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majoroslab
/
BlueSTARR
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Majoros Lab
3
English
TF-Keras
biology
genomics
STARR-seq
non-coding
variant effect prediction
License:
mit
Model card
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xet
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4
refs/pr/3
BlueSTARR
/
K562
567 MB
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1 contributor
History:
10 commits
hlapp
Best model using 1kbp seqs with K562 data
f4d6fa4
verified
7 months ago
1Kbp
Best model using 1kbp seqs with K562 data
7 months ago
Biased_downsampling
Best model for K562 data from biased downsampling, and using MSE loss
7 months ago
CustomLoss
Best model for K562 data, using custom loss
7 months ago
DeepSTARR-BlueSTARR
Best model using DeepSTARR layout with K562 data
7 months ago
MSELoss
Best model for K562 data and MSE loss
7 months ago
TE
Best model using transformer-encoder layers with K562 data
7 months ago
Unbiased_downsampling
Best model for K562 data downsampled to 1M
7 months ago
