| import sys |
| from pathlib import Path |
|
|
|
|
| sys.path.insert(0, str(Path(__file__).resolve().parents[1] / "scripts")) |
|
|
| from review_patent_substantivity_tuples import mock_review, normalize_decision, tuple_row |
|
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|
|
| def test_normalize_decision_accepts_only_supported_single_molecule_tuple(): |
| row = { |
| "patent_id": "US123A1", |
| "source_locus": "description:10", |
| "compound_ref_verbatim": "compound 7", |
| "resolved_cas": "100-52-7", |
| "resolved_smiles": None, |
| "measured_value_verbatim": "24 hours", |
| "units": "hours", |
| "construct": { |
| "property_name": "substantivity", |
| "substrate": ["skin"], |
| "time_points": ["24 hours"], |
| }, |
| "verbatim_quote": "Compound 7 (100-52-7) had substantivity on skin for 24 hours.", |
| "provenance": {"url": "https://patents.google.com/patent/US123A1/en"}, |
| } |
| poucher = {"100-52-7": {"poucher_coefficient": 1, "tier_band": "top", "all_poucher_names": ["Benzaldehyde"]}} |
|
|
| normalized = normalize_decision(row, mock_review(row), poucher, 0.75, "mock", "mock", 1) |
|
|
| assert normalized["accepted_for_exploratory_tuple_set"] is True |
| assert normalized["poucher_overlap"]["by_cas"] is True |
| assert tuple_row(normalized)["measured_value"] == "24 hours" |
|
|
|
|
| def test_normalize_decision_rejects_missing_construct_overlap(): |
| row = { |
| "patent_id": "US123A1", |
| "source_locus": "description:11", |
| "verbatim_quote": "Compound 7 is included at 10 to 30 wt% in a fragrance composition.", |
| "provenance": {}, |
| } |
| decision = { |
| "action": "accept", |
| "single_molecule": True, |
| "molecule_name": "compound 7", |
| "cas": None, |
| "smiles": None, |
| "measured_property": "other", |
| "measured_value": "10 to 30 wt%", |
| "units": "wt%", |
| "substrate": None, |
| "timepoint": None, |
| "method_summary": "Composition loading.", |
| "construct_overlap_with_poucher": False, |
| "construct_overlap_reason": "Composition percentage is not olfactive duration.", |
| "evidence_quote": "10 to 30 wt%", |
| "confidence": 0.95, |
| } |
|
|
| normalized = normalize_decision(row, decision, {}, 0.75, "mock", "mock", 1) |
|
|
| assert normalized["accepted_for_exploratory_tuple_set"] is False |
| assert "no_poucher_construct_overlap" in normalized["validation_errors"] |
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|
