Delete tables

tables/results_all_tasks.csv

@@ -1,37 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-demo_coding_vs_intergenomic_seqs,base_3072,0.23370100557804108,0.9143,0.9142994643716523,0.8286761912329407,0.9143515624765606,0.9143246291940671,0.6978,14330.746,113.213,3.0
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-demo_human_or_worm,base_3072,0.16287651658058167,0.957,0.9569996129965169,0.9140930182013325,0.957065706570657,0.957027312436999,2.4537,4075.463,32.196,5.0
-demo_human_or_worm,base_4096,0.16384389996528625,0.9578,0.9577998311993248,0.9156073248878988,0.9578,0.9578073249171987,2.4631,4059.873,32.073,5.0
-demo_human_or_worm,len2_4096,0.18908528983592987,0.9603,0.9602999964269997,0.9206355054107547,0.9603189403487777,0.960316565065041,2.4397,4098.869,32.381,5.0
-drosophila_enhancers_stark,base_2048,0.5024821758270264,0.8063583815028902,0.8020578064295778,0.6128689784273736,0.8132174828857293,0.7997983870967742,0.6037,1146.27,9.939,5.0
-drosophila_enhancers_stark,base_3072,0.5068560242652893,0.7861271676300579,0.7832300450404687,0.5690894417865989,0.7872602739726027,0.7818548387096774,0.6063,1141.384,9.896,5.0
-drosophila_enhancers_stark,base_4096,0.5579756498336792,0.7817919075144508,0.7808652396301476,0.5618914697689109,0.7805747559800595,0.7813172043010752,0.5983,1156.646,10.029,5.0
-drosophila_enhancers_stark,len2_2048,0.6097721457481384,0.7630057803468208,0.7616599462365592,0.5233198924731183,0.7616599462365592,0.7616599462365592,0.5953,1162.404,10.079,5.0
-drosophila_enhancers_stark,len2_3072,0.6083472371101379,0.7543352601156069,0.7532449008700612,0.5066039074015015,0.7530088169231285,0.7535954301075269,0.6012,1151.019,9.98,5.0
-drosophila_enhancers_stark,len2_4096,0.5776481032371521,0.7630057803468208,0.7612106113654726,0.5226273291049125,0.7618421052631579,0.7607862903225806,0.5959,1161.253,10.069,5.0
-dummy_mouse_enhancers_ensembl,base_2048,0.4924880266189575,0.7355371900826446,0.732448866777225,0.46530574245571493,0.7318181818181818,0.7334905660377358,0.1197,1010.557,8.352,5.0
-dummy_mouse_enhancers_ensembl,base_3072,0.5298280119895935,0.6942148760330579,0.6816921436189123,0.37145875644199666,0.6915584415584415,0.68007769145394,0.1309,924.197,7.638,5.0
-dummy_mouse_enhancers_ensembl,base_4096,0.5095120072364807,0.7355371900826446,0.721679125934445,0.45896301080635343,0.7405487804878048,0.7189234184239733,0.1185,1021.393,8.441,5.0
-dummy_mouse_enhancers_ensembl,len2_2048,0.5807737112045288,0.743801652892562,0.740325372101073,0.4807541572515868,0.7399115533443892,0.7408435072142063,0.1185,1021.321,8.441,5.0
-dummy_mouse_enhancers_ensembl,len2_3072,0.5577840805053711,0.7768595041322314,0.7753249432638746,0.5533336040673299,0.7747673782156541,0.7785793562708102,0.1187,1019.237,8.423,5.0
-dummy_mouse_enhancers_ensembl,len2_4096,0.5502648949623108,0.7603305785123967,0.758682346468606,0.5199902942604838,0.7582101806239737,0.7617924528301887,0.1195,1012.341,8.366,5.0
-human_enhancers_cohn,base_3072,0.5286217331886292,0.7478417266187051,0.747571248577904,0.4964151424232939,0.7486823947994081,0.7477336542318491,0.3382,8219.743,65.048,3.0
