app.py

# app.py
import os
import gradio as gr
import torch
import requests
from transformers import pipeline, AutoModelForTokenClassification, AutoTokenizer
from monai.networks.nets import DenseNet121
import torchxrayvision as xrv

# Configuration
DEEPSEEK_API_URL = "https://api.deepseek.com/v1/chat/completions"
DEEPSEEK_API_KEY = os.getenv("DEEPSEEK_API_KEY")  # Set in Hugging Face secrets

DISCLAIMER = """
<div style="color: red; border: 2px solid red; padding: 15px; margin: 10px;">
⚠️ WARNING: This is a prototype demonstration only. NOT ACTUAL MEDICAL ADVICE. 
DO NOT USE FOR REAL HEALTH DECISIONS. CONSULT LICENSED PROFESSIONALS.
</div>
"""

class MedicalAssistant:
    def __init__(self):
        # Medical imaging models
        self.medical_models = self._init_imaging_models()
        
        # Clinical text processing
        self.prescription_parser = pipeline(
            "token-classification", 
            model="obi/deid_bert_i2b2",
            tokenizer="obi/deid_bert_i2b2"
        )
        
        # Safety systems
        self.safety_filter = pipeline(
            "text-classification", 
            model="Hate-speech-CNERG/dehatebert-mono-english"
        )

    def _init_imaging_models(self):
        """Initialize medical imaging models"""
        return {
            "xray": xrv.models.DenseNet(weights="densenet121-res224-all"),
            "ct": DenseNet121(spatial_dims=3, in_channels=1, out_channels=14),
            "histo": torch.hub.load('pytorch/vision', 'resnet50', pretrained=True)
        }

    def query_deepseek(self, prompt: str):
        """Query DeepSeek medical research API"""
        headers = {
            "Content-Type": "application/json",
            "Authorization": f"Bearer {DEEPSEEK_API_KEY}"
        }
        
        payload = {
            "model": "deepseek-medical-1.0",
            "messages": [{
                "role": "user",
                "content": f"MEDICAL PROMPT: {prompt}\nRespond with latest research-supported information. Cite sources."
            }],
            "temperature": 0.2,
            "max_tokens": 500
        }

        try:
            response = requests.post(DEEPSEEK_API_URL, json=payload, headers=headers)
            response.raise_for_status()
            return response.json()['choices'][0]['message']['content']
        except Exception as e:
            return f"API Error: {str(e)}"

    def analyze_image(self, image_path: str, modality: str):
        """Medical image analysis"""
        try:
            img = self._preprocess_image(image_path, modality)
            
            if modality == "xray":
                output = self.medical_models["xray"](img)
                return xrv.datasets.default_pathologies[torch.argmax(output)]
            elif modality == "ct":
                output = self.medical_models["ct"](img)
                return "CT analysis placeholder"
            elif modality == "histo":
                output = self.medical_models["histo"](img)
                return "Histopathology analysis placeholder"
        except Exception as e:
            return f"Image analysis error: {str(e)}"

    def parse_prescription(self, text: str):
        """Clinical text parsing"""
        entities = self.prescription_parser(text)
        return {
            "medications": [ent for ent in entities if ent['entity'] == 'MEDICATION'],
            "dosage": [ent for ent in entities if ent['entity'] == 'DOSAGE']
        }

    def generate_response(self, query: str, context: dict):
        """Generate safe, research-backed response"""
        # Construct enhanced prompt
        research_prompt = f"""
        Medical Query: {query}
        Context:
        - Image Findings: {context.get('image_analysis', 'N/A')}
        - Prescription Data: {context.get('prescription', 'N/A')}
        
        Requirements:
        1. Provide evidence-based medical information
        2. Cite recent research (post-2020 when possible)
        3. Include safety considerations
        4. Note confidence level
        """
        
        # Get DeepSeek research response
        raw_response = self.query_deepseek(research_prompt)
        
        # Apply safety filters
        if self._is_unsafe(raw_response):
            return "I cannot provide advice on this matter. Please consult a healthcare professional."
            
        return self._add_disclaimer(raw_response)

    def _is_unsafe(self, text: str):
        """Content safety check"""
        return self.safety_filter(text)[0]['label'] == 'HATE'

    def _add_disclaimer(self, text: str):
        """Add legal disclaimer to response"""
        return f"{text}\n\n---\n⚠️ This information is for research purposes only. Not medical advice."

    def _preprocess_image(self, image_path: str, modality: str):
        """Image preprocessing placeholder"""
        return torch.rand((1, 224, 224))

# Initialize system
assistant = MedicalAssistant()

def process_input(query, image, prescription):
    context = {}
    
    if image is not None:
        context["image_analysis"] = assistant.analyze_image(image, "xray")
    
    if prescription:
        context["prescription"] = assistant.parse_prescription(prescription)
    
    return assistant.generate_response(query, context)

# Gradio interface
interface = gr.Interface(
    fn=process_input,
    inputs=[
        gr.Textbox(label="Medical Query", placeholder="Enter your medical question..."),
        gr.Image(label="Medical Imaging", type="filepath"),
        gr.Textbox(label="Prescription Text")
    ],
    outputs=gr.Textbox(label="Research-Backed Response"),
    title="AI Medical Research Assistant",
    description=DISCLAIMER,
    allow_flagging="never"
)

interface.launch() make a requirements and readme file for this code for huggins face