cff-version: 1.2.0
message: "Please cite the published Nature Methods paper when using this collection."
title: "scFM-dataselection recovered checkpoint collection"
type: dataset
version: "pretraining-release"
url: "https://huggingface.co/microsoft/scFM-dataselection"
license: MIT
authors:
  - family-names: "DenAdel"
    given-names: "Alan"
  - family-names: "Hughes"
    given-names: "Madeline"
  - family-names: "Thoutam"
    given-names: "Akshaya"
  - family-names: "Gupta"
    given-names: "Anay"
  - family-names: "Navia"
    given-names: "Andrew W."
  - family-names: "Fusi"
    given-names: "Nicolo"
  - family-names: "Raghavan"
    given-names: "Srivatsan"
  - family-names: "Winter"
    given-names: "Peter S."
  - family-names: "Amini"
    given-names: "Ava P."
  - family-names: "Crawford"
    given-names: "Lorin"
preferred-citation:
  type: article
  authors:
    - family-names: "DenAdel"
      given-names: "Alan"
    - family-names: "Hughes"
      given-names: "Madeline"
    - family-names: "Thoutam"
      given-names: "Akshaya"
    - family-names: "Gupta"
      given-names: "Anay"
    - family-names: "Navia"
      given-names: "Andrew W."
    - family-names: "Fusi"
      given-names: "Nicolo"
    - family-names: "Raghavan"
      given-names: "Srivatsan"
    - family-names: "Winter"
      given-names: "Peter S."
    - family-names: "Amini"
      given-names: "Ava P."
    - family-names: "Crawford"
      given-names: "Lorin"
  title: "Evaluating the role of pretraining dataset size and diversity on single-cell foundation model performance"
  journal: "Nature Methods"
  year: 2026
  volume: "23"
  issue: "7"
  start: "1447"
  end: "1457"
  doi: "10.1038/s41592-026-03120-y"