FAMA-Astro / models_mae.py
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import torch
import torch.nn as nn
from functools import partial
from timm.models.vision_transformer import PatchEmbed, Block
from util.pos_embed import get_2d_sincos_pos_embed
class MaskedAutoEncoderViT(nn.Module):
""" Masked Autoencoder with VisionTransformer backbone
"""
def __init__(self, img_size=224, patch_size=16, in_chans=3,
embed_dim=1024, depth=24, num_heads=16,
decoder_embed_dim=512, decoder_depth=8, decoder_num_heads=16,
mlp_ratio=4.0, norm_layer=nn.LayerNorm, norm_pix_loss=False):
super().__init__()
self.patch_embed = PatchEmbed(img_size, patch_size, in_chans, embed_dim)
num_patches = self.patch_embed.num_patches
self.cls_token = nn.Parameter(torch.zeros(1, 1, embed_dim))
self.pos_embed = nn.Parameter(torch.zeros(1, num_patches + 1, embed_dim), requires_grad=False) # fixed sin-cos embedding
self.blocks = nn.ModuleList([
Block(embed_dim, num_heads, mlp_ratio, qkv_bias=True, norm_layer=norm_layer)
for i in range(depth)])
self.norm = norm_layer(embed_dim)
self.decoder_embed = nn.Linear(embed_dim, decoder_embed_dim, bias=True)
self.mask_token = nn.Parameter(torch.zeros(1, 1, decoder_embed_dim))
self.decoder_pos_embed = nn.Parameter(torch.zeros(1, num_patches + 1, decoder_embed_dim), requires_grad=False) # fixed sin-cos embedding
self.decoder_blocks = nn.ModuleList([
Block(decoder_embed_dim, decoder_num_heads, mlp_ratio, qkv_bias=True, norm_layer=norm_layer)
for i in range(decoder_depth)
])
self.decoder_norm = norm_layer(decoder_embed_dim)
self.decoder_pred = nn.Linear(decoder_embed_dim, patch_size**2 * in_chans, bias=True) # decoder to patch
self.norm_pix_loss = norm_pix_loss
self.initialize_weights()
def initialize_weights(self):
pos_embed = get_2d_sincos_pos_embed(self.pos_embed.shape[-1], int(self.patch_embed.num_patches**.5), cls_token=True)
self.pos_embed.data.copy_(torch.from_numpy(pos_embed).float().unsqueeze(0))
decoder_pos_embed = get_2d_sincos_pos_embed(self.decoder_pos_embed.shape[-1], int(self.patch_embed.num_patches**.5), cls_token=True)
self.decoder_pos_embed.data.copy_(torch.from_numpy(decoder_pos_embed).float().unsqueeze(0))
w = self.patch_embed.proj.weight.data
torch.nn.init.xavier_uniform_(w.view([w.shape[0], -1]))
torch.nn.init.normal_(self.cls_token, std=.02)
torch.nn.init.normal_(self.mask_token, std=.02)
self.apply(self._init_weights)
def _init_weights(self, m):
if isinstance(m, nn.Linear):
torch.nn.init.xavier_uniform_(m.weight)
if isinstance(m, nn.Linear) and m.bias is not None:
nn.init.constant_(m.bias, 0)
elif isinstance(m, nn.LayerNorm):
nn.init.constant_(m.bias, 0)
nn.init.constant_(m.weight, 1.0)
def random_masking(self, x, mask_ratio):
"""
Perform per-sample random masking by per-sample shuffling.
Per-sample shuffling is done by argsort random noise.
