Upload inference_min.py with huggingface_hub
Browse files- inference_min.py +221 -0
inference_min.py
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| 1 |
+
# -*- coding: utf-8 -*-
|
| 2 |
+
from __future__ import annotations
|
| 3 |
+
import os, json, re
|
| 4 |
+
from pathlib import Path
|
| 5 |
+
from typing import List, Optional
|
| 6 |
+
|
| 7 |
+
import torch
|
| 8 |
+
import torch.nn as nn
|
| 9 |
+
import torch.nn.functional as F
|
| 10 |
+
from PIL import Image
|
| 11 |
+
|
| 12 |
+
try:
|
| 13 |
+
import open_clip
|
| 14 |
+
HAS_OPENCLIP = True
|
| 15 |
+
except Exception:
|
| 16 |
+
HAS_OPENCLIP = False
|
| 17 |
+
|
| 18 |
+
from transformers import (
|
| 19 |
+
AutoModelForCausalLM, AutoTokenizer,
|
| 20 |
+
CLIPImageProcessor as HFCLIPImageProcessor,
|
| 21 |
+
CLIPModel as HFCLIPModel,
|
| 22 |
+
)
|
| 23 |
+
|
| 24 |
+
class PrefixProjector(nn.Module):
|
| 25 |
+
def __init__(self, in_dim: int, out_dim: int, tokens: int, p_drop: float = 0.05):
|
| 26 |
+
super().__init__()
|
| 27 |
+
hidden = max(512, out_dim * 2)
|
| 28 |
+
self.fc1 = nn.Linear(in_dim, hidden)
|
| 29 |
+
self.fc2 = nn.Linear(hidden, out_dim * tokens)
|
| 30 |
+
self.ln = nn.LayerNorm(out_dim)
|
| 31 |
+
self.tokens = tokens
|
| 32 |
+
self.drop = nn.Dropout(p_drop)
|
| 33 |
+
self.alpha = nn.Parameter(torch.tensor(0.5))
|
| 34 |
+
nn.init.xavier_uniform_(self.fc1.weight, gain=1.0)
|
| 35 |
+
nn.init.zeros_(self.fc1.bias)
|
| 36 |
+
nn.init.xavier_uniform_(self.fc2.weight, gain=0.5)
|
| 37 |
+
nn.init.zeros_(self.fc2.bias)
|
| 38 |
+
def forward(self, x: torch.Tensor) -> torch.Tensor:
|
| 39 |
+
y = F.gelu(self.fc1(x))
|
| 40 |
+
y = self.fc2(y).view(x.size(0), self.tokens, -1)
|
| 41 |
+
y = self.ln(y)
|
| 42 |
+
y = self.drop(self.alpha * y)
|
| 43 |
+
return y
|
| 44 |
+
|
| 45 |
+
class CLIPBackend:
|
| 46 |
+
def __init__(self, repo_or_kind: str, device: str):
|
| 47 |
+
self.device = device
|
| 48 |
+
self.repo_or_kind = repo_or_kind
|
| 49 |
+
|
| 50 |
+
# Определяем тип модели
|
| 51 |
+
if 'BiomedCLIP' in repo_or_kind or 'microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224' in repo_or_kind:
|
| 52 |
+
# BiomedCLIP через open_clip
|
| 53 |
+
assert HAS_OPENCLIP, "open_clip is required for BiomedCLIP"
|
| 54 |
+
if not repo_or_kind.startswith('microsoft/'):
|
| 55 |
+
repo_or_kind = 'microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224'
|
| 56 |
+
model_name = f'hf-hub:{repo_or_kind}'
|
| 57 |
+
self.model, self.preprocess, _ = open_clip.create_model_and_transforms(model_name)
|
| 58 |
+
self.model = self.model.to(device).eval()
|
| 59 |
+
self.kind = "open_clip"
|
| 60 |
+
self.processor = None
|
| 61 |
+
elif "/" in repo_or_kind and 'pubmed-clip' in repo_or_kind:
|
| 62 |
+
