UvmPinAsync / workloads /micro /async /3DCONV /3DConvolution.cu
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first commit
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/**
* 3DConvolution.cu: This file is part of the PolyBench/GPU 1.0 test suite.
*
*
* Contact: Scott Grauer-Gray <sgrauerg@gmail.com>
* Louis-Noel Pouchet <pouchet@cse.ohio-state.edu>
* Web address: http://www.cse.ohio-state.edu/~pouchet/software/polybench/GPU
*/
#include <unistd.h>
#include <stdio.h>
#include <time.h>
#include <sys/time.h>
#include <stdlib.h>
#include <stdarg.h>
#include <string.h>
#include <cuda.h>
#include "../../../common/cupti_add.h"
#include "../../../common/cpu_timestamps.h"
#include <cooperative_groups.h>
#include <cooperative_groups/memcpy_async.h>
using namespace nvcuda::experimental;
#define PREFETCH_COUNT 2
#define SMALL_FLOAT_VAL 0.00000001f
double rtclock()
{
struct timezone Tzp;
struct timeval Tp;
uint64_t stat;
stat = gettimeofday(&Tp, &Tzp);
if (stat != 0)
printf("Error return from gettimeofday: %d", stat);
return (Tp.tv_sec + Tp.tv_usec * 1.0e-6);
}
float absVal(float a)
{
if (a < 0)
{
return (a * -1);
}
else
{
return a;
}
}
float percentDiff(double val1, double val2)
{
if ((absVal(val1) < 0.01) && (absVal(val2) < 0.01))
{
return 0.0f;
}
else
{
return 100.0f * (absVal(absVal(val1 - val2) / absVal(val1 + SMALL_FLOAT_VAL)));
}
}
// define the error threshold for the results "not matching"
#define PERCENT_DIFF_ERROR_THRESHOLD 0.05
/* Problem size */
#define SIZE 4096
#define NBLOCKS 2
#define BATCH_SIZE 3
uint64_t NI;
uint64_t NJ;
uint64_t NK;
uint64_t nblocks;
/* Thread block dimensions */
#define DIM_THREAD_BLOCK 4
#define KERNEL 3
/* Can switch DATA_TYPE between float and double */
typedef float DATA_TYPE;
void conv3D(DATA_TYPE* A, DATA_TYPE* B)
{
uint64_t i, j, k;
DATA_TYPE c11, c12, c13, c21, c22, c23, c31, c32, c33;
c11 = +2; c21 = +5; c31 = -8;
c12 = -3; c22 = +6; c32 = -9;
c13 = +4; c23 = +7; c33 = +10;
for (i = 1; i < NI - 1; ++i) // 0
{
for (j = 1; j < NJ - 1; ++j) // 1
{
for (k = 1; k < NK -1; ++k) // 2
{
B[i*(NK * NJ) + j*NK + k] = c11 * A[(i - 1)*(NK * NJ) + (j - 1)*NK + (k - 1)] + c13 * A[(i + 1)*(NK * NJ) + (j - 1)*NK + (k - 1)]
+ c21 * A[(i - 1)*(NK * NJ) + (j - 1)*NK + (k - 1)] + c23 * A[(i + 1)*(NK * NJ) + (j - 1)*NK + (k - 1)]
+ c31 * A[(i - 1)*(NK * NJ) + (j - 1)*NK + (k - 1)] + c33 * A[(i + 1)*(NK * NJ) + (j - 1)*NK + (k - 1)]
+ c12 * A[(i + 0)*(NK * NJ) + (j - 1)*NK + (k + 0)] + c22 * A[(i + 0)*(NK * NJ) + (j + 0)*NK + (k + 0)]
+ c32 * A[(i + 0)*(NK * NJ) + (j + 1)*NK + (k + 0)] + c11 * A[(i - 1)*(NK * NJ) + (j - 1)*NK + (k + 1)]
+ c13 * A[(i + 1)*(NK * NJ) + (j - 1)*NK + (k + 1)] + c21 * A[(i - 1)*(NK * NJ) + (j + 0)*NK + (k + 1)]
+ c23 * A[(i + 1)*(NK * NJ) + (j + 0)*NK + (k + 1)] + c31 * A[(i - 1)*(NK * NJ) + (j + 1)*NK + (k + 1)]
+ c33 * A[(i + 1)*(NK * NJ) + (j + 1)*NK + (k + 1)];
}
}
}
}
void initGPU(DATA_TYPE *A_gpu)
{
uint64_t i, j, k;
for (i = 0; i < NI; ++i)
{
for (j = 0; j < NJ; ++j)
{
for (k = 0; k < NK; ++k)
{
A_gpu[i * (NK * NJ) + j * NK + k] = i % 12 + 2 * (j % 7) + 3 * (k % 13);
}
}
}
}
void initCPU(DATA_TYPE *A)
{
uint64_t i, j, k;
for (i = 0; i < NI; ++i)
{
for (j = 0; j < NJ; ++j)
{
for (k = 0; k < NK; ++k)
{
A[i*(NK * NJ) + j*NK + k] = i % 12 + 2 * (j % 7) + 3 * (k % 13);
}
}
}
}
void compareResults(DATA_TYPE* B, DATA_TYPE* B_outputFromGpu)
{
uint64_t i, j, k, fail;
fail = 0;
// Compare result from cpu and gpu...
