| name: bpe_v2 |
| channels: |
| - defaults |
| - conda-forge |
| - bioconda |
| dependencies: |
| - _libgcc_mutex=0.1 |
| - _openmp_mutex=5.1 |
| - annotated-types=0.7.0 |
| - aom=3.12.1 |
| - appdirs=1.4.4 |
| - asttokens=3.0.0 |
| - bcftools=1.3.1 |
| - biopython=1.85 |
| - blas=1.0 |
| - bottleneck=1.4.2 |
| - brotlicffi=1.0.9.2 |
| - bzip2=1.0.8 |
| - c-ares=1.34.5 |
| - ca-certificates=2025.12.2 |
| - cairo=1.18.4 |
| - certifi=2025.10.5 |
| - cffi=2.0.0 |
| - charset-normalizer=3.4.4 |
| - click=8.1.8 |
| - comm=0.2.3 |
| - contourpy=1.2.1 |
| - curl=7.88.1 |
| - cycler=0.11.0 |
| - cyrus-sasl=2.1.28 |
| - dav1d=1.2.1 |
| - dbus=1.16.2 |
| - debugpy=1.8.16 |
| - decorator=5.2.1 |
| - docker-pycreds=0.4.0 |
| - eval_type_backport=0.2.2 |
| - executing=2.2.0 |
| - expat=2.7.3 |
| - filelock=3.17.0 |
| - fontconfig=2.15.0 |
| - fonttools=4.60.1 |
| - freetype=2.13.3 |
| - fribidi=1.0.10 |
| - fsspec=2025.7.0 |
| - gettext=0.21.0 |
| - gitdb=4.0.12 |
| - gitpython=3.1.45 |
| - glib=2.84.4 |
| - glib-tools=2.84.4 |
| - graphite2=1.3.14 |
| - gst-plugins-base=1.14.1 |
| - gstreamer=1.14.1 |
| - harfbuzz=10.2.0 |
| - hf-xet=1.1.8 |
| - htslib=1.3.1 |
| - huggingface_hub=0.34.4 |
| - icu=73.1 |
| - idna=3.11 |
| - importlib-metadata=8.7.0 |
| - importlib_resources=6.5.2 |
| - intel-openmp=2023.0.0 |
| - ipykernel=6.30.1 |
| - ipython=8.18.1 |
| - jansson=2.14 |
| - jedi=0.19.2 |
| - jpeg=9f |
| - jupyter_client=8.6.3 |
| - jupyter_core=5.8.1 |
| - keyutils=1.6.3 |
| - kiwisolver=1.4.4 |
| - krb5=1.20.1 |
| - lcms2=2.17 |
| - ld_impl_linux-64=2.44 |
| - lerc=4.0.0 |
| - libabseil=20250512.1 |
| - libavif=1.3.0 |
| - libblas=3.9.0 |
| - libcblas=3.9.0 |
| - libclang=14.0.6 |
| - libclang13=14.0.6 |
| - libcups=2.4.2 |
| - libcurl=7.88.1 |
| - libdeflate=1.22 |
| - libdrm=2.4.124 |
| - libedit=3.1.20250104 |
| - libegl=1.7.0 |
| - libev=4.33 |
| - libevent=2.1.12 |
| - libexpat=2.7.3 |
| - libffi=3.4.4 |
| - libgcc=15.2.0 |
| - libgcc-ng=15.2.0 |
| - libgfortran=15.2.0 |
| - libgfortran-ng=15.2.0 |
| - libgfortran5=15.2.0 |
| - libgl=1.7.0 |
| - libglib=2.84.4 |
| - libglvnd=1.7.0 |
| - libglx=1.7.0 |
| - libgomp=15.2.0 |
| - libiconv=1.16 |
| - libidn2=2.3.8 |
| - liblapack=3.9.0 |
| - libllvm14=14.0.6 |
| - libllvm15=15.0.7 |
| - libnghttp2=1.52.0 |
| - libnsl=2.0.0 |
| - libopengl=1.7.0 |
| - libopenjpeg=2.5.4 |
| - libpciaccess=0.18 |
| - libpng=1.6.50 |
| - libpq=12.15 |
| - libprotobuf=3.20.3 |
| - libsodium=1.0.20 |
| - libssh2=1.10.0 |
| - libstdcxx=15.2.0 |
| - libstdcxx-ng=15.2.0 |
| - libtiff=4.7.1 |
| - libunistring=1.3 |
| - libuuid=1.41.5 |
| - libwebp-base=1.6.0 |
| - libxcb=1.17.0 |
| - libxkbcommon=1.9.1 |
| - libxml2=2.13.9 |
| - llvmlite=0.43.0 |
| - lmdb=0.9.31 |
| - lz4-c=1.9.4 |
| - matplotlib=3.9.2 |
| - matplotlib-base=3.9.2 |
| - matplotlib-inline=0.1.7 |
| - mesalib=25.1.5 |
| - mkl=2023.1.0 |
| - mkl-service=2.4.0 |
| - mkl_fft=1.3.11 |
| - mkl_random=1.2.8 |
| - mysql=5.7.24 |
| - mysql-connector-c=6.1.6 |
| - ncurses=6.5 |
| - nest-asyncio=1.6.0 |
| - numba=0.60.0 |
| - numexpr=2.10.1 |
| - openjpeg=2.5.4 |
| - openldap=2.5.5 |
| - openssl=1.1.1w |
| - packaging=25.0 |
| - pandas=2.3.3 |
| - parso=0.8.4 |
| - pcre2=10.46 |
| - pexpect=4.9.0 |
| - pickleshare=0.7.5 |
| - pillow=11.3.0 |