-human_enhancers_cohn,base_4096,0.5185958743095398,0.7568345323741007,0.7568344065185065,0.5136970171361614,0.7568501038533662,0.7568469132927035,0.3402,8172.163,64.672,3.0
-human_enhancers_cohn,len2_4096,0.5107852220535278,0.7550359712230216,0.7550093114785665,0.5103159172891526,0.7552326737595705,0.7550832654011879,0.337,8249.08,65.28,3.0
-human_enhancers_ensembl,base_2048,0.37799811363220215,0.8872457216661285,0.8870460847525706,0.7754025967473961,0.8885887012951792,0.8868159219752281,11.2253,1379.472,10.779,5.0
-human_enhancers_ensembl,base_3072,0.3765699565410614,0.8822085889570552,0.8818972942866747,0.766149124585147,0.8845156121621154,0.881638913048288,11.3024,1370.059,10.706,5.0
-human_enhancers_ensembl,base_4096,0.36600857973098755,0.8858895705521472,0.8856729766278577,0.772802040915429,0.8873671437605526,0.8854373067403338,11.2578,1375.496,10.748,5.0
-human_enhancers_ensembl,len2_2048,0.37206771969795227,0.8865353567969002,0.8862100131718725,0.7750726376423234,0.8891444371633609,0.8859348459410469,11.2264,1379.341,10.778,5.0
-human_enhancers_ensembl,len2_3072,0.3728547692298889,0.890603810138844,0.8903943082101395,0.7822724404439678,0.8921252299809576,0.8901497049219957,11.1803,1385.026,10.823,5.0
-human_enhancers_ensembl,len2_4096,0.3742740750312805,0.8899580238940911,0.8897679566032046,0.7808006336890359,0.8912660125477538,0.8895365365365031,11.1861,1384.309,10.817,5.0
-human_ensembl_regulatory,base_3072,0.2924354672431946,0.8944546303663472,0.8958219487174928,0.8415224291493578,0.8992124404743965,0.8938566933136989,6.374,4535.167,35.457,8.0
-human_ensembl_regulatory,base_4096,0.3027111291885376,0.8958729719445118,0.8976629255454892,0.8436574997931748,0.9014252229186607,0.895370867095771,6.2308,4639.354,36.271,8.0
-human_ensembl_regulatory,len2_4096,0.3339793086051941,0.8894039506002006,0.8905757554304999,0.8341683041840713,0.8949149042811354,0.8882931830246185,6.4544,4478.667,35.015,8.0
-human_nontata_promoters,base_3072,0.24520762264728546,0.9070282235749861,0.9067483185110006,0.8160075494294583,0.9063422405011909,0.9096721029449055,0.3186,11343.923,91.028,3.0
-human_nontata_promoters,base_4096,0.2452893853187561,0.9045379081350304,0.9042591740394723,0.8111354340061181,0.9039047815101544,0.907237499046389,0.2922,12366.199,99.231,3.0
-human_nontata_promoters,len2_4096,0.25029417872428894,0.9061981184283343,0.9059516744402738,0.8149210817270409,0.9057600138197697,0.9091681947608992,0.3367,10734.306,86.136,3.0
-human_ocr_ensembl,base_3072,0.5223153829574585,0.7482833600366217,0.7481930284444026,0.49715136303222757,0.7487887865364967,0.7483627590351063,2.084,8385.667,65.738,3.0
-human_ocr_ensembl,base_4096,0.516176164150238,0.7491416800183108,0.7491068190676342,0.49857142254867576,0.749376559714795,0.7491948959301715,2.1216,8237.024,64.573,3.0
-human_ocr_ensembl,len2_4096,0.5322734117507935,0.7426184481574731,0.7425405419710376,0.48574021513386767,0.743048232530884,0.7426921131470425,2.0691,8446.325,66.213,3.0

