| """ |
| Testing that we work in the downstream packages |
| """ |
| import array |
| import subprocess |
| import sys |
|
|
| import numpy as np |
| import pytest |
|
|
| from pandas.errors import IntCastingNaNError |
| import pandas.util._test_decorators as td |
|
|
| import pandas as pd |
| from pandas import ( |
| DataFrame, |
| DatetimeIndex, |
| Series, |
| TimedeltaIndex, |
| ) |
| import pandas._testing as tm |
| from pandas.core.arrays import ( |
| DatetimeArray, |
| TimedeltaArray, |
| ) |
| from pandas.util.version import Version |
|
|
|
|
| @pytest.fixture |
| def df(): |
| return DataFrame({"A": [1, 2, 3]}) |
|
|
|
|
| def test_dask(df): |
| |
| |
| olduse = pd.get_option("compute.use_numexpr") |
|
|
| try: |
| pytest.importorskip("toolz") |
| dd = pytest.importorskip("dask.dataframe") |
|
|
| ddf = dd.from_pandas(df, npartitions=3) |
| assert ddf.A is not None |
| assert ddf.compute() is not None |
| finally: |
| pd.set_option("compute.use_numexpr", olduse) |
|
|
|
|
| def test_dask_ufunc(): |
| |
| |
| olduse = pd.get_option("compute.use_numexpr") |
|
|
| try: |
| da = pytest.importorskip("dask.array") |
| dd = pytest.importorskip("dask.dataframe") |
|
|
| s = Series([1.5, 2.3, 3.7, 4.0]) |
| ds = dd.from_pandas(s, npartitions=2) |
|
|
| result = da.fix(ds).compute() |
| expected = np.fix(s) |
| tm.assert_series_equal(result, expected) |
| finally: |
| pd.set_option("compute.use_numexpr", olduse) |
|
|
|
|
| def test_construct_dask_float_array_int_dtype_match_ndarray(): |
| |
| |
| dd = pytest.importorskip("dask.dataframe") |
|
|
| arr = np.array([1, 2.5, 3]) |
| darr = dd.from_array(arr) |
|
|
| res = Series(darr) |
| expected = Series(arr) |
| tm.assert_series_equal(res, expected) |
|
|
| |
| msg = "Trying to coerce float values to integers" |
| with pytest.raises(ValueError, match=msg): |
| Series(darr, dtype="i8") |
|
|
| msg = r"Cannot convert non-finite values \(NA or inf\) to integer" |
| arr[2] = np.nan |
| with pytest.raises(IntCastingNaNError, match=msg): |
| Series(darr, dtype="i8") |
| |
| with pytest.raises(IntCastingNaNError, match=msg): |
| Series(arr, dtype="i8") |
|
|
|
|
| def test_xarray(df): |
| pytest.importorskip("xarray") |
|
|
| assert df.to_xarray() is not None |
|
|
|
|
| def test_xarray_cftimeindex_nearest(): |
| |
| cftime = pytest.importorskip("cftime") |
| xarray = pytest.importorskip("xarray") |
|
|
| times = xarray.cftime_range("0001", periods=2) |
| key = cftime.DatetimeGregorian(2000, 1, 1) |
| result = times.get_indexer([key], method="nearest") |
| expected = 1 |
| assert result == expected |
|
|
|
|
| @pytest.mark.single_cpu |
| def test_oo_optimizable(): |
| |
| subprocess.check_call([sys.executable, "-OO", "-c", "import pandas"]) |
|
|
|
|
| @pytest.mark.single_cpu |
| def test_oo_optimized_datetime_index_unpickle(): |
| |
| subprocess.check_call( |
| [ |
| sys.executable, |
| "-OO", |
| "-c", |
| ( |
| "import pandas as pd, pickle; " |
| "pickle.loads(pickle.dumps(pd.date_range('2021-01-01', periods=1)))" |
| ), |
| ] |
| ) |
|
|
|
|
