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vcf='/absolute_path_to_your_file/example.vcf'
samples='/absolute_path_to_your_files/hapmap-ceu-all.lift.vcf'
conform='/absolute_your_path/conform-gt.24May16.cee.jar'
beagle='/absolute_your_path/beagle.22Jul22.46e.jar'
ref='/absolute_your_path/reference'
maps='/absolute_your_path/maps'
gb=20 |