Upload 10 files

config.json

@@ -0,0 +1,30 @@
+{
+  "_name_or_path": "facebook/esm2_t30_150M_UR50D",
+  "architectures": [
+    "EsmForMaskedLM"
+  ],
+  "attention_probs_dropout_prob": 0.0,
+  "classifier_dropout": null,
+  "emb_layer_norm_before": false,
+  "esmfold_config": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.0,
+  "hidden_size": 640,
+  "initializer_range": 0.02,
+  "intermediate_size": 2560,
+  "is_folding_model": false,
+  "layer_norm_eps": 1e-05,
+  "mask_token_id": 32,
+  "max_position_embeddings": 1026,
+  "model_type": "esm",
+  "num_attention_heads": 20,
+  "num_hidden_layers": 30,
+  "pad_token_id": 1,
+  "position_embedding_type": "rotary",
+  "token_dropout": true,
+  "torch_dtype": "float32",
+  "transformers_version": "4.42.3",
+  "use_cache": true,
+  "vocab_list": null,
+  "vocab_size": 33
+}

model.safetensors

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:d6ba4d71a812c105927020dd8aff8d74e45be6a85e265d775204a8e8d3694276
+size 595249400

optimizer.pt

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:8284446979e39209fd3ae1b1456572a29a226c37b368fa8c05b449c7dffcd2fb
+size 1185525322

rng_state.pth

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:b260d7c78d903417ccd15c6d9a4c8b6fe4fcf9670ca87a95c940cb594e83a109
+size 14244

scheduler.pt

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:6923632fef38472c44be2851ece58a12345893d12b58cd2a4290bcbf14e4e3e7
+size 1064

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "<cls>",
+  "eos_token": "<eos>",
+  "mask_token": "<mask>",
+  "pad_token": "<pad>",
+  "unk_token": "<unk>"
+}

tokenizer_config.json

@@ -0,0 +1,52 @@
+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "<cls>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "1": {
+      "content": "<pad>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "2": {
+      "content": "<eos>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "3": {
+      "content": "<unk>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "32": {
+      "content": "<mask>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "<cls>",
+  "eos_token": "<eos>",
+  "mask_token": "<mask>",
+  "model_max_length": 1000000000000000019884624838656,
+  "pad_token": "<pad>",
+  "tokenizer_class": "EsmTokenizer",
+  "unk_token": "<unk>"
+}

trainer_state.json

@@ -0,0 +1,100 @@
+{
+  "best_metric": null,
+  "best_model_checkpoint": null,
+  "epoch": 5.0,
+  "eval_steps": 500,
+  "global_step": 43750,
+  "is_hyper_param_search": false,
+  "is_local_process_zero": true,
+  "is_world_process_zero": true,
+  "log_history": [
+    {
+      "epoch": 1.0,
+      "grad_norm": 1.4176286458969116,
+      "learning_rate": 1.600137142857143e-05,
+      "loss": 2.6585,
+      "step": 8750
+    },
+    {
+      "epoch": 1.0,
+      "eval_loss": 2.657306671142578,
+      "eval_runtime": 127.3226,
+      "eval_samples_per_second": 235.622,
+      "eval_steps_per_second": 29.453,
+      "step": 8750
+    },
+    {
+      "epoch": 2.0,
+      "grad_norm": 1.0878936052322388,
+      "learning_rate": 1.2002285714285716e-05,
+      "loss": 2.6535,
+      "step": 17500
+    },
+    {
+      "epoch": 2.0,
+      "eval_loss": 2.653296947479248,
+      "eval_runtime": 139.0848,
+      "eval_samples_per_second": 215.696,
+      "eval_steps_per_second": 26.962,
+      "step": 17500
+    },
+    {
+      "epoch": 3.0,
+      "grad_norm": 1.0684641599655151,
+      "learning_rate": 8.00457142857143e-06,
+      "loss": 2.6505,
+      "step": 26250
+    },
+    {
+      "epoch": 3.0,
+      "eval_loss": 2.653186798095703,
+      "eval_runtime": 133.9609,
+      "eval_samples_per_second": 223.946,
+      "eval_steps_per_second": 27.993,
+      "step": 26250
+    },
+    {
+      "epoch": 4.0,
+      "grad_norm": 2.061199188232422,
+      "learning_rate": 4.0064e-06,
+      "loss": 2.6439,
+      "step": 35000
+    },
+    {
+      "epoch": 4.0,
+      "eval_loss": 2.6521787643432617,
+      "eval_runtime": 131.624,
+      "eval_samples_per_second": 227.922,
+      "eval_steps_per_second": 28.49,
+      "step": 35000
+    },
+    {
+      "epoch": 5.0,
+      "grad_norm": 1.321831226348877,
+      "learning_rate": 7.3142857142857155e-09,
+      "loss": 2.6401,
+      "step": 43750
+    }
+  ],
+  "logging_steps": 8750,
+  "max_steps": 43750,
+  "num_input_tokens_seen": 0,
+  "num_train_epochs": 5,
+  "save_steps": 500,
+  "stateful_callbacks": {
+    "TrainerControl": {
+      "args": {
+        "should_epoch_stop": false,
+        "should_evaluate": false,
+        "should_log": false,
+        "should_save": true,
+        "should_training_stop": true
+      },
+      "attributes": {}
+    }
+  },
+  "total_flos": 5333657398730976.0,
+  "train_batch_size": 8,
+  "trial_name": null,
+  "trial_params": null
+}

training_args.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:fc19761260cea9773d4cd42ffe0bd9c26f789398a1f24834476305c834edf36d
+size 5112

vocab.txt

@@ -0,0 +1,33 @@
+<cls>
+<pad>
+<eos>
+<unk>
+L
+A
+G
+V
+S
+E
+R
+T
+I
+D
+P
+K
+Q
+N
+F
+Y
+M
+H
+W
+C
+X
+B
+U
+Z
+O
+.
+-
+<null_1>
+<mask>