| - pip=25.3 |
| - pixman=0.46.4 |
| - platformdirs=4.3.8 |
| - ply=3.11 |
| - prompt-toolkit=3.0.51 |
| - protobuf=3.20.3 |
| - psutil=7.0.0 |
| - pthread-stubs=0.3 |
| - ptyprocess=0.7.0 |
| - pure_eval=0.2.3 |
| - pybind11-abi=4 |
| - pycparser=2.23 |
| - pydantic=2.11.7 |
| - pydantic-core=2.33.2 |
| - pygments=2.19.2 |
| - pynndescent=0.5.13 |
| - pyparsing=3.2.0 |
| - pyqt=5.15.10 |
| - pyqt5-sip=12.13.0 |
| - pyqt6-sip=13.10.2 |
| - pysam=0.9.1 |
| - pysocks=1.7.1 |
| - python=3.9.18 |
| - python-dateutil=2.9.0post0 |
| - python-tzdata=2025.2 |
| - python_abi=3.9 |
| - pytz=2025.2 |
| - pyyaml=6.0.2 |
| - pyzmq=27.0.2 |
| - qt-main=5.15.2 |
| - readline=8.3 |
| - requests=2.32.5 |
| - samtools=1.3.1 |
| - scikit-learn=1.6.1 |
| - scipy=1.13.1 |
| - sentry-sdk=2.35.0 |
| - setproctitle=1.3.6 |
| - setuptools=80.9.0 |
| - sip=6.7.12 |
| - six=1.17.0 |
| - smmap=5.0.2 |
| - spirv-tools=2025.1 |
| - sqlite=3.51.0 |
| - stack_data=0.6.3 |
| - tbb=2021.8.0 |
| - threadpoolctl=3.6.0 |
| - tk=8.6.15 |
| - tomli=2.2.1 |
| - tornado=6.5.2 |
| - tqdm=4.67.1 |
| - traitlets=5.14.3 |
| - typing=3.10.0.0 |
| - typing-extensions=4.15.0 |
| - typing-inspection=0.4.1 |
| - typing_extensions=4.15.0 |
| - tzdata=2025b |
| - ucsc-bigwigtobedgraph=357 |
| - umap-learn=0.5.9.post2 |
| - urllib3=2.5.0 |
| - wayland=1.24.0 |
| - wcwidth=0.2.13 |
| - wheel=0.45.1 |
| - xcb-util=0.4.1 |
| - xcb-util-cursor=0.1.5 |
| - xcb-util-image=0.4.0 |
| - xcb-util-keysyms=0.4.1 |
| - xcb-util-renderutil=0.3.10 |
| - xcb-util-wm=0.4.2 |
| - xkeyboard-config=2.44 |
| - xorg-libice=1.1.2 |
| - xorg-libsm=1.2.6 |
| - xorg-libx11=1.8.12 |
| - xorg-libxau=1.0.12 |
| - xorg-libxdmcp=1.1.5 |
| - xorg-libxext=1.3.6 |
| - xorg-libxfixes=6.0.1 |
| - xorg-libxrandr=1.5.4 |
| - xorg-libxrender=0.9.12 |
| - xorg-libxshmfence=1.3.3 |
| - xorg-libxxf86vm=1.1.6 |
| - xorg-xorgproto=2024.1 |
| - xz=5.6.4 |
| - yaml=0.2.5 |
| - zeromq=4.3.5 |
| - zipp=3.23.0 |
| - zlib=1.2.13 |
| - zstd=1.5.6 |
| - pip: |
| - accelerate==0.25.0 |
| - aiohappyeyeballs==2.6.1 |
| - aiohttp==3.13.2 |
| - aiosignal==1.4.0 |
| - anyio==4.12.0 |
| - async-timeout==5.0.1 |
| - attrs==25.4.0 |
| - datasets==4.4.1 |
| - dill==0.4.0 |
| - evaluate==0.4.6 |
| - exceptiongroup==1.3.1 |
| - frozenlist==1.8.0 |
| - h11==0.16.0 |
| - httpcore==1.0.9 |
| - httpx==0.28.1 |
| - jinja2==3.1.6 |
| - joblib==1.5.3 |
| - markupsafe==3.0.3 |
| - mpmath==1.3.0 |
| - multidict==6.7.0 |
| - multiprocess==0.70.18 |
| - networkx==3.2.1 |
| - numpy==2.0.2 |
| - nvidia-cublas-cu12==12.8.4.1 |
| - nvidia-cuda-cupti-cu12==12.8.90 |
| - nvidia-cuda-nvrtc-cu12==12.8.93 |
| - nvidia-cuda-runtime-cu12==12.8.90 |
| - nvidia-cudnn-cu12==9.10.2.21 |
| - nvidia-cufft-cu12==11.3.3.83 |
| - nvidia-cufile-cu12==1.13.1.3 |
| - nvidia-curand-cu12==10.3.9.90 |
| - nvidia-cusolver-cu12==11.7.3.90 |
| - nvidia-cusparse-cu12==12.5.8.93 |
| - nvidia-cusparselt-cu12==0.7.1 |
| - nvidia-nccl-cu12==2.27.3 |
| - nvidia-nvjitlink-cu12==12.8.93 |
| - nvidia-nvtx-cu12==12.8.90 |
| - propcache==0.4.1 |
| - pyarrow==21.0.0 |
| - regex==2025.11.3 |
| - safetensors==0.7.0 |
| - sympy==1.14.0 |
| - tokenizers==0.15.2 |
| - torch==2.8.0 |
| - transformers==4.35.2 |
| - triton==3.4.0 |
| - wandb==0.23.1 |
| - xxhash==3.6.0 |
| - yarl==1.22.0 |
|
|