for (i = 1; i < NI - 1; ++i) // 0
{
for (j = 1; j < NJ - 1; ++j) // 1
{
for (k = 1; k < NK - 1; ++k) // 2
{
if (percentDiff(B[i*(NK * NJ) + j*NK + k], B_outputFromGpu[i*(NK * NJ) + j*NK + k]) > PERCENT_DIFF_ERROR_THRESHOLD)
{
printf("%d, %d, %d, CPU is %f, GPU is %f.\n", i, j, k, B[i * (NK * NJ) + j * NK + k], B_outputFromGpu[i * (NK * NJ) + j * NK + k]);
fail++;
}
}
}
}
// Print results
printf("Non-Matching CPU-GPU Outputs Beyond Error Threshold of %4.2f Percent: %d\n", PERCENT_DIFF_ERROR_THRESHOLD, fail);
}
__global__ void convolution3D_kernel(DATA_TYPE *A, DATA_TYPE *B, uint64_t NI, uint64_t NJ, uint64_t NK, uint64_t block_size)
{
cooperative_groups::thread_block block = cooperative_groups::this_thread_block();
pipeline pipe;
DATA_TYPE c11, c12, c13, c21, c22, c23, c31, c32, c33;
c11 = +2;
c21 = +5;
c31 = -8;
c12 = -3;
c22 = +6;
c32 = -9;
c13 = +4;
c23 = +7;
c33 = +10;
uint64_t tile_dim_x = (NJ + DIM_THREAD_BLOCK - 1) / (DIM_THREAD_BLOCK * BATCH_SIZE);
__shared__ DATA_TYPE tmp_A[PREFETCH_COUNT][DIM_THREAD_BLOCK * BATCH_SIZE + KERNEL - 1][DIM_THREAD_BLOCK * BATCH_SIZE + KERNEL - 1][DIM_THREAD_BLOCK * BATCH_SIZE + KERNEL - 1];
__shared__ DATA_TYPE tmp_B[DIM_THREAD_BLOCK * BATCH_SIZE][DIM_THREAD_BLOCK * BATCH_SIZE][DIM_THREAD_BLOCK * BATCH_SIZE];
// uint64_t total_tiles = tile_dim_x * tile_dim_x * tile_dim_x;
uint64_t tiles_this_block_x = (block_size / (DIM_THREAD_BLOCK * BATCH_SIZE));
uint64_t tiles_this_block = tiles_this_block_x * tiles_this_block_x * tiles_this_block_x;
uint64_t base_tile = (blockIdx.z * gridDim.y * gridDim.x + blockIdx.y * gridDim.x + blockIdx.x) * tiles_this_block;
uint64_t fetch = base_tile;
uint64_t end_tile = fetch + tiles_this_block;
// printf("block_size is %d, tile_dim_x is %d, tiles_this_block_x is %d.\n", block_size, tile_dim_x, tiles_this_block_x);
for (uint64_t compute = fetch; compute < end_tile; compute++)
{
for (; fetch < end_tile && fetch < compute + PREFETCH_COUNT; fetch++)
{
// block id
uint64_t offset = fetch - base_tile;
uint64_t block_id = fetch / tiles_this_block;
uint64_t bz = block_id / (gridDim.y * gridDim.x) * tiles_this_block_x + offset / (tiles_this_block_x * tiles_this_block_x);
uint64_t by = block_id % (gridDim.y * gridDim.x) / gridDim.x * tiles_this_block_x + offset % (tiles_this_block_x * tiles_this_block_x) / tiles_this_block_x;
uint64_t bx = block_id % (gridDim.y * gridDim.x) % gridDim.x * tiles_this_block_x + offset % (tiles_this_block_x * tiles_this_block_x) % tiles_this_block_x;
// thread id
uint64_t tx = threadIdx.x;
uint64_t ty = threadIdx.y;
uint64_t tz = threadIdx.z;
uint64_t index_A_z = DIM_THREAD_BLOCK * BATCH_SIZE * bz + BATCH_SIZE * tz;
uint64_t index_A_y = DIM_THREAD_BLOCK * BATCH_SIZE * by + BATCH_SIZE * ty;
uint64_t index_A_x = DIM_THREAD_BLOCK * BATCH_SIZE * bx + BATCH_SIZE * tx;
uint64_t index_A_z_start = DIM_THREAD_BLOCK * BATCH_SIZE * bz;
uint64_t index_A_y_start = DIM_THREAD_BLOCK * BATCH_SIZE * by;
uint64_t index_A_x_start = DIM_THREAD_BLOCK * BATCH_SIZE * bx;
uint64_t index_A_z_bound = DIM_THREAD_BLOCK * BATCH_SIZE * bz + BATCH_SIZE * DIM_THREAD_BLOCK;
uint64_t index_A_y_bound = DIM_THREAD_BLOCK * BATCH_SIZE * by + BATCH_SIZE * DIM_THREAD_BLOCK;
uint64_t index_A_x_bound = DIM_THREAD_BLOCK * BATCH_SIZE * bx + BATCH_SIZE * DIM_THREAD_BLOCK;