tables/results_demo_coding_vs_intergenomic_seqs.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-demo_coding_vs_intergenomic_seqs,base_3072,0.23370100557804108,0.9143,0.9142994643716523,0.8286761912329407,0.9143515624765606,0.9143246291940671,0.6978,14330.746,113.213,3.0
-demo_coding_vs_intergenomic_seqs,base_4096,0.2532884478569031,0.9092,0.9091980786313438,0.8185306611987274,0.9092977160340417,0.9092329477271637,0.6938,14414.377,113.874,3.0
-demo_coding_vs_intergenomic_seqs,len2_4096,0.2569104731082916,0.902,0.9019898030191061,0.8043435054811179,0.9022883063660782,0.9020552328837261,0.6791,14725.567,116.332,3.0

tables/results_demo_human_or_worm.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-demo_human_or_worm,base_3072,0.16287651658058167,0.957,0.9569996129965169,0.9140930182013325,0.957065706570657,0.957027312436999,2.4537,4075.463,32.196,5.0
-demo_human_or_worm,base_4096,0.16384389996528625,0.9578,0.9577998311993248,0.9156073248878988,0.9578,0.9578073249171987,2.4631,4059.873,32.073,5.0
-demo_human_or_worm,len2_4096,0.18908528983592987,0.9603,0.9602999964269997,0.9206355054107547,0.9603189403487777,0.960316565065041,2.4397,4098.869,32.381,5.0

tables/results_drosophila_enhancers_stark.csv

@@ -1,7 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-drosophila_enhancers_stark,base_2048,0.5024821758270264,0.8063583815028902,0.8020578064295778,0.6128689784273736,0.8132174828857293,0.7997983870967742,0.6037,1146.27,9.939,5.0
-drosophila_enhancers_stark,base_3072,0.5068560242652893,0.7861271676300579,0.7832300450404687,0.5690894417865989,0.7872602739726027,0.7818548387096774,0.6063,1141.384,9.896,5.0
-drosophila_enhancers_stark,base_4096,0.5579756498336792,0.7817919075144508,0.7808652396301476,0.5618914697689109,0.7805747559800595,0.7813172043010752,0.5983,1156.646,10.029,5.0
-drosophila_enhancers_stark,len2_2048,0.6097721457481384,0.7630057803468208,0.7616599462365592,0.5233198924731183,0.7616599462365592,0.7616599462365592,0.5953,1162.404,10.079,5.0
-drosophila_enhancers_stark,len2_3072,0.6083472371101379,0.7543352601156069,0.7532449008700612,0.5066039074015015,0.7530088169231285,0.7535954301075269,0.6012,1151.019,9.98,5.0
-drosophila_enhancers_stark,len2_4096,0.5776481032371521,0.7630057803468208,0.7612106113654726,0.5226273291049125,0.7618421052631579,0.7607862903225806,0.5959,1161.253,10.069,5.0

tables/results_dummy_mouse_enhancers_ensembl.csv

@@ -1,7 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-dummy_mouse_enhancers_ensembl,base_2048,0.4924880266189575,0.7355371900826446,0.732448866777225,0.46530574245571493,0.7318181818181818,0.7334905660377358,0.1197,1010.557,8.352,5.0
-dummy_mouse_enhancers_ensembl,base_3072,0.5298280119895935,0.6942148760330579,0.6816921436189123,0.37145875644199666,0.6915584415584415,0.68007769145394,0.1309,924.197,7.638,5.0
-dummy_mouse_enhancers_ensembl,base_4096,0.5095120072364807,0.7355371900826446,0.721679125934445,0.45896301080635343,0.7405487804878048,0.7189234184239733,0.1185,1021.393,8.441,5.0
-dummy_mouse_enhancers_ensembl,len2_2048,0.5807737112045288,0.743801652892562,0.740325372101073,0.4807541572515868,0.7399115533443892,0.7408435072142063,0.1185,1021.321,8.441,5.0
-dummy_mouse_enhancers_ensembl,len2_3072,0.5577840805053711,0.7768595041322314,0.7753249432638746,0.5533336040673299,0.7747673782156541,0.7785793562708102,0.1187,1019.237,8.423,5.0
-dummy_mouse_enhancers_ensembl,len2_4096,0.5502648949623108,0.7603305785123967,0.758682346468606,0.5199902942604838,0.7582101806239737,0.7617924528301887,0.1195,1012.341,8.366,5.0

