PTM_small / config.json
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{
"architectures": [
"FastEsmForMaskedLM"
],
"attention_probs_dropout_prob": 0.0,
"attn_backend": "sdpa",
"auto_map": {
"AutoConfig": "Synthyra/ESM2-8M--modeling_fastesm.FastEsmConfig",
"AutoModel": "Synthyra/ESM2-8M--modeling_fastesm.FastEsmModel",
"AutoModelForMaskedLM": "Synthyra/ESM2-8M--modeling_fastesm.FastEsmForMaskedLM",
"AutoModelForSequenceClassification": "Synthyra/ESM2-8M--modeling_fastesm.FastEsmForSequenceClassification",
"AutoModelForTokenClassification": "Synthyra/ESM2-8M--modeling_fastesm.FastEsmForTokenClassification"
},
"classifier_dropout": null,
"dtype": "float32",
"emb_layer_norm_before": false,
"esmfold_config": null,
"hidden_act": "gelu",
"hidden_dropout_prob": 0.0,
"hidden_size": 320,
"id2label": {
"0": "None",
"1": "Phosphorylation",
"2": "Acetylation/Acylation",
"3": "Methylation",
"4": "Glycosylation",
"5": "Lipidation",
"6": "Other rare PTMs"
},
"initializer_range": 0.02,
"intermediate_size": 1280,
"is_folding_model": false,
"label2id": {
"Acetylation/Acylation": "2",
"Glycosylation": "4",
"Lipidation": "5",
"Methylation": "3",
"None": "0",
"Other rare PTMs": "6",
"Phosphorylation": "1"
},
"layer_norm_eps": 1e-05,
"mask_token_id": 32,
"max_position_embeddings": 1026,
"model_type": "esm",
"num_attention_heads": 20,
"num_hidden_layers": 6,
"pad_token_id": 1,
"position_embedding_type": "rotary",
"tie_word_embeddings": false,
"token_dropout": true,
"transformers_version": "4.48.3",
"use_cache": true,
"vocab_list": null,
"vocab_size": 33
}