// fetch A
for (uint64_t i = 0; i < BATCH_SIZE; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE; k++)
{
if ((index_A_z + i) < NI && (index_A_y + j) < NJ && (index_A_x + k) < NK)
{
memcpy_async(tmp_A[fetch % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k], A[(index_A_z + i) * NJ * NK + (index_A_y + j) * NK + index_A_x + k], pipe);
}
}
}
}
// fetch A -- padding
for (uint64_t i = 0; i < KERNEL - 1; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; k++)
{
if ((index_A_z_bound + i) < NI && (index_A_y_start + j) < NJ && (index_A_x_start + k) < NK)
{
memcpy_async(tmp_A[fetch % PREFETCH_COUNT][DIM_THREAD_BLOCK * BATCH_SIZE + i][j][k], A[(index_A_z_bound + i) * NJ * NK + (index_A_y_start + j) * NK + index_A_x_start + k], pipe);
}
}
}
}
// fetch A -- padding
for (uint64_t i = 0; i < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; i++)
{
for (uint64_t j = 0; j < KERNEL - 1; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; k++)
{
if ((index_A_z_start + i) < NI && (index_A_y_bound + j) < NJ && (index_A_x_start + k) < NK)
{
memcpy_async(tmp_A[fetch % PREFETCH_COUNT][i][DIM_THREAD_BLOCK * BATCH_SIZE + j][k], A[(index_A_z_start + i) * NJ * NK + (index_A_y_bound + j) * NK + index_A_x_start + k], pipe);
}
}
}
}
// fetch A -- padding
for (uint64_t i = 0; i < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE * DIM_THREAD_BLOCK + KERNEL - 1; j++)
{
for (uint64_t k = 0; k < KERNEL - 1; k++)
{
if ((index_A_z_start + i) < NI && (index_A_y_start + j) < NJ && (index_A_x_bound + k) < NK)
{
memcpy_async(tmp_A[fetch % PREFETCH_COUNT][i][j][DIM_THREAD_BLOCK * BATCH_SIZE + k], A[(index_A_z_start + i) * NJ * NK + (index_A_y_start + j) * NK + index_A_x_bound + k], pipe);
}
}
}
}
pipe.commit();
}
if (fetch == end_tile)
{
for (uint64_t i = 0; i < PREFETCH_COUNT - 1; ++i)
{
pipe.commit();
}
++fetch;
}
pipe.wait_prior<PREFETCH_COUNT - 1>();
block.sync();
// block id
uint64_t offset = compute - base_tile;
uint64_t block_id = compute / tiles_this_block;
uint64_t bz = block_id / (gridDim.y * gridDim.x) * tiles_this_block_x + offset / (tiles_this_block_x * tiles_this_block_x);
uint64_t by = block_id % (gridDim.y * gridDim.x) / gridDim.x * tiles_this_block_x + offset % (tiles_this_block_x * tiles_this_block_x) / tiles_this_block_x;
uint64_t bx = block_id % (gridDim.y * gridDim.x) % gridDim.x * tiles_this_block_x + offset % (tiles_this_block_x * tiles_this_block_x) % tiles_this_block_x;
// thread id
uint64_t tx = threadIdx.x;
uint64_t ty = threadIdx.y;
uint64_t tz = threadIdx.z;
uint64_t index_B_z = DIM_THREAD_BLOCK * BATCH_SIZE * bz + BATCH_SIZE * tz + 1;
uint64_t index_B_y = DIM_THREAD_BLOCK * BATCH_SIZE * by + BATCH_SIZE * ty + 1;
uint64_t index_B_x = DIM_THREAD_BLOCK * BATCH_SIZE * bx + BATCH_SIZE * tx + 1;
// Computation
for (uint64_t i = 0; i < BATCH_SIZE; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE; k++)
{
tmp_B[tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] = 0;
}
}
}
block.sync();
for (uint64_t i = 0; i < BATCH_SIZE; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE; k++)
{
tmp_B[tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] =