# PubMedCLIP через HF
|
| 63 |
+
self.model = HFCLIPModel.from_pretrained(repo_or_kind).to(device).eval()
|
| 64 |
+
self.processor = HFCLIPImageProcessor.from_pretrained(repo_or_kind)
|
| 65 |
+
self.kind = "hf_clip"
|
| 66 |
+
self.preprocess = None
|
| 67 |
+
elif "/" in repo_or_kind or repo_or_kind.startswith('redlessone/'):
|
| 68 |
+
# DermLIP через open_clip
|
| 69 |
+
assert HAS_OPENCLIP, "open_clip is required for DermLIP"
|
| 70 |
+
model_name = f"hf-hub:{repo_or_kind}"
|
| 71 |
+
self.model, self.preprocess, _ = open_clip.create_model_and_transforms(model_name)
|
| 72 |
+
self.model = self.model.to(device).eval()
|
| 73 |
+
self.kind = "open_clip"
|
| 74 |
+
self.processor = None
|
| 75 |
+
else:
|
| 76 |
+
# Fallback для других моделей, включая случаи когда передается просто тип модели
|
| 77 |
+
try:
|
| 78 |
+
# Пытаемся определить по названию
|
| 79 |
+
if 'biomedclip' in repo_or_kind.lower() or 'biomed' in repo_or_kind.lower():
|
| 80 |
+
assert HAS_OPENCLIP, "open_clip is required for BiomedCLIP"
|
| 81 |
+
model_name = "hf-hub:microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224"
|
| 82 |
+
self.model, self.preprocess, _ = open_clip.create_model_and_transforms(model_name)
|
| 83 |
+
self.model = self.model.to(device).eval()
|
| 84 |
+
self.kind = "open_clip"
|
| 85 |
+
self.processor = None
|
| 86 |
+
elif 'dermlip' in repo_or_kind.lower():
|
| 87 |
+
assert HAS_OPENCLIP, "open_clip is required for DermLIP"
|
| 88 |
+
model_name = "hf-hub:redlessone/DermLIP_ViT-B-16"
|
| 89 |
+
self.model, self.preprocess, _ = open_clip.create_model_and_transforms(model_name)
|
| 90 |
+
self.model = self.model.to(device).eval()
|
| 91 |
+
self.kind = "open_clip"
|
| 92 |
+
self.processor = None
|
| 93 |
+
elif 'pubmed' in repo_or_kind.lower():
|
| 94 |
+
# PubMedCLIP через HF
|
| 95 |
+
repo_name = "flaviagiammarino/pubmed-clip-vit-base-patch32"
|
| 96 |
+
self.model = HFCLIPModel.from_pretrained(repo_name).to(device).eval()
|
| 97 |
+
self.processor = HFCLIPImageProcessor.from_pretrained(repo_name)
|
| 98 |
+
self.kind = "hf_clip"
|
| 99 |
+
self.preprocess = None
|
| 100 |
+
else:
|
| 101 |
+
raise ValueError(f"Unknown model type: {repo_or_kind}")
|
| 102 |
+
except Exception as e:
|
| 103 |
+
# Последняя попытка - попробовать как HF модель
|
| 104 |
+
try:
|
| 105 |
+
self.model = HFCLIPModel.from_pretrained(repo_or_kind).to(device).eval()
|
| 106 |
+
self.processor = HFCLIPImageProcessor.from_pretrained(repo_or_kind)
|
| 107 |
+
self.kind = "hf_clip"
|
| 108 |
+
self.preprocess = None
|
| 109 |
+
except:
|
| 110 |
+
raise ValueError(f"Failed to load model {repo_or_kind}: {e}")
|
| 111 |
+
|
| 112 |
+
# Определяем размер эмбеддинга
|
| 113 |
+
if self.kind == "open_clip":
|
| 114 |
