Upload 3 files
Browse files- dic.py +112 -0
- requirements.txt +5 -0
- tb_classification_model.h5 +3 -0
dic.py
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import streamlit as st
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import numpy as np
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import cv2
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import tensorflow as tf
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from tensorflow.keras.preprocessing import image
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import matplotlib.pyplot as plt
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from PIL import Image
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import gdown
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# Load trained model
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# model_path = "tb_classification_model.h5" # Ensure this file exists
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# model = tf.keras.models.load_model(model_path)
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file_id = "1S6Keu4Qmaj6NrtX3lF3s9tbUFlyYhDhL"
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output_path = "tb_classification_model.h5"
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# Download the model
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gdown.download(f"https://drive.google.com/uc?id={file_id}", output_path, quiet=False)
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# Load the model
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model = tf.keras.models.load_model(output_path)
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def preprocess_image(img):
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img = img.resize((224, 224)) # Resize to model input size
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img_array = image.img_to_array(img)
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# Convert grayscale images to 3-channel RGB
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if img_array.shape[-1] == 1:
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img_array = np.repeat(img_array, 3, axis=-1) # (224, 224, 1) → (224, 224, 3)
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img_array = img_array / 255.0 # Normalize
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img_array = np.expand_dims(img_array, axis=0) # Add batch dimension
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return img_array # ✅ Return processed image
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# Function to compute Grad-CAM
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def compute_gradcam(model, img_array, layer_name="conv4_block5_out"):
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grad_model = tf.keras.models.Model(inputs=model.input,
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outputs=[model.get_layer(layer_name).output, model.output])
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with tf.GradientTape() as tape:
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conv_outputs, predictions = grad_model(img_array)
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class_idx = tf.argmax(predictions[0])
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loss = predictions[:, class_idx]
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grads = tape.gradient(loss, conv_outputs)
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pooled_grads = tf.reduce_mean(grads, axis=(0, 1, 2))
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conv_outputs = conv_outputs.numpy()[0]
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heatmap = np.dot(conv_outputs, pooled_grads.numpy())
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heatmap = np.maximum(heatmap, 0) # ReLU
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heatmap /= np.max(heatmap) + 1e-10 # Normalize
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return heatmap
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# Function to overlay Grad-CAM heatmap
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def overlay_gradcam(img, heatmap, alpha=0.4):
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"""Overlay Grad-CAM heatmap on the original image."""
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# Ensure heatmap is the same size as the image
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heatmap = cv2.resize(heatmap, (img.width, img.height)) # Resize to match original image
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# Normalize heatmap to [0,255] and apply color mapping
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heatmap = np.uint8(255 * heatmap)
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heatmap = cv2.applyColorMap(heatmap, cv2.COLORMAP_JET)
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# Convert PIL image to NumPy array
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original = np.array(img)
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# If original image is grayscale, convert to RGB
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if len(original.shape) == 2 or original.shape[-1] == 1:
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original = cv2.cvtColor(original, cv2.COLOR_GRAY2RGB)
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# Ensure both images have the same shape (H, W, 3)
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if heatmap.shape != original.shape:
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heatmap = cv2.resize(heatmap, (original.shape[1], original.shape[0]))
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# Blend original image with heatmap
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superimposed = cv2.addWeighted(original, 1 - alpha, heatmap, alpha, 0)
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return superimposed
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# Streamlit UI
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st.title("Tuberculosis Detection using ResNet50")
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st.write("Upload a Chest X-ray image to classify as **Normal** or **TB**.")
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uploaded_file = st.file_uploader("Choose a Chest X-ray Image...", type=["jpg", "png", "jpeg"])
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if uploaded_file is not None:
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image_pil = Image.open(uploaded_file)
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st.image(image_pil, caption="Uploaded Image", use_container_width=True)
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# Preprocess image
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img_array = preprocess_image(image_pil)
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# Get model prediction
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prediction = model.predict(img_array)[0][0]
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result = "Tuberculosis Detected" if prediction > 0.5 else "Normal"
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confidence = prediction if prediction > 0.5 else 1 - prediction
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st.subheader(f"Prediction: **{result}**")
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st.write(f"Confidence: **{confidence:.2%}**")
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# Generate Grad-CAM
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heatmap = compute_gradcam(model, img_array)
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gradcam_output = overlay_gradcam(image_pil, heatmap)
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# Show Grad-CAM
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st.subheader("Grad-CAM Visualization")
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st.image(gradcam_output, caption="Grad-CAM Heatmap", use_container_width=True)
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requirements.txt
ADDED
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@@ -0,0 +1,5 @@
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opencv-python-headless
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streamlit
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numpy
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Pillow
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tensorflow
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tb_classification_model.h5
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:3e31385eb92710b2e75ce67989885b32fbcadf88b4667dcabdcd613c5e927be3
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size 828735528
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