c11 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c13 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c21 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c23 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c31 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c33 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k] + c12 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 1][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k + 1] + c22 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 1][ty * BATCH_SIZE + j + 1][tx * BATCH_SIZE + k + 1] + c32 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 1][ty * BATCH_SIZE + j + 2][tx * BATCH_SIZE + k + 1] + c11 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k + 2] + c13 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k + 2] + c21 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j + 1][tx * BATCH_SIZE + k + 2] + c23 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j + 1][tx * BATCH_SIZE + k + 2] + c31 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i][ty * BATCH_SIZE + j + 2][tx * BATCH_SIZE + k + 2] + c33 * tmp_A[compute % PREFETCH_COUNT][tz * BATCH_SIZE + i + 2][ty * BATCH_SIZE + j + 2][tx * BATCH_SIZE + k + 2];
}
}
}
block.sync();
// Store B
for (uint64_t i = 0; i < BATCH_SIZE; i++)
{
for (uint64_t j = 0; j < BATCH_SIZE; j++)
{
for (uint64_t k = 0; k < BATCH_SIZE; k++)
{
if ((index_B_z + i + 1) < NI && (index_B_y + j + 1) < NJ && (index_B_x + k + 1) < NK)
{
B[(index_B_z + i) * NJ * NK + (index_B_y + j) * NK + index_B_x + k] = tmp_B[tz * BATCH_SIZE + i][ty * BATCH_SIZE + j][tx * BATCH_SIZE + k];
}
}
}
}
block.sync();
}
}
void convolution3DCuda(DATA_TYPE* A, DATA_TYPE* B, DATA_TYPE* A_gpu, DATA_TYPE* B_gpu)
{
double t_start, t_end;
dim3 block(DIM_THREAD_BLOCK, DIM_THREAD_BLOCK, DIM_THREAD_BLOCK);
dim3 grid(nblocks, nblocks, nblocks);
uint64_t block_size = (NI + (nblocks - 1)) / nblocks;
// t_start = rtclock();
cudaMemcpy(A_gpu, A, sizeof(DATA_TYPE) * NI * NJ * NK, cudaMemcpyHostToDevice);
convolution3D_kernel<<<grid, block>>>(A_gpu, B_gpu, NI, NJ, NK, block_size);
cudaDeviceSynchronize();
cudaMemcpy(B, B_gpu, sizeof(DATA_TYPE) * NI * NJ * NK, cudaMemcpyDeviceToHost);
// t_end = rtclock();
// fprintf(stdout, "GPU Runtime: %0.6lfs\n", t_end - t_start);
}
int main(int argc, char *argv[])
{
uint64_t start_tsc = rdtsc();
uint64_t start_tsp = rdtsp();
printf("start_tsc %lu start_tsp %lu\n", start_tsc, start_tsp);
if (argc >= 5) {
NI = atoll(argv[1]);
NJ = atoll(argv[2]);
NK = atoll(argv[3]);
nblocks = atoi(argv[4]);
} else {
NI = SIZE;
NJ = SIZE;
NK = SIZE;
nblocks = NBLOCKS;
}
double t_start, t_end;
DATA_TYPE* A;
DATA_TYPE* B;
DATA_TYPE *B_ref;
DATA_TYPE *A_gpu;
DATA_TYPE *B_gpu;
A = (DATA_TYPE*)malloc(NI*NJ*NK*sizeof(DATA_TYPE));
B = (DATA_TYPE*)malloc(NI*NJ*NK*sizeof(DATA_TYPE));
B_ref = (DATA_TYPE*)malloc(NI*NJ*NK*sizeof(DATA_TYPE));
initCPU(A);
GPU_argv_init();
initTrace();
startCPU();
cudaMalloc(&A_gpu, sizeof(DATA_TYPE) * NI * NJ * NK);
cudaMalloc(&B_gpu, sizeof(DATA_TYPE) * NI * NJ * NK);
// initGPU(A_gpu);
convolution3DCuda(A, B, A_gpu, B_gpu);
cudaFree(A_gpu);
cudaFree(B_gpu);
endCPU();
finiTrace();
// t_start = rtclock();
// conv3D(A, B_ref);
// t_end = rtclock();
// fprintf(stdout, "CPU Runtime: %0.6lfs\n", t_end - t_start);
// compareResults(B, B_ref);
free(A);
free(B);
return 0;
}