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vae/config.yaml

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+data: metadata/cell_lines_drug_compounds.csv
+data_root: /path/to/your/dataset
+experiment_name: microscopy_vae
+model:
+  base_channels: 64
+  cell_lines:
+  - ONS76
+  - UW228
+  in_channels: 3
+  latent_channels: 4
+  name: microscopy_vae
+preprocessing:
+  img_size: 256
+project_name: microscopy_vae
+training:
+  alpha_ssim: 0.6
+  batch_size: 32
+  beta: 1.0e-07
+  ema_decay: 0.999
+  epochs: 200
+  filtered_only: false
+  lam_rot: 0.0
+  learning_rate: 1e-4
+  log_interval: 5
+  target_concentrations:
+  - 0.0
+  - 0.065
+  - 0.125
+  - 0.25
+  - 0.5
+  - 1.0
+  warmup_ratio: 0.05
+  weight_decay: 1.0e-05