tables/results_human_enhancers_cohn.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-human_enhancers_cohn,base_3072,0.5286217331886292,0.7478417266187051,0.747571248577904,0.4964151424232939,0.7486823947994081,0.7477336542318491,0.3382,8219.743,65.048,3.0
-human_enhancers_cohn,base_4096,0.5185958743095398,0.7568345323741007,0.7568344065185065,0.5136970171361614,0.7568501038533662,0.7568469132927035,0.3402,8172.163,64.672,3.0
-human_enhancers_cohn,len2_4096,0.5107852220535278,0.7550359712230216,0.7550093114785665,0.5103159172891526,0.7552326737595705,0.7550832654011879,0.337,8249.08,65.28,3.0

tables/results_human_enhancers_ensembl.csv

@@ -1,7 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-human_enhancers_ensembl,base_2048,0.37799811363220215,0.8872457216661285,0.8870460847525706,0.7754025967473961,0.8885887012951792,0.8868159219752281,11.2253,1379.472,10.779,5.0
-human_enhancers_ensembl,base_3072,0.3765699565410614,0.8822085889570552,0.8818972942866747,0.766149124585147,0.8845156121621154,0.881638913048288,11.3024,1370.059,10.706,5.0
-human_enhancers_ensembl,base_4096,0.36600857973098755,0.8858895705521472,0.8856729766278577,0.772802040915429,0.8873671437605526,0.8854373067403338,11.2578,1375.496,10.748,5.0
-human_enhancers_ensembl,len2_2048,0.37206771969795227,0.8865353567969002,0.8862100131718725,0.7750726376423234,0.8891444371633609,0.8859348459410469,11.2264,1379.341,10.778,5.0
-human_enhancers_ensembl,len2_3072,0.3728547692298889,0.890603810138844,0.8903943082101395,0.7822724404439678,0.8921252299809576,0.8901497049219957,11.1803,1385.026,10.823,5.0
-human_enhancers_ensembl,len2_4096,0.3742740750312805,0.8899580238940911,0.8897679566032046,0.7808006336890359,0.8912660125477538,0.8895365365365031,11.1861,1384.309,10.817,5.0

tables/results_human_ensembl_regulatory.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-human_ensembl_regulatory,base_3072,0.2924354672431946,0.8944546303663472,0.8958219487174928,0.8415224291493578,0.8992124404743965,0.8938566933136989,6.374,4535.167,35.457,8.0
-human_ensembl_regulatory,base_4096,0.3027111291885376,0.8958729719445118,0.8976629255454892,0.8436574997931748,0.9014252229186607,0.895370867095771,6.2308,4639.354,36.271,8.0
-human_ensembl_regulatory,len2_4096,0.3339793086051941,0.8894039506002006,0.8905757554304999,0.8341683041840713,0.8949149042811354,0.8882931830246185,6.4544,4478.667,35.015,8.0

tables/results_human_nontata_promoters.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-human_nontata_promoters,base_3072,0.24520762264728546,0.9070282235749861,0.9067483185110006,0.8160075494294583,0.9063422405011909,0.9096721029449055,0.3186,11343.923,91.028,3.0
-human_nontata_promoters,base_4096,0.2452893853187561,0.9045379081350304,0.9042591740394723,0.8111354340061181,0.9039047815101544,0.907237499046389,0.2922,12366.199,99.231,3.0
-human_nontata_promoters,len2_4096,0.25029417872428894,0.9061981184283343,0.9059516744402738,0.8149210817270409,0.9057600138197697,0.9091681947608992,0.3367,10734.306,86.136,3.0

tables/results_human_ocr_ensembl.csv

@@ -1,4 +0,0 @@
-task,model,eval_loss,eval_accuracy,eval_f1,eval_matthews_correlation,eval_precision,eval_recall,eval_runtime,eval_samples_per_second,eval_steps_per_second,epoch
-human_ocr_ensembl,base_3072,0.5223153829574585,0.7482833600366217,0.7481930284444026,0.49715136303222757,0.7487887865364967,0.7483627590351063,2.084,8385.667,65.738,3.0
-human_ocr_ensembl,base_4096,0.516176164150238,0.7491416800183108,0.7491068190676342,0.49857142254867576,0.749376559714795,0.7491948959301715,2.1216,8237.024,64.573,3.0
-human_ocr_ensembl,len2_4096,0.5322734117507935,0.7426184481574731,0.7425405419710376,0.48574021513386767,0.743048232530884,0.7426921131470425,2.0691,8446.325,66.213,3.0