| def test_statsmodels(): |
| smf = pytest.importorskip("statsmodels.formula.api") |
|
|
| df = DataFrame( |
| {"Lottery": range(5), "Literacy": range(5), "Pop1831": range(100, 105)} |
| ) |
| smf.ols("Lottery ~ Literacy + np.log(Pop1831)", data=df).fit() |
|
|
|
|
| def test_scikit_learn(): |
| pytest.importorskip("sklearn") |
| from sklearn import ( |
| datasets, |
| svm, |
| ) |
|
|
| digits = datasets.load_digits() |
| clf = svm.SVC(gamma=0.001, C=100.0) |
| clf.fit(digits.data[:-1], digits.target[:-1]) |
| clf.predict(digits.data[-1:]) |
|
|
|
|
| def test_seaborn(): |
| seaborn = pytest.importorskip("seaborn") |
| tips = DataFrame( |
| {"day": pd.date_range("2023", freq="D", periods=5), "total_bill": range(5)} |
| ) |
| seaborn.stripplot(x="day", y="total_bill", data=tips) |
|
|
|
|
| def test_pandas_datareader(): |
| pytest.importorskip("pandas_datareader") |
|
|
|
|
| @pytest.mark.filterwarnings("ignore:Passing a BlockManager:DeprecationWarning") |
| def test_pyarrow(df): |
| pyarrow = pytest.importorskip("pyarrow") |
| table = pyarrow.Table.from_pandas(df) |
| result = table.to_pandas() |
| tm.assert_frame_equal(result, df) |
|
|
|
|
| def test_yaml_dump(df): |
| |
| yaml = pytest.importorskip("yaml") |
|
|
| dumped = yaml.dump(df) |
|
|
| loaded = yaml.load(dumped, Loader=yaml.Loader) |
| tm.assert_frame_equal(df, loaded) |
|
|
| loaded2 = yaml.load(dumped, Loader=yaml.UnsafeLoader) |
| tm.assert_frame_equal(df, loaded2) |
|
|
|
|
| @pytest.mark.single_cpu |
| def test_missing_required_dependency(): |
| |
| |
| |
| |
| |
| |
|
|
| pyexe = sys.executable.replace("\\", "/") |
|
|
| |
| |
| |
| call = [pyexe, "-c", "import pandas;print(pandas.__file__)"] |
| output = subprocess.check_output(call).decode() |
| if "site-packages" in output: |
| pytest.skip("pandas installed as site package") |
|
|
| |
| |
| |
| call = [pyexe, "-sSE", "-c", "import pandas"] |
|
|
| msg = ( |
| rf"Command '\['{pyexe}', '-sSE', '-c', 'import pandas'\]' " |
| "returned non-zero exit status 1." |
| ) |
|
|
| with pytest.raises(subprocess.CalledProcessError, match=msg) as exc: |
| subprocess.check_output(call, stderr=subprocess.STDOUT) |
|
|
| output = exc.value.stdout.decode() |
| for name in ["numpy", "pytz", "dateutil"]: |
| assert name in output |
|
|
|
|
| def test_frame_setitem_dask_array_into_new_col(request): |
| |
|
|
| |
| |
| olduse = pd.get_option("compute.use_numexpr") |
|
|
| try: |
| dask = pytest.importorskip("dask") |
| da = pytest.importorskip("dask.array") |
| if Version(dask.__version__) <= Version("2025.1.0") and Version( |
| np.__version__ |
| ) >= Version("2.1"): |
| request.applymarker( |
| pytest.mark.xfail(reason="loc.__setitem__ incorrectly mutated column c") |
| ) |
|
|
| dda = da.array([1, 2]) |
| df = DataFrame({"a": ["a", "b"]}) |
| df["b"] = dda |
| df["c"] = dda |
| df.loc[[False, True], "b"] = 100 |
| result = df.loc[[1], :] |
| expected = DataFrame({"a": ["b"], "b": [100], "c": [2]}, index=[1]) |
| tm.assert_frame_equal(result, expected) |
| finally: |
| pd.set_option("compute.use_numexpr", olduse) |
