Input: {data.get('input', '')[:100]}...")
print(f"Ground truth output available: {len(data.get('output', ''))} chars")
print(" -> Need to generate multiple outputs and rank by F1 score")
print()
break # Just show one example
if __name__ == "__main__":
# Example usage
print("F1 Score Utility for File-Level Ranking")
print("=" * 50)
# Example 1: Compute F1 for two outputs
ground_truth = """
##OUTPUT
The webhook system requires subscription support.
##SELECT
crates/common_enums/src/enums.rs::EventClass
crates/router/src/webhooks.rs::process_webhook
<EOS>
"""
prediction1 = """
##OUTPUT
The webhook system requires subscription support.
##SELECT
crates/common_enums/src/enums.rs::EventClass
crates/router/src/webhooks.rs::process_webhook
<EOS>
"""
prediction2 = """
##OUTPUT
The webhook system requires subscription support.
##SELECT
crates/common_enums/src/enums.rs::EventClass
crates/router/src/handlers.rs::handle_request
<EOS>
"""
print("\nExample 1: Perfect match")
metrics1 = compute_file_level_f1(prediction1, ground_truth)
print(f"F1 Score: {metrics1['f1']:.3f}")
print(f"Precision: {metrics1['precision']:.3f}, Recall: {metrics1['recall']:.3f}")
print("\nExample 2: Partial match")
metrics2 = compute_file_level_f1(prediction2, ground_truth)
print(f"F1 Score: {metrics2['f1']:.3f}")
print(f"Precision: {metrics2['precision']:.3f}, Recall: {metrics2['recall']:.3f}")
print("\nExample 3: Ranking outputs")
outputs = [prediction1, prediction2]
ranked = rank_outputs_by_f1(outputs, ground_truth)
print("Ranked outputs:")
for i, (output, f1, metrics) in enumerate(ranked, 1):
print(f" {i}. F1={f1:.3f} - {metrics['true_positives']} correct files")