x: [N, L, D], sequence
"""
N, L, D = x.shape # batch, length, dim
len_keep = int(L * (1 - mask_ratio))
noise = torch.rand(N, L, device=x.device) # noise in [0, 1]
ids_shuffle = torch.argsort(noise, dim=1) # ascend: small is keep, large is remove
ids_restore = torch.argsort(ids_shuffle, dim=1)
ids_keep = ids_shuffle[:, :len_keep]
x_masked = torch.gather(x, dim=1, index=ids_keep.unsqueeze(-1).repeat(1, 1, D))
mask = torch.ones([N, L], device=x.device)
mask[:, :len_keep] = 0
mask = torch.gather(mask, dim=1, index=ids_restore)
return x_masked, mask, ids_restore
def patchify(self, imgs):
"""
imgs: (N, 3, H, W)
x: (N, L, patch_size**2 *3)
"""
p = self.patch_embed.patch_size[0]
assert imgs.shape[2] == imgs.shape[3] and imgs.shape[2] % p == 0
h = w = imgs.shape[2] // p
x = imgs.reshape(shape=(imgs.shape[0], 3, h, p, w, p))
x = torch.einsum('nchpwq->nhwpqc', x)
x = x.reshape(shape=(imgs.shape[0], h*w, p**2*3))
return x
def unpatchify(self, x):
"""
x: (N, L, patch_size**2 *3)
imgs: (N, 3, H, W)
"""
p = self.patch_embed.patch_size[0]
h = w = int(x.shape[1]**0.5)
assert h *w == x.shape[1]
x = x.reshape(shape=(x.shape[0], h, w, p, p, 3))
x = torch.einsum('nhwpqc->nchpwq', x)
imgs = x.reshape(shape=(x.shape[0], 3, h * p, h * p))
return imgs
def forward_encoder(self, x, mask_ratio):
x = self.patch_embed(x)
x = x + self.pos_embed[:, 1:, :]
x, mask, ids_restore = self.random_masking(x, mask_ratio)
cls_token = self.cls_token + self.pos_embed[:, :1, :]
cls_tokens = cls_token.expand(x.shape[0], -1, -1)
x = torch.cat((cls_tokens, x), dim=1)
for blk in self.blocks:
x = blk(x)
x = self.norm(x)
return x, mask, ids_restore
def forward_decoder(self, x, ids_restore):
x = self.decoder_embed(x)
mask_tokens = self.mask_token.repeat(x.shape[0], ids_restore.shape[1] + 1 - x.shape[1], 1)
x_ = torch.cat([x[:, 1:, :], mask_tokens], dim=1) # no cls token
x_ = torch.gather(x_, dim=1, index=ids_restore.unsqueeze(-1).repeat(1, 1, x.shape[2])) # unshuffle
x = torch.cat([x[:, :1, :], x_], dim=1) # append cls token
x = x + self.decoder_pos_embed
for blk in self.decoder_blocks:
x = blk(x)
x = self.decoder_norm(x)
x = self.decoder_pred(x)
x = x[:, 1:, :]
return x
def forward_loss(self, imgs, pred, mask):
"""
imgs: [N, 3, H, W]
pred: [N, L, p*p*3]
mask: [N, L], 0 is keep, 1 is move.
"""
target = self.patchify(imgs)
if self.norm_pix_loss:
mean = target.mean(dim=-1, keepdim=True)
var = target.var(dim=-1, keepdim=True)
target = (target - mean) / (var + 1.e-6)**0.5
loss = (pred - target) ** 2
loss = loss.mean(dim=-1) # [N, L], mean loss per patch
loss = (loss * mask).sum() / mask.sum() # mean loss on removed patches
return loss
def forward(self, imgs, mask_ratio=0.75):
latent, mask, ids_restore = self.forward_encoder(imgs, mask_ratio)
pred = self.forward_decoder(latent, ids_restore) # [N, L, p*p*3]
loss = self.forward_loss(imgs, pred, mask)
return loss, pred, mask
def forward_encoder_with_given_mask(self, x, given_patch_mask):
x = self.patch_embed(x) # (N, L, D)
x = x + self.pos_embed[:, 1:, :] # (N, L, D)
N, L, D = x.shape
noise = torch.rand(N, L, device=x.device)
mask_float = given_patch_mask.float()
ids_shuffle = torch.argsort(mask_float * (noise.max() + 1) + noise, dim=1) # (N, L)
ids_restore = torch.argsort(ids_shuffle, dim=1)
len_keep = L - given_patch_mask.sum(dim=1).max().int().item()
ids_keep = ids_shuffle[:, :len_keep]
x_masked = torch.gather(x, dim=1, index=ids_keep.unsqueeze(-1).repeat(1, 1, D))
cls_token = self.cls_token + self.pos_embed[:, :1, :]
cls_tokens = cls_token.expand(x.shape[0], -1, -1)
x = torch.cat((cls_tokens, x_masked), dim=1)
for blk in self.blocks:
x = blk(x)
x = self.norm(x)
return x, given_patch_mask, ids_restore
def forward_with_given_mask(self, imgs, given_patch_mask):
latent, mask, ids_restore = self.forward_encoder_with_given_mask(imgs, given_patch_mask)
pred = self.forward_decoder(latent, ids_restore)
loss = self.forward_loss(imgs, pred, mask)
return loss, pred, mask
def mae_vit_base_patch16(**kwargs):
model = MaskedAutoEncoderViT(
patch_size=16, embed_dim=768, depth=12, num_heads=12,
decoder_embed_dim=512, decoder_depth=8, decoder_num_heads=16,
mlp_ratio=4, norm_layer=partial(nn.LayerNorm, eps=1e-6), **kwargs)
return model
def mae_vit_large_patch16(**kwargs):
model = MaskedAutoEncoderViT(
patch_size=16, embed_dim=1024, depth=24, num_heads=16,
decoder_embed_dim=512, decoder_depth=8, decoder_num_heads=16,
mlp_ratio=4, norm_layer=partial(nn.LayerNorm, eps=1e-6), **kwargs)
return model
def mae_vit_huge_patch14(**kwargs):
model = MaskedAutoEncoderViT(
patch_size=14, embed_dim=1280, depth=32, num_heads=16,
decoder_embed_dim=512, decoder_depth=8, decoder_num_heads=16,
mlp_ratio=4, norm_layer=partial(nn.LayerNorm, eps=1e-6), **kwargs)
return model