setup.sh

#!/bin/bash
# ==============================================================================
# Automated Environment Provisioning Script for Lab225 ResNet+LSTM Architecture
# Based on UIIP NASB Virtual Environment Deployment Guidelines
# ==============================================================================
set -e

echo "[1/5] Downloading and configuring Miniconda setup engine..."
mkdir -p ~/miniconda3
wget https://anaconda.com -O ~/miniconda3/miniconda.sh
bash ~/miniconda3/miniconda.sh -b -u -p ~/miniconda3
rm -rf ~/miniconda3/miniconda.sh

# Register Conda command tracking parameters into current terminal layer
eval "$(/home/$USER/miniconda3/bin/conda shell.bash hook)"

echo "[2/5] Creating isolated virtual sandbox env using Python 3.12..."
conda create --name lab225_env python=3.12 -y
conda activate lab225_env

echo "[3/5] Installing core PyTorch framework with CUDA runtime components..."
pip install --upgrade pip
pip install torch torchvision --index-url https://pytorch.org

echo "[4/5] Mounting Hugging Face transformers stack and production vision libraries..."
pip install transformers[torch] datasets huggingface_hub timm evaluate safetensors fastai
pip install matplotlib scipy numpy opencv-python pillow scikit-learn scikit-image pandas ipython jupyter tqdm graphviz
pip install nibabel pytest einops nltk albumentations

echo "[5/5] Launching infrastructure validation..."
if [ -f "predict.py" ]; then
    chmod +x predict.py
    echo "[SUCCESS] Core neural network architecture dependencies successfully loaded."
    echo "To execute automated inference evaluations, run the following terminal strings:"
    echo "  conda activate lab225_env"
    echo "  python predict.py --image data/14_4_154037.dcm_norm.png --top_p 0.1"
else
    echo "[WARNING] Environment initialized, but evaluation CLI script 'predict.py' is missing."
fi