|
|
|
|
| def test_pandas_priority(): |
| |
|
|
| class MyClass: |
| __pandas_priority__ = 5000 |
|
|
| def __radd__(self, other): |
| return self |
|
|
| left = MyClass() |
| right = Series(range(3)) |
|
|
| assert right.__add__(left) is NotImplemented |
| assert right + left is left |
|
|
|
|
| @pytest.fixture( |
| params=[ |
| "memoryview", |
| "array", |
| pytest.param("dask", marks=td.skip_if_no("dask.array")), |
| pytest.param("xarray", marks=td.skip_if_no("xarray")), |
| ] |
| ) |
| def array_likes(request): |
| """ |
| Fixture giving a numpy array and a parametrized 'data' object, which can |
| be a memoryview, array, dask or xarray object created from the numpy array. |
| """ |
| |
| arr = np.array([1, 2, 3], dtype=np.int64) |
|
|
| name = request.param |
| if name == "memoryview": |
| data = memoryview(arr) |
| elif name == "array": |
| data = array.array("i", arr) |
| elif name == "dask": |
| import dask.array |
|
|
| data = dask.array.array(arr) |
| elif name == "xarray": |
| import xarray as xr |
|
|
| data = xr.DataArray(arr) |
|
|
| return arr, data |
|
|
|
|
| @pytest.mark.parametrize("dtype", ["M8[ns]", "m8[ns]"]) |
| def test_from_obscure_array(dtype, array_likes): |
| |
| |
| |
| |
| arr, data = array_likes |
|
|
| cls = {"M8[ns]": DatetimeArray, "m8[ns]": TimedeltaArray}[dtype] |
|
|
| depr_msg = f"{cls.__name__}.__init__ is deprecated" |
| with tm.assert_produces_warning(FutureWarning, match=depr_msg): |
| expected = cls(arr) |
| result = cls._from_sequence(data, dtype=dtype) |
| tm.assert_extension_array_equal(result, expected) |
|
|
| if not isinstance(data, memoryview): |
| |
| |
| func = {"M8[ns]": pd.to_datetime, "m8[ns]": pd.to_timedelta}[dtype] |
| result = func(arr).array |
| expected = func(data).array |
| tm.assert_equal(result, expected) |
|
|
| |
| idx_cls = {"M8[ns]": DatetimeIndex, "m8[ns]": TimedeltaIndex}[dtype] |
| result = idx_cls(arr) |
| expected = idx_cls(data) |
| tm.assert_index_equal(result, expected) |
|
|
|
|
| def test_dataframe_consortium() -> None: |
| """ |
| Test some basic methods of the dataframe consortium standard. |
| |
| Full testing is done at https://github.com/data-apis/dataframe-api-compat, |
| this is just to check that the entry point works as expected. |
| """ |
| pytest.importorskip("dataframe_api_compat") |
| df_pd = DataFrame({"a": [1, 2, 3], "b": [4, 5, 6]}) |
| df = df_pd.__dataframe_consortium_standard__() |
| result_1 = df.get_column_names() |
| expected_1 = ["a", "b"] |
| assert result_1 == expected_1 |
|
|
| ser = Series([1, 2, 3], name="a") |
| col = ser.__column_consortium_standard__() |
| assert col.name == "a" |
|
|
|
|
| def test_xarray_coerce_unit(): |
| |
| xr = pytest.importorskip("xarray") |
|
|
| arr = xr.DataArray([1, 2, 3]) |
| result = pd.to_datetime(arr, unit="ns") |
| expected = DatetimeIndex( |
| [ |
| "1970-01-01 00:00:00.000000001", |
| "1970-01-01 00:00:00.000000002", |
| "1970-01-01 00:00:00.000000003", |
| ], |
| dtype="datetime64[ns]", |
| freq=None, |
| ) |
| tm.assert_index_equal(result, expected) |
|
|