+
with torch.no_grad():
|
| 115 |
+
img = Image.new('RGB', (224, 224), color=0)
|
| 116 |
+
x = self.preprocess(img).unsqueeze(0).to(device)
|
| 117 |
+
feat = self.model.encode_image(x)
|
| 118 |
+
self.embed_dim = int(feat.shape[-1])
|
| 119 |
+
else:
|
| 120 |
+
self.embed_dim = int(self.model.config.projection_dim)
|
| 121 |
+
|
| 122 |
+
@torch.inference_mode()
|
| 123 |
+
def encode_images(self, paths: List[str]) -> torch.Tensor:
|
| 124 |
+
ims = []
|
| 125 |
+
if self.kind == "open_clip":
|
| 126 |
+
for p in paths:
|
| 127 |
+
try:
|
| 128 |
+
im = Image.open(p).convert("RGB")
|
| 129 |
+
except:
|
| 130 |
+
im = Image.new("RGB", (224, 224), color=0)
|
| 131 |
+
ims.append(self.preprocess(im))
|
| 132 |
+
x = torch.stack(ims).to(self.device)
|
| 133 |
+
f = self.model.encode_image(x)
|
| 134 |
+
else:
|
| 135 |
+
# HF CLIP (PubMedCLIP)
|
| 136 |
+
for p in paths:
|
| 137 |
+
try:
|
| 138 |
+
im = Image.open(p).convert("RGB")
|
| 139 |
+
except:
|
| 140 |
+
im = Image.new("RGB", (224, 224), color=0)
|
| 141 |
+
ims.append(im)
|
| 142 |
+
proc = self.processor(images=ims, return_tensors='pt')
|
| 143 |
+
x = proc['pixel_values'].to(self.device)
|
| 144 |
+
f = self.model.get_image_features(pixel_values=x)
|
| 145 |
+
return F.normalize(f, dim=-1)
|
| 146 |
+
|
| 147 |
+
class Captioner(nn.Module):
|
| 148 |
+
def __init__(self, gpt2_name: str, clip_repo: str, prefix_tokens: int, prompt: str, device: str):
|
| 149 |
+
super().__init__()
|
| 150 |
+
self.device = device
|
| 151 |
+
self.prompt = prompt
|
| 152 |
+
self.tok = AutoTokenizer.from_pretrained(gpt2_name)
|
| 153 |
+
if self.tok.pad_token is None:
|
| 154 |
+
self.tok.pad_token = self.tok.eos_token
|
| 155 |
+
self.gpt2 = AutoModelForCausalLM.from_pretrained(gpt2_name).to(device).eval()
|
| 156 |
+
self.clip = CLIPBackend(clip_repo, device)
|
| 157 |
+
self.prefix = PrefixProjector(self.clip.embed_dim, int(self.gpt2.config.n_embd), prefix_tokens).to(device).eval()
|
| 158 |
+
|
| 159 |
+
@torch.inference_mode()
|
| 160 |
+
def generate(self, img_paths: List[str], prompt: Optional[str] = None) -> List[str]:
|
| 161 |
+
pr = prompt or self.prompt or ""
|
| 162 |
+
f = self.clip.encode_images(img_paths)
|
| 163 |
+
pref = self.prefix(f)
|
| 164 |
+
ids = self.tok([pr]*pref.size(0), return_tensors='pt', padding=True, truncation=True).to(self.device)
|
| 165 |
+
emb_prompt = self.gpt2.transformer.wte(ids['input_ids'])
|
| 166 |
+
inputs_embeds = torch.cat([pref, emb_prompt], dim=1)
|
| 167 |
+
attn = torch.ones(inputs_embeds.size()[:-1], dtype=torch.long, device=self.device)
|
| 168 |
+
gen = self.gpt2.generate(
|
| 169 |
+
inputs_embeds=inputs_embeds, attention_mask=attn,
|
| 170 |
+
max_new_tokens=60, min_new_tokens=24, num_beams=4,
|
| 171 |
+
no_repeat_ngram_size=4, repetition_penalty=1.15, length_penalty=0.6,
|
| 172 |
+
pad_token_id=self.tok.eos_token_id, eos_token_id=self.tok.eos_token_id, early_stopping=True
|
| 173 |
+
)
|
| 174 |
+
outs = self.tok.batch_decode(gen, skip_special_tokens=True)
|
| 175 |
+
res = []
|
| 176 |
+
for s in outs:
|
| 177 |
+
cut = s.find(pr)
|
| 178 |
+
if cut >= 0: s = s[cut+len(pr):]
|
| 179 |
+
res.append(s.strip())
|
| 180 |
+
return res
|
| 181 |
+
|
| 182 |
+
def load_model(repo_dir: str | os.PathLike) -> Captioner:
|
| 183 |
+
repo_dir = Path(repo_dir)
|
| 184 |
+
cfgs = sorted(repo_dir.glob("final_captioner_*.json"))
|
| 185 |
+
if not cfgs:
|
| 186 |
+
raise FileNotFoundError("final_captioner_*.json not found in repo snapshot")
|
| 187 |
+
data = json.loads(cfgs[-1].read_text(encoding='utf-8'))
|
| 188 |
+
gpt2 = data.get("gpt2_name", "gpt2-medium")
|
| 189 |
+
|
| 190 |
+
# Определяем CLIP репозиторий с поддержкой TimmModel
|
| 191 |
+
clip_repo = data.get("clip_weight_path", data.get("clip_repo", data.get("clip_backend_kind", "")))
|
| 192 |
+
|
| 193 |
+
# Если информация о CLIP не найдена в JSON, пытаемся определить по имени файла
|
| 194 |
+
if not clip_repo or clip_repo in ["open_clip", "hf_clip"]:
|
| 195 |
+
ckpts = sorted(repo_dir.glob("final_captioner_*.pt"))
|
| 196 |
+
if ckpts:
|
| 197 |
+
ckpt_name = str(ckpts[-1])
|
| 198 |
+
if "TimmModel" in ckpt_name:
|
| 199 |
+
clip_repo = "microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224"
|
| 200 |
+
elif "VisionTransformer" in ckpt_name:
|
| 201 |
+
clip_repo = "redlessone/DermLIP_ViT-B-16"
|
| 202 |
+
elif "CLIPModel" in ckpt_name:
|
| 203 |
+
clip_repo = "flaviagiammarino/pubmed-clip-vit-base-patch32"
|
| 204 |
+
elif "biomedclip" in ckpt_name.lower():
|
| 205 |
+
clip_repo = "microsoft/BiomedCLIP-PubMedBERT_256-vit_base_patch16_224"
|
| 206 |
+
|
| 207 |
+
prefix_tokens = int(data.get("prefix_tokens", 32))
|
| 208 |
+
prompt = data.get("prompt", "Describe the skin lesion.")
|
| 209 |
+
device = "cuda" if torch.cuda.is_available() else "cpu"
|
| 210 |
+
model = Captioner(gpt2, clip_repo, prefix_tokens, prompt, device).to(device).eval()
|
| 211 |
+
# подгрузим state_dict
|
| 212 |
+
ckpts = sorted(repo_dir.glob("final_captioner_*.pt"))
|
| 213 |
+
if not ckpts:
|
| 214 |
+
raise FileNotFoundError("final_captioner_*.pt not found in repo snapshot")
|
| 215 |
+
state = torch.load(ckpts[-1], map_location="cpu")
|
| 216 |
+
sd = state.get("model", state)
|
| 217 |
+
model.load_state_dict(sd, strict=False)
|
| 218 |
+
return model
|
| 219 |
+
|
| 220 |
+
def generate(model: Captioner, img_paths: List[str], prompt: Optional[str] = None) -> List[str]:
|
| 221 |
+
return model.generate(img_paths, prompt=prompt)
|