scFM-dataselection / requirements.txt
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# Tested CPU loading stack; Python 3.10.
setuptools==75.6.0
anndata==0.10.8
numpy==1.26.0
pandas==1.5.3
scipy==1.14.1
torch==2.0.1
lightning==2.1.4
torchmetrics==1.4.0
transformers==4.48.0
safetensors==0.4.2
scvi-tools==1.1.2
jax==0.4.31
jaxlib==0.4.31
flax==0.8.5
optax==0.2.3
chex==0.1.87
numpyro==0.15.0
orbax-checkpoint==0.6.0
huggingface-